Cucsat.G9534 (gene) Cucumber (B10) v3

Overview
NameCucsat.G9534
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionpre-mRNA-processing factor 17-like
Locationctg1673: 2120914 .. 2124451 (-)
RNA-Seq ExpressionCucsat.G9534
SyntenyCucsat.G9534
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTATTCTCTAGAATTACCCATAATTAAATTGAAAAAGATAATTTAATCTTTCCTCTTTTTTTGTTTTTTCTTTCTTTCTGAAAAATAGAGAAATGAAGGAGAGATTTCGTTTTTGAAATTTTGATTTATTATCAAATCGAAAATTCCGCACATAGTTTGGATTAATATCAACACTCTTCCCTTTGATTTGATCTCATCTTGCAACACTAAAACCCTAGAATCAGGTAATTGAATTTCTTCTACTGGGATTCCTTGTCTCTTCTTCTGATTCATCCTTTCTTTCATCGATTTGTCGGTTAAAGTTCGACCTTTGAATCTCTTCATTAGCTACAGAAGAAGGGACAAAGAAGAAGGTTTGCTTTGGTAGGGAAGAAATTGTGAAACTGCTTTAGGGTTTAAAGAAATAGTAGTACTGTACATTTTTTGTTCATTCAATTCCAGGAAGATTTGGTCTGAGTTGTGGCAAGAAGTCAATTCGGCTTCGAATCGTTCAGAGTATAAATCTGCGTTTTTCTCTGTGTTTCGCTGTTATAACTTCGTGGCAGTACAGTTATGGATCTTCTCCAGTCATACACAGATCAAAACGACGATGACGGAAGCCCTAAACAGCTTACATCTTCACCAGAAGCGTCTCCGCCTCGCCTTCTTCCCTCCAAAACCTCGGCGCCTAAGGTTGATGATACAATGTTAGCCCTCACGGTGGCTAATGCCAACCAAACCCTCTCGAAGCCGATAGACCCAACTCAGCATCTTGTTGCGTTCAACCCCACTTACGATCAACTATGGGCGCCCATTTATGGCCCATCTCATCCCTATGCCAAGGATGGAATTGCACAGGGAATGCGGAACCACAAGCTAGGGTTTGTGGAGAATGCGTCCATTGAGCCATTTGTTTTCGATGAGCAGTACAATACGTTCCATAAATACGGATATGCTGCTGACCCATCAGCTTCTGCTGGAAACAATTACATTGGGGATATGGAGGCTTTGGAGAAGAATGATGCCATTTCCGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGAAAGATTGAGAAAAAGAAAGAAATGAGTGAGAATGAAGATATGGAAGAGGAGGTGAACCCGGCTGAAGTTGATAATCCAGCTTCTGATGTTTGGTTGATGAAGAATAGGAAGAGTCCATGGTCTGGAAAGAAGGAAGGTCTGCAAACCGAGCTAACTGAAGAGCAGAAGAAATATGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACATCAGATAAGAGTACTTTTCATGGTAAAGAGGAGAGGGACTACCAGGGTAGATCTTGGATTGCACCACCAAAGGATGCCAAGGCCACGAATGATCATTGTTATATACCGAAAAGATTGGTGCATACATGGAGTGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGCCATTTAATTCTTTCAGCTGGTATGGACACCAAAGTGAAGATATGGGATGTGTTCAATTCTGGTAAATGTATGAGAACCTACATGGGTCACTCTCAAGCGGTTCGGGACATTTCATTTTGTAATGATGGATCTAAGTTTCTGACCGCCGGATATGATAAAAAGATCAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCTACCGGGAAAATTCCTTATGTAGTTAAGCTTAATCCTGATGATGATAAGCAGAATATCTTGCTGGCAGGGATGAGTGATAAGAAAATCGTTCAATGGGATATGAACACAGGACAGATTACACAGGAGTATGATCAACATTTAGGAGCAGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTTACATCGAGCGATGACAAGTCTCTCCGTGTTTGGGAATTTGGAATTCCTGTTGTTATTAAGTATATCAGTGAGCCTCACATGCATTCCATGCCCTCTATTTCTGTACATCCCAATACGAATTGGCTTGCAGCACAGAGTTTAGACAATCAAATTCTTATTTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAGAAGAGGTTTGCTGGGCACATTGTGGCAGGATATGCTTGTCAGGTTAATTTTTCTCCAGATGGACGTTTTGTCATGTCTGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTAAAGTGTCACGAGGGTGTATGCATTGGGTGTGAGTGGCATCCATTGGAGCAAAGTAAAGTAGCAACATGCGGATGGGATGGACTGATAAAGTATTGGTAAGTAAATCCCTTTACCTTGGTCTGATACTTTTTTATATTTTGCTTTAAACATTTAATAGGCCATGCTAATTCATGTTTCTTTTACCCTTCAGCATGGTATATTTCTTTTAGAGATAGTTCTGCAGTGAGGGTCAACTATCTCGGGGTTTTGTTGATTATGTGGTGTTCTTTATGACTCTTTGTATGTATTAGTATCTGGATGCAACTTTGGTTATCTTCTTGCATGTTACATCTTGTTAATTAGACTCTGACCCAAAACGACTGGCTTAAAGATTTCAGCTATTTTCTGTTGTTTATATGAACCCTTAGCCGTCATAGTAAATATGAATTATGCTTTGGAGGTTGCTGACAGCCTACGTTTTCCTGTTAGCGAATTCATTGTTCATAGTAACTGTTGATGATTTCACATTGTGGCCAAAGCCTTCATGCCTTGTTGGTATTGCAATAGCGGGAACCTAACAATGTTTCTTCCTTTGTGGGCTTGAGTATTGACCATAACCGGCTTTGCCAATATCTTTTAGTTAGTCATTACAATTGTGTCCTTGTGCACTAAAATTCATTCTGTTATTTCACATGTGAGTCTGTGTAGCTGAAGGTAGGGTATCATTCTGGTTGGTTTTCTTAATCGGTTTAAATATCCATGGCCATTACTATATATAATCTACTTGTAATGCATCAGCCTCTGCACTCTTTGTCATGTGGTATGCAATCGGTCCTCATTGTAATGTTGATGACGAACAATGCATCTTTACTATTTAATTTTGACACGTGGTGTTTGAATGAGACTTTTGGTTTGAAGAACTTCATCTTTTGGGGATGAGATTAGTTGTGTGGATTGATCTTTTTTCTGCTCTCGCTATTTTATACTGCAGAAAATTAAATTTTGTTTGTGGAATGCAGGGACTAGATTTAAGGCTGAGATCATCTTTGGAAGCCACAAGGACAAGGAAATTTCTGGGTGAAAATCTGCCCTTAAAGAATGAGTATATCTTAACTTGAATTTTGTGTTAGATCAAATCACCTTAGTTAAGTTATCCCAATGACATTGTACTGTTAGCTTCTTACATTTTTGTATACTGAATTAATACAACATTACTTCGTTCAACTTTATGGTGTAGTTCATTTTCCCTCACCTGTTTTGGATTTGTGTAAAACCGTTACTCACTAAAAAGGAAAAAAAGAAAACAAGTTTGATTTGATTGGGCATCTGGTATTAAGCATTTTGAGAATTATAGATTTGAGG

