Cucsat.G9858 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G9858
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Unknown protein
Location	ctg1673: 694824 .. 695942 (+)
RNA-Seq Expression	Cucsat.G9858
Synteny	Cucsat.G9858

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACATCTAGACAGGAGCCGTGTAAACATAACACTGAAATGAATCCCCCTTTTTCTCTATGTATCTGTTCACAATTCTGTTTCCCTGCAGAGTACTTCATTGGGTCTCATTTCACTATAAAATTCCAAATACAGTCTAGTCTAACTTCACCATAACCATGGATTTCAAAGCAGAGCTCAACACACAAATAACAGAAGAAGAAGATTGTTACTATGCTGAGATTAGGAAGCAGATCAGTCTACTTTTGACAGCATATGATGATGACGATGAGGTCGAACAGCTTCCCAAAACTGCAGCCAAACCAGGAGCAGAAGTTCGACAAAGAGATTGTTGGCCACAGCTAGAGAGAAATATGAGTTTGTGCCCAAATGGGAATGATTTTGATGAACCTGTTTGGCATGTAAATTCATGGGAGAATGGGAATGGAACGGGGGTTTTCATTCCTCAAGCAGTCAAATACAAAAAATATTGTGTTTTCAGTATGTTCCTATTTTAACTTTGGAGTTTCGTAATTATAAAGGTAATATTTAACATAACATAACATCACCTTATGTTTTGTCTTGCAGGAAGGTTGAGAAAGCATGAGAGAAAAGAGAAACACAGACAAAAGAACATCGAAACCGAGGACCATCCTTGTTTTTAAAAGGATAAATTGCAAAAAAATACCCCTCAAGTTTGTCCATGGTATAAAAAACATCCCTTTTCAAAAGCTACAACAATACCTTCTAACCTTTCATAATATGAATCCTACGAAAATTGAGACTTGAGACTTGAAACCACTGTGGTAGTGCTCGAATTTTAATTTTCGTTTCAAGCCACTTATAATTTTCTTAGGACCTTCTTCTAATAGATTTCTTCTACTGAAATTGAGGAAAAAATATGAATGGACAAAGGTAATATTGTAGAATTTGAAAGAAAATAAAACATAAAGTTGAGGGATATTTTTGTAATTTGACGTGTTAAAAAGTTGTATGTACCTTTGACATTCCCATATCCTGCTACCAAATGAATAACGACAAGGTCTTGTTCTCTTTGGACTTTCATCGATTCTCACTAACGATATCAAAATATGCTCACAACCAAAGTAAATTCCAAAAAACAGCACGTAAAAAATTACAAGT

Coding sequence (CDS)

ATGGATTTCAAAGCAGAGCTCAACACACAAATAACAGAAGAAGAAGATTGTTACTATGCTGAGATTAGGAAGCAGATCAGTCTACTTTTGACAGCATATGATGATGACGATGAGGTCGAACAGCTTCCCAAAACTGCAGCCAAACCAGGAGCAGAAGTTCGACAAAGAGATTGTTGGCCACAGCTAGAGAGAAATATGAGTTTGTGCCCAAATGGGAATGATTTTGATGAACCTGTTTGGCATGTAAATTCATGGGAGAATGGGAATGGAACGGGGGTTTTCATTCCTCAAGCAGTCAAATACAAAAAATATTGTGTTTTCAGAAGGTTGAGAAAGCATGAGAGAAAAGAGAAACACAGACAAAAGAACATCGAAACCGAGGACCATCCTTGTTTTTAA

Protein sequence

MDFKAELNTQITEEEDCYYAEIRKQISLLLTAYDDDDEVEQLPKTAAKPGAEVRQRDCWPQLERNMSLCPNGNDFDEPVWHVNSWENGNGTGVFIPQAVKYKKYCVFRRLRKHERKEKHRQKNIETEDHPCF

Homology

[Close]

BLAST of Cucsat.G9858 vs. NCBI nr
Match: XP_011655764.1 (uncharacterized protein LOC105435583 [Cucumis sativus] >KGN52059.1 hypothetical protein Csa_007739 [Cucumis sativus])

HSP 1 Score: 283 bits (723), Expect = 2.43e-96
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MDFKAELNTQITEEEDCYYAEIRKQISLLLTAYDDDDEVEQLPKTAAKPGAEVRQRDCWP 60
           MDFKAELNTQITEEEDCYYAEIRKQISLLLTAYDDDDEVEQLPKTAAKPGAEVRQRDCWP
Sbjct: 1   MDFKAELNTQITEEEDCYYAEIRKQISLLLTAYDDDDEVEQLPKTAAKPGAEVRQRDCWP 60

