Cucsat.G9438 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G9438
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	lysine histidine transporter-like 6
Location	ctg1673: 708779 .. 710015 (-)
RNA-Seq Expression	Cucsat.G9438
Synteny	Cucsat.G9438

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ACACCAATTTCAAAGCACTTTCAACTTTGTCTTTGTTTTTGGGTTCCATCTCTTAACATTTATTTCAAAAATGGTTTCTACTTCTCAACCTCCTAAGGTGAAGCCTTCATCAACAATTATCATGCCCAATGGCTATGGCTATTTGGCCTTAATTCCTCTGTTTTGTTTTTTCTTTTTTCCCTTAAACTGTTATTATACATTTTGTTTTCATTTTAATCAACTCTCTCATCTTCTCAGGAAACTCTTCATGTTGACCAAAAATGGAAGGAGGAAGACCCGACACGGCGAGCCAAGTGGTGGTATGCCACCTTTCATTCTGTTACCGCCATGATAGGTGCTGGCGTTCTCAGCCTACCCTACGCTATGGCTTACTTGGGATGGTAATGTTAAATCACTGCTAAACTCAAAAACTTACATTAATTTCGAGTAACTTCAAATTAAAAGCCTTTGACATGCAGAACTTAATTATGAGAAATATACATAAAATTTCTCTACTCAACTTTTCTGGTTTCTCTATGGCTTGATCAGGGGTCCAGGAACAATGGTCTTGTTTGTATCATGGTGCATGACTCTAAACACCATGTGGCAGATGATTCAGCTTCATGAATGCGTCGCGGGGACACGTTTTGATCGATATATCGACCTCGGTCGATATGCTTTTGGCGAAAAACTTGGTCCTTGGATTGTGCTGCCACAACAACTCATCGTTCAAGTCGGTTGCGACATAGTGTATATGGTTACAGGTAAGATTCACTTCTACATATCAACATCGACGAAACTGTCTCACTCATAAAAATATATATATATATATATGTATGAAAATATCCCCATGTTGAAATTACAGGAGGGAAGTGCATGAAGAAGTTCATGGAGATGGCTTGTGTAAACTGCTTTGAAGTGAAACAATCCTATTGGATTCTGATATTTGGTTCAATCCATTTCTTTCTTTCTCAACTTCCCAACTTCAATTCTGTTGCTGGCGTTTCCCTTGCAGCTGCCATTATGTCTCTAAGGTAAAAGATAATTGTTAAGCACATGTTTATTTTAAAACTAAAAGAAGAAGAAACCTGCCTCACTTTTTTTCACAGAATATGTTCCATTAATTCAACATTTATAGATCTGAAAAAATCTTGTTTTTTTATTATAAAGATTATTTCAAAATGTTCTTAAAGCTATGTTTGATATCTTCTACTTTATTCTTGTTTCTTTCAAACTTCAGTTGTGAGTCTAAGAATTTCTCAAACATTTAAAAGCAAAAAAATTTCTGATACCTTTTGAAGTAATAAAAAGTTGAAGGAAAGAGAATAGAAAAGACAAGGAGTATCTTTTGATAGAAGAAACATTAAAGTAAAGATGATGAAGAAGAAAAAAAGGAACCAAAACTTTGCTCTATAAGTAGTACAAATCAATAAAAATTTTAAAAAACAATAAATCATTTTAAATTTTAAGTTTTTTTAGAATTATAACATCAATTCTATACTAACAACCATAGGTTTTTAACTGCTGTGGTTGAAGAAAAAAATTGCTATGTTCTCTTTTATTTTCTTTATCTATTAAAAAAAAGAATCGTTACAATGTTGTTGTCTTCTTAATATAATTGTTAAACGTAGGTTAGAAAAACGGTATATCCTTAATAACTATATAATACAACGAGGTCTTTTTTCTCCTTTTTCCTTTTGTCATATTTCTCTTATGCAATATTAAGGTATAAAACTGACAAGTTTGGCAACTATATAATGTGAACTCTAATGAATATCAACACAGAAGTAAGTATTTTGTCTTAGATATATATAAGCAAGGATTAGAGAAAATTTTAGTTTTCATTCAAAGAATAAATCTAACCCCTAACTTTTTATATGTCTATTTTTTATACTAAATTTGAAGAGTCCACTTATTAAGCCGAGTTAATAAGTATGAAGTTAAGATGGTAGAGTTATGTGAAAAGATTAAGTTGGTAAATGTGAAGATATAAATGATATAAAAACGGAGGTTAGCGTAAGAAGTTAACAGGTCAAAAAAACGATGGTTAAGTAAGAAAAATGAGAGGAACGTTGTTGACTTAAAGATAAAACCAAGGAGCTAAATTGCTTCACTTTTTCATTCAATGGCTAACAAAAGAAGACATGTCTTATCTTTTGAAAGAACAAATAAAGAGAAGGATATGGAAGAAAATTCTTTTTCCACATTAAAATAAACCAAAGCAATAAAGACAAGTTAAAAAATAAAGCAAGCTTTAATTAGACATAGGGTAAAATAAAAGATAGGTTTTTCAGTTTATGTGTATACCTCATTTAATTTTGACATAGATTGCAATAAATTCCACTAGTAGATTAGATTAAAGTAACTTTGGCTAATAAAGGATTAAGTTATTCAATTAGGGGATATTTTTTATTCTTAGAATATTTATTATAATAAGAAAATATCCTCCAATAAAGTCAAGCATTCTATTATCTTATCTTTAGTTAAGTTTTAAGCTAAACATTCAATTTTTATCATTAAAATTATTCTCTTTTATTTAAATAATGTTGCTATTTTTATTAACAAGACTTTTGAAATATATACAACGAAAAAATTAACTAAATTAGTTTAATAAAATTACTACAAACATCTTCATGAAAACTACAATTAACTTTAAAACTAAAACATGCACACCTTTCTTTATCAAAAGTACTTATTAGTAATTCAAGTGATGAAAAGAAAAAAAAGGGTTTAGTTAAACTTCTAATTTGAAGACGATATGGATTGATTTGGTTGCAGCTACTCGACGATTGCATGGGTGGGGAGCTTGAGCCGAGGCCGAATCGAAAACGTGAGCTATGCCTACAAGGAAACCAGTGTCCAAGATTCAATGTTTAGAGTGTTCAATGCGTTAGGCCAAATCTCGTTCGCATTTGCTGGGCACGCAGTGGTTTTGGAGATTCAGGCCACCATACCATCGACACCGGAGAAGCCTTCAAGAGTTCCTATGTGGAAAGGGGCGATGGGGGCTTATTTCATCAACGCCATCTGCTATTTTCCGGTGGCTTTGATTGGATATTGGGCTTTTGGTCAAGATGTTGAAGACAATGTTCTTTTGAATCTCAAGAAACCTGCATGGCTCATTGCTTCTGCTAATCTTATGGTTGTTGTTCATGTAATTGGCAGTTACCAGGTTCGAATACATATTACTAACACTCTGTTCGATAATCGTTTTAAACATGCATGTTACCCTAATTATATATTATATGGTTATGGAAAATATCACTTTCAATGTTTATTTTTATGTTTCGATGATTTTCTTAACGATATAATGAGAATATCGAGAGTCACCTCTCATATCGATATCAACCTCATGAAAACGTAGAAATACCGATGAAAATATCTAACATGTACATTAATTTAAATTTAAATTTTACCGAGTATTATATAAACAGGTGTATGCGATGCCTGTATTTGATATGTTGGAGAGGATGATAAGGAAGAGATTCAACTTTCCTGATGGATTTTGCCTTAGATTTATCACTCGATCCGCTTATGTTGGTGAGTCTAATTCTTACCTAAAACGAAATTCATGTCAATTATTGTTAATCTAAACTCACTTTGAGATAACTAATTTTAGTTAAACTTTTTAAATTGATTGGATTAAAAATTTGATAATTTTGAAACTATATGGATGATGACCAAATCATTAAATTAACCAAAGTTGGACCTTAAAGTATTAATTAACTAACCAATGTTGTTTATTTTCCAGCATTTACAATATTTATTGGTGTGACCTTTCCATTCTTCGGAGATCTGCTGGGTTTCTTCGGTGGCTTTGGTTTTGCTCCCACTTCATACTTTGTAACATTTCTATCCCTCTCTTTAAAGATTGGAGATTAATTCATAATTTAATTTGTTATTTCAAGATGGTAAGGTATGATAATCCGTTCAAGATGTACACAATTTTAATTTAGGTAACAAATGATATAGATAACGATTATACAACAATAAATACAACATAGAAAAGCTGCATCACTTATATATATATCCATCTCATTGCTAACTAATGTTGAAACAAAACTTCATGTTTTCTTTTTTCTTTAGGGTAAAATAATATTCTAATCTTTCCTATTTTTATTCTATTATTTAATGGATAAATTAATTGATTAATGGCAGCTTCCAAGTATAATGTGGCTAGTCATCAAGAAGCCAAAGAGATACAGTTGCAATTGGCTCATCAACTGGGTATATACATATACATATATTTCTTTGTCAAAAGAAAAAAAAACTTCATACTAATTGGAGTATTATTCATTAATTATCATTAATTAAGGATGCAGTAACTTTTTAAAATTATTTTTGCAAATAATTAATATATAGTTAATCCATTACAGGCAAGCATATTCGTTGGAGTCTTCATAATGTTGGCTTCCACTGTGGGAGGTCTCCGCAATATAATAACCGATGCTTCCACTTACACGTTCTATACTTAAAAGTATAGAAATTTTTTATACGACGTTTGTTCGGTCTCTAAGGTTTTATTGTGTATTGTTTTGGTTTAGATTTAAAAGAATCACGAGTAATTTATTATTGTTATCTCAAGTATTGACATGAAATTAAAAATAATAATTTCATCTTTTGTTTTTC

Coding sequence (CDS)

CACCAATTTCAAAGCACTTTCAACTTTGTCTTTGTTTTTGGGTTCCATCTCTTAACATTTATTTCAAAAATGGTTTCTACTTCTCAACCTCCTAAGGAAACTCTTCATGTTGACCAAAAATGGAAGGAGGAAGACCCGACACGGCGAGCCAAGTGGTGGTATGCCACCTTTCATTCTGTTACCGCCATGATAGGTGCTGGCGTTCTCAGCCTACCCTACGCTATGGCTTACTTGGGATGGGGTCCAGGAACAATGGTCTTGTTTGTATCATGGTGCATGACTCTAAACACCATGTGGCAGATGATTCAGCTTCATGAATGCGTCGCGGGGACACGTTTTGATCGATATATCGACCTCGGTCGATATGCTTTTGGCGAAAAACTTGGTCCTTGGATTGTGCTGCCACAACAACTCATCGTTCAAGTCGGTTGCGACATAGTGTATATGGTTACAGGAGGGAAGTGCATGAAGAAGTTCATGGAGATGGCTTGTGTAAACTGCTTTGAAGTGAAACAATCCTATTGGATTCTGATATTTGGTTCAATCCATTTCTTTCTTTCTCAACTTCCCAACTTCAATTCTGTTGCTGGCGTTTCCCTTGCAGCTGCCATTATGTCTCTAAGCTACTCGACGATTGCATGGGTGGGGAGCTTGAGCCGAGGCCGAATCGAAAACGTGAGCTATGCCTACAAGGAAACCAGTGTCCAAGATTCAATGTTTAGAGTGTTCAATGCGTTAGGCCAAATCTCGTTCGCATTTGCTGGGCACGCAGTGGTTTTGGAGATTCAGGCCACCATACCATCGACACCGGAGAAGCCTTCAAGAGTTCCTATGTGGAAAGGGGCGATGGGGGCTTATTTCATCAACGCCATCTGCTATTTTCCGGTGGCTTTGATTGGATATTGGGCTTTTGGTCAAGATGTTGAAGACAATGTTCTTTTGAATCTCAAGAAACCTGCATGGCTCATTGCTTCTGCTAATCTTATGGTTGTTGTTCATGTAATTGGCAGTTACCAGGTGTATGCGATGCCTGTATTTGATATGTTGGAGAGGATGATAAGGAAGAGATTCAACTTTCCTGATGGATTTTGCCTTAGATTTATCACTCGATCCGCTTATGTTGCATTTACAATATTTATTGGTGTGACCTTTCCATTCTTCGGAGATCTGCTGGGTTTCTTCGGTGGCTTTGGTTTTGCTCCCACTTCATACTTTCTTCCAAGTATAATGTGGCTAGTCATCAAGAAGCCAAAGAGATACAGTTGCAATTGGCTCATCAACTGGGCAAGCATATTCGTTGGAGTCTTCATAATGTTGGCTTCCACTGTGGGAGGTCTCCGCAATATAATAACCGATGCTTCCACTTACACGTTCTATACTTAA

Protein sequence

HQFQSTFNFVFVFGFHLLTFISKMVSTSQPPKETLHVDQKWKEEDPTRRAKWWYATFHSVTAMIGAGVLSLPYAMAYLGWGPGTMVLFVSWCMTLNTMWQMIQLHECVAGTRFDRYIDLGRYAFGEKLGPWIVLPQQLIVQVGCDIVYMVTGGKCMKKFMEMACVNCFEVKQSYWILIFGSIHFFLSQLPNFNSVAGVSLAAAIMSLSYSTIAWVGSLSRGRIENVSYAYKETSVQDSMFRVFNALGQISFAFAGHAVVLEIQATIPSTPEKPSRVPMWKGAMGAYFINAICYFPVALIGYWAFGQDVEDNVLLNLKKPAWLIASANLMVVVHVIGSYQVYAMPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPTSYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFYT

Homology

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BLAST of Cucsat.G9438 vs. ExPASy Swiss-Prot
Match: Q9C6M2 (Lysine histidine transporter-like 6 OS=Arabidopsis thaliana OX=3702 GN=At1g25530 PE=2 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.7e-47
Identity = 88/117 (75.21%), Postives = 102/117 (87.18%), Query Frame = 0


Query: 1   MPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT 60
           MPVFD+LERM+  +F F  G  LRF TR+ YVAFT+FIGV+FPFFGDLLGFFGGFGFAPT
Sbjct: 323 MPVFDLLERMMVNKFGFKHGVVLRFFTRTIYVAFTLFIGVSFPFFGDLLGFFGGFGFAPT 382

Query: 61  SYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFY 118
           S+FLPSIMWL+IKKP+R+S  W +NW SI VGVFIMLAST+GGLRNII D+STY+FY
Sbjct: 383 SFFLPSIMWLIIKKPRRFSVTWFVNWISIIVGVFIMLASTIGGLRNIIADSSTYSFY 439

[Close]

BLAST of Cucsat.G9438 vs. ExPASy Swiss-Prot
Match: Q9LRB5 (Lysine histidine transporter 2 OS=Arabidopsis thaliana OX=3702 GN=LHT2 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 8.5e-36
Identity = 70/118 (59.32%), Postives = 88/118 (74.58%), Query Frame = 0


Query: 1   MPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT 60
           MPVFDMLE ++ K+ NF   F LRFITRS YVAFT+ + +  PFFG LLGFFGGF FAPT
Sbjct: 324 MPVFDMLETVLVKKMNFNPSFKLRFITRSLYVAFTMIVAICVPFFGGLLGFFGGFAFAPT 383

Query: 61  SYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFYT 119
           +Y+LP IMWLV+KKPKR+  +W  NW  I VGV + + + +GGLR II +A TY F++
Sbjct: 384 TYYLPCIMWLVLKKPKRFGLSWTANWFCIIVGVLLTILAPIGGLRTIIINAKTYKFFS 441

[Close]

BLAST of Cucsat.G9438 vs. ExPASy Swiss-Prot
Match: Q9SR44 (Lysine histidine transporter-like 2 OS=Arabidopsis thaliana OX=3702 GN=At1g67640 PE=2 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 7.2e-35
Identity = 69/118 (58.47%), Postives = 85/118 (72.03%), Query Frame = 0


Query: 1   MPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT 60
           MPVFDMLE  + K+  F   F LRFITR+ YVAFT+F+ +  PFFG LLGFFGGF FAPT
Sbjct: 324 MPVFDMLETFLVKKMMFAPSFKLRFITRTLYVAFTMFVAICIPFFGGLLGFFGGFAFAPT 383

Query: 61  SYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFYT 119
           +Y+LP IMWL IKKPK+Y  +W INW  I VGV + + + +GGLR II  A  Y F++
Sbjct: 384 TYYLPCIMWLCIKKPKKYGLSWCINWFCIVVGVILTILAPIGGLRTIIISAKNYEFFS 441

[Close]

BLAST of Cucsat.G9438 vs. ExPASy Swiss-Prot
Match: Q9C733 (Lysine histidine transporter-like 1 OS=Arabidopsis thaliana OX=3702 GN=At1g48640 PE=3 SV=2)

HSP 1 Score: 146.0 bits (367), Expect = 2.7e-34
Identity = 68/118 (57.63%), Postives = 86/118 (72.88%), Query Frame = 0


Query: 1   MPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT 60
           MPVFDM+E  + K+ NF     LRFI R+ YVA T+FIG+  PFFG LL FFGGF FAPT
Sbjct: 336 MPVFDMVETFLVKKLNFKPSTVLRFIVRNVYVALTMFIGIMIPFFGGLLAFFGGFAFAPT 395

Query: 61  SYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFYT 119
           SYFLP IMWL+I KPKR+S +W  NW  I +GV +M+ S++GGLR II  +  Y+F++
Sbjct: 396 SYFLPCIMWLLIYKPKRFSLSWWTNWVCIVLGVVLMILSSIGGLRQIIIQSKDYSFFS 453

[Close]

BLAST of Cucsat.G9438 vs. ExPASy Swiss-Prot
Match: Q9FKS8 (Lysine histidine transporter 1 OS=Arabidopsis thaliana OX=3702 GN=LHT1 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.0e-33
Identity = 66/118 (55.93%), Postives = 85/118 (72.03%), Query Frame = 0


Query: 1   MPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT 60
           MPVFDM+E ++ K+ NF     LRF  R+ YVA T+F+G+TFPFFG LL FFGGF FAPT
Sbjct: 329 MPVFDMMETLLVKKLNFRPTTTLRFFVRNFYVAATMFVGMTFPFFGGLLAFFGGFAFAPT 388

Query: 61  SYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFYT 119
           +YFLP ++WL I KPK+YS +W  NW  I  G+F+M+ S +GGLR I+  A  Y FY+
Sbjct: 389 TYFLPCVIWLAIYKPKKYSLSWWANWVCIVFGLFLMVLSPIGGLRTIVIQAKGYKFYS 446

[Close]

BLAST of Cucsat.G9438 vs. NCBI nr
Match: XP_004135109.1 (lysine histidine transporter-like 6 [Cucumis sativus] >KGN52055.1 hypothetical protein Csa_008090 [Cucumis sativus])

HSP 1 Score: 245 bits (625), Expect = 1.68e-77
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT 60
           MPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT
Sbjct: 320 MPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT 379

Query: 61  SYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFYT 118
           SYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFYT
Sbjct: 380 SYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFYT 437

[Close]

BLAST of Cucsat.G9438 vs. NCBI nr
Match: XP_038892873.1 (lysine histidine transporter-like 6 isoform X1 [Benincasa hispida])

HSP 1 Score: 235 bits (600), Expect = 9.68e-74
Identity = 111/118 (94.07%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT 60
           MPVFDMLER+IRKRFNF DGFCLRFITRSAYVAFTIF+GVTFPFFGDLLGFFGGFGFAPT
Sbjct: 320 MPVFDMLERLIRKRFNFQDGFCLRFITRSAYVAFTIFVGVTFPFFGDLLGFFGGFGFAPT 379

Query: 61  SYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFYT 118
           SYFLPSIMWLVIKKP+RYSCNW INW SIF+GVFIMLASTVGGLRNIITDASTYTFYT
Sbjct: 380 SYFLPSIMWLVIKKPQRYSCNWFINWVSIFIGVFIMLASTVGGLRNIITDASTYTFYT 437

[Close]

BLAST of Cucsat.G9438 vs. NCBI nr
Match: XP_008446564.1 (PREDICTED: lysine histidine transporter-like 6 [Cucumis melo])

HSP 1 Score: 234 bits (597), Expect = 2.73e-73
Identity = 115/118 (97.46%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT 60
           MPVFDMLERMIRKRFNF DGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT
Sbjct: 320 MPVFDMLERMIRKRFNFRDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT 379

Query: 61  SYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFYT 118
           SYFLPSIMWLVIKKPKRYS NWLINWASI VGVFIMLASTVGGLRNIITDASTYTFYT
Sbjct: 380 SYFLPSIMWLVIKKPKRYSWNWLINWASICVGVFIMLASTVGGLRNIITDASTYTFYT 437

[Close]

BLAST of Cucsat.G9438 vs. NCBI nr
Match: XP_023541259.1 (lysine histidine transporter-like 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 229 bits (584), Expect = 2.46e-71
Identity = 108/118 (91.53%), Postives = 113/118 (95.76%), Query Frame = 0


Query: 1   MPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT 60
           MPVFDMLERM+RKR NFPDGFCL+FITR+AYVAFTIF+GVTFPFFGDLLGFFGGFGFAPT
Sbjct: 320 MPVFDMLERMMRKRLNFPDGFCLKFITRTAYVAFTIFVGVTFPFFGDLLGFFGGFGFAPT 379

Query: 61  SYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFYT 118
           SYFLPS+MWLVIKKPKRYS NW INW SIFVGVFIMLASTVGGLRNII DASTYTFYT
Sbjct: 380 SYFLPSVMWLVIKKPKRYSFNWFINWVSIFVGVFIMLASTVGGLRNIIADASTYTFYT 437

[Close]

BLAST of Cucsat.G9438 vs. NCBI nr
Match: KAG6573987.1 (Lysine histidine transporter-like 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013045.1 Lysine histidine transporter-like 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 226 bits (575), Expect = 5.52e-70
Identity = 107/118 (90.68%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT 60
           MPVFDMLERM+RKR NFPDGFCL+FITR+AYVAFTIF+GVTFPFFGDLLGFFGGFGFAPT
Sbjct: 320 MPVFDMLERMMRKRLNFPDGFCLKFITRTAYVAFTIFVGVTFPFFGDLLGFFGGFGFAPT 379

Query: 61  SYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFYT 118
           SYFLPS+MWLVIKKPKR S NW INW SIFVGVFIMLASTVGGLRNII DASTYTFYT
Sbjct: 380 SYFLPSVMWLVIKKPKRCSFNWFINWVSIFVGVFIMLASTVGGLRNIIADASTYTFYT 437

[Close]

BLAST of Cucsat.G9438 vs. ExPASy TrEMBL
Match: A0A0A0KR22 (Aa_trans domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G608430 PE=3 SV=1)

HSP 1 Score: 245 bits (625), Expect = 8.12e-78
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT 60
           MPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT
Sbjct: 320 MPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT 379

Query: 61  SYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFYT 118
           SYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFYT
Sbjct: 380 SYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFYT 437

[Close]

BLAST of Cucsat.G9438 vs. ExPASy TrEMBL
Match: A0A1S3BG07 (lysine histidine transporter-like 6 OS=Cucumis melo OX=3656 GN=LOC103489259 PE=3 SV=1)

HSP 1 Score: 234 bits (597), Expect = 1.32e-73
Identity = 115/118 (97.46%), Postives = 115/118 (97.46%), Query Frame = 0


Query: 1   MPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT 60
           MPVFDMLERMIRKRFNF DGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT
Sbjct: 320 MPVFDMLERMIRKRFNFRDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT 379

Query: 61  SYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFYT 118
           SYFLPSIMWLVIKKPKRYS NWLINWASI VGVFIMLASTVGGLRNIITDASTYTFYT
Sbjct: 380 SYFLPSIMWLVIKKPKRYSWNWLINWASICVGVFIMLASTVGGLRNIITDASTYTFYT 437

[Close]

BLAST of Cucsat.G9438 vs. ExPASy TrEMBL
Match: A0A6J1FZ43 (lysine histidine transporter-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111449233 PE=3 SV=1)

HSP 1 Score: 226 bits (575), Expect = 2.67e-70
Identity = 107/118 (90.68%), Postives = 112/118 (94.92%), Query Frame = 0


Query: 1   MPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT 60
           MPVFDMLERM+RKR NFPDGFCL+FITR+AYVAFTIF+GVTFPFFGDLLGFFGGFGFAPT
Sbjct: 320 MPVFDMLERMMRKRLNFPDGFCLKFITRTAYVAFTIFVGVTFPFFGDLLGFFGGFGFAPT 379

Query: 61  SYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFYT 118
           SYFLPS+MWLVIKKPKR S NW INW SIFVGVFIMLASTVGGLRNII DASTYTFYT
Sbjct: 380 SYFLPSVMWLVIKKPKRCSFNWFINWVSIFVGVFIMLASTVGGLRNIIADASTYTFYT 437

[Close]

BLAST of Cucsat.G9438 vs. ExPASy TrEMBL
Match: A0A6J1HXM7 (lysine histidine transporter-like 6 OS=Cucurbita maxima OX=3661 GN=LOC111467772 PE=3 SV=1)

HSP 1 Score: 222 bits (566), Expect = 6.31e-69
Identity = 105/118 (88.98%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 1   MPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT 60
           MPVFDMLERM+RKR NFPDGFCL+ I R+AYVAFTIF+GVTFPFFGDLLGFFGGFGFAPT
Sbjct: 322 MPVFDMLERMMRKRLNFPDGFCLKLIARTAYVAFTIFVGVTFPFFGDLLGFFGGFGFAPT 381

Query: 61  SYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFYT 118
           SYFLPS+MWLVIKKPKRYS NW INW SI VGVFIMLASTVGGLRNII DASTYTFYT
Sbjct: 382 SYFLPSLMWLVIKKPKRYSFNWFINWVSILVGVFIMLASTVGGLRNIIADASTYTFYT 439

[Close]

BLAST of Cucsat.G9438 vs. ExPASy TrEMBL
Match: A0A6J1INH4 (lysine histidine transporter-like 6 OS=Cucurbita maxima OX=3661 GN=LOC111479065 PE=3 SV=1)

HSP 1 Score: 221 bits (563), Expect = 1.73e-68
Identity = 105/117 (89.74%), Postives = 111/117 (94.87%), Query Frame = 0


Query: 1   MPVFDMLERMIRKRFNFPDGFCLRFITRSAYVAFTIFIGVTFPFFGDLLGFFGGFGFAPT 60
           MPVFDMLERM+RKRFNFP GF LRFITR+AYVAFTIF+GVTFPFFGDLLGFFGGFGFAPT
Sbjct: 321 MPVFDMLERMMRKRFNFPHGFLLRFITRTAYVAFTIFVGVTFPFFGDLLGFFGGFGFAPT 380

Query: 61  SYFLPSIMWLVIKKPKRYSCNWLINWASIFVGVFIMLASTVGGLRNIITDASTYTFY 117
           SYFLPS+MWLVIKKPKRYS +W INWASI +GVFIMLASTVGGLRNII DASTYTFY
Sbjct: 381 SYFLPSVMWLVIKKPKRYSRSWFINWASILIGVFIMLASTVGGLRNIIADASTYTFY 437

The following BLAST results are available for this feature:

BLAST of Cucsat.G9438 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C6M2	1.7e-47	75.21	Lysine histidine transporter-like 6 OS=Arabidopsis thaliana OX=3702 GN=At1g25530...	[more]
Q9LRB5	8.5e-36	59.32	Lysine histidine transporter 2 OS=Arabidopsis thaliana OX=3702 GN=LHT2 PE=1 SV=1	[more]
Q9SR44	7.2e-35	58.47	Lysine histidine transporter-like 2 OS=Arabidopsis thaliana OX=3702 GN=At1g67640...	[more]
Q9C733	2.7e-34	57.63	Lysine histidine transporter-like 1 OS=Arabidopsis thaliana OX=3702 GN=At1g48640...	[more]
Q9FKS8	1.0e-33	55.93	Lysine histidine transporter 1 OS=Arabidopsis thaliana OX=3702 GN=LHT1 PE=1 SV=1	[more]

BLAST of Cucsat.G9438 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135109.1	1.68e-77	100.00	lysine histidine transporter-like 6 [Cucumis sativus] >KGN52055.1 hypothetical p...	[more]
XP_038892873.1	9.68e-74	94.07	lysine histidine transporter-like 6 isoform X1 [Benincasa hispida]	[more]
XP_008446564.1	2.73e-73	97.46	PREDICTED: lysine histidine transporter-like 6 [Cucumis melo]	[more]
XP_023541259.1	2.46e-71	91.53	lysine histidine transporter-like 6 [Cucurbita pepo subsp. pepo]	[more]
KAG6573987.1	5.52e-70	90.68	Lysine histidine transporter-like 6, partial [Cucurbita argyrosperma subsp. soro...	[more]

BLAST of Cucsat.G9438 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KR22	8.12e-78	100.00	Aa_trans domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G608430 PE...	[more]
A0A1S3BG07	1.32e-73	97.46	lysine histidine transporter-like 6 OS=Cucumis melo OX=3656 GN=LOC103489259 PE=3...	[more]
A0A6J1FZ43	2.67e-70	90.68	lysine histidine transporter-like 6 OS=Cucurbita moschata OX=3662 GN=LOC11144923...	[more]
A0A6J1HXM7	6.31e-69	88.98	lysine histidine transporter-like 6 OS=Cucurbita maxima OX=3661 GN=LOC111467772 ...	[more]
A0A6J1INH4	1.73e-68	89.74	lysine histidine transporter-like 6 OS=Cucurbita maxima OX=3661 GN=LOC111479065 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 49..444 e-value: 6.4E-97 score: 324.8
None	No IPR available	PANTHER	PTHR48017:SF16	LYSINE HISTIDINE TRANSPORTER-LIKE 6	coord: 37..456
None	No IPR available	PANTHER	PTHR48017	OS05G0424000 PROTEIN-RELATED	coord: 37..456

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G9438.T1	Cucsat.G9438.T1	mRNA
Cucsat.G9438.T5	Cucsat.G9438.T5	mRNA
Cucsat.G9438.T2	Cucsat.G9438.T2	mRNA
Cucsat.G9438.T6	Cucsat.G9438.T6	mRNA
Cucsat.G9438.T3	Cucsat.G9438.T3	mRNA
Cucsat.G9438.T4	Cucsat.G9438.T4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006865	amino acid transport
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0015293	symporter activity