Coding sequence (CDS)

ATGGATCTTCTCCAGTCATACACAGATCAAAACGACGATGACGGAAGCCCTAAACAGCTTACATCTTCACCAGAAGCGTCTCCGCCTCGCCTTCTTCCCTCCAAAACCTCGGCGCCTAAGGTTGATGATACAATGTTAGCCCTCACGGTGGCTAATGCCAACCAAACCCTCTCGAAGCCGATAGACCCAACTCAGCATCTTGTTGCGTTCAACCCCACTTACGATCAACTATGGGCGCCCATTTATGGCCCATCTCATCCCTATGCCAAGGATGGAATTGCACAGGGAATGCGGAACCACAAGCTAGGGTTTGTGGAGAATGCGTCCATTGAGCCATTTGTTTTCGATGAGCAGTACAATACGTTCCATAAATACGGATATGCTGCTGACCCATCAGCTTCTGCTGGAAACAATTACATTGGGGATATGGAGGCTTTGGAGAAGAATGATGCCATTTCCGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGAAAGATTGAGAAAAAGAAAGAAATGAGTGAGAATGAAGATATGGAAGAGGAGGTGAACCCGGCTGAAGTTGATAATCCAGCTTCTGATGTTTGGTTGATGAAGAATAGGAAGAGTCCATGGTCTGGAAAGAAGGAAGGTCTGCAAACCGAGCTAACTGAAGAGCAGAAGAAATATGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACATCAGATAAGAGTACTTTTCATGGTAAAGAGGAGAGGGACTACCAGGGTAGATCTTGGATTGCACCACCAAAGGATGCCAAGGCCACGAATGATCATTGTTATATACCGAAAAGATTGGTGCATACATGGAGTGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGCCATTTAATTCTTTCAGCTGGTATGGACACCAAAGTGAAGATATGGGATGTGTTCAATTCTGGTAAATGTATGAGAACCTACATGGGTCACTCTCAAGCGGTTCGGGACATTTCATTTTGTAATGATGGATCTAAGTTTCTGACCGCCGGATATGATAAAAAGATCAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCTACCGGGAAAATTCCTTATGTAGTTAAGCTTAATCCTGATGATGATAAGCAGAATATCTTGCTGGCAGGGATGAGTGATAAGAAAATCGTTCAATGGGATATGAACACAGGACAGATTACACAGGAGTATGATCAACATTTAGGAGCAGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTTACATCGAGCGATGACAAGTCTCTCCGTGTTTGGGAATTTGGAATTCCTGTTGTTATTAAGTATATCAGTGAGCCTCACATGCATTCCATGCCCTCTATTTCTGTACATCCCAATACGAATTGGCTTGCAGCACAGAGTTTAGACAATCAAATTCTTATTTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAGAAGAGGTTTGCTGGGCACATTGTGGCAGGATATGCTTGTCAGGTTAATTTTTCTCCAGATGGACGTTTTGTCATGTCTGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTAAAGTGTCACGAGGGTGTATGCATTGGGTGTGAGTGGCATCCATTGGAGCAAAGTAAAGTAGCAACATGCGGATGGGATGGACTGATAAAGTATTGGGACTAG

Protein sequence

MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKPIDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYNTFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDMEEEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKGEVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Homology
[Close]
BLAST of Cucsat.G9534 vs. ExPASy Swiss-Prot
Match: O60508 (Pre-mRNA-processing factor 17 OS=Homo sapiens OX=9606 GN=CDC40 PE=1 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 2.2e-153
Identity = 284/575 (49.39%), Postives = 375/575 (65.22%), Query Frame = 0 

Query: 20  LTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKPIDPTQHLVAFNPTYDQLWA 79
           LT SP +S P L  +  SAP+V            +      +DP    V +NPTY+ ++A
Sbjct: 40  LTKSP-SSKPSLAVAVDSAPEV--------AVKEDLETGVHLDPAVKEVQYNPTYETMFA 99

Query: 80  PIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYNTFHKYGYAADPSA---SAG 139
           P +GP +P+    +A   RN   G+ E A I  F+F++Q  TF  YGYA DPS       
Sbjct: 100 PEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDPSLDNHQVS 159

Query: 140 NNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDMEEEVNPAEVDNPASDVW 199
             YIG +E  EKN  ++V+     E  ++K EK+K+  EN+              AS++ 
Sbjct: 160 AKYIGSVEEAEKNQGLTVF-----ETGQKKTEKRKKFKEND--------------ASNI- 219

Query: 200 LMKNRKSPWSG--KKEGLQTELTEEQKKYAEEYAK--KKGEEKGGEKGEVTSDKSTFHGK 259
                  PW+    ++ +     EEQK+  E  AK  KKG+++  + GE   +K+  H K
Sbjct: 220 --DGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGE---EKTILHVK 279