Query: 61  QLERNMSLCPNGNDFDEPVWHVNSWENGNGTGVFIPQAVKYKKYCVFRRLRKHERKEKHR 120
           QLERNMSLCPNGNDFDEPVWHVNSWENGNGTGVFIPQAVKYKKYCVFRRLRKHERKEKHR
Sbjct: 61  QLERNMSLCPNGNDFDEPVWHVNSWENGNGTGVFIPQAVKYKKYCVFRRLRKHERKEKHR 120

Query: 121 QKNIETEDHPCF 132
           QKNIETEDHPCF
Sbjct: 121 QKNIETEDHPCF 132

[Close]

BLAST of Cucsat.G9858 vs. NCBI nr
Match: XP_008446569.1 (PREDICTED: uncharacterized protein LOC103489264 [Cucumis melo])

HSP 1 Score: 243 bits (621), Expect = 9.84e-80
Identity = 115/132 (87.12%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MDFKAELNTQITEEEDCYYAEIRKQISLLLTAYDDDDEVEQLPKTAAKPGAEVRQRDCWP 60
           MDFKAELNTQITEEEDCYYAEIRKQI LLLTAYDDD+E  Q P+TAAKPGA+V+QRD WP
Sbjct: 58  MDFKAELNTQITEEEDCYYAEIRKQIILLLTAYDDDEE--QPPRTAAKPGAKVQQRDRWP 117

Query: 61  QLERNMSLCPNGNDFDEPVWHVNSWENGNGTGVFIPQAVKYKKYCVFRRLRKHERKEKHR 120
           Q++ N+SLCPNG DF+EPVWHVNSWENGNGTGVFIPQAVKYKKYCV RRLRKHERKEKHR
Sbjct: 118 QIKGNLSLCPNGKDFEEPVWHVNSWENGNGTGVFIPQAVKYKKYCVLRRLRKHERKEKHR 177

Query: 121 QKNIETEDHPCF 132
           QKNIETEDH CF
Sbjct: 178 QKNIETEDHSCF 187

[Close]

BLAST of Cucsat.G9858 vs. NCBI nr
Match: KAA0034537.1 (uncharacterized protein E6C27_scaffold65G005520 [Cucumis melo var. makuwa] >TYK09091.1 uncharacterized protein E5676_scaffold475G00810 [Cucumis melo var. makuwa])

HSP 1 Score: 196 bits (498), Expect = 2.44e-62
Identity = 91/106 (85.85%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 1   MDFKAELNTQITEEEDCYYAEIRKQISLLLTAYDDDDEVEQLPKTAAKPGAEVRQRDCWP 60
           MDFKAELNTQITEEEDCYYAEIRKQI LLLTAYDDD+E  Q P+TAAKPGA+V+QRD WP
Sbjct: 1   MDFKAELNTQITEEEDCYYAEIRKQIILLLTAYDDDEE--QPPRTAAKPGAKVQQRDRWP 60

Query: 61  QLERNMSLCPNGNDFDEPVWHVNSWENGNGTGVFIPQAVKYKKYCV 106
           Q++ N+SLCPNG DF+EPVWHVNSWENGNGTGVFIPQAVKYKKYCV
Sbjct: 61  QIKGNLSLCPNGKDFEEPVWHVNSWENGNGTGVFIPQAVKYKKYCV 104

[Close]

BLAST of Cucsat.G9858 vs. NCBI nr
Match: XP_022987842.1 (uncharacterized protein LOC111485239 [Cucurbita maxima])

HSP 1 Score: 192 bits (489), Expect = 1.21e-60
Identity = 92/120 (76.67%), Postives = 104/120 (86.67%), Query Frame = 0


Query: 1   MDFKAELNTQITEEEDCYYAEIRKQISLLLTAYDDDDEVEQLPKTAAKPGAEVRQRDCWP 60
           MDFKAELNTQ+ EE+D YYAEIRKQI LLLT YDDD++VE+ PKTAAK GAE   R C P
Sbjct: 1   MDFKAELNTQVAEEDDSYYAEIRKQIILLLTTYDDDEDVERPPKTAAKRGAEQSGR-CHP 60

Query: 61  QLERNMSLCPNGNDFDEPVWHVNSWENGNGTGVFIPQAVKYKKYCVFRRLRKHERKEKHR 120
           Q ERN+S C NGND +EPVWHVNSWENGNGTGVFIPQAV++K+Y +FRR+RKHERKEKHR
Sbjct: 61  QAERNLSWCLNGNDLEEPVWHVNSWENGNGTGVFIPQAVQFKRYSIFRRMRKHERKEKHR 119

[Close]

BLAST of Cucsat.G9858 vs. NCBI nr
Match: XP_022957510.1 (uncharacterized protein LOC111458884 [Cucurbita moschata] >KAG6601308.1 hypothetical protein SDJN03_06541, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187 bits (475), Expect = 1.69e-58
Identity = 92/120 (76.67%), Postives = 102/120 (85.00%), Query Frame = 0


Query: 1   MDFKAELNTQITEEEDCYYAEIRKQISLLLTAYDDDDEVEQLPKTAAKPGAEVRQRDCWP 60
           MDFKAELNTQ+ EE+D YYAEIRKQI LLLT YDDD++VE+ PKTAAK GAE   R   P
Sbjct: 1   MDFKAELNTQVAEEDDGYYAEIRKQIILLLTTYDDDEDVERPPKTAAKRGAEQSGRR-HP 60

Query: 61  QLERNMSLCPNGNDFDEPVWHVNSWENGNGTGVFIPQAVKYKKYCVFRRLRKHERKEKHR 120
           Q ERN+S C NGND + PVWHVNSWENGNGTGVFIPQAVKYK+Y +FRR+RKHERKEKHR
Sbjct: 61  QSERNLSWCLNGNDLEGPVWHVNSWENGNGTGVFIPQAVKYKRYSIFRRMRKHERKEKHR 119

[Close]

BLAST of Cucsat.G9858 vs. ExPASy TrEMBL
Match: A0A0A0KT55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608470 PE=4 SV=1)

HSP 1 Score: 283 bits (723), Expect = 1.18e-96
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0


Query: 1   MDFKAELNTQITEEEDCYYAEIRKQISLLLTAYDDDDEVEQLPKTAAKPGAEVRQRDCWP 60
           MDFKAELNTQITEEEDCYYAEIRKQISLLLTAYDDDDEVEQLPKTAAKPGAEVRQRDCWP
Sbjct: 1   MDFKAELNTQITEEEDCYYAEIRKQISLLLTAYDDDDEVEQLPKTAAKPGAEVRQRDCWP 60

Query: 61  QLERNMSLCPNGNDFDEPVWHVNSWENGNGTGVFIPQAVKYKKYCVFRRLRKHERKEKHR 120
           QLERNMSLCPNGNDFDEPVWHVNSWENGNGTGVFIPQAVKYKKYCVFRRLRKHERKEKHR
Sbjct: 61  QLERNMSLCPNGNDFDEPVWHVNSWENGNGTGVFIPQAVKYKKYCVFRRLRKHERKEKHR 120

Query: 121 QKNIETEDHPCF 132
           QKNIETEDHPCF
Sbjct: 121 QKNIETEDHPCF 132

[Close]

BLAST of Cucsat.G9858 vs. ExPASy TrEMBL
Match: A0A1S3BG13 (uncharacterized protein LOC103489264 OS=Cucumis melo OX=3656 GN=LOC103489264 PE=4 SV=1)

HSP 1 Score: 243 bits (621), Expect = 4.76e-80
Identity = 115/132 (87.12%), Postives = 123/132 (93.18%), Query Frame = 0


Query: 1   MDFKAELNTQITEEEDCYYAEIRKQISLLLTAYDDDDEVEQLPKTAAKPGAEVRQRDCWP 60
           MDFKAELNTQITEEEDCYYAEIRKQI LLLTAYDDD+E  Q P+TAAKPGA+V+QRD WP
Sbjct: 58  MDFKAELNTQITEEEDCYYAEIRKQIILLLTAYDDDEE--QPPRTAAKPGAKVQQRDRWP 117

Query: 61  QLERNMSLCPNGNDFDEPVWHVNSWENGNGTGVFIPQAVKYKKYCVFRRLRKHERKEKHR 120
           Q++ N+SLCPNG DF+EPVWHVNSWENGNGTGVFIPQAVKYKKYCV RRLRKHERKEKHR
Sbjct: 118 QIKGNLSLCPNGKDFEEPVWHVNSWENGNGTGVFIPQAVKYKKYCVLRRLRKHERKEKHR 177

Query: 121 QKNIETEDHPCF 132
           QKNIETEDH CF
Sbjct: 178 QKNIETEDHSCF 187

[Close]

BLAST of Cucsat.G9858 vs. ExPASy TrEMBL
Match: A0A5A7SZ32 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00810 PE=4 SV=1)

HSP 1 Score: 196 bits (498), Expect = 1.18e-62
Identity = 91/106 (85.85%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 1   MDFKAELNTQITEEEDCYYAEIRKQISLLLTAYDDDDEVEQLPKTAAKPGAEVRQRDCWP 60
           MDFKAELNTQITEEEDCYYAEIRKQI LLLTAYDDD+E  Q P+TAAKPGA+V+QRD WP
Sbjct: 1   MDFKAELNTQITEEEDCYYAEIRKQIILLLTAYDDDEE--QPPRTAAKPGAKVQQRDRWP 60

Query: 61  QLERNMSLCPNGNDFDEPVWHVNSWENGNGTGVFIPQAVKYKKYCV 106
           Q++ N+SLCPNG DF+EPVWHVNSWENGNGTGVFIPQAVKYKKYCV
Sbjct: 61  QIKGNLSLCPNGKDFEEPVWHVNSWENGNGTGVFIPQAVKYKKYCV 104

[Close]

BLAST of Cucsat.G9858 vs. ExPASy TrEMBL
Match: A0A6J1JBG9 (uncharacterized protein LOC111485239 OS=Cucurbita maxima OX=3661 GN=LOC111485239 PE=4 SV=1)

HSP 1 Score: 192 bits (489), Expect = 5.84e-61
Identity = 92/120 (76.67%), Postives = 104/120 (86.67%), Query Frame = 0


Query: 1   MDFKAELNTQITEEEDCYYAEIRKQISLLLTAYDDDDEVEQLPKTAAKPGAEVRQRDCWP 60
           MDFKAELNTQ+ EE+D YYAEIRKQI LLLT YDDD++VE+ PKTAAK GAE   R C P
Sbjct: 1   MDFKAELNTQVAEEDDSYYAEIRKQIILLLTTYDDDEDVERPPKTAAKRGAEQSGR-CHP 60

Query: 61  QLERNMSLCPNGNDFDEPVWHVNSWENGNGTGVFIPQAVKYKKYCVFRRLRKHERKEKHR 120
           Q ERN+S C NGND +EPVWHVNSWENGNGTGVFIPQAV++K+Y +FRR+RKHERKEKHR
Sbjct: 61  QAERNLSWCLNGNDLEEPVWHVNSWENGNGTGVFIPQAVQFKRYSIFRRMRKHERKEKHR 119

[Close]

BLAST of Cucsat.G9858 vs. ExPASy TrEMBL
Match: A0A6J1H0R7 (uncharacterized protein LOC111458884 OS=Cucurbita moschata OX=3662 GN=LOC111458884 PE=4 SV=1)

HSP 1 Score: 187 bits (475), Expect = 8.18e-59
Identity = 92/120 (76.67%), Postives = 102/120 (85.00%), Query Frame = 0


Query: 1   MDFKAELNTQITEEEDCYYAEIRKQISLLLTAYDDDDEVEQLPKTAAKPGAEVRQRDCWP 60
           MDFKAELNTQ+ EE+D YYAEIRKQI LLLT YDDD++VE+ PKTAAK GAE   R   P
Sbjct: 1   MDFKAELNTQVAEEDDGYYAEIRKQIILLLTTYDDDEDVERPPKTAAKRGAEQSGRR-HP 60

Query: 61  QLERNMSLCPNGNDFDEPVWHVNSWENGNGTGVFIPQAVKYKKYCVFRRLRKHERKEKHR 120
           Q ERN+S C NGND + PVWHVNSWENGNGTGVFIPQAVKYK+Y +FRR+RKHERKEKHR
Sbjct: 61  QSERNLSWCLNGNDLEGPVWHVNSWENGNGTGVFIPQAVKYKRYSIFRRMRKHERKEKHR 119

The following BLAST results are available for this feature:

BLAST of Cucsat.G9858 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G9858 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655764.1	2.43e-96	100.00	uncharacterized protein LOC105435583 [Cucumis sativus] >KGN52059.1 hypothetical ...	[more]
XP_008446569.1	9.84e-80	87.12	PREDICTED: uncharacterized protein LOC103489264 [Cucumis melo]	[more]
KAA0034537.1	2.44e-62	85.85	uncharacterized protein E6C27_scaffold65G005520 [Cucumis melo var. makuwa] >TYK0...	[more]
XP_022987842.1	1.21e-60	76.67	uncharacterized protein LOC111485239 [Cucurbita maxima]	[more]
XP_022957510.1	1.69e-58	76.67	uncharacterized protein LOC111458884 [Cucurbita moschata] >KAG6601308.1 hypothet...	[more]

BLAST of Cucsat.G9858 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT55	1.18e-96	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608470 PE=4 SV=1	[more]
A0A1S3BG13	4.76e-80	87.12	uncharacterized protein LOC103489264 OS=Cucumis melo OX=3656 GN=LOC103489264 PE=...	[more]
A0A5A7SZ32	1.18e-62	85.85	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1JBG9	5.84e-61	76.67	uncharacterized protein LOC111485239 OS=Cucurbita maxima OX=3661 GN=LOC111485239...	[more]
A0A6J1H0R7	8.18e-59	76.67	uncharacterized protein LOC111458884 OS=Cucurbita moschata OX=3662 GN=LOC1114588...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34956	OS05G0397300 PROTEIN	coord: 3..124
None	No IPR available	PANTHER	PTHR34956:SF1	SUBFAMILY NOT NAMED	coord: 3..124

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G9858.T1	Cucsat.G9858.T1	mRNA