Cucsat.G9021 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G9021
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	HTH myb-type domain-containing protein
Location	ctg1635: 1061247 .. 1066437 (+)
RNA-Seq Expression	Cucsat.G9021
Synteny	Cucsat.G9021

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGTCTAGGGCGTTAGACTTAAGAGAGGATTTCGGTTTCTGCCTTTCTATAATTGCTGCTGCCCGCCCCTCTCATTCTCTCTACCCTTCCATTTTTCATCACTTTGAACCTATATTTTCTAAATCAACAATCTCTTTCATCTTCATCTTCATCTCACCTAGCGATTCTATCCATTTGATTCATCGGTTTCCTCTTTTTTCATCTTCACCTGTTCTTGTATGACGATTCAATCTTCTTCTGCTTCGTTTCCATAATCAGATTTGGTTTCTTCGTTTTTTCTCTGTAAGAGAAGATGAAATTCTGTTCTTCGGACAGAATCGGAGTTAGACAGTACAATAAATCGGAGCTTCCACGTCTGCGGTGGACGCCGGAGCTTCATCGGTACTTTGTTCAGACAGTCGAGATCCTCGGCGGAAGAAATCGTAAGTAATTTATTTATTGATTAGTACTCAAAGCTTTTATTTCGTTCATTTCGCGGCCAGTTTTGGCTTTGGAATTGGAAGACTGTTTCGGAAAACATGAGAGAGGAGAGAGAGAGCGATTATGCGCGATCGTCCGTATTCGAATCTTTGATTGCCTTTTTTCTGAAGATCTGACTTGTTGCAGAAGCAACGCCGAAAAAAATCCTGCAAATGATGGGAGTGAAAGGACTGAAGATTTCACACATAAAGAGCCATTTACAGGTACTTTTTCGAAATTGAATTTTGATATAACGCTTAATTTTCATCGCTATTTCCGTTCGGTTGAGTGATTCCTTTTTTTCTTCTATATATATATTTCAATTGCATTTCCTCATCTATTCACAAAACAAAACTTCTCTGATTTATTTTCTCATTCGTTTGTTAATATAGTTCGTTGCGCGATCTGATCATGCTTGATTCTCAATATTTCCTCGTGCTAAAATAGTTCGTATAAACTTGATCGAGTTCTAGTCTGCTGAATCTATCTCATAGACGTATCACAAAACAATATACAAATCCACTGAATAAACACATGTTTGTACAGGAATCATACATACGAAACATATTTTGTTAAGTAGATTAGAGTTTTTGTAACACATAATTAAACTCAAAATTAGCAAAATTAATGAAACAAATACGATCTGTAATTAAAATGAATCTATTATTCAAATATTTGAATGAGGCTAAGTGAGTAGAGTAGGACTCTCTCTTTCTCTCTCTAAATGTGAAAATGGAATTAAGCCAAACAGATAAGATTAATAGCTAATTCATAGGGATAGGATTAGGACATTGGTTTTTAATTAATTAAAGAAGCTTTTCTCTTCGTCTTCTACTTTTTTTTTCCTTTTAGAAATTAAAATAAAGAGTTAAGTTTTGGTTAGGTAGATTCCATACATCGGGACGGAAAAAAGTAGCCTTTTTAATTCAATTAAATATGAAATTAAAGACAAAGAAGTAGAATAATTATGAGTTCTTGCATGGCGACGCTACTCTTAATAGGCTAAATTATAGATTTGGTTTGATTTTAGATACACATTCCTAAATATAACAATCATCTCCAAACATGCATATTACCAAATACATTTCTAAATATAACAATCATGTCCAAAGGATGTAATATAACAATCATGTTCAAAGGATTAACATGCATTAACAAACAAAATTAGATATTGTAATTCTTTTAAAATATTGTTATATATTAAATTATTAATGTTAAAAATGTTACTTATTTCAATTCACGTTTAAAAATTAGAGTTTATTTTTTTACAATTTAATAAATAGTATGATATATCTAATCACTTGTCGTATTTATAATATGTAAAATGGAGGTTCTATAGATTGTTTTTTAAATTTTTTTTAATTACAAAACTATTGAAAATATTTTTAATTGTGATAAACACAATAAATTATTATTTGTATTTAACTATAATATTTATAAATATATATTTAAAATATAAATTAATTCTATTATTTATGATGTATTTTGAGTAGATGTACAGAAGCATTAAATTAGAAAATGGGAGTAAGTGCGAGGATTTAGTGATGAGACAAGGCATGAAGCACAGAAGAAGAAGAACATTGCACTCTTGTGATATCAAAACCTTCTTCTCTTCGATCACCTCTTCCAACGAGTACGTTCCTCAATTTTCTTTTCTCTTCTCATATACCATCGTTTCCAAAATTATTTTAAATTATAAAACTATATAAAAAAATTATTTATAAATATAACAAAATTTTATAATTTATAGAAGATTGATGTAGATTTTTATTGGTATTTATCAATGTCTGTGTCTATCAATGTCTATAATAGGTAGGTGTCGATATCAAATTTTTTTAAATATTTTGATTCATTTTTTTATATTTGAAAATAAGTCCTATTATTATTATTAATGATTTTTATCGAGAATCTAAATCATTAGGTGCACATAGAGTTTATAACTGGAGTAAAAGTAAAATTTAAATAGAACATATCATTTTTAAAAAAGAAATTGATACGTGATAAGCATTCATTATCGGGTGTGGATTGGGTTACACAAAAGGATACGGGTGCTTTTCAAAAAAAAAAAAAAAAAAGAAGAAGAATTTCTAAATCGTTTCCTTAACTTCCATCTCATTTGAAAACTATTTTAATTTTTAGATTTTACTTTTCAAAATTGAATTTATAAACATTACTTCTCCTCAAAACAAATTTATTTGTTTTATTATAAACTTTATAGAGATGTTTGAAGACTTCATTTAAGACATGGTTTAAGAAATGTGAAAACCATGGAAAGAAAACAAGTACAATTTTTTAAAGAAAAAAACCTATATTATCTATGAGTATTGCATTTATGTATTTTGAAAATTTAAGCTTATAACTAAAGGTGTCCTTGTTTCCTTGAGGGTTTTTTAGAAATGTCTTGAAAATTCAATCTAATTTTAAAACCTAGAAATAAAAATATATTTTTGAAAAAGAAAAAGAAATATTTGAGTATAAATTCTGAAATGATTTATAAGATTAAAATCCAGATTGGTTACAAATGTGTGAAAATTTTATTTTAATAAGATAAGCGAATATAAATAAAGAAACTCAATAATAAGAATTAAGAATGGTTGGAGACATTATATACTTATATACGTGCATGGCCCTATGCATATCTATAAGATTAATAAATAAACCGGATAGCAATCACTCTTTCTTTCTTTCTTTCTTTCTGTTCATTTTCTAATCTTTTTTTTAAAGTTGTATGGTTTCAACTTATTTTGAGAAATATTGTAGTTTTTAAAAAGATCACAAAGTGAAGAAACGACCTTCCTAAAAAACTACTCTTCACACAAAAACCTAGAATTTGTTTATAAAAAAAAAGATGAGAAGAAATAAAAGGTGGCATGTCGTATCTTAGCTTTCTTTTCCATTTCAATAAAAGGTTCTTTTTTCATCAATAGACTTATTGGGGAAGATAAGAAGATACCCAAATGTTAAAGAATGCTTTGAACCTGACTTCCATCTCATTTCATTTCTCATATTTGGTTTCATTGTAGCTACAATATTTATCTCTGTCATTTTTTAAAACTATTTATTTTTAGAGGCTTTTCAAAAAAAAATTACATTCTATAGGAAAAATAACCCATCATCACACCTAGTTTTATCGGATTTTTCTAAGATGCGTAAATATTTTGTTTTTGGATTTCTTGTTCTTGTGTGTGTGTTTTTTTTTTTTTTTTGTCATTCTTTTTTATTTTATTTTAATAAACCCTCTTTAAAAAAACAATATTTAAAAAAAAATCGAGTAACGGAAGATGGAGTTTGTTTTTTTTAAAAAATCTATTTTTTACTCTCATACTCTTGGAGTGGTTATGGTTAATGACAAAACATAGTCAACATATAGGAAAAATTTCAGTCTTTGCCTTTTTTGTTTTAGAATAAATAACAAACAAACAAAGCATGCATTCACACAAAATTTATATTACACAATTAAAGGGGTTCTTTTTTCTAATACAAATAAATTATTTTTCTTTTTATAAATACGATAGGGTGAGTGGAAACTACCAATAAATTTTGTTGGGAACACAATTACAAATTCAAATATAGTTTATTTTCTCTTCATTCTTATATTTAAGGGTTTACGTTTGAGATTGAGATCAAATACTTCTTACATTATATTATTTAACTGATATGTACACAAATATATGATGTCACTTTCATCATAAAACCTTTGAAATATCAATTTGTATTTTGAAAAATTATTGTAAATGAAAATACTCACTTATCATCCATATAATCTAAAATTTTACAAAATTTTATAAATATTTCATTTGGTTTTATTTGAAAATACTCCTTTTTTATGACAATTTTATTATATTTAAATATATTTTATAAAACAATGTTAAAAATAAATTATATATTTATTACTGATCCGTATCCAATATTTTGCAGAATACTGAGAGAAGAAGATGAGTTCTGCAGAGATAAAACAAAAGACGAACCTTCCTCCAACATAAAAGACAGAATTATTTATCAACAGGTAATCATTGCTCCAAATTTTTATTTTATTTTATTTAAAATATCATATTCATTTTATAGTCAATTATTTCATCTAACACATTGTCACCATTACCATTCTTTTCTTTTCTTTTCTTTTTTTCTAATTTTGAAAATAATCCTAATACATATTATTAATTTATATGTAAAATTTCAATTTTAAAGTTTTGATAAACGTAATTGATTTGAAATTTTAAATATATAATTACTGTTTCAAAGTTGAAAACTAGAAACTAAATTATCTCATGAGAAATAGAACTTCCAAATAACCGTGAACATAAAATGAAATGAAATAATAACGGAAATTTGCAAATTGAAACATTTGTAGGCTTCAGAATCAGAGTCAGAGTCGGAGGAGGAATGCGTCGGGGAGTCGATGTTAGAGGACCAAACATGTGATTGTGAACTCACATTGTCCCTCAAACCCTCAATGACACAGCAAATTGTAGAGAGACAGTTAAGTGATAATCAAGATAACAACACCTCCTCTTCCAATTCCAATTCCAATTCTCTGTCCTCCATTTCCCAACTCAATTTTAAGTTTGTAAAGCTGAAAGATTTCCCCCATCCTCACCATCATATCAATTTGGACCTAACCATATGAGAAACCGTAAACTCTTCCATTATATTCATAGCTTTACCCATATTTTATGTTAGATTACATGTCAAAAGTTTTGTTTGTTTGTTCATTAAAAAGAAATATACATCT

Coding sequence (CDS)

ATGAAATTCTGTTCTTCGGACAGAATCGGAGTTAGACAGTACAATAAATCGGAGCTTCCACGTCTGCGGTGGACGCCGGAGCTTCATCGGTACTTTGTTCAGACAGTCGAGATCCTCGGCGGAAGAAATCAAGCAACGCCGAAAAAAATCCTGCAAATGATGGGAGTGAAAGGACTGAAGATTTCACACATAAAGAGCCATTTACAGATGTACAGAAGCATTAAATTAGAAAATGGGAGTAAGTGCGAGGATTTAGTGATGAGACAAGGCATGAAGCACAGAAGAAGAAGAACATTGCACTCTTGTGATATCAAAACCTTCTTCTCTTCGATCACCTCTTCCAACGAAATACTGAGAGAAGAAGATGAGTTCTGCAGAGATAAAACAAAAGACGAACCTTCCTCCAACATAAAAGACAGAATTATTTATCAACAGGCTTCAGAATCAGAGTCAGAGTCGGAGGAGGAATGCGTCGGGGAGTCGATGTTAGAGGACCAAACATGTGATTGTGAACTCACATTGTCCCTCAAACCCTCAATGACACAGCAAATTGTAGAGAGACAGTTAAGTGATAATCAAGATAACAACACCTCCTCTTCCAATTCCAATTCCAATTCTCTGTCCTCCATTTCCCAACTCAATTTTAAGTTTGTAAAGCTGAAAGATTTCCCCCATCCTCACCATCATATCAATTTGGACCTAACCATATGA

Protein sequence

MKFCSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLKISHIKSHLQMYRSIKLENGSKCEDLVMRQGMKHRRRRTLHSCDIKTFFSSITSSNEILREEDEFCRDKTKDEPSSNIKDRIIYQQASESESESEEECVGESMLEDQTCDCELTLSLKPSMTQQIVERQLSDNQDNNTSSSNSNSNSLSSISQLNFKFVKLKDFPHPHHHINLDLTI

Homology

[Close]

BLAST of Cucsat.G9021 vs. ExPASy Swiss-Prot
Match: A0A0P0X0C0 (Myb family transcription factor MPH1 OS=Oryza sativa subsp. japonica OX=39947 GN=MPH1 PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.6e-23
Identity = 49/67 (73.13%), Postives = 61/67 (91.04%), Query Frame = 0


Query: 7  DRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLKISHIKS 66
          +R GVRQYN+SE+PR+RWT E+HR FV+ VE LGG+++ATPK+ILQ+MGVKG+ ISHIKS
Sbjct: 5  ERRGVRQYNRSEVPRMRWTEEMHRQFVEAVECLGGQDEATPKRILQLMGVKGVSISHIKS 64

Query: 67 HLQMYRS 74
          HLQMYRS
Sbjct: 65 HLQMYRS 71

[Close]

BLAST of Cucsat.G9021 vs. ExPASy Swiss-Prot
Match: A3AWH5 (Myb family transcription factor MOF1 OS=Oryza sativa subsp. japonica OX=39947 GN=MOF1 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.3e-19
Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 0


Query: 11 VRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLKISHIKSHLQM 70
          VRQY +S++PRLRWT ELH  FVQ +E LGG+++ATPK ILQ+MGVKGL ISH+KSHLQM
Sbjct: 14 VRQYIRSKVPRLRWTGELHCSFVQAIEFLGGQDKATPKLILQLMGVKGLTISHVKSHLQM 73

Query: 71 YRSIKL 77
          YR  +L
Sbjct: 74 YRCSRL 79

[Close]

BLAST of Cucsat.G9021 vs. ExPASy Swiss-Prot
Match: Q700D9 (Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana OX=3702 GN=At1g14600 PE=2 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 1.7e-19
Identity = 47/87 (54.02%), Postives = 62/87 (71.26%), Query Frame = 0


Query: 10  GVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLKISHIKSHLQ 69
           GVR Y +S +PRLRWTPELHR FV  V++LGG+ +ATPK +L++M VKGL ISH+KSHLQ
Sbjct: 14  GVRPYVRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQ 73

Query: 70  MYRSIKLENGSKCEDLVMRQGMKHRRR 97
           MYR  ++    K E+       + RR+
Sbjct: 74  MYRGSRITLLGKPEESSSPSSRRRRRQ 100

[Close]

BLAST of Cucsat.G9021 vs. ExPASy Swiss-Prot
Match: Q9FJV5 (Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.6e-15
Identity = 40/89 (44.94%), Postives = 62/89 (69.66%), Query Frame = 0


Query: 2   KFCSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLKI 61
           K  SS  +G+++  ++  PR+RWT  LH +FV  V++LGG  +ATPK +L++M VK L +
Sbjct: 90  KRSSSSMVGLKRSIRA--PRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTL 149

Query: 62  SHIKSHLQMYRSIK-LENGSKCEDLVMRQ 90
           +H+KSHLQMYR++K  + GS  E  V ++
Sbjct: 150 AHVKSHLQMYRTVKCTDKGSPGEGKVEKE 176

[Close]

BLAST of Cucsat.G9021 vs. ExPASy Swiss-Prot
Match: Q93WJ9 (Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.2e-14
Identity = 34/59 (57.63%), Postives = 45/59 (76.27%), Query Frame = 0


Query: 20  PRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLKISHIKSHLQMYRSIKLEN 79
           PR+RWT  LH  FV  VE+LGG  +ATPK +L++M VK L ++H+KSHLQMYR++K  N
Sbjct: 220 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTN 278

[Close]

BLAST of Cucsat.G9021 vs. NCBI nr
Match: XP_011653983.1 (myb family transcription factor PHL12 [Cucumis sativus] >KGN54943.1 hypothetical protein Csa_012635 [Cucumis sativus])

HSP 1 Score: 460 bits (1184), Expect = 3.36e-163
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MKFCSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLK 60
           MKFCSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLK
Sbjct: 1   MKFCSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSIKLENGSKCEDLVMRQGMKHRRRRTLHSCDIKTFFSSITSSNEILRE 120
           ISHIKSHLQMYRSIKLENGSKCEDLVMRQGMKHRRRRTLHSCDIKTFFSSITSSNEILRE
Sbjct: 61  ISHIKSHLQMYRSIKLENGSKCEDLVMRQGMKHRRRRTLHSCDIKTFFSSITSSNEILRE 120

Query: 121 EDEFCRDKTKDEPSSNIKDRIIYQQASESESESEEECVGESMLEDQTCDCELTLSLKPSM 180
           EDEFCRDKTKDEPSSNIKDRIIYQQASESESESEEECVGESMLEDQTCDCELTLSLKPSM
Sbjct: 121 EDEFCRDKTKDEPSSNIKDRIIYQQASESESESEEECVGESMLEDQTCDCELTLSLKPSM 180

Query: 181 TQQIVERQLSDNQDNNTSSSNSNSNSLSSISQLNFKFVKLKDFPHPHHHINLDLTI 236
           TQQIVERQLSDNQDNNTSSSNSNSNSLSSISQLNFKFVKLKDFPHPHHHINLDLTI
Sbjct: 181 TQQIVERQLSDNQDNNTSSSNSNSNSLSSISQLNFKFVKLKDFPHPHHHINLDLTI 236

[Close]

BLAST of Cucsat.G9021 vs. NCBI nr
Match: XP_008466796.1 (PREDICTED: putative Myb family transcription factor At1g14600 [Cucumis melo])

HSP 1 Score: 427 bits (1099), Expect = 2.54e-150
Identity = 221/236 (93.64%), Postives = 227/236 (96.19%), Query Frame = 0


Query: 1   MKFCSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLK 60
           MK CSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLK
Sbjct: 1   MKSCSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSIKLENGSKCEDLVMRQGMKHRRRRTLHSCDIKTFFSSITSSNEILRE 120
           ISHIKSHLQMYRSIKLENGS+CEDLVMRQG+KHRRRRTLHSCDIKTFFSSI+SSNEILRE
Sbjct: 61  ISHIKSHLQMYRSIKLENGSQCEDLVMRQGVKHRRRRTLHSCDIKTFFSSISSSNEILRE 120

Query: 121 EDEFCRDKTKDEPSSNIKDRIIYQQASESESESEEECVGESMLEDQTCDCELTLSLKPSM 180
           E+E CRDKTKDEPSSNIKDRIIYQQ S+SESESEEECVGESMLEDQTCDCELTLSLKPSM
Sbjct: 121 EEELCRDKTKDEPSSNIKDRIIYQQDSDSESESEEECVGESMLEDQTCDCELTLSLKPSM 180

Query: 181 TQQIVERQLSDNQDNNTSSSNSNSNSLSSISQLNFKFVKLKDFPHPHHHINLDLTI 236
           TQQI+ERQLSDNQDNNTSSSNS      SISQLNFKFVKLKDFPHPHHHINLDLTI
Sbjct: 181 TQQILERQLSDNQDNNTSSSNS-----ISISQLNFKFVKLKDFPHPHHHINLDLTI 231

[Close]

BLAST of Cucsat.G9021 vs. NCBI nr
Match: XP_038899444.1 (myb family transcription factor MPH1-like [Benincasa hispida])

HSP 1 Score: 338 bits (867), Expect = 5.20e-115
Identity = 191/238 (80.25%), Postives = 205/238 (86.13%), Query Frame = 0


Query: 1   MKFCSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLK 60
           MK  SS+RIGVRQYNKSELPRLRWTPELHRYFV+TVEILGGRNQATPK+ILQMMGVKGLK
Sbjct: 1   MKSNSSERIGVRQYNKSELPRLRWTPELHRYFVRTVEILGGRNQATPKRILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSIKLENGSKCEDLVMRQGMKHRRRRTLHSCDIKTFFSSITSSNEILRE 120
           ISHIKSHLQMYRSIKLENGSKCED+VM QGMK  RRRTLHS DIKTF SS++SS+ IL E
Sbjct: 61  ISHIKSHLQMYRSIKLENGSKCEDVVMSQGMKQTRRRTLHSSDIKTFLSSVSSSSGILGE 120

Query: 121 EDEFCRDKTKDEPSSNIKDRIIYQQAS--ESESESEEECVGESMLEDQTCDCELTLSLKP 180
           E+EF R     + SSNIKDRII QQ S  ESESESEEEC+G SMLEDQTCDCELTLSLKP
Sbjct: 121 EEEFKRSDRIHKSSSNIKDRIISQQDSDSESESESEEECIGGSMLEDQTCDCELTLSLKP 180

Query: 181 SMTQQIVERQLSDNQDNNTSSSNSNSNSLSSISQLNFKFVKLKDFPHPHHHINLDLTI 236
           SMTQQI+ERQLSD QDNN+SS     NS+S ISQLNF  V LK+F HPH HINLDLTI
Sbjct: 181 SMTQQILERQLSD-QDNNSSS-----NSIS-ISQLNF--VHLKEFSHPHRHINLDLTI 229

[Close]

BLAST of Cucsat.G9021 vs. NCBI nr
Match: XP_023525384.1 (probable transcription factor KAN3 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276 bits (707), Expect = 1.21e-90
Identity = 161/250 (64.40%), Postives = 187/250 (74.80%), Query Frame = 0


Query: 1   MKFCSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLK 60
           MK CSS+RIGVRQYNKSELPRLRWTP LHRYFVQTVE+LGGRNQATPK+ILQMMGVKGLK
Sbjct: 1   MKSCSSERIGVRQYNKSELPRLRWTPALHRYFVQTVEVLGGRNQATPKRILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSIKLENGSKCEDLVMRQGMKHRRRRTLHSCDIKTFFSSITSSNEILRE 120
           ISHIKSHLQMYRS+K E+GS CE ++M+Q M+  RRRTLHS DIK F SS++SS+ ILRE
Sbjct: 61  ISHIKSHLQMYRSMKSEHGSSCEHVMMKQAMEQTRRRTLHSSDIKIFMSSVSSSSGILRE 120

Query: 121 EDEFCRDKTKDEPSSNIKDRIIYQQASESESES----EEECVGESMLEDQTCDCELTLSL 180
           E+EF R   K + SSNI+DRII QQ S+S  ES    E EC+G SMLEDQTC  EL+LSL
Sbjct: 121 EEEFNRSNGKHDSSSNIEDRIISQQDSDSSLESRMSEEVECIGGSMLEDQTC--ELSLSL 180

Query: 181 KPS----MTQQIVERQLS------DNQDNNTSSSNSNSNSLSSISQLNFKFVKLKDFPHP 236
           KP+    +TQQI++RQL        +Q  NTS +                FV+L +FPHP
Sbjct: 181 KPTHHSPITQQILQRQLQLCPTIPHHQHPNTSPN----------------FVRLNEFPHP 231

[Close]

BLAST of Cucsat.G9021 vs. NCBI nr
Match: XP_022982449.1 (probable transcription factor KAN3 [Cucurbita maxima])

HSP 1 Score: 276 bits (706), Expect = 1.71e-90
Identity = 161/250 (64.40%), Postives = 187/250 (74.80%), Query Frame = 0


Query: 1   MKFCSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLK 60
           MK CSS+RIGVRQYNKSELPRLRWTP LHRYFVQTVE+LGGRNQATPK+ILQMMGVKGLK
Sbjct: 1   MKSCSSERIGVRQYNKSELPRLRWTPALHRYFVQTVEVLGGRNQATPKRILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSIKLENGSKCEDLVMRQGMKHRRRRTLHSCDIKTFFSSITSSNEILRE 120
           ISHIKSHLQMYRS+KLE+GS CE ++++Q M+  RRRTLHS DIK F SS++SS+ ILRE
Sbjct: 61  ISHIKSHLQMYRSMKLEHGSSCEHVMLKQAMEQTRRRTLHSSDIKIFMSSVSSSSGILRE 120

Query: 121 EDEFCRDKTKDEPSSNIKDRIIYQQASESESES----EEECVGESMLEDQTCDCELTLSL 180
           E+EF R   K + SSNI+DRII QQ S+S  ES    E EC+G SMLEDQTC  EL+LSL
Sbjct: 121 EEEFNRSNGKHDSSSNIEDRIISQQDSDSSLESRMSEEVECIGGSMLEDQTC--ELSLSL 180

Query: 181 KPS----MTQQIVERQLS------DNQDNNTSSSNSNSNSLSSISQLNFKFVKLKDFPHP 236
           KP+    +TQQI+ERQL        +Q  NTS +                FV+  +FPHP
Sbjct: 181 KPTHHSPITQQILERQLQLCPTIPHHQHPNTSPN----------------FVRPNEFPHP 231

[Close]

BLAST of Cucsat.G9021 vs. ExPASy TrEMBL
Match: A0A0A0KZQ0 (HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G614170 PE=4 SV=1)

HSP 1 Score: 460 bits (1184), Expect = 1.63e-163
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0


Query: 1   MKFCSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLK 60
           MKFCSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLK
Sbjct: 1   MKFCSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSIKLENGSKCEDLVMRQGMKHRRRRTLHSCDIKTFFSSITSSNEILRE 120
           ISHIKSHLQMYRSIKLENGSKCEDLVMRQGMKHRRRRTLHSCDIKTFFSSITSSNEILRE
Sbjct: 61  ISHIKSHLQMYRSIKLENGSKCEDLVMRQGMKHRRRRTLHSCDIKTFFSSITSSNEILRE 120

Query: 121 EDEFCRDKTKDEPSSNIKDRIIYQQASESESESEEECVGESMLEDQTCDCELTLSLKPSM 180
           EDEFCRDKTKDEPSSNIKDRIIYQQASESESESEEECVGESMLEDQTCDCELTLSLKPSM
Sbjct: 121 EDEFCRDKTKDEPSSNIKDRIIYQQASESESESEEECVGESMLEDQTCDCELTLSLKPSM 180

Query: 181 TQQIVERQLSDNQDNNTSSSNSNSNSLSSISQLNFKFVKLKDFPHPHHHINLDLTI 236
           TQQIVERQLSDNQDNNTSSSNSNSNSLSSISQLNFKFVKLKDFPHPHHHINLDLTI
Sbjct: 181 TQQIVERQLSDNQDNNTSSSNSNSNSLSSISQLNFKFVKLKDFPHPHHHINLDLTI 236

[Close]

BLAST of Cucsat.G9021 vs. ExPASy TrEMBL
Match: A0A1S3CS11 (putative Myb family transcription factor At1g14600 OS=Cucumis melo OX=3656 GN=LOC103504120 PE=4 SV=1)

HSP 1 Score: 427 bits (1099), Expect = 1.23e-150
Identity = 221/236 (93.64%), Postives = 227/236 (96.19%), Query Frame = 0


Query: 1   MKFCSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLK 60
           MK CSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLK
Sbjct: 1   MKSCSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSIKLENGSKCEDLVMRQGMKHRRRRTLHSCDIKTFFSSITSSNEILRE 120
           ISHIKSHLQMYRSIKLENGS+CEDLVMRQG+KHRRRRTLHSCDIKTFFSSI+SSNEILRE
Sbjct: 61  ISHIKSHLQMYRSIKLENGSQCEDLVMRQGVKHRRRRTLHSCDIKTFFSSISSSNEILRE 120

Query: 121 EDEFCRDKTKDEPSSNIKDRIIYQQASESESESEEECVGESMLEDQTCDCELTLSLKPSM 180
           E+E CRDKTKDEPSSNIKDRIIYQQ S+SESESEEECVGESMLEDQTCDCELTLSLKPSM
Sbjct: 121 EEELCRDKTKDEPSSNIKDRIIYQQDSDSESESEEECVGESMLEDQTCDCELTLSLKPSM 180

Query: 181 TQQIVERQLSDNQDNNTSSSNSNSNSLSSISQLNFKFVKLKDFPHPHHHINLDLTI 236
           TQQI+ERQLSDNQDNNTSSSNS      SISQLNFKFVKLKDFPHPHHHINLDLTI
Sbjct: 181 TQQILERQLSDNQDNNTSSSNS-----ISISQLNFKFVKLKDFPHPHHHINLDLTI 231

[Close]

BLAST of Cucsat.G9021 vs. ExPASy TrEMBL
Match: A0A6J1J4K7 (probable transcription factor KAN3 OS=Cucurbita maxima OX=3661 GN=LOC111481270 PE=4 SV=1)

HSP 1 Score: 276 bits (706), Expect = 8.29e-91
Identity = 161/250 (64.40%), Postives = 187/250 (74.80%), Query Frame = 0


Query: 1   MKFCSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLK 60
           MK CSS+RIGVRQYNKSELPRLRWTP LHRYFVQTVE+LGGRNQATPK+ILQMMGVKGLK
Sbjct: 1   MKSCSSERIGVRQYNKSELPRLRWTPALHRYFVQTVEVLGGRNQATPKRILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSIKLENGSKCEDLVMRQGMKHRRRRTLHSCDIKTFFSSITSSNEILRE 120
           ISHIKSHLQMYRS+KLE+GS CE ++++Q M+  RRRTLHS DIK F SS++SS+ ILRE
Sbjct: 61  ISHIKSHLQMYRSMKLEHGSSCEHVMLKQAMEQTRRRTLHSSDIKIFMSSVSSSSGILRE 120

Query: 121 EDEFCRDKTKDEPSSNIKDRIIYQQASESESES----EEECVGESMLEDQTCDCELTLSL 180
           E+EF R   K + SSNI+DRII QQ S+S  ES    E EC+G SMLEDQTC  EL+LSL
Sbjct: 121 EEEFNRSNGKHDSSSNIEDRIISQQDSDSSLESRMSEEVECIGGSMLEDQTC--ELSLSL 180

Query: 181 KPS----MTQQIVERQLS------DNQDNNTSSSNSNSNSLSSISQLNFKFVKLKDFPHP 236
           KP+    +TQQI+ERQL        +Q  NTS +                FV+  +FPHP
Sbjct: 181 KPTHHSPITQQILERQLQLCPTIPHHQHPNTSPN----------------FVRPNEFPHP 231

[Close]

BLAST of Cucsat.G9021 vs. ExPASy TrEMBL
Match: A0A6J1FNB8 (probable transcription factor KAN4 OS=Cucurbita moschata OX=3662 GN=LOC111445813 PE=4 SV=1)

HSP 1 Score: 268 bits (685), Expect = 1.24e-87
Identity = 160/250 (64.00%), Postives = 185/250 (74.00%), Query Frame = 0


Query: 1   MKFCSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLK 60
           MK CSS+RIGVRQYNKSELPRLRWTP LHRYFVQTVE+LGGRNQATPK+ILQMMGVKGLK
Sbjct: 1   MKSCSSERIGVRQYNKSELPRLRWTPALHRYFVQTVEVLGGRNQATPKRILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSIKLENGSKCEDLVMRQGMKHRRRRTLHSCDIKTFFSSITSSNEILRE 120
           ISHIKSHLQMYRS+K E+GS CE ++M+Q M+   RRTLHS DIK F SS++SS+ ILRE
Sbjct: 61  ISHIKSHLQMYRSMKSEHGSSCEHVMMKQAMEQT-RRTLHSSDIKIFMSSVSSSSGILRE 120

Query: 121 EDEFCRDKTKDEPSSNIKDRIIYQQASESESES----EEECVGESMLEDQTCDCELTLSL 180
           E+EF R   K + SSNI+DRII QQ S+S  ES    E EC+G SMLEDQTC  EL+LSL
Sbjct: 121 EEEFNRSNGKHDSSSNIEDRIISQQDSDSSLESRMSEEVECIGGSMLEDQTC--ELSLSL 180

Query: 181 KPS----MTQQIVERQLS------DNQDNNTSSSNSNSNSLSSISQLNFKFVKLKDFPHP 236
           KP+    +TQQI+ERQL        +Q  NTS +                FV+L +FPHP
Sbjct: 181 KPTHHSPITQQILERQLQLCPTIPHHQHPNTSPN----------------FVRLDEFPHP 230

[Close]

BLAST of Cucsat.G9021 vs. ExPASy TrEMBL
Match: A0A6J1IGV1 (putative Myb family transcription factor At1g14600 OS=Cucurbita maxima OX=3661 GN=LOC111477099 PE=4 SV=1)

HSP 1 Score: 256 bits (654), Expect = 5.93e-83
Identity = 154/243 (63.37%), Postives = 179/243 (73.66%), Query Frame = 0


Query: 1   MKFCSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLK 60
           MK CSS+RIGVR+YNKSELPRLRWTPELHRYFVQTVEILGGRNQATPK+ILQMMGVKGLK
Sbjct: 1   MKSCSSERIGVRRYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSIKLENGS--KCEDLVMRQGMKHRRRRTLHSCDIKTFFSSITSSNEIL 120
           ISHIKSHLQMYRS+KLE GS  + ED+V++Q  K  R RTLHS DIK F SS++SS+  L
Sbjct: 61  ISHIKSHLQMYRSMKLEQGSSSRFEDVVLKQATKQTRGRTLHSSDIKIFLSSVSSSSGTL 120

Query: 121 REEDEFCRDKTKDEPSSNIKDRIIYQQASESESESEEECVGESMLEDQ--TCDCELTLSL 180
           REE+EF R K + + SS IKD II QQ S+S  +S    + E ML+DQ   CDCEL+LSL
Sbjct: 121 REEEEFNRSKREHKSSSIIKDSIISQQDSDSCLQSR---MSEEMLDDQEEACDCELSLSL 180

Query: 181 KPS---MTQQIVERQLSDNQDNNTSSSNSNSNSLSSISQLNFKFVKLKDFPHPHHHINLD 236
           KP+   MTQQ+  + +S       SSSNS S  +       F FV+LK FP P H  NLD
Sbjct: 181 KPTRSPMTQQLCGQDVS-------SSSNSTSPQI-----YQFNFVQLKQFPLPPHLTNLD 228

The following BLAST results are available for this feature:

BLAST of Cucsat.G9021 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A0P0X0C0	2.6e-23	73.13	Myb family transcription factor MPH1 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
A3AWH5	1.3e-19	69.70	Myb family transcription factor MOF1 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q700D9	1.7e-19	54.02	Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana OX=37...	[more]
Q9FJV5	2.6e-15	44.94	Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 ...	[more]
Q93WJ9	2.2e-14	57.63	Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1	[more]

BLAST of Cucsat.G9021 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653983.1	3.36e-163	100.00	myb family transcription factor PHL12 [Cucumis sativus] >KGN54943.1 hypothetical...	[more]
XP_008466796.1	2.54e-150	93.64	PREDICTED: putative Myb family transcription factor At1g14600 [Cucumis melo]	[more]
XP_038899444.1	5.20e-115	80.25	myb family transcription factor MPH1-like [Benincasa hispida]	[more]
XP_023525384.1	1.21e-90	64.40	probable transcription factor KAN3 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022982449.1	1.71e-90	64.40	probable transcription factor KAN3 [Cucurbita maxima]	[more]

BLAST of Cucsat.G9021 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZQ0	1.63e-163	100.00	HTH myb-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G61417...	[more]
A0A1S3CS11	1.23e-150	93.64	putative Myb family transcription factor At1g14600 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1J4K7	8.29e-91	64.40	probable transcription factor KAN3 OS=Cucurbita maxima OX=3661 GN=LOC111481270 P...	[more]
A0A6J1FNB8	1.24e-87	64.00	probable transcription factor KAN4 OS=Cucurbita moschata OX=3662 GN=LOC111445813...	[more]
A0A6J1IGV1	5.93e-83	63.37	putative Myb family transcription factor At1g14600 OS=Cucurbita maxima OX=3661 G...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 20..74 e-value: 1.5E-22 score: 77.7
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 22..72 e-value: 3.1E-7 score: 30.5
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 16..76 score: 12.344003
None	No IPR available	GENE3D	1.10.10.60		coord: 19..76 e-value: 1.5E-25 score: 91.0
None	No IPR available	PANTHER	PTHR31314:SF2	MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN	coord: 8..104
IPR044848	PHR1-like	PANTHER	PTHR31314	MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE	coord: 8..104
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 20..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G9021.T1	Cucsat.G9021.T1	mRNA
Cucsat.G9021.T2	Cucsat.G9021.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity