Cucsat.G9475 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G9475
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	protein CRABS CLAW
Location	ctg1673: 1124837 .. 1127228 (-)
RNA-Seq Expression	Cucsat.G9475
Synteny	Cucsat.G9475

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTATTATTCCATTTTCCAACAACACACTTACTTTGTCTTTTTCTTCTTCGCCTTCTCTTTAAAACCCTCTCAATATTTCCTAATTTTAATTCCATCATCATCATCATCTTCTTATTCTTCTTCTTCTTCTTCTTCTTCTCATTCCATTGTTTTACAAGAAAGAAAAAAAGAAGACTAATTCATTAATGAGTAACTCCGAAGACAAATCTTCCATGGCTGATCTGGTTCAACCTTCTGAGCATTTCTGTTATGTCAAATGCAACTTTTGTAACACTGTTCTTGCGGTATATTTTATTGACCTGTTCATATAATACTAAGTTTACTACAATCTGTCAACTTATTAGTGTATGTTTGTGAGTAATTTGAATAGATACATGAGATAATATTTTGTGTTATATGAACTATATTCCATATATATGTGTATGAATTATGAATGAATGAATTTTATTTTTGGATTTTGAAGGTTGGGATTCCATGCAGACATTGGTTGGATACGGTGACAGTGAAATGTGGTCATTGTAGTAATCTCTCTTTTTTGAGCACAAGACCTCCTTTACAAGGCCAATGCATTGATCATCCTCTAACTTTTCAGGTTTAGGGAGATTTTTAGTTTCTTTAAATTAAAAAGAAACGTTATTATATATATATATATATTATCCTAACTAATTAATTACATTTACAAATAATATAGTCTCAGGTTGGATTCTCCAATAATGATCATATTCGAAAGGGTGCTTCCACATCTTCCACTTCCACTGCCTCTTCAATCACAAATGATTCTCCAAATTTTGTTGTCAAACGTATGTATAATTTCATTATGATATTCACATTTTTTTTGGAAACTAATAGAAATTATATGTAAAACAACTTTGAAGTAGAAGTGATCTATAAGTTTGATTTTGAAAAACCAAAAACTAGAAACCAAGACAACACTGTTTCTTTAATTTTTCAAAATTTTCTATCTAAAAAATTGAACTTTAAATAATAATTTGGAATTCCAAATATGTATTCTTTTTTAGTTTTGCTTGAACTTGGAAACACTCATAAAATAACAAAACATATTTATAATAGATGGCTATTAAAGAAGGGTTTAAGTACTCATGAAAATATAATATGTAATTTTATCATCACCCATGGGTTAAAGTTTTGGGTCAATCCTACTTTGATGTGTTTAAACCTAAGATAATATAATATAACATTAAAATTTACTTTCACTTATAAACTTATCTTATTGATTTATTATTATTATTTGTGTACAGCCCCTGAGAAGAAACATAGACTCCCATCTGCTTACAATCGTTTCATGAAGTAAGAATAATTACAACTTATTAATTACAAAAGGAATAGAAAATTAATTTTTCTTAATTAGTTCTTTAAGAATTGAAACTTTATTATATTACAATATATACATTATTGTTTTAATGTTAGAGAGGAAATTCAACGTATCAAAGCTGCCAACCCAGAAATACCTCATCGAGAAGCATTTAGTGCAGCAGCAAAAAACGTAATCAACTTTCTTTTTAATCTATACATCTTTTCTTTTATTTTTTTTCATTTTAAAATCTATAGTTTCTTTATTGTTATAACTTTTTTTTCTTCACAACAGTGGGCAAGGTACATTCCTAATTCAGCTGCTGGGTCGGTTTCTGGTACTCACAACAACAATGTAAGAAAGAAATTGTAACAAATATAAAAGTTTGAATGGTTCAATTTTATCATTTAGTGATAATTTTCTCTAATTAATCAATATGAATATGCAACTATTGTTGACATTAATGGATTTTAGGGGCTTTTTCAATTTTGCAGGAATGAAAGGGTTATAATTAGGACAGTGGAAGATGGGGGCGAATCATATGGCTGTCTAATCTAGGGTTTGATAAAGTTAAAGAATTGACCATGTCTTATGTCTTTCGTATCGTCATTTTTTCCTCGCACTTCATGTTTTTTCTTTGTGTTATGTTTTTGCTTTTTCGTGGATGAATCTTTGTTCGTTGTATCGATTTAAAGCTATAAGATCGAGTTGTATTTTCTAATATCATAGTATAATTGTAATTCACTTTTTTTATATATATATATTATTTTTGAAGTAAAAGGTTCAAATCTTGACGTAGTCTATTATATTTGTGAACAAGTTTTTGGATGAACATAAAATTAAATCGTGCATCCTATTAAAATTTACAGTTTGTGTCAATTAATATCTTTTCTTGCCCTAAAAATGTGAGATTAAATGGATATGTATGATCAAATATGGAGTTAAAAGTAAAAATGTGTTGCTTAGAAAAAGAACAAAATAAAAAGGGGTTGGGAGTGGAAACGACAGTCCCGGGTAGGACGTCATGTCGTCGGGACGTGGGAAAGTAAAAGACGACAGTGAAAGTAATGTCGGGGGA

Coding sequence (CDS)

ATGAGTAACTCCGAAGACAAATCTTCCATGGCTGATCTGGTTCAACCTTCTGAGCATTTCTGTTATGTCAAATGCAACTTTTGTAACACTGTTCTTGCGGTTGGGATTCCATGCAGACATTGGTTGGATACGGTGACAGTGAAATGTGGTCATTGTAGTAATCTCTCTTTTTTGAGCACAAGACCTCCTTTACAAGGCCAATGCATTGATCATCCTCTAACTTTTCAGTCTCAGGTTGGATTCTCCAATAATGATCATATTCGAAAGGGTGCTTCCACATCTTCCACTTCCACTGCCTCTTCAATCACAAATGATTCTCCAAATTTTGTTGTCAAACCCCCTGAGAAGAAACATAGACTCCCATCTGCTTACAATCGTTTCATGAAAGAGGAAATTCAACGTATCAAAGCTGCCAACCCAGAAATACCTCATCGAGAAGCATTTAGTGCAGCAGCAAAAAACTGGGCAAGGTACATTCCTAATTCAGCTGCTGGGTCGGTTTCTGGTACTCACAACAACAATGAATGA

Protein sequence

MSNSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLSTRPPLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSPNFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNNNE

Homology

[Close]

BLAST of Cucsat.G9475 vs. ExPASy Swiss-Prot
Match: Q8L925 (Protein CRABS CLAW OS=Arabidopsis thaliana OX=3702 GN=CRC PE=1 SV=2)

HSP 1 Score: 202.2 bits (513), Expect = 4.8e-51
Identity = 111/174 (63.79%), Postives = 131/174 (75.29%), Query Frame = 0


Query: 3   NSEDKSSM-ADLVQP-SEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLST 62
           N E+K +M A    P +EH  YV+C+ CNT+LAVGIP +  LDTVTVKCGHC NLSFL+T
Sbjct: 2   NLEEKPTMTASRASPQAEHLYYVRCSICNTILAVGIPLKRMLDTVTVKCGHCGNLSFLTT 61

Query: 63  RPPLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASS--ITNDSPNFVVKPPEKKH 122
            PPLQG      LT Q Q  F  +D+ +KG+S+SS+S+ SS    + SP FVVKPPEKK 
Sbjct: 62  TPPLQGHV---SLTLQMQ-SFGGSDY-KKGSSSSSSSSTSSDQPPSPSPPFVVKPPEKKQ 121

Query: 123 RLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHN 173
           RLPSAYNRFM++EIQRIK+ANPEIPHREAFSAAAKNWA+YIPNS     SG HN
Sbjct: 122 RLPSAYNRFMRDEIQRIKSANPEIPHREAFSAAAKNWAKYIPNSPTSITSGGHN 170

[Close]

BLAST of Cucsat.G9475 vs. ExPASy Swiss-Prot
Match: Q76EJ0 (Protein DROOPING LEAF OS=Oryza sativa subsp. japonica OX=39947 GN=DL PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.0e-45
Identity = 98/167 (58.68%), Postives = 116/167 (69.46%), Query Frame = 0


Query: 12  DLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLSTRPPLQGQC--I 71
           DLV PSEH CYV+C +CNTVLAVG+PC+  +DTVTVKCGHC+NLSFLS RPP+       
Sbjct: 2   DLVSPSEHLCYVRCTYCNTVLAVGVPCKRLMDTVTVKCGHCNNLSFLSPRPPMVQPLSPT 61

Query: 72  DHPL-TFQSQVGFSNNDHIRKGASTSSTSTASSITNDSPNFVVKPPEKKHRLPSAYNRFM 131
           DHPL  FQ           R+       S  S+  +    FVVKPPEKKHRLPSAYNRFM
Sbjct: 62  DHPLGPFQGPC-----TDCRRNQPLPLVSPTSNEGSPRAPFVVKPPEKKHRLPSAYNRFM 121

Query: 132 KEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNNNE 176
           +EEIQRIKAA P+IPHREAFS AAKNWA+  P   + +VS +++N E
Sbjct: 122 REEIQRIKAAKPDIPHREAFSMAAKNWAKCDPR-CSSTVSTSNSNPE 162

[Close]

BLAST of Cucsat.G9475 vs. ExPASy Swiss-Prot
Match: Q8GW46 (Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.2e-31
Identity = 74/155 (47.74%), Postives = 95/155 (61.29%), Query Frame = 0


Query: 10  MADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLSTRPPLQGQCI 69
           MA+ V  +E  CY+ CNFCN +LAV +PC    D VTV+CGHC+NL  ++    LQ   +
Sbjct: 1   MANSVMATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQS--L 60

Query: 70  DHPLTFQS------QVGFSNNDHIRKGASTSSTSTASSITNDSPNFVVKPPEKKHRLPSA 129
             P  FQ+      + G S+  H      T   S  S+ T      V +PPEK+ R+PSA
Sbjct: 61  SRP-NFQATNYAVPEYGSSSRSH------TKIPSRISTRTITEQRIVNRPPEKRQRVPSA 120

Query: 130 YNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARY 159
           YN+F+KEEIQRIKA NP+I HREAFS AAKNWA +
Sbjct: 121 YNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHF 146

[Close]

BLAST of Cucsat.G9475 vs. ExPASy Swiss-Prot
Match: Q9XFB0 (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.0e-29
Identity = 73/154 (47.40%), Postives = 93/154 (60.39%), Query Frame = 0


Query: 17  SEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFL--------STRPPLQGQC 76
           SE  CYV C+FC T+LAV +P       VTV+CGHC+NL  L        ++ PP+    
Sbjct: 7   SERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPIHQDL 66

Query: 77  IDHPLTFQSQVGFSNNDHIRKGASTSSTST---ASSITNDSPNF-VVKPPEKKHRLPSAY 136
             H     S V        RK  ++SS ST   + +I  ++P    ++PPEK+ R+PSAY
Sbjct: 67  QPHRQHTTSLV-------TRKDCASSSRSTNNLSENIDREAPRMPPIRPPEKRQRVPSAY 126

Query: 137 NRFMKEEIQRIKAANPEIPHREAFSAAAKNWARY 159
           NRF+KEEIQRIKA NPEI HREAFS AAKNWA +
Sbjct: 127 NRFIKEEIQRIKACNPEISHREAFSTAAKNWAHF 153

[Close]

BLAST of Cucsat.G9475 vs. ExPASy Swiss-Prot
Match: Q10FZ7 (Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 5.1e-29
Identity = 75/169 (44.38%), Postives = 104/169 (61.54%), Query Frame = 0


Query: 11  ADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLSTRPPLQG-QCI 70
           A +V   EH CYV CNFCNT+ AV +P    L+ VTV+CGHC++L  ++ R  +Q     
Sbjct: 3   AQIVPAPEHVCYVHCNFCNTIFAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLVQALPAE 62

Query: 71  DHPLTFQSQVGFSNNDHIRKGASTSSTSTASSI--TNDSPNFV-VKPPEKKHRLPSAYNR 130
           DH          S  ++  +  S+S       +   ND+ + + V+PPEK+ R+PSAYNR
Sbjct: 63  DHLQDNLKMHNMSFRENYSEYGSSSRYGRVPMMFSKNDTEHMLHVRPPEKRQRVPSAYNR 122

Query: 131 FMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNNNE 176
           F+KEEI+RIKA NP+I HREAFS AAKNWA + PN   G   G+H +++
Sbjct: 123 FIKEEIRRIKANNPDISHREAFSTAAKNWAHF-PNIHFG--LGSHESSK 168

[Close]

BLAST of Cucsat.G9475 vs. NCBI nr
Match: XP_008446454.1 (PREDICTED: protein CRABS CLAW [Cucumis melo] >XP_011655718.1 protein CRABS CLAW isoform X2 [Cucumis sativus] >KGN51988.1 hypothetical protein Csa_008905 [Cucumis sativus])

HSP 1 Score: 360 bits (923), Expect = 1.97e-125
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MSNSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLST 60
           MSNSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLST
Sbjct: 1   MSNSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLST 60

Query: 61  RPPLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSPNFVVKPPEKKHRL 120
           RPPLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSPNFVVKPPEKKHRL
Sbjct: 61  RPPLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSPNFVVKPPEKKHRL 120

Query: 121 PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNNNE 175
           PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNNNE
Sbjct: 121 PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNNNE 175

[Close]

BLAST of Cucsat.G9475 vs. NCBI nr
Match: XP_031741115.1 (protein CRABS CLAW isoform X1 [Cucumis sativus])

HSP 1 Score: 358 bits (918), Expect = 2.86e-124
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0


Query: 1   MSNSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLST 60
           MSNSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLST
Sbjct: 1   MSNSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLST 60

Query: 61  RPPLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSPNFVVKPPEKKHRL 120
           RPPLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSPNFVVKPPEKKHRL
Sbjct: 61  RPPLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSPNFVVKPPEKKHRL 120

Query: 121 PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNNN 174
           PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNNN
Sbjct: 121 PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNNN 174

[Close]

BLAST of Cucsat.G9475 vs. NCBI nr
Match: XP_038893343.1 (protein CRABS CLAW isoform X1 [Benincasa hispida])

HSP 1 Score: 312 bits (799), Expect = 1.59e-106
Identity = 159/173 (91.91%), Postives = 165/173 (95.38%), Query Frame = 0


Query: 2   SNSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLSTR 61
           SNS+DKSSM DLVQPSEH CYVKCNFCNTVLAVGIPCR  LDTVTVKCGHCSNLSFLSTR
Sbjct: 4   SNSDDKSSM-DLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR 63

Query: 62  PPLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSP--NFVVKPPEKKHR 121
           PPLQGQCIDHPL+FQSQVGFSN+  IRKGASTSSTST+SS+TN+SP  NFVVKPPEKKHR
Sbjct: 64  PPLQGQCIDHPLSFQSQVGFSND--IRKGASTSSTSTSSSLTNESPSPNFVVKPPEKKHR 123

Query: 122 LPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHN 172
           LPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHN
Sbjct: 124 LPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHN 173

[Close]

BLAST of Cucsat.G9475 vs. NCBI nr
Match: XP_038893344.1 (protein CRABS CLAW isoform X2 [Benincasa hispida])

HSP 1 Score: 303 bits (777), Expect = 3.35e-103
Identity = 157/173 (90.75%), Postives = 163/173 (94.22%), Query Frame = 0


Query: 2   SNSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLSTR 61
           SNS+DKSSM DLVQPSEH CYVKCNFCNTVLAVGIPCR  LDTVTVKCGHCSNLSFLSTR
Sbjct: 4   SNSDDKSSM-DLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTR 63

Query: 62  PPLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSP--NFVVKPPEKKHR 121
           PPLQGQCIDHPL+FQ  VGFSN+  IRKGASTSSTST+SS+TN+SP  NFVVKPPEKKHR
Sbjct: 64  PPLQGQCIDHPLSFQ--VGFSND--IRKGASTSSTSTSSSLTNESPSPNFVVKPPEKKHR 123

Query: 122 LPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHN 172
           LPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHN
Sbjct: 124 LPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHN 171

[Close]

BLAST of Cucsat.G9475 vs. NCBI nr
Match: XP_022149102.1 (protein CRABS CLAW [Momordica charantia])

HSP 1 Score: 301 bits (772), Expect = 1.94e-102
Identity = 151/173 (87.28%), Postives = 160/173 (92.49%), Query Frame = 0


Query: 3   NSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLSTRP 62
           +SED  +  DLVQPSEH CYV+CNFCNTVLAVGIPCR  LDTVTVKCGHCSNLSFLSTRP
Sbjct: 2   SSEDSKTSMDLVQPSEHLCYVRCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 61

Query: 63  PLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSPN--FVVKPPEKKHRL 122
           PLQGQCIDHPL FQ+QVGFSN+  IRKGASTSSTST+SS+ N+SP+  FVVKPPEKKHRL
Sbjct: 62  PLQGQCIDHPLGFQTQVGFSND--IRKGASTSSTSTSSSMANESPSPSFVVKPPEKKHRL 121

Query: 123 PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNN 173
           PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNN
Sbjct: 122 PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNN 172

[Close]

BLAST of Cucsat.G9475 vs. ExPASy TrEMBL
Match: A0A0A0KQW3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606780 PE=3 SV=1)

HSP 1 Score: 360 bits (923), Expect = 9.53e-126
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MSNSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLST 60
           MSNSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLST
Sbjct: 1   MSNSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLST 60

Query: 61  RPPLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSPNFVVKPPEKKHRL 120
           RPPLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSPNFVVKPPEKKHRL
Sbjct: 61  RPPLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSPNFVVKPPEKKHRL 120

Query: 121 PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNNNE 175
           PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNNNE
Sbjct: 121 PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNNNE 175

[Close]

BLAST of Cucsat.G9475 vs. ExPASy TrEMBL
Match: A0A1S3BFS7 (protein CRABS CLAW OS=Cucumis melo OX=3656 GN=LOC103489190 PE=3 SV=1)

HSP 1 Score: 360 bits (923), Expect = 9.53e-126
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MSNSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLST 60
           MSNSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLST
Sbjct: 1   MSNSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLST 60

Query: 61  RPPLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSPNFVVKPPEKKHRL 120
           RPPLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSPNFVVKPPEKKHRL
Sbjct: 61  RPPLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSPNFVVKPPEKKHRL 120

Query: 121 PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNNNE 175
           PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNNNE
Sbjct: 121 PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNNNE 175

[Close]

BLAST of Cucsat.G9475 vs. ExPASy TrEMBL
Match: A0A6J1D6X3 (protein CRABS CLAW OS=Momordica charantia OX=3673 GN=LOC111017593 PE=3 SV=1)

HSP 1 Score: 301 bits (772), Expect = 9.39e-103
Identity = 151/173 (87.28%), Postives = 160/173 (92.49%), Query Frame = 0


Query: 3   NSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLSTRP 62
           +SED  +  DLVQPSEH CYV+CNFCNTVLAVGIPCR  LDTVTVKCGHCSNLSFLSTRP
Sbjct: 2   SSEDSKTSMDLVQPSEHLCYVRCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 61

Query: 63  PLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSPN--FVVKPPEKKHRL 122
           PLQGQCIDHPL FQ+QVGFSN+  IRKGASTSSTST+SS+ N+SP+  FVVKPPEKKHRL
Sbjct: 62  PLQGQCIDHPLGFQTQVGFSND--IRKGASTSSTSTSSSMANESPSPSFVVKPPEKKHRL 121

Query: 123 PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNN 173
           PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNN
Sbjct: 122 PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNN 172

[Close]

BLAST of Cucsat.G9475 vs. ExPASy TrEMBL
Match: A0A6J1FZK6 (protein CRABS CLAW OS=Cucurbita moschata OX=3662 GN=LOC111449367 PE=3 SV=1)

HSP 1 Score: 300 bits (767), Expect = 5.25e-102
Identity = 152/173 (87.86%), Postives = 162/173 (93.64%), Query Frame = 0


Query: 3   NSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLSTRP 62
           +SEDKSSM DLVQPS+H CYVKCNFCNTVLAVGIPCR  LDTVTVKCGHCSNLSFLSTRP
Sbjct: 2   SSEDKSSM-DLVQPSDHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 61

Query: 63  PLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASSITNDSP--NFVVKPPEKKHRL 122
           PLQGQCIDHPL+FQSQVGFSN+  IRKGASTSS+S++SS+ N+SP  NFVVKPPEKKHRL
Sbjct: 62  PLQGQCIDHPLSFQSQVGFSND--IRKGASTSSSSSSSSMANESPSANFVVKPPEKKHRL 121

Query: 123 PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNN 173
           PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSA GS SGTH+N
Sbjct: 122 PSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSADGSASGTHDN 171

[Close]

BLAST of Cucsat.G9475 vs. ExPASy TrEMBL
Match: A0A6J1HVT7 (protein CRABS CLAW OS=Cucurbita maxima OX=3661 GN=LOC111467334 PE=3 SV=1)

HSP 1 Score: 295 bits (754), Expect = 5.57e-100
Identity = 152/176 (86.36%), Postives = 161/176 (91.48%), Query Frame = 0


Query: 3   NSEDKSSMADLVQPSEHFCYVKCNFCNTVLAVGIPCRHWLDTVTVKCGHCSNLSFLSTRP 62
           +SEDK+SM DLVQPSEH CYVKCNFCNTVLAVGIPCR  LDTVTVKCGHCSNLSFLSTRP
Sbjct: 2   SSEDKASM-DLVQPSEHLCYVKCNFCNTVLAVGIPCRRLLDTVTVKCGHCSNLSFLSTRP 61

Query: 63  PLQGQCIDHPLTFQSQVGFSNNDHIRKGASTSSTSTASS---ITNDSP--NFVVKPPEKK 122
           PLQGQCIDHPL+FQSQVGFSNN  IRKGASTSS+S++SS   + N+SP  NFVVKPPEKK
Sbjct: 62  PLQGQCIDHPLSFQSQVGFSNN--IRKGASTSSSSSSSSSSSMANESPSANFVVKPPEKK 121

Query: 123 HRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSAAGSVSGTHNN 173
           HRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNS  GS SGTH+N
Sbjct: 122 HRLPSAYNRFMKEEIQRIKAANPEIPHREAFSAAAKNWARYIPNSVDGSASGTHDN 174

The following BLAST results are available for this feature:

BLAST of Cucsat.G9475 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L925	4.8e-51	63.79	Protein CRABS CLAW OS=Arabidopsis thaliana OX=3702 GN=CRC PE=1 SV=2	[more]
Q76EJ0	3.0e-45	58.68	Protein DROOPING LEAF OS=Oryza sativa subsp. japonica OX=39947 GN=DL PE=1 SV=1	[more]
Q8GW46	4.2e-31	47.74	Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1	[more]
Q9XFB0	3.0e-29	47.40	Putative axial regulator YABBY 2 OS=Arabidopsis thaliana OX=3702 GN=YAB2 PE=1 SV...	[more]
Q10FZ7	5.1e-29	44.38	Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1	[more]

BLAST of Cucsat.G9475 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446454.1	1.97e-125	100.00	PREDICTED: protein CRABS CLAW [Cucumis melo] >XP_011655718.1 protein CRABS CLAW ...	[more]
XP_031741115.1	2.86e-124	100.00	protein CRABS CLAW isoform X1 [Cucumis sativus]	[more]
XP_038893343.1	1.59e-106	91.91	protein CRABS CLAW isoform X1 [Benincasa hispida]	[more]
XP_038893344.1	3.35e-103	90.75	protein CRABS CLAW isoform X2 [Benincasa hispida]	[more]
XP_022149102.1	1.94e-102	87.28	protein CRABS CLAW [Momordica charantia]	[more]

BLAST of Cucsat.G9475 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQW3	9.53e-126	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G606780 PE=3 SV=1	[more]
A0A1S3BFS7	9.53e-126	100.00	protein CRABS CLAW OS=Cucumis melo OX=3656 GN=LOC103489190 PE=3 SV=1	[more]
A0A6J1D6X3	9.39e-103	87.28	protein CRABS CLAW OS=Momordica charantia OX=3673 GN=LOC111017593 PE=3 SV=1	[more]
A0A6J1FZK6	5.25e-102	87.86	protein CRABS CLAW OS=Cucurbita moschata OX=3662 GN=LOC111449367 PE=3 SV=1	[more]
A0A6J1HVT7	5.57e-100	86.36	protein CRABS CLAW OS=Cucurbita maxima OX=3661 GN=LOC111467334 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 16..158 e-value: 1.5E-50 score: 172.0
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 10..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..108
None	No IPR available	PANTHER	PTHR31675:SF1	PROTEIN CRABS CLAW	coord: 10..158
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 102..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G9475.T1	Cucsat.G9475.T1	mRNA
Cucsat.G9475.T2	Cucsat.G9475.T2	mRNA
Cucsat.G9475.T3	Cucsat.G9475.T3	mRNA
Cucsat.G9475.T5	Cucsat.G9475.T5	mRNA
Cucsat.G9475.T6	Cucsat.G9475.T6	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010582	floral meristem determinacy
biological_process	GO:0010254	nectary development
biological_process	GO:0048479	style development
biological_process	GO:0007275	multicellular organism development
molecular_function	GO:0000976	transcription cis-regulatory region binding