Query: 260 EERDYQGRSWIAPPKD------AKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLI 319
           E  DYQGRS++  P+D      +    + CY+PK+ +H WSGHTKGVSA+R FP  GHL+
Sbjct: 280 EMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLL 339

Query: 320 LSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETG 379
           LS  MD K+K+W+V+   +C+RT++GHS+AVRDI F   G++FL+A YD+ +K WDTETG
Sbjct: 340 LSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETG 399

Query: 380 QVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTI 439
           Q IS F+  K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+ +G+I QEYD+HLGAVNTI
Sbjct: 400 QCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTI 459

Query: 440 TFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQ 499
            FVD NRRFV++SDDKSLRVWE+ IPV  KYI+EP MHSMP++++ PN  WLA QS+DNQ
Sbjct: 460 VFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQ 519

Query: 500 ILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFR 559
           ILI+  + RF+LNKKK F GH+VAGYACQV+FSPD  +V+SGDG GK   WDWKT K++ 
Sbjct: 520 ILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYS 579

Query: 560 TLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
             K H+ VCIG  WHP E SKV TCGWDGLIK WD
Sbjct: 580 RFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579

[Close]
BLAST of Cucsat.G9534 vs. ExPASy Swiss-Prot
Match: Q9DC48 (Pre-mRNA-processing factor 17 OS=Mus musculus OX=10090 GN=Cdc40 PE=2 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 4.2e-152
Identity = 286/589 (48.56%), Postives = 376/589 (63.84%), Query Frame = 0 

Query: 15  GSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVA--NANQTLSKP-------IDPTQ 74
           GS     S     P     S     K     L+LTVA  +A +   K        +DP  
Sbjct: 17  GSESDSDSEGSRCPLPAADSLMHLTKSPSAKLSLTVAVDSAPEVAVKEDLETGVHLDPAV 76

Query: 75  HLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYNTFHKY 134
             V +NPTY+ ++AP +GP +P+    +A   RN   G+ E A I  F+F++Q  TF  Y
Sbjct: 77  KEVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRRTFATY 136

Query: 135 GYAADPSA---SAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDMEEE 194
           GYA DPS         YIG +E  EKN  ++V+     E  ++K EK+K+  EN+     
Sbjct: 137 GYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVF-----ETGQKKTEKRKKFKEND----- 196

Query: 195 VNPAEVDNPASDVWLMKNRKSPWSG--KKEGLQTELTEEQKKYAEEYAK--KKGEEKGGE 254
                    AS++        PW+    ++ +     EEQK+  E  AK  KKG+++  +
Sbjct: 197 ---------ASNI---DGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEK 256

Query: 255 KGEVTSDKSTFHGKEERDYQGRSWIAPPKD------AKATNDHCYIPKRLVHTWSGHTKG 314
            GE   +K+  H KE  DYQGRS++  P+D      +    + CY+PK+ +H WSGHTKG
Sbjct: 257 PGE---EKTILHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWSGHTKG 316

Query: 315 VSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTA 374
           VSA+R FP  GHL+LS  MD K+K+W+V+   +C+RT++GHS+AVRDI F   G++FL+A
Sbjct: 317 VSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFLSA 376

Query: 375 GYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQI 434
            YD+ +K WDTETGQ IS F+  K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+ +G+I
Sbjct: 377 AYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEI 436

Query: 435 TQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVH 494
            QEYD+HLGAVNTI FVD NRRFV++SDDKSLRVWE+ IPV  KYI+EP MHSMP++++ 
Sbjct: 437 VQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLS 496

Query: 495 PNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEG 554
           PN  WLA QS+DNQILI+  + RF+LNKKK F GH+VAGYACQV+FSPD  +V+SGDG G
Sbjct: 497 PNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNG 556

Query: 555 KCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
           K   WDWKT K++   K H+ VCIG  WHP E SKV TCGWDGLIK WD
Sbjct: 557 KLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579

[Close]
BLAST of Cucsat.G9534 vs. ExPASy Swiss-Prot
Match: O43071 (Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp17 PE=1 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.5e-101
Identity = 219/594 (36.87%), Postives = 312/594 (52.53%), Query Frame = 0 

Query: 14  DGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKPIDPTQHLVAFNPT 73
           D   ++ + SP   P  LL ++  AP V D        N    L          +A N  
Sbjct: 9   DSEEQENSQSPNIQP--LLHTENLAPAVVD--------NVKDDLIVSKGGNSRELARNVP 68

Query: 74  YDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYNTFHKYGYAADPSA 133
            +++  P  GP++P+        ++N   G+ E   +  FVF+++        Y A+  A
Sbjct: 69  VNEMVQPALGPANPFVTKE-QDSIKNSITGYAEREYVPNFVFNQE--------YYANTHA 128

Query: 134 SAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDMEEEVNPAEVDNPAS 193
             G     D EA    D             KRK +K KE  E+       +P+ ++   +
Sbjct: 129 IYGKRNFDDNEATTSTDL------------KRKSQKIKERREDPG-----DPSILEGDGA 188

Query: 194 DVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKGEV----------- 253
                   K PW+G     Q+    E  +Y E  +     EK  E   +           
Sbjct: 189 -------YKGPWAGYGSE-QSSSPLEYSEYEEVESLDVKSEKDTESNNLGQNELLKEQLA 248

Query: 254 TSDKSTFHGKEER--------DYQGRSWIAPPKDA------KATNDHCYIPKRLVHTWSG 313
           T +  T   KEE         DYQ RS++  P D       +     CYIPK+ + TW G
Sbjct: 249 TPEVETHRSKEETILHKDRLFDYQNRSYMHVPNDVGINLSEEPGEQTCYIPKKHIFTWKG 308

Query: 314 HTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSK 373
           HTKG+S +RFFP  GHL+LS  MD ++KIW+V++    +RT+ GH++ +RD+SF  DG  
Sbjct: 309 HTKGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDGRS 368

Query: 374 FLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMN 433
           FL+  +DK IK WDTE G+ ++ F++ ++   VK   D DK N  LAG +DK+I+Q+D+ 
Sbjct: 369 FLSTSFDKTIKLWDTELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFDIR 428

Query: 434 TGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPS 493
           +  I Q YD HLG +N+ITF++N +RFVT+SDD S+R WE+G PV IK++++  MHSMP 
Sbjct: 429 SPDIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRFWEYGTPVPIKFVADIAMHSMPR 488

Query: 494 ISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSG 553
           +++ PN   +A QSLDN I +YS  E+++ NKKK F G+  +GY+ +V FSPDGRFV SG
Sbjct: 489 VALRPNGKSIACQSLDNCIYVYSAYEKYRQNKKKVFKGYSCSGYSLEVGFSPDGRFVFSG 548

Query: 554 DGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG-WDGLIKYWD 582
           D  G   FWDWKTCK+   L  H G      +HP E SKVAT    DG IKYWD
Sbjct: 549 DSSGNACFWDWKTCKLMAKLPAHSGPVQSMAFHPQETSKVATSSIVDGSIKYWD 558

[Close]
BLAST of Cucsat.G9534 vs. ExPASy Swiss-Prot
Match: P40968 (Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CDC40 PE=1 SV=2)

HSP 1 Score: 271.2 bits (692), Expect = 2.8e-71
Identity = 146/462 (31.60%), Postives = 247/462 (53.46%), Query Frame = 0 

Query: 130 DPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDMEEEVNPAEVD 189
           D S+ +  N+       EK +  +++    +E     I K+K      +++      + D
Sbjct: 8   DTSSDSDLNFDEGKSVHEKKNG-NLHEDTSYEPSSNNIHKRKSHFTKSELKRRRKTRKGD 67

Query: 190 NPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKGEVTSDKSTF 249
            P    W        WS   +   ++ +E QK+  + +     E+    +     + S F
Sbjct: 68  GP----W------GSWSSSDDE-TSQASETQKEDQDIFVHALAEDNLDSEQIEVEEVSHF 127

Query: 250 HGKEERDYQGRSWIAPPKDA------KATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHG 309
           +GK E+DYQGR ++ PP D       +  +  CY+PK+++  + GH +G +A++F PK G
Sbjct: 128 YGKSEKDYQGRGYLYPPNDVDVDLREERISFRCYLPKKVIRNYPGHPEGTTALKFLPKTG 187

Query: 310 HLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDT 369
           HLILS G D  +KIWD ++  +C+R + GH++ ++ + F  D   FL++ +D+ +K WDT
Sbjct: 188 HLILSGGNDHTIKIWDFYHDYECLRDFQGHNKPIKALRFTEDCQSFLSSSFDRSVKIWDT 247

Query: 370 ETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQ---ITQEYDQHL 429
           ETG+V +       P  V+  P +  +   + G+S+ KI+ +D    +   + Q YD HL
Sbjct: 248 ETGKVKTRLHLNSTPADVESRPTNPHE--FIVGLSNSKILHYDDRVSENQGLVQTYDHHL 307

Query: 430 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 489
            ++  + +  +  +F++SS+DK++R+WE  I V IK IS+   HSMP ++VHP+ N+  A
Sbjct: 308 SSILALKYFPDGSKFISSSEDKTVRIWENQINVPIKQISDTAQHSMPFLNVHPSQNYFCA 367

Query: 490 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 549
           QS+DN+I  +S + +++ + KK F GH  AGY   + FS DGR++ SGD + + + WDW 
Sbjct: 368 QSMDNRIYSFSLKPKYKRHPKKIFKGHSSAGYGISLAFSGDGRYICSGDSKSRLFTWDWN 427

Query: 550 TCKVFRTLKCHEGVCI-GCEWHPLEQSKVATCGWDGLIKYWD 582
           T ++   +K      I   +WHP E SKV   G  G I   D
Sbjct: 428 TSRLLNNIKIPGNKPITQVDWHPQETSKVICSGAAGKIYVCD 455

[Close]
BLAST of Cucsat.G9534 vs. ExPASy Swiss-Prot
Match: E9Q349 (WD repeat-containing protein 25 OS=Mus musculus OX=10090 GN=Wdr25 PE=2 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.7e-44
Identity = 95/313 (30.35%), Postives = 165/313 (52.72%), Query Frame = 0 

Query: 278 IPKRLVHTWSGHTKGVSAIRFFPK--HGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQ 337
           +PK+++    GH   V++I++ P     H++LSA MD   K+W+  +SG C++TY  HS+
Sbjct: 225 VPKKVLFHLRGHRGPVNSIQWCPVFCKSHMLLSASMDKTFKVWNAVDSGHCLQTYSVHSE 284

Query: 338 AVRDISFCNDGSKFLTAGYDKKIKYWDTETG-QVISTFSTGKIPYVVKLNPDDDKQNILL 397
           AVR   +   G + L+ G+D  +   D ETG QV S  S  ++   +K +P D   N+ L
Sbjct: 285 AVRAARWSPCGRRILSGGFDFALHLTDLETGTQVFSGQSDFRVT-TLKFHPKD--HNVFL 344

Query: 398 AGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVW 457
            G    +I  WDM TG++ + Y   +     I F+     F++S+D       D+++  W
Sbjct: 345 CGGFSSEIKAWDMRTGKVVKGYKATIQQTLDILFLQEGSEFLSSTDASTRDSADRTIIAW 404

Query: 458 EFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 517
           +F     I        ++ PS+++HP      AQ+  N + ++S+   +++++++R+ GH
Sbjct: 405 DFRTAAKISNQIFHERYTCPSLALHPREPVFLAQTNGNYLALFSSVWPYRMSRRRRYEGH 464

Query: 518 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSK 577
            V GYA     SP G  +++G  +G+   + ++T     TL+ H   C+G  +HP+  S 
Sbjct: 465 KVEGYAVGCECSPCGDLLVTGSADGRVLMFSFRTASRACTLQGHTQACLGTTYHPVLPSV 524

Query: 578 VATCGWDGLIKYW 581
           + TC W G IK W
Sbjct: 525 LGTCSWGGDIKIW 534

[Close]
BLAST of Cucsat.G9534 vs. NCBI nr
Match: XP_011655627.1 (pre-mRNA-processing factor 17 isoform X1 [Cucumis sativus] >KGN51808.1 hypothetical protein Csa_009274 [Cucumis sativus])

HSP 1 Score: 1205 bits (3117), Expect = 0.0
Identity = 581/581 (100.00%), Postives = 581/581 (100.00%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180
           TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Cucsat.G9534 vs. NCBI nr
Match: XP_004135243.1 (pre-mRNA-processing factor 17 isoform X2 [Cucumis sativus])

HSP 1 Score: 1202 bits (3111), Expect = 0.0
Identity = 580/580 (100.00%), Postives = 580/580 (100.00%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180
           TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of Cucsat.G9534 vs. NCBI nr
Match: XP_008446211.1 (PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis melo] >ADN33838.1 pre-mRNA splicing factor [Cucumis melo subsp. melo])

HSP 1 Score: 1202 bits (3109), Expect = 0.0
Identity = 578/581 (99.48%), Postives = 581/581 (100.00%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180
           TFHKYGYAADPSASAGNNYIGDMEAL+KNDAISVYNIPQHEQKKRKIEKKKEMSENEDME
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Cucsat.G9534 vs. NCBI nr
Match: XP_008446212.1 (PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis melo] >KAA0034318.1 pre-mRNA-processing factor 17 isoform X2 [Cucumis melo var. makuwa] >TYK15602.1 pre-mRNA-processing factor 17 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 1199 bits (3103), Expect = 0.0
Identity = 577/580 (99.48%), Postives = 580/580 (100.00%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180
           TFHKYGYAADPSASAGNNYIGDMEAL+KNDAISVYNIPQHEQKKRKIEKKKEMSENEDME
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of Cucsat.G9534 vs. NCBI nr
Match: XP_038893410.1 (pre-mRNA-processing factor 17 isoform X1 [Benincasa hispida])

HSP 1 Score: 1191 bits (3082), Expect = 0.0
Identity = 572/581 (98.45%), Postives = 580/581 (99.83%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180
           TFHKYGYAADPSASAGNNYIGDMEAL+KNDAISVYNIPQHEQKKRKIEKKKEM+ENED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMNENEDVE 180

Query: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           E++N AEVDNPA+DVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EDLNTAEVDNPATDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Cucsat.G9534 vs. ExPASy TrEMBL
Match: A0A0A0KQ97 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G601580 PE=4 SV=1)

HSP 1 Score: 1205 bits (3117), Expect = 0.0
Identity = 581/581 (100.00%), Postives = 581/581 (100.00%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180
           TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Cucsat.G9534 vs. ExPASy TrEMBL
Match: E5GBJ7 (Pre-mRNA splicing factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 1202 bits (3109), Expect = 0.0
Identity = 578/581 (99.48%), Postives = 581/581 (100.00%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180
           TFHKYGYAADPSASAGNNYIGDMEAL+KNDAISVYNIPQHEQKKRKIEKKKEMSENEDME
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Cucsat.G9534 vs. ExPASy TrEMBL
Match: A0A1S3BFC4 (pre-mRNA-processing factor 17 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489012 PE=4 SV=1)

HSP 1 Score: 1202 bits (3109), Expect = 0.0
Identity = 578/581 (99.48%), Postives = 581/581 (100.00%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180
           TFHKYGYAADPSASAGNNYIGDMEAL+KNDAISVYNIPQHEQKKRKIEKKKEMSENEDME
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Cucsat.G9534 vs. ExPASy TrEMBL
Match: A0A5D3CVQ9 (Pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G00990 PE=4 SV=1)

HSP 1 Score: 1199 bits (3103), Expect = 0.0
Identity = 577/580 (99.48%), Postives = 580/580 (100.00%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180
           TFHKYGYAADPSASAGNNYIGDMEAL+KNDAISVYNIPQHEQKKRKIEKKKEMSENEDME
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of Cucsat.G9534 vs. ExPASy TrEMBL
Match: A0A1S3BE12 (pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489012 PE=4 SV=1)

HSP 1 Score: 1199 bits (3103), Expect = 0.0
Identity = 577/580 (99.48%), Postives = 580/580 (100.00%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180
           TFHKYGYAADPSASAGNNYIGDMEAL+KNDAISVYNIPQHEQKKRKIEKKKEMSENEDME
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
           EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

The following BLAST results are available for this feature:
BLAST of Cucsat.G9534 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O605082.2e-15349.39Pre-mRNA-processing factor 17 OS=Homo sapiens OX=9606 GN=CDC40 PE=1 SV=1[more]
Q9DC484.2e-15248.56Pre-mRNA-processing factor 17 OS=Mus musculus OX=10090 GN=Cdc40 PE=2 SV=1[more]
O430711.5e-10136.87Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
P409682.8e-7131.60Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ... [more]
E9Q3491.7e-4430.35WD repeat-containing protein 25 OS=Mus musculus OX=10090 GN=Wdr25 PE=2 SV=1[more]
BLAST of Cucsat.G9534 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011655627.10.0100.00pre-mRNA-processing factor 17 isoform X1 [Cucumis sativus] >KGN51808.1 hypotheti... [more]
XP_004135243.10.0100.00pre-mRNA-processing factor 17 isoform X2 [Cucumis sativus][more]
XP_008446211.10.099.48PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis melo] >ADN33838.1 p... [more]
XP_008446212.10.099.48PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis melo] >KAA0034318.1... [more]
XP_038893410.10.098.45pre-mRNA-processing factor 17 isoform X1 [Benincasa hispida][more]
BLAST of Cucsat.G9534 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQ970.0100.00WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G... [more]
E5GBJ70.099.48Pre-mRNA splicing factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
A0A1S3BFC40.099.48pre-mRNA-processing factor 17 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489012... [more]
A0A5D3CVQ90.099.48Pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A1S3BE120.099.48pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489012... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 157..177
NoneNo IPR availableCOILSCoilCoilcoord: 209..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..30
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 286..320
score: 10.706503
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 416..448
score: 10.495596
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 548..581
score: 8.623787
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 330..367
score: 11.5765
NoneNo IPR availableCDDcd00200WD40coord: 282..581
e-value: 4.04152E-70
score: 226.062
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 306..320
score: 33.9
coord: 435..449
score: 29.36
coord: 349..363
score: 29.88
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 409..448
e-value: 2.6E-6
score: 37.0
coord: 323..362
e-value: 4.4E-10
score: 49.5
coord: 497..538
e-value: 0.14
score: 21.2
coord: 365..406
e-value: 3.6
score: 13.5
coord: 452..491
e-value: 10.0
score: 10.6
coord: 279..319
e-value: 6.9E-9
score: 45.5
coord: 541..581
e-value: 3.5E-6
score: 36.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 544..581
e-value: 0.092
score: 13.7
coord: 281..319
e-value: 4.7E-6
score: 27.2
coord: 410..447
e-value: 0.0013
score: 19.5
coord: 503..538
e-value: 0.029
score: 15.2
coord: 324..362
e-value: 4.9E-6
score: 27.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 330..371
score: 15.420926
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 548..581
score: 8.570195
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 286..320
score: 12.881143
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 416..448
score: 12.613797
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 266..581
e-value: 1.8E-96
score: 325.0
IPR032847Pre-mRNA-processing factor 17PANTHERPTHR43979PRE-MRNA-PROCESSING FACTOR 17coord: 48..581
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 306..320
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 277..581

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G9534.T1Cucsat.G9534.T1mRNA
Cucsat.G9534.T2Cucsat.G9534.T2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0071013 catalytic step 2 spliceosome
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding