Cucsat.G9378 (gene) Cucumber (B10) v3

Overview
NameCucsat.G9378
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionTLC domain-containing protein
Locationctg1672: 126626 .. 131186 (-)
RNA-Seq ExpressionCucsat.G9378
SyntenyCucsat.G9378
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGAAGGTTGAGGAAATGAGGTTCAAAGCTTAAAGGTAAACTAACGATTTAATCGTAAGGTTTGAATAGATGTATTATCAATTCCTATTGTTCAAGATAGAGGAAGGCTACTTGATTGGCCTTGATTATCACATGATTTTAACCCGAAGTGCTTTGTTGGCTCACTAATTTCTAAATGTCAATAGTTTATCCTATTGTTTGGGCCATCTAGTTAAGTCGTCTTTGCAATGATTTAATTGCAGTGCTGTTTGTTTTGGTGAACCGGTGGCTGAGTTATGGTTCCGGTTCAGAGGGGATGTTTGAGCATTCACAATTGTTTGGAGGAACATGGCCGTGGGCTTTTGCAGCTTTGTGCTTCTCATGTGGATATTTTGCATATGATCAGTGGGATATGCTGCAATATGGACTATATAGTGGCTGGATTCCTGCGATCTTGGTTCATCATCTGGTTCTTCTCATTTGCTTCACGCTTGCTTTGTATAGGAATGTCACCATCAATTATCTCAATCTCACTCTCATTTGCGAGGTATGCTTTAGTTTATTCTTGTAAAATGTGCCTTGTGAATATGCTGCTCTCTTTCTTCATGTTTGTGGTTCTTTCTGGATTTAAGCATTTCTGTTACGATTACAACGTCTCCTTTGATGACTTCGACACAGGCACAAAGATGAGGTATCCAACTATTTAACGATGGTTTCAGATTTAAGTTGTTTTCAAAGGAACGTAATAGATAGATATTTTATCTAGTGCTTTTGGCTTGAACAGTCCATCTTAATCTCTTGTGGCACCCAGTTTCCTTTTTTGATCACTTTCTCAATGCACTTTCTCTCACTGAGTTCTCTTTGTATTCACCCTTTTCACATTGTTCTACTCCCTTACACAATTTCTGACGCTTTACTCTTAGTTACCCATTCCCTTACCTTATTTTTCGTTGCATATTTTCTCTCTATGTATACTTTCTGTCTGGTACATTTGTGTATTTCAAACAATATTAATTAAGTCAAAAACTTACTAAACACTTTTTAAAGTTCATGAACTAATTAGACACAAACCTCAAGAATCATTGACTAAACTTATAATTTAACCTAGTCTATTTCTACCCAATCTTTCTTACTATGTCTCTCCACTTGTCTTCTTTTTTTTACTTTTTGATCTCGTGATGTGCACACATACGGAACATGCCTTTTAGGTGGGAAATTAAACACCTTAGTTAGCAAATGATAGAGAGTGAACTTCTATGCCCGTATTGAAGGACCTTGTTAAATCATCGATTGACCCATATATTAGCTTAAACTTTTAGGTCAATCAATAATTTAATATGGTATTAGAGCAGATGGTCTAGAAGGTTATATGGTCACACTCTTGCAAACCAGATCTATTCTTAGAACAACCATAATCTATTAGAATCAAACCAAGTTTTCAGGTCACTTTTTACTTCCAGCTTTTGATACGCAGAACTAAAACTAGAATCGTTCTGATGTTCCAGATGCATTCTATCTTTCTCCATGTAAGGCGGTTGCGAAGGATGGCTGGTGTTCGTGATGCCAAGAGCATTATCGTGAAAGTTGAATGGATTCTCAACTGGCTAACATTTGTTTTCGCAAGGTTTGTTCCACACATTCTCATTACTGTCAAGCTCATCATAGATGCTTCCAAGTTTGATAAAGGCGTAGAGCTGCCACTTGCATTGTCTGGGATGGCTGGCATGAACCTGCTGAATGCTTTACTTGGTATTGATCTTTTAAACGCTGTAAAGAAAGAGAGTAATTACAAGAAAACTGATGACACTCATCATGAATGAACGAGGACTAACTTGGGTGGAAATTAACACGGAAGAAAAAATTTCATAATATCAGAGTTTAATATTTAGTTGAAGAAACTGTGTACTATTAATATTGTTTTTAATATAGTTCTTAGGCTTTTAATATTTTTAGGCAAAAATAGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAAATCTAGAAATCTGAAAGTGTTGTAATTTTTACTTTTTGTTCAATTTACGTTCAGTTTAGTAACTACTTTTCCTAGCTTTTGGTCTATCATGTCAGGATCAATTTTCTCTCTAACAATCATGTCAACCATTAAGGTCTATTAAATAATTCCTACTCTTA

Coding sequence (CDS)

ATGTTTGAGCATTCACAATTGTTTGGAGGAACATGGCCGTGGGCTTTTGCAGCTTTGTGCTTCTCATGTGGATATTTTGCATATGATCAGTGGGATATGCTGCAATATGGACTATATAGTGGCTGGATTCCTGCGATCTTGGTTCATCATCTGGTTCTTCTCATTTGCTTCACGCTTGCTTTGTATAGGAATGTCACCATCAATTATCTCAATCTCACTCTCATTTGCGAGATGCATTCTATCTTTCTCCATGTAAGGCGGTTGCGAAGGATGGCTGGTGTTCGTGATGCCAAGAGCATTATCGTGAAAGTTGAATGGATTCTCAACTGGCTAACATTTGTTTTCGCAAGGTTTGTTCCACACATTCTCATTACTGTCAAGCTCATCATAGATGCTTCCAAGTTTGATAAAGGCGTAGAGCTGCCACTTGCATTGTCTGGGATGGCTGGCATGAACCTGCTGAATGCTTTACTTGGTATTGATCTTTTAAACGCTGTAAAGAAAGAGAGTAATTACAAGAAAACTGATGACACTCATCATGAATGA

Protein sequence

MFEHSQLFGGTWPWAFAALCFSCGYFAYDQWDMLQYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMHSIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGVELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE
Homology
[Close]
BLAST of Cucsat.G9378 vs. NCBI nr
Match: XP_004150440.1 (TLC domain-containing protein 2 [Cucumis sativus] >KGN47727.1 hypothetical protein Csa_018230 [Cucumis sativus])

HSP 1 Score: 347 bits (889), Expect = 1.92e-118
Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0 

Query: 1   MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL 60
           MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL
Sbjct: 1   MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL 60

Query: 61  LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL 120
           LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL
Sbjct: 61  LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL 120

Query: 121 CFSCGYFAYDQWDMLQYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICE 178
           CFSCGYFAYDQWDML+YGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICE
Sbjct: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICE 178

[Close]
BLAST of Cucsat.G9378 vs. NCBI nr
Match: XP_008466713.1 (PREDICTED: TLC domain-containing protein 2 [Cucumis melo])

HSP 1 Score: 329 bits (843), Expect = 1.92e-111
Identity = 168/178 (94.38%), Postives = 174/178 (97.75%), Query Frame = 0 

Query: 1   MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL 60
           MAGRTLLKEKSRA SFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIR+L
Sbjct: 1   MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL 60

Query: 61  LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL 120
           +SKDPLLVNTSVSLLHSI+TSASVLFVLVNRWLSY S SEGMFEHSQLFGGTWPWA+AAL
Sbjct: 61  VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL 120

Query: 121 CFSCGYFAYDQWDMLQYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICE 178
           CFSCGYFAYDQWDML+YGLYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTL+CE
Sbjct: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCE 178

[Close]
BLAST of Cucsat.G9378 vs. NCBI nr
Match: XP_038884583.1 (TLC domain-containing protein 2 [Benincasa hispida])

HSP 1 Score: 311 bits (797), Expect = 1.79e-104
Identity = 163/178 (91.57%), Postives = 169/178 (94.94%), Query Frame = 0 

Query: 1   MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL 60
           MAGRT+LKEK RA SFFSATL+LWSVSL FEILFDRRF LLYVVFGALFYQSANS+IR L
Sbjct: 1   MAGRTVLKEKRRAGSFFSATLVLWSVSLCFEILFDRRFELLYVVFGALFYQSANSAIRFL 60

Query: 61  LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL 120
           +SKDPLLVNTSVSLLHS ITSASVLFVLVNRWLSYGS  EG+FEHSQLFGGTWPWA+AAL
Sbjct: 61  VSKDPLLVNTSVSLLHSTITSASVLFVLVNRWLSYGS--EGIFEHSQLFGGTWPWAYAAL 120

Query: 121 CFSCGYFAYDQWDMLQYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICE 178
           CFSCGYFAYDQWDMLQYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTLICE
Sbjct: 121 CFSCGYFAYDQWDMLQYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICE 176

[Close]
BLAST of Cucsat.G9378 vs. NCBI nr
Match: XP_023550889.1 (TLC domain-containing protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 310 bits (794), Expect = 5.11e-104
Identity = 159/178 (89.33%), Postives = 171/178 (96.07%), Query Frame = 0 

Query: 1   MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL 60
           MAGRT+LKEKSRA SFFSATL+LW+VSLWFEILFDRRF LLY+VFGALFYQSANS+IR L
Sbjct: 1   MAGRTMLKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 61  LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL 120
           +SK+PL+VNT+VSLLHSIITSASVLFVLVNRWLS+GS  +GMFEHSQLFGGTWPWA+AAL
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFVLVNRWLSHGS--DGMFEHSQLFGGTWPWAYAAL 120

Query: 121 CFSCGYFAYDQWDMLQYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICE 178
           CFSCGYFAYDQWDMLQY LYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTLICE
Sbjct: 121 CFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICE 176

[Close]
BLAST of Cucsat.G9378 vs. NCBI nr
Match: XP_022939854.1 (TLC domain-containing protein 2 [Cucurbita moschata] >KAG6578966.1 TLC domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016488.1 TLC domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 308 bits (789), Expect = 2.94e-103
Identity = 158/178 (88.76%), Postives = 170/178 (95.51%), Query Frame = 0 

Query: 1   MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL 60
           MAGRT+LKEKSRA SFFSATL+LW+VSLWFEILFDRRF LLY+VFGALFYQSANS+IR L
Sbjct: 1   MAGRTVLKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 61  LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL 120
           +SK+PL+VNT+VSLLHSIITSASVLFVL NRWLS+GS  +GMFEHSQLFGGTWPWA+AAL
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFVLANRWLSHGS--DGMFEHSQLFGGTWPWAYAAL 120

Query: 121 CFSCGYFAYDQWDMLQYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICE 178
           CFSCGYFAYDQWDMLQY LYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTLICE
Sbjct: 121 CFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICE 176

[Close]
BLAST of Cucsat.G9378 vs. ExPASy TrEMBL
Match: A0A0A0KH54 (TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G385110 PE=4 SV=1)

HSP 1 Score: 347 bits (889), Expect = 9.30e-119
Identity = 177/178 (99.44%), Postives = 178/178 (100.00%), Query Frame = 0 

Query: 1   MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL 60
           MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL
Sbjct: 1   MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL 60

Query: 61  LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL 120
           LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL
Sbjct: 61  LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL 120

Query: 121 CFSCGYFAYDQWDMLQYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICE 178
           CFSCGYFAYDQWDML+YGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICE
Sbjct: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICE 178

[Close]
BLAST of Cucsat.G9378 vs. ExPASy TrEMBL
Match: A0A1S3CRX5 (TLC domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103504058 PE=4 SV=1)

HSP 1 Score: 329 bits (843), Expect = 9.31e-112
Identity = 168/178 (94.38%), Postives = 174/178 (97.75%), Query Frame = 0 

Query: 1   MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL 60
           MAGRTLLKEKSRA SFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIR+L
Sbjct: 1   MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL 60

Query: 61  LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL 120
           +SKDPLLVNTSVSLLHSI+TSASVLFVLVNRWLSY S SEGMFEHSQLFGGTWPWA+AAL
Sbjct: 61  VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL 120

Query: 121 CFSCGYFAYDQWDMLQYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICE 178
           CFSCGYFAYDQWDML+YGLYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTL+CE
Sbjct: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCE 178

[Close]
BLAST of Cucsat.G9378 vs. ExPASy TrEMBL
Match: A0A6J1FID3 (TLC domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111445599 PE=4 SV=1)

HSP 1 Score: 308 bits (789), Expect = 1.43e-103
Identity = 158/178 (88.76%), Postives = 170/178 (95.51%), Query Frame = 0 

Query: 1   MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL 60
           MAGRT+LKEKSRA SFFSATL+LW+VSLWFEILFDRRF LLY+VFGALFYQSANS+IR L
Sbjct: 1   MAGRTVLKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 61  LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL 120
           +SK+PL+VNT+VSLLHSIITSASVLFVL NRWLS+GS  +GMFEHSQLFGGTWPWA+AAL
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFVLANRWLSHGS--DGMFEHSQLFGGTWPWAYAAL 120

Query: 121 CFSCGYFAYDQWDMLQYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICE 178
           CFSCGYFAYDQWDMLQY LYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTLICE
Sbjct: 121 CFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICE 176

[Close]
BLAST of Cucsat.G9378 vs. ExPASy TrEMBL
Match: A0A6J1K0R9 (TLC domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111489133 PE=4 SV=1)

HSP 1 Score: 305 bits (782), Expect = 1.65e-102
Identity = 156/178 (87.64%), Postives = 170/178 (95.51%), Query Frame = 0 

Query: 1   MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL 60
           MAGRT+LKE+SRA SFFSATL+LW+VSLWFEILFDRRF LLY+VFGALFYQSANS+IR L
Sbjct: 1   MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 61  LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL 120
           +SK+PL+VNT+VSLLHSIITSASVLF+LVNRWLS+G   +GMFEHSQLFGGTWPWA+AAL
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSHGL--DGMFEHSQLFGGTWPWAYAAL 120

Query: 121 CFSCGYFAYDQWDMLQYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICE 178
           CFSCGYFAYDQWDMLQY LYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTLICE
Sbjct: 121 CFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICE 176

[Close]
BLAST of Cucsat.G9378 vs. ExPASy TrEMBL
Match: A0A6J1CKF5 (TLC domain-containing protein 2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011955 PE=4 SV=1)

HSP 1 Score: 278 bits (710), Expect = 1.45e-91
Identity = 148/178 (83.15%), Postives = 158/178 (88.76%), Query Frame = 0 

Query: 1   MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL 60
           MAGR + KEKSRA SFFSATL+LW VS+WFEILF RR  LLYVVFGALFYQSAN ++R L
Sbjct: 1   MAGRRVPKEKSRAGSFFSATLVLWIVSIWFEILFYRRSELLYVVFGALFYQSANWTVRAL 60

Query: 61  LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL 120
           +SKDPL VNTSVSLLHS ITSASVLF+LV++WLSYGS   GMFEHSQL GGTW  A+AAL
Sbjct: 61  VSKDPLFVNTSVSLLHSTITSASVLFILVSQWLSYGS--HGMFEHSQLVGGTWSGAYAAL 120

Query: 121 CFSCGYFAYDQWDMLQYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICE 178
           CFSCGYFAYDQWDML Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTLICE
Sbjct: 121 CFSCGYFAYDQWDMLLYQLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICE 176

The following BLAST results are available for this feature:
BLAST of Cucsat.G9378 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G9378 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004150440.11.92e-11899.44TLC domain-containing protein 2 [Cucumis sativus] >KGN47727.1 hypothetical prote... [more]
XP_008466713.11.92e-11194.38PREDICTED: TLC domain-containing protein 2 [Cucumis melo][more]
XP_038884583.11.79e-10491.57TLC domain-containing protein 2 [Benincasa hispida][more]
XP_023550889.15.11e-10489.33TLC domain-containing protein 2 [Cucurbita pepo subsp. pepo][more]
XP_022939854.12.94e-10388.76TLC domain-containing protein 2 [Cucurbita moschata] >KAG6578966.1 TLC domain-co... [more]
BLAST of Cucsat.G9378 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KH549.30e-11999.44TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G385110 PE=4 SV... [more]
A0A1S3CRX59.31e-11294.38TLC domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103504058 PE=4 SV=... [more]
A0A6J1FID31.43e-10388.76TLC domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111445599 PE... [more]
A0A6J1K0R91.65e-10287.64TLC domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111489133 PE=4... [more]
A0A6J1CKF51.45e-9183.15TLC domain-containing protein 2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006634TRAM/LAG1/CLN8 homology domainPFAMPF03798TRAM_LAG1_CLN8coord: 69..179
e-value: 2.3E-9
score: 37.3
IPR006634TRAM/LAG1/CLN8 homology domainPROSITEPS50922TLCcoord: 62..185
score: 8.605293
NoneNo IPR availablePANTHERPTHR13439CT120 PROTEINcoord: 16..185
NoneNo IPR availablePANTHERPTHR13439:SF4TLC DOMAIN-CONTAINING PROTEIN FLD-1coord: 16..185

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G9378.T3Cucsat.G9378.T3mRNA
Cucsat.G9378.T1Cucsat.G9378.T1mRNA
Cucsat.G9378.T2Cucsat.G9378.T2mRNA
Cucsat.G9378.T4Cucsat.G9378.T4mRNA
Cucsat.G9378.T5Cucsat.G9378.T5mRNA
Cucsat.G9378.T6Cucsat.G9378.T6mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071709 membrane assembly
biological_process GO:0055091 phospholipid homeostasis
biological_process GO:0007009 plasma membrane organization
biological_process GO:0097035 regulation of membrane lipid distribution
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane