Cucsat.G9102 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G9102
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Leucine-rich repeat protein kinase family protein
Location	ctg1635: 1247723 .. 1248112 (+)
RNA-Seq Expression	Cucsat.G9102
Synteny	Cucsat.G9102

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAATGAATCCAACATCATAATCAAAGAAGTTGTACATGTACTTCCTACATCTTCCATATGCATTTGTTTGGTCAATACTGGCTTTGGATCACCTTTTATATCAGCATTGGAGCTTAGGCTTTTGAAAAATGCAAGTTATGTCACTGATTTTGATTTGCTAGCTCTCCACAGACGGTTGGACGTTGGTTCAACAATCAACAGAACCGTCAGGTAAGACGTTTATGGGGAAAAAATGGTTAACGAAACTTGTTTTACTTTTACTGAAGCTGATGCTTGAATGTCCTTATGTCTCTTTTCAGGTACAATGATGACATTTCTGACAGGATCTGGGTGCCTTATAACTTTCTTAATTATAAAATTATGAACACTTCATCTACAGTTGATTCGGG

Coding sequence (CDS)

AATGAATCCAACATCATAATCAAAGAAGTTGTACATGTACTTCCTACATCTTCCATATGCATTTGTTTGGTCAATACTGGCTTTGGATCACCTTTTATATCAGCATTGGAGCTTAGGCTTTTGAAAAATGCAAGTTATGTCACTGATTTTGATTTGCTAGCTCTCCACAGACGGTTGGACGTTGGTTCAACAATCAACAGAACCGTCAGGTACAATGATGACATTTCTGACAGGATCTGGGTGCCTTATAACTTTCTTAATTATAAAATTATGAACACTTCATCTACAGTTGATTCG

Protein sequence

NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLDVGSTINRTVRYNDDISDRIWVPYNFLNYKIMNTSSTVDS

Homology

[Close]

BLAST of Cucsat.G9102 vs. ExPASy Swiss-Prot
Match: O65924 (Putative leucine-rich repeat receptor-like protein kinase At2g19210 OS=Arabidopsis thaliana OX=3702 GN=At2g19210 PE=1 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.5e-20
Identity = 46/99 (46.46%), Postives = 65/99 (65.66%), Query Frame = 0


Query: 1   NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLD 60
           N + I+ KE++H L +  + +CLV+   G+PF+SALE+RLLK+ +Y T +D L L +R D
Sbjct: 143 NATTIVTKEIIHTLRSDHVHVCLVDKNRGTPFLSALEIRLLKSNTYETPYDSLILFKRWD 202

Query: 61  VGSTINRTVRYNDDISDRIWVPYNFLNYKIMNTSSTVDS 100
           +G      VRY DD+ DRIW+P  F  Y I N S T+DS
Sbjct: 203 LGGLGALPVRYKDDVFDRIWIPLRFPKYTIFNASLTIDS 241

[Close]

BLAST of Cucsat.G9102 vs. ExPASy Swiss-Prot
Match: O64556 (Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g19230 OS=Arabidopsis thaliana OX=3702 GN=At2g19230 PE=1 SV=3)

HSP 1 Score: 95.9 bits (237), Expect = 2.7e-19
Identity = 46/98 (46.94%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 1   NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLD 60
           N + I+ KE+++ L +  + +CLV+   G+PF+S LELRLLKN  Y T  D L L+RR D
Sbjct: 142 NSTTIVTKEIIYTLRSDKVHVCLVDKERGTPFLSVLELRLLKNNIYETASDSLMLYRRWD 201

Query: 61  VGSTINRTVRYNDDISDRIWVPYNFLNYKIMNTSSTVD 99
           +G+T +   RY DDI DR W+P  F N+ I+NTS  +D
Sbjct: 202 LGATGDLPARYKDDIFDRFWMPLMFPNFLILNTSLMID 239

[Close]

BLAST of Cucsat.G9102 vs. ExPASy Swiss-Prot
Match: Q9C8I6 (LRR receptor-like serine/threonine-protein kinase IOS1 OS=Arabidopsis thaliana OX=3702 GN=IOS1 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 6.1e-19
Identity = 46/98 (46.94%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 1   NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLD 60
           NE+   I E++H+L T  + ICLV TG  +PFISALELR L N +Y+T    L    R D
Sbjct: 137 NETEASIFEMIHILTTDRLQICLVKTGNATPFISALELRKLMNTTYLTRQGSLQTFIRAD 196

Query: 61  VGSTINRTVRYNDDISDRIWVPYNFLNYKIMNTSSTVD 99
           VG+T+N+  RY  D+ DR+W PYNF N+  ++T+ +V+
Sbjct: 197 VGATVNQGYRYGIDVFDRVWTPYNFGNWSQISTNQSVN 234

[Close]

BLAST of Cucsat.G9102 vs. ExPASy Swiss-Prot
Match: O64483 (Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis thaliana OX=3702 GN=SIRK PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.1e-15
Identity = 44/97 (45.36%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 3   SNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLDVG 62
           + I+ KE++ +    ++ +C+V+   G+PF+S LE+RLL N +Y T +D L L RRLD  
Sbjct: 144 TTILNKEIITIPLLDNVQVCVVDKNAGTPFLSVLEIRLLLNTTYETPYDALTLLRRLDYS 203

Query: 63  STINRTVRYNDDISDRIWVPYNFLN-YKIMNTSSTVD 99
            T     RY DDI DRIW P    + YKI+NTS TVD
Sbjct: 204 KTGKLPSRYKDDIYDRIWTPRIVSSEYKILNTSLTVD 240

[Close]

BLAST of Cucsat.G9102 vs. ExPASy Swiss-Prot
Match: C0LGD6 (Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidopsis thaliana OX=3702 GN=At1g05700 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 4.1e-15
Identity = 46/101 (45.54%), Postives = 63/101 (62.38%), Query Frame = 0


Query: 1   NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLL--KNASYVTDFDLLALHRR 60
           N S+I+ KEVV++  + +I +CL N G G+PFIS LELR L   N +Y +    L   RR
Sbjct: 138 NGSSIVSKEVVYLSQSENIFVCLGNKGKGTPFISTLELRFLGNDNTTYDSPNGALFFSRR 197

Query: 61  LDVGSTINRTVRYNDDISDRIWVPYNFLNYKIMNTSSTVDS 100
            D+ S +   VRY+DD+ DRIW+P NF   + +NTS  V S
Sbjct: 198 WDLRSLMGSPVRYDDDVYDRIWIPRNFGYCREINTSLPVTS 238

[Close]

BLAST of Cucsat.G9102 vs. NCBI nr
Match: XP_011654400.2 (putative leucine-rich repeat receptor-like protein kinase At2g19210 [Cucumis sativus])

HSP 1 Score: 198 bits (504), Expect = 7.12e-57
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLD 60
           NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLD
Sbjct: 141 NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLD 200

Query: 61  VGSTINRTVRYNDDISDRIWVPYNFLNYKIMNTSSTVDS 99
           VGSTINRTVRYNDDISDRIWVPYNFLNYKIMNTSSTVDS
Sbjct: 201 VGSTINRTVRYNDDISDRIWVPYNFLNYKIMNTSSTVDS 239

[Close]

BLAST of Cucsat.G9102 vs. NCBI nr
Match: XP_008464660.1 (PREDICTED: putative leucine-rich repeat receptor-like protein kinase At2g19210 [Cucumis melo])

HSP 1 Score: 189 bits (481), Expect = 1.17e-53
Identity = 94/99 (94.95%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 1   NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLD 60
           NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASY TDFDLLALHRRLD
Sbjct: 143 NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYATDFDLLALHRRLD 202

Query: 61  VGSTINRTVRYNDDISDRIWVPYNFLNYKIMNTSSTVDS 99
           +GSTINRTVRYNDDISDRIWVP NFLNYKI++TSSTVDS
Sbjct: 203 IGSTINRTVRYNDDISDRIWVPSNFLNYKIISTSSTVDS 241

[Close]

BLAST of Cucsat.G9102 vs. NCBI nr
Match: KAA0063360.1 (putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 189 bits (481), Expect = 1.17e-53
Identity = 94/99 (94.95%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 1   NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLD 60
           NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASY TDFDLLALHRRLD
Sbjct: 143 NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYATDFDLLALHRRLD 202

Query: 61  VGSTINRTVRYNDDISDRIWVPYNFLNYKIMNTSSTVDS 99
           +GSTINRTVRYNDDISDRIWVP NFLNYKI++TSSTVDS
Sbjct: 203 IGSTINRTVRYNDDISDRIWVPSNFLNYKIISTSSTVDS 241

[Close]

BLAST of Cucsat.G9102 vs. NCBI nr
Match: TYK28062.1 (putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 189 bits (481), Expect = 1.40e-53
Identity = 94/99 (94.95%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 1   NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLD 60
           NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASY TDFDLLALHRRLD
Sbjct: 143 NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYATDFDLLALHRRLD 202

Query: 61  VGSTINRTVRYNDDISDRIWVPYNFLNYKIMNTSSTVDS 99
           +GSTINRTVRYNDDISDRIWVP NFLNYKI++TSSTVDS
Sbjct: 203 IGSTINRTVRYNDDISDRIWVPSNFLNYKIISTSSTVDS 241

[Close]

BLAST of Cucsat.G9102 vs. NCBI nr
Match: XP_038899298.1 (putative leucine-rich repeat receptor-like protein kinase At2g19210 [Benincasa hispida])

HSP 1 Score: 182 bits (462), Expect = 4.98e-51
Identity = 86/99 (86.87%), Postives = 95/99 (95.96%), Query Frame = 0


Query: 1   NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLD 60
           NESNIIIKEV+HVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLD
Sbjct: 143 NESNIIIKEVIHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLD 202

Query: 61  VGSTINRTVRYNDDISDRIWVPYNFLNYKIMNTSSTVDS 99
           +G+T N+TVRYNDD SDRIW+PYN  NYK+++TSST+DS
Sbjct: 203 IGATTNKTVRYNDDFSDRIWMPYNLTNYKVISTSSTIDS 241

[Close]

BLAST of Cucsat.G9102 vs. ExPASy TrEMBL
Match: A0A0A0L4B1 (Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G617340 PE=4 SV=1)

HSP 1 Score: 198 bits (504), Expect = 4.78e-58
Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0


Query: 1   NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLD 60
           NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLD
Sbjct: 141 NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLD 200

Query: 61  VGSTINRTVRYNDDISDRIWVPYNFLNYKIMNTSSTVDS 99
           VGSTINRTVRYNDDISDRIWVPYNFLNYKIMNTSSTVDS
Sbjct: 201 VGSTINRTVRYNDDISDRIWVPYNFLNYKIMNTSSTVDS 239

[Close]

BLAST of Cucsat.G9102 vs. ExPASy TrEMBL
Match: A0A5A7V7Z3 (Putative leucine-rich repeat receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1505G00330 PE=4 SV=1)

HSP 1 Score: 189 bits (481), Expect = 5.64e-54
Identity = 94/99 (94.95%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 1   NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLD 60
           NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASY TDFDLLALHRRLD
Sbjct: 143 NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYATDFDLLALHRRLD 202

Query: 61  VGSTINRTVRYNDDISDRIWVPYNFLNYKIMNTSSTVDS 99
           +GSTINRTVRYNDDISDRIWVP NFLNYKI++TSSTVDS
Sbjct: 203 IGSTINRTVRYNDDISDRIWVPSNFLNYKIISTSSTVDS 241

[Close]

BLAST of Cucsat.G9102 vs. ExPASy TrEMBL
Match: A0A1S3CNJ9 (putative leucine-rich repeat receptor-like protein kinase At2g19210 OS=Cucumis melo OX=3656 GN=LOC103502494 PE=4 SV=1)

HSP 1 Score: 189 bits (481), Expect = 5.64e-54
Identity = 94/99 (94.95%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 1   NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLD 60
           NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASY TDFDLLALHRRLD
Sbjct: 143 NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYATDFDLLALHRRLD 202

Query: 61  VGSTINRTVRYNDDISDRIWVPYNFLNYKIMNTSSTVDS 99
           +GSTINRTVRYNDDISDRIWVP NFLNYKI++TSSTVDS
Sbjct: 203 IGSTINRTVRYNDDISDRIWVPSNFLNYKIISTSSTVDS 241

[Close]

BLAST of Cucsat.G9102 vs. ExPASy TrEMBL
Match: A0A5D3DX12 (Putative leucine-rich repeat receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003230 PE=4 SV=1)

HSP 1 Score: 189 bits (481), Expect = 6.79e-54
Identity = 94/99 (94.95%), Postives = 97/99 (97.98%), Query Frame = 0


Query: 1   NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLD 60
           NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASY TDFDLLALHRRLD
Sbjct: 143 NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYATDFDLLALHRRLD 202

Query: 61  VGSTINRTVRYNDDISDRIWVPYNFLNYKIMNTSSTVDS 99
           +GSTINRTVRYNDDISDRIWVP NFLNYKI++TSSTVDS
Sbjct: 203 IGSTINRTVRYNDDISDRIWVPSNFLNYKIISTSSTVDS 241

[Close]

BLAST of Cucsat.G9102 vs. ExPASy TrEMBL
Match: A0A6J1C4B3 (LOW QUALITY PROTEIN: putative leucine-rich repeat receptor-like protein kinase At2g19210 OS=Momordica charantia OX=3673 GN=LOC111008150 PE=4 SV=1)

HSP 1 Score: 166 bits (419), Expect = 1.99e-45
Identity = 78/99 (78.79%), Postives = 94/99 (94.95%), Query Frame = 0


Query: 1   NESNIIIKEVVHVLPTSSICICLVNTGFGSPFISALELRLLKNASYVTDFDLLALHRRLD 60
           NES+IIIKEV+H LPTSSI ICLVNTGFGSPFISALEL+LLKNA+Y+T+F+LLALHRRLD
Sbjct: 144 NESSIIIKEVIHALPTSSINICLVNTGFGSPFISALELKLLKNATYMTNFELLALHRRLD 203

Query: 61  VGSTINRTVRYNDDISDRIWVPYNFLNYKIMNTSSTVDS 99
           +GST N+TVRY+DD+ DRIW+PYNF +YKI++TSST+DS
Sbjct: 204 IGSTTNKTVRYSDDVRDRIWLPYNFPHYKIISTSSTIDS 242

The following BLAST results are available for this feature:

BLAST of Cucsat.G9102 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65924	2.5e-20	46.46	Putative leucine-rich repeat receptor-like protein kinase At2g19210 OS=Arabidops...	[more]
O64556	2.7e-19	46.94	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g1...	[more]
Q9C8I6	6.1e-19	46.94	LRR receptor-like serine/threonine-protein kinase IOS1 OS=Arabidopsis thaliana O...	[more]
O64483	1.1e-15	45.36	Senescence-induced receptor-like serine/threonine-protein kinase OS=Arabidopsis ...	[more]
C0LGD6	4.1e-15	45.54	Probable LRR receptor-like serine/threonine-protein kinase At1g05700 OS=Arabidop...	[more]

BLAST of Cucsat.G9102 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011654400.2	7.12e-57	100.00	putative leucine-rich repeat receptor-like protein kinase At2g19210 [Cucumis sat...	[more]
XP_008464660.1	1.17e-53	94.95	PREDICTED: putative leucine-rich repeat receptor-like protein kinase At2g19210 [...	[more]
KAA0063360.1	1.17e-53	94.95	putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. mak...	[more]
TYK28062.1	1.40e-53	94.95	putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. mak...	[more]
XP_038899298.1	4.98e-51	86.87	putative leucine-rich repeat receptor-like protein kinase At2g19210 [Benincasa h...	[more]

BLAST of Cucsat.G9102 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4B1	4.78e-58	100.00	Protein kinase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G617...	[more]
A0A5A7V7Z3	5.64e-54	94.95	Putative leucine-rich repeat receptor-like protein kinase OS=Cucumis melo var. m...	[more]
A0A1S3CNJ9	5.64e-54	94.95	putative leucine-rich repeat receptor-like protein kinase At2g19210 OS=Cucumis m...	[more]
A0A5D3DX12	6.79e-54	94.95	Putative leucine-rich repeat receptor-like protein kinase OS=Cucumis melo var. m...	[more]
A0A6J1C4B3	1.99e-45	78.79	LOW QUALITY PROTEIN: putative leucine-rich repeat receptor-like protein kinase A...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024788	Malectin-like domain	PFAM	PF12819	Malectin_like	coord: 2..98 e-value: 2.7E-25 score: 89.3
None	No IPR available	PANTHER	PTHR45631:SF81	LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE PROTEIN-RELATED	coord: 1..99
None	No IPR available	PANTHER	PTHR45631	OS07G0107800 PROTEIN-RELATED	coord: 1..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G9102.T1	Cucsat.G9102.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004674	protein serine/threonine kinase activity