Cucsat.G8508 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G8508
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	transmembrane protein 33 homolog isoform X1
Location	ctg1557: 3384816 .. 3388532 (-)
RNA-Seq Expression	Cucsat.G8508
Synteny	Cucsat.G8508

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGTGTTGGTTCTACCAAACCGAATAAAAACTAGATACCGAATGAAAGTAAAACTCAAAACTAATACCTTTTGAAAGTTGAGAGTAGAATTCTTCTCAATTAATTTAGGATTAAAACGACATCGTTTCTTGAGCCAATGGGAAAGAGAATCTATACTCTTTGGTAAACGTCGTTCACTAGTGGAAAGTAAATCGGCATAAATTTTCTCTCCATTTTTCTTGCCGATAGAAATCTTGTTGTTTCCAGAACAACAGCAGCAACAAGCAGAAGAACGAAGAAATGGGGGAAGAACAAGATGGTTCGCAGAGGCTTAAGAGGACAGCGGCAGCATCATACGACTACGAGAACGATCCCAGATGGGCTGATTATTGGTCCAACATTTTGATTCCTCCTAACATGGCGTCTCGCTCTGATGTTGTTGATCATTACAAGCGGAAGTTTTACCAGAGATACATCGTGGGTTCTCTTCCTTTTGGTTGTTTTCGATTTGGGTATCCCTGTTTTCTTCAATTTAGACTCTGTACTCACTAATTCTTTATTGGGGTTGTTTTCTTTTTATTGGATTATTACGTTGTTGTGGGTTTTGAGATTTGAACTTAACTCTTTTTGTTGATTTTGTATTATCTCATTTGGTTCTTGCTAATTTATGCTTGTTAGTGCAATTTCTATTGGGAATTTTCACTTTTTGGATTTTTAGATTTCTTGTGGGTTTTGGGTTCTTGGAGTTGAGAGAAGATGTGCAAGTTCAATTACAAGGAAATCAGTTAAAATCTTTAACTTTTTTTTTTTTTTGTTTAAGCTGCGAAATGGGGCATTTGTTTTAACTGTCTTCTTTTATTGAATTTGTGTTCTTTGATGGTTGCTGAGAGTTCAAGTGTTCTCTTGCATTTGTTTTAAATTTTTAGTTTGTGCTTTTTCAAAACAGGATCCTGAACTTGTAGTAGAAGCCATGTCTTCAAGTAGTTCAACTCAGTCATCTAGACCTTCAGCAACATCTTCCGCAGCAACCTCTCCTACTAATGATCGAAGTCGACCACGAAGTTCAGGTAGAAGTTCAGTTGTTTTCCCCTCATAGTGTTAGACATCAAGATCTAAATAATTCTTTGATGTTCATGTTGAATTTACCTGATTGCATTTCTGCAACACATTGCTTGTAATGAAGCAGGATCGACGTCTAGGACTTCAGGTACATCTGCTAGTGCAGATGCTAATCCAACACCCTTGCGCTGGGATCGGCAAACAATTCAGTTTTCTGTCAATGCATGGGTAGGCAGTTTATATCATGTTTTTTGTATAGCTACGAAATGTTTGAGGGCTACAGCATACACAATGTTATTTATGTATTTTGTTTCCTCCTTAAATTGGAAGTGCTGCTTTTCTGAAAGTTTGTATGAACTTTTAATTACAAAAGTATCCGAAATGTTTTTCTCTTCCTTCTCTTTGTGGAGCTATCCCTTTCATCACTGAAACCGTCTTCTGTTTGTGTGTGTTGTAAGATGTATGCCATCTCTTCTACTTTGTAAATTATTATTTGACGGTGGCCCTGATCTTTCTCCAAAATATACTACCAGGTTTTCCCTATTAATTGAAGCCCTGTTTGTTTTACCTCGATTGAGATTTTCAACTGCCCCGTTTTTGGGTAAACTGCAAACAAAAGACACTCAACTGGACTTTGTGATATCCTAGAGAATTAATTTGTTTATGGAAAGCACATTCATGGCAGATTTCTGTCGTCAAATTTTTATGATCATTGTCCATGGGCTTCTTTACCTTCATGGAAACTTGAAACCTCCAAGAAAAATCTTTATTAGAGAAGTTATGAACATTATTTTAAAAGTGAGCATGAAAGTCGTACTAAGGGTATTTTCATAAAAAATATTGGTTGTCTTCAGTATTGGCTTGTGGTTGTGGATAGTTCTGTTCTGCTTCTGTCTTTTTAAATATTTTTTTTCAATTTTGGGATCTATCGTGAAAAATATATTTTCTTTTCTTCTGCAGGTGTTTATTGTGGCTGTCCTGGCAATTTTCCCCCTAATACCCAAAAATCTTTCACAGAGGGCATACAGGCTATCTTTTATGGGCACAACTTGTTCTTCTTTATATTCTTTGTACTCGTTGTATGGAGTAAGTTCCCCATACTACTTTAACATCTTCATTTGCAATTCTATGAAAACTCTTGGTTTCTTCCAATCTTAAGAAGAGAAAAGAGAACATCTCCTTTGTGTTCATCTATTTCTCCGTATTATCTTTCTATTTTTTATCTTAATTTTTTTAACGTTTACAGAAGCCCAGGGCATGGAATTTGCAAGCTTTGCAAGCTTATTTACAGTCGATAATTGGAACAAAAGATTTCATTTACTTCACCTACTGTATCACCTTTGTGACTTCAAATATTTGTCTTAAATGTAAGCATAGCTTCACTGATCAACTTTTGTTTATCTATTGATCTCCTTGTGATATCATATCACCTTATTTGTCCATTGAAACGTGAGTTTGTTCATATGATGTTTTTTTATCATTTCTTACTCGTGCGGTGATTTTTAATATTTTGCTTTTATGTTTGATGCAGTTGCTTTAATTCCTATCCTATGTCGAGCACTTGAACATGTTGCAAAGTTTCTTAGGCGTAATTTTGCACGTTCGTCCTTATACAGGTAGCCAGTTGTCAATTTTTCGATTCAGTTTATTTCCACACATGCACACACACAGAATCCTTAAATCTCTACTTACATTTTAGACTGCATGTGTTTTTCATTTTATACCCTCCATCTTTGCTTTTATGGAAGGGGAAGGTGCCCAAAGTTTCTTCCTTGTGCCTAGATAGGGATATACTTCTTAGGAGAAAATTAAGCGCTGTACAAACAGAAAGAGAGAATAGATCTGATTAAAGTTCCTTTAATTTCAAAATTGGAAGGTGAATATTACTAACAAGAGATGCATTATGTGTTATTAAGGGAATTAATGGGTGTCTAAGAGTAGATGAATGTATATTACCTCTTATTTTTCTCGTGTGCTTAATATCTGCTTGTTCACTTCTTTTATCACTCAAGTTTATAACAATTTTTTCTCTATCCGAGTATCTTATGCTTCTTTTCTTTCTCTAATTTGTTGCAGGAAATATTTGGAAGACCCTTGCGTATGGGTGGAGTCAAATTCAACTACTCTCAGTATTCTGTCTTCGCAGGCTGAGATTGGACTTGGCTTCATTCTTATCATCTCCTTGCTCTCGTCAGTTTTTAGTTCCTTTTGGCTCTTGCCAACTTCTTCTAAATCCACAACAATAACACACGCACACACTTTTTAATGGCCATTTCTCTTCAATGATCTCCTCAAACTTGTGTTCTACAGGTGGCAACGCAACTTCTTACATACATTCATGTACTGGCAGGTGCGTTCTCGTGTAATCGTAACATAATAACATAATAGTATATGTCAGTACAACATAATAGATACTTGGGAACGCATACAATATTAGAAAACATAGAAGATCAGTTTACCATCTTAAATGTGTGTGTGGGTGAGGTGGGGAGATTTAACTTCAAAATAATTGAGCTTCTAACCCTGAAATGCTTGAGCTTCCATTAACAACCATGTTTCTATAATCATTAACCGAAGAGCAATTCTCTTGAATTTTTAACCAAATAAATGGTATGTTGTTTCTAATATGATCTCATTTTGATGTTATAACTCATGAATAGATTGGTGGAACATCTTTAGGGTGTTCTCTTGTTGAAACTCTATATTTTGTTTTCATAATCCGAGAAAAGAGTTGGTGACTCACTTTTTTTTTTTTTTGGACAATTTCAAAACAGTTGCTAAAGCTTATGTATCATGCTCCTGTCACTTCTGGATATCACCGTAGTGCCTGGACCAATATTGGGAGGGTTGTTTCGCCGCTGATCTACCGTTATGCCCCATTCCTCAATACTCCTCTTTCGATGGCGCAAAGATGGTGGTTCAGATAGAATAGATGAAGAAGATGCAACTCTGATGTATGAAATTTTTTTAGACTAATCCCAGTAGTGACTCTTTCCTTCCACTTTTTCAAGCTAAAAATTGGTGTCACAATGTCTTGAAAAGCATTCCTATAACATGGAATGGATGACATTCTCACTTAGGTCTGTGGATCAAGTTTGGCTTCCAAATGCAACTTCTTATAAATTTAAGACTCACATACATTAGGCGAGATTGTCATGTTTGGAATGTGGATTTTTTATCCTGCCTGAGGTTTCTCATTGTGATGGAAGGTTCTTCATTATTTCTTTCTTTTTGCTTTCATTTTGTAGACTTCATGTCAAACATCTTAATAACTATTGAGATTCTAAAATTAGATCTTTGGACACAATTAAAAACCAGGTCTATATCTCTGGTAATTGTACTATTATTGAGTTTATTTATATTTCTTGTTAGTATGAACATAACTTAATTGACAAAAGAATTGACAAAAGAATAACGAAT

Coding sequence (CDS)

ATGGGGGAAGAACAAGATGGTTCGCAGAGGCTTAAGAGGACAGCGGCAGCATCATACGACTACGAGAACGATCCCAGATGGGCTGATTATTGGTCCAACATTTTGATTCCTCCTAACATGGCGTCTCGCTCTGATGTTGTTGATCATTACAAGCGGAAGTTTTACCAGAGATACATCGATCCTGAACTTGTAGTAGAAGCCATGTCTTCAAGTAGTTCAACTCAGTCATCTAGACCTTCAGCAACATCTTCCGCAGCAACCTCTCCTACTAATGATCGAAGTCGACCACGAAGTTCAGGATCGACGTCTAGGACTTCAGGTACATCTGCTAGTGCAGATGCTAATCCAACACCCTTGCGCTGGGATCGGCAAACAATTCAGTTTTCTGTCAATGCATGGGTGTTTATTGTGGCTGTCCTGGCAATTTTCCCCCTAATACCCAAAAATCTTTCACAGAGGGCATACAGGCTATCTTTTATGGGCACAACTTGTTCTTCTTTATATTCTTTGTACTCGTTGTATGGAAAGCCCAGGGCATGGAATTTGCAAGCTTTGCAAGCTTATTTACAGTCGATAATTGGAACAAAAGATTTCATTTACTTCACCTACTGTATCACCTTTGTGACTTCAAATATTTGTCTTAAATTTGCTTTAATTCCTATCCTATGTCGAGCACTTGAACATGTTGCAAAGTTTCTTAGGCGTAATTTTGCACGTTCGTCCTTATACAGGAAATATTTGGAAGACCCTTGCGTATGGGTGGAGTCAAATTCAACTACTCTCAGTATTCTGTCTTCGCAGGCTGAGATTGGACTTGGCTTCATTCTTATCATCTCCTTGCTCTCGTGGCAACGCAACTTCTTACATACATTCATGTACTGGCAGTTGCTAAAGCTTATGTATCATGCTCCTGTCACTTCTGGATATCACCGTAGTGCCTGGACCAATATTGGGAGGGTTGTTTCGCCGCTGATCTACCGTTATGCCCCATTCCTCAATACTCCTCTTTCGATGGCGCAAAGATGGTGGTTCAGATAG

Protein sequence

MGEEQDGSQRLKRTAAASYDYENDPRWADYWSNILIPPNMASRSDVVDHYKRKFYQRYIDPELVVEAMSSSSSTQSSRPSATSSAATSPTNDRSRPRSSGSTSRTSGTSASADANPTPLRWDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSQRAYRLSFMGTTCSSLYSLYSLYGKPRAWNLQALQAYLQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRALEHVAKFLRRNFARSSLYRKYLEDPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQLLKLMYHAPVTSGYHRSAWTNIGRVVSPLIYRYAPFLNTPLSMAQRWWFR

Homology

[Close]

BLAST of Cucsat.G8508 vs. NCBI nr
Match: XP_004141492.1 (uncharacterized protein LOC101211899 isoform X2 [Cucumis sativus] >KGN52563.1 hypothetical protein Csa_007896 [Cucumis sativus])

HSP 1 Score: 570 bits (1469), Expect = 9.99e-204
Identity = 295/296 (99.66%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MGEEQDGSQRLKRTAAASYDYENDPRWADYWSNILIPPNMASRSDVVDHYKRKFYQRYID 60
           MGEEQDGSQRLKRTAAASYDYENDPRWADYWSNILIPPNMASRSDVVDHYKRKFYQRYID
Sbjct: 1   MGEEQDGSQRLKRTAAASYDYENDPRWADYWSNILIPPNMASRSDVVDHYKRKFYQRYID 60

Query: 61  PELVVEAMSSSSSTQSSRPSATSSAATSPTNDRSRPRSSGSTSRTSGTSASADANPTPLR 120
           PELVVEAMSSSSSTQSSRPSATSSAATSPTNDRSRPRSSGSTSRTSGTSASADANPTPLR
Sbjct: 61  PELVVEAMSSSSSTQSSRPSATSSAATSPTNDRSRPRSSGSTSRTSGTSASADANPTPLR 120

Query: 121 WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSQRAYRLSFMGTTCSSLYSLYSLYGKPRAW 180
           WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSQRAYRLSFMGTTCSSLYSLYSLYGKPRAW
Sbjct: 121 WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSQRAYRLSFMGTTCSSLYSLYSLYGKPRAW 180

Query: 181 NLQALQAYLQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRALEHVAKFLRRNFARS 240
           NLQALQAYLQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRALEHVAKFLRRNFARS
Sbjct: 181 NLQALQAYLQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRALEHVAKFLRRNFARS 240

Query: 241 SLYRKYLEDPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQV 296
           SLYRKYLEDPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQ+
Sbjct: 241 SLYRKYLEDPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQL 296

[Close]

BLAST of Cucsat.G8508 vs. NCBI nr
Match: XP_011656030.1 (uncharacterized protein LOC101211899 isoform X1 [Cucumis sativus])

HSP 1 Score: 565 bits (1457), Expect = 6.98e-202
Identity = 295/297 (99.33%), Postives = 296/297 (99.66%), Query Frame = 0


Query: 1   MGEEQDGSQRLKRTAAASYDYENDPRWADYWSNILIPPNMASRSDVVDHYKRKFYQRYID 60
           MGEEQDGSQRLKRTAAASYDYENDPRWADYWSNILIPPNMASRSDVVDHYKRKFYQRYID
Sbjct: 1   MGEEQDGSQRLKRTAAASYDYENDPRWADYWSNILIPPNMASRSDVVDHYKRKFYQRYID 60

Query: 61  PELVVEAMSSSSSTQSSRPSATSSAATSPTNDRSRPRSS-GSTSRTSGTSASADANPTPL 120
           PELVVEAMSSSSSTQSSRPSATSSAATSPTNDRSRPRSS GSTSRTSGTSASADANPTPL
Sbjct: 61  PELVVEAMSSSSSTQSSRPSATSSAATSPTNDRSRPRSSAGSTSRTSGTSASADANPTPL 120

Query: 121 RWDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSQRAYRLSFMGTTCSSLYSLYSLYGKPRA 180
           RWDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSQRAYRLSFMGTTCSSLYSLYSLYGKPRA
Sbjct: 121 RWDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSQRAYRLSFMGTTCSSLYSLYSLYGKPRA 180

Query: 181 WNLQALQAYLQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRALEHVAKFLRRNFAR 240
           WNLQALQAYLQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRALEHVAKFLRRNFAR
Sbjct: 181 WNLQALQAYLQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRALEHVAKFLRRNFAR 240

Query: 241 SSLYRKYLEDPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQV 296
           SSLYRKYLEDPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQ+
Sbjct: 241 SSLYRKYLEDPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQL 297

[Close]

BLAST of Cucsat.G8508 vs. NCBI nr
Match: XP_008459425.1 (PREDICTED: transmembrane protein 33 homolog isoform X2 [Cucumis melo] >ADN34282.1 hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 551 bits (1421), Expect = 2.05e-196
Identity = 285/296 (96.28%), Postives = 288/296 (97.30%), Query Frame = 0


Query: 1   MGEEQDGSQRLKRTAAASYDYENDPRWADYWSNILIPPNMASRSDVVDHYKRKFYQRYID 60
           MGEEQD SQRLKR AAASYDYENDPRWADYWSNILIPPNMASR DVVDHYKRKFYQRYID
Sbjct: 1   MGEEQDDSQRLKRAAAASYDYENDPRWADYWSNILIPPNMASRPDVVDHYKRKFYQRYID 60

Query: 61  PELVVEAMSSSSSTQSSRPSATSSAATSPTNDRSRPRSSGSTSRTSGTSASADANPTPLR 120
           PELVVEAMSSSSSTQSSRPSATSSAA  PTNDRSRPRSSGSTSRTSGTSAS DANPTPLR
Sbjct: 61  PELVVEAMSSSSSTQSSRPSATSSAAPPPTNDRSRPRSSGSTSRTSGTSASGDANPTPLR 120

Query: 121 WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSQRAYRLSFMGTTCSSLYSLYSLYGKPRAW 180
           WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLS RAYRLSFMGTTCSSLYSLYSLYGKPRAW
Sbjct: 121 WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSHRAYRLSFMGTTCSSLYSLYSLYGKPRAW 180

Query: 181 NLQALQAYLQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRALEHVAKFLRRNFARS 240
           NLQALQAY QSIIGTKDFIYFTYCITFVTSNICLKFALIPILCR+LEHVAKFLRRNFARS
Sbjct: 181 NLQALQAYFQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRSLEHVAKFLRRNFARS 240

Query: 241 SLYRKYLEDPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQV 296
           SLYRKYLE+PCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQ+
Sbjct: 241 SLYRKYLEEPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQL 296

[Close]

BLAST of Cucsat.G8508 vs. NCBI nr
Match: TYK00578.1 (transmembrane protein 33-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 550 bits (1417), Expect = 8.34e-196
Identity = 284/296 (95.95%), Postives = 288/296 (97.30%), Query Frame = 0


Query: 1   MGEEQDGSQRLKRTAAASYDYENDPRWADYWSNILIPPNMASRSDVVDHYKRKFYQRYID 60
           MGEEQD SQRLKR AAASYDYENDPRWADYWSNILIPPNMASR DVVDHYKRKFYQRYID
Sbjct: 1   MGEEQDDSQRLKRAAAASYDYENDPRWADYWSNILIPPNMASRPDVVDHYKRKFYQRYID 60

Query: 61  PELVVEAMSSSSSTQSSRPSATSSAATSPTNDRSRPRSSGSTSRTSGTSASADANPTPLR 120
           PELVVEAMSSSSS+QSSRPSATSSAA  PTNDRSRPRSSGSTSRTSGTSAS DANPTPLR
Sbjct: 61  PELVVEAMSSSSSSQSSRPSATSSAAPPPTNDRSRPRSSGSTSRTSGTSASGDANPTPLR 120

Query: 121 WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSQRAYRLSFMGTTCSSLYSLYSLYGKPRAW 180
           WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLS RAYRLSFMGTTCSSLYSLYSLYGKPRAW
Sbjct: 121 WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSHRAYRLSFMGTTCSSLYSLYSLYGKPRAW 180

Query: 181 NLQALQAYLQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRALEHVAKFLRRNFARS 240
           NLQALQAY QSIIGTKDFIYFTYCITFVTSNICLKFALIPILCR+LEHVAKFLRRNFARS
Sbjct: 181 NLQALQAYFQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRSLEHVAKFLRRNFARS 240

Query: 241 SLYRKYLEDPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQV 296
           SLYRKYLE+PCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQ+
Sbjct: 241 SLYRKYLEEPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQL 296

[Close]

BLAST of Cucsat.G8508 vs. NCBI nr
Match: XP_008459424.1 (PREDICTED: transmembrane protein 33 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 547 bits (1409), Expect = 1.43e-194
Identity = 285/297 (95.96%), Postives = 288/297 (96.97%), Query Frame = 0


Query: 1   MGEEQDGSQRLKRTAAASYDYENDPRWADYWSNILIPPNMASRSDVVDHYKRKFYQRYID 60
           MGEEQD SQRLKR AAASYDYENDPRWADYWSNILIPPNMASR DVVDHYKRKFYQRYID
Sbjct: 1   MGEEQDDSQRLKRAAAASYDYENDPRWADYWSNILIPPNMASRPDVVDHYKRKFYQRYID 60

Query: 61  PELVVEAMSSSSSTQSSRPSATSSAATSPTNDRSRPRSS-GSTSRTSGTSASADANPTPL 120
           PELVVEAMSSSSSTQSSRPSATSSAA  PTNDRSRPRSS GSTSRTSGTSAS DANPTPL
Sbjct: 61  PELVVEAMSSSSSTQSSRPSATSSAAPPPTNDRSRPRSSAGSTSRTSGTSASGDANPTPL 120

Query: 121 RWDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSQRAYRLSFMGTTCSSLYSLYSLYGKPRA 180
           RWDRQTIQFSVNAWVFIVAVLAIFPLIPKNLS RAYRLSFMGTTCSSLYSLYSLYGKPRA
Sbjct: 121 RWDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSHRAYRLSFMGTTCSSLYSLYSLYGKPRA 180

Query: 181 WNLQALQAYLQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRALEHVAKFLRRNFAR 240
           WNLQALQAY QSIIGTKDFIYFTYCITFVTSNICLKFALIPILCR+LEHVAKFLRRNFAR
Sbjct: 181 WNLQALQAYFQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRSLEHVAKFLRRNFAR 240

Query: 241 SSLYRKYLEDPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQV 296
           SSLYRKYLE+PCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQ+
Sbjct: 241 SSLYRKYLEEPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQL 297

[Close]

BLAST of Cucsat.G8508 vs. ExPASy TrEMBL
Match: A0A0A0KSM7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643910 PE=3 SV=1)

HSP 1 Score: 570 bits (1469), Expect = 4.83e-204
Identity = 295/296 (99.66%), Postives = 296/296 (100.00%), Query Frame = 0


Query: 1   MGEEQDGSQRLKRTAAASYDYENDPRWADYWSNILIPPNMASRSDVVDHYKRKFYQRYID 60
           MGEEQDGSQRLKRTAAASYDYENDPRWADYWSNILIPPNMASRSDVVDHYKRKFYQRYID
Sbjct: 1   MGEEQDGSQRLKRTAAASYDYENDPRWADYWSNILIPPNMASRSDVVDHYKRKFYQRYID 60

Query: 61  PELVVEAMSSSSSTQSSRPSATSSAATSPTNDRSRPRSSGSTSRTSGTSASADANPTPLR 120
           PELVVEAMSSSSSTQSSRPSATSSAATSPTNDRSRPRSSGSTSRTSGTSASADANPTPLR
Sbjct: 61  PELVVEAMSSSSSTQSSRPSATSSAATSPTNDRSRPRSSGSTSRTSGTSASADANPTPLR 120

Query: 121 WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSQRAYRLSFMGTTCSSLYSLYSLYGKPRAW 180
           WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSQRAYRLSFMGTTCSSLYSLYSLYGKPRAW
Sbjct: 121 WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSQRAYRLSFMGTTCSSLYSLYSLYGKPRAW 180

Query: 181 NLQALQAYLQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRALEHVAKFLRRNFARS 240
           NLQALQAYLQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRALEHVAKFLRRNFARS
Sbjct: 181 NLQALQAYLQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRALEHVAKFLRRNFARS 240

Query: 241 SLYRKYLEDPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQV 296
           SLYRKYLEDPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQ+
Sbjct: 241 SLYRKYLEDPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQL 296

[Close]

BLAST of Cucsat.G8508 vs. ExPASy TrEMBL
Match: E5GCT3 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 551 bits (1421), Expect = 9.93e-197
Identity = 285/296 (96.28%), Postives = 288/296 (97.30%), Query Frame = 0


Query: 1   MGEEQDGSQRLKRTAAASYDYENDPRWADYWSNILIPPNMASRSDVVDHYKRKFYQRYID 60
           MGEEQD SQRLKR AAASYDYENDPRWADYWSNILIPPNMASR DVVDHYKRKFYQRYID
Sbjct: 1   MGEEQDDSQRLKRAAAASYDYENDPRWADYWSNILIPPNMASRPDVVDHYKRKFYQRYID 60

Query: 61  PELVVEAMSSSSSTQSSRPSATSSAATSPTNDRSRPRSSGSTSRTSGTSASADANPTPLR 120
           PELVVEAMSSSSSTQSSRPSATSSAA  PTNDRSRPRSSGSTSRTSGTSAS DANPTPLR
Sbjct: 61  PELVVEAMSSSSSTQSSRPSATSSAAPPPTNDRSRPRSSGSTSRTSGTSASGDANPTPLR 120

Query: 121 WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSQRAYRLSFMGTTCSSLYSLYSLYGKPRAW 180
           WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLS RAYRLSFMGTTCSSLYSLYSLYGKPRAW
Sbjct: 121 WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSHRAYRLSFMGTTCSSLYSLYSLYGKPRAW 180

Query: 181 NLQALQAYLQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRALEHVAKFLRRNFARS 240
           NLQALQAY QSIIGTKDFIYFTYCITFVTSNICLKFALIPILCR+LEHVAKFLRRNFARS
Sbjct: 181 NLQALQAYFQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRSLEHVAKFLRRNFARS 240

Query: 241 SLYRKYLEDPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQV 296
           SLYRKYLE+PCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQ+
Sbjct: 241 SLYRKYLEEPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQL 296

[Close]

BLAST of Cucsat.G8508 vs. ExPASy TrEMBL
Match: A0A1S3CA90 (transmembrane protein 33 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498565 PE=3 SV=1)

HSP 1 Score: 551 bits (1421), Expect = 9.93e-197
Identity = 285/296 (96.28%), Postives = 288/296 (97.30%), Query Frame = 0


Query: 1   MGEEQDGSQRLKRTAAASYDYENDPRWADYWSNILIPPNMASRSDVVDHYKRKFYQRYID 60
           MGEEQD SQRLKR AAASYDYENDPRWADYWSNILIPPNMASR DVVDHYKRKFYQRYID
Sbjct: 1   MGEEQDDSQRLKRAAAASYDYENDPRWADYWSNILIPPNMASRPDVVDHYKRKFYQRYID 60

Query: 61  PELVVEAMSSSSSTQSSRPSATSSAATSPTNDRSRPRSSGSTSRTSGTSASADANPTPLR 120
           PELVVEAMSSSSSTQSSRPSATSSAA  PTNDRSRPRSSGSTSRTSGTSAS DANPTPLR
Sbjct: 61  PELVVEAMSSSSSTQSSRPSATSSAAPPPTNDRSRPRSSGSTSRTSGTSASGDANPTPLR 120

Query: 121 WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSQRAYRLSFMGTTCSSLYSLYSLYGKPRAW 180
           WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLS RAYRLSFMGTTCSSLYSLYSLYGKPRAW
Sbjct: 121 WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSHRAYRLSFMGTTCSSLYSLYSLYGKPRAW 180

Query: 181 NLQALQAYLQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRALEHVAKFLRRNFARS 240
           NLQALQAY QSIIGTKDFIYFTYCITFVTSNICLKFALIPILCR+LEHVAKFLRRNFARS
Sbjct: 181 NLQALQAYFQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRSLEHVAKFLRRNFARS 240

Query: 241 SLYRKYLEDPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQV 296
           SLYRKYLE+PCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQ+
Sbjct: 241 SLYRKYLEEPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQL 296

[Close]

BLAST of Cucsat.G8508 vs. ExPASy TrEMBL
Match: A0A5D3BN97 (Transmembrane protein 33-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001940 PE=3 SV=1)

HSP 1 Score: 550 bits (1417), Expect = 4.04e-196
Identity = 284/296 (95.95%), Postives = 288/296 (97.30%), Query Frame = 0


Query: 1   MGEEQDGSQRLKRTAAASYDYENDPRWADYWSNILIPPNMASRSDVVDHYKRKFYQRYID 60
           MGEEQD SQRLKR AAASYDYENDPRWADYWSNILIPPNMASR DVVDHYKRKFYQRYID
Sbjct: 1   MGEEQDDSQRLKRAAAASYDYENDPRWADYWSNILIPPNMASRPDVVDHYKRKFYQRYID 60

Query: 61  PELVVEAMSSSSSTQSSRPSATSSAATSPTNDRSRPRSSGSTSRTSGTSASADANPTPLR 120
           PELVVEAMSSSSS+QSSRPSATSSAA  PTNDRSRPRSSGSTSRTSGTSAS DANPTPLR
Sbjct: 61  PELVVEAMSSSSSSQSSRPSATSSAAPPPTNDRSRPRSSGSTSRTSGTSASGDANPTPLR 120

Query: 121 WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSQRAYRLSFMGTTCSSLYSLYSLYGKPRAW 180
           WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLS RAYRLSFMGTTCSSLYSLYSLYGKPRAW
Sbjct: 121 WDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSHRAYRLSFMGTTCSSLYSLYSLYGKPRAW 180

Query: 181 NLQALQAYLQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRALEHVAKFLRRNFARS 240
           NLQALQAY QSIIGTKDFIYFTYCITFVTSNICLKFALIPILCR+LEHVAKFLRRNFARS
Sbjct: 181 NLQALQAYFQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRSLEHVAKFLRRNFARS 240

Query: 241 SLYRKYLEDPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQV 296
           SLYRKYLE+PCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQ+
Sbjct: 241 SLYRKYLEEPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQL 296

[Close]

BLAST of Cucsat.G8508 vs. ExPASy TrEMBL
Match: A0A1S3C9N1 (transmembrane protein 33 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498565 PE=3 SV=1)

HSP 1 Score: 547 bits (1409), Expect = 6.93e-195
Identity = 285/297 (95.96%), Postives = 288/297 (96.97%), Query Frame = 0


Query: 1   MGEEQDGSQRLKRTAAASYDYENDPRWADYWSNILIPPNMASRSDVVDHYKRKFYQRYID 60
           MGEEQD SQRLKR AAASYDYENDPRWADYWSNILIPPNMASR DVVDHYKRKFYQRYID
Sbjct: 1   MGEEQDDSQRLKRAAAASYDYENDPRWADYWSNILIPPNMASRPDVVDHYKRKFYQRYID 60

Query: 61  PELVVEAMSSSSSTQSSRPSATSSAATSPTNDRSRPRSS-GSTSRTSGTSASADANPTPL 120
           PELVVEAMSSSSSTQSSRPSATSSAA  PTNDRSRPRSS GSTSRTSGTSAS DANPTPL
Sbjct: 61  PELVVEAMSSSSSTQSSRPSATSSAAPPPTNDRSRPRSSAGSTSRTSGTSASGDANPTPL 120

Query: 121 RWDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSQRAYRLSFMGTTCSSLYSLYSLYGKPRA 180
           RWDRQTIQFSVNAWVFIVAVLAIFPLIPKNLS RAYRLSFMGTTCSSLYSLYSLYGKPRA
Sbjct: 121 RWDRQTIQFSVNAWVFIVAVLAIFPLIPKNLSHRAYRLSFMGTTCSSLYSLYSLYGKPRA 180

Query: 181 WNLQALQAYLQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRALEHVAKFLRRNFAR 240
           WNLQALQAY QSIIGTKDFIYFTYCITFVTSNICLKFALIPILCR+LEHVAKFLRRNFAR
Sbjct: 181 WNLQALQAYFQSIIGTKDFIYFTYCITFVTSNICLKFALIPILCRSLEHVAKFLRRNFAR 240

Query: 241 SSLYRKYLEDPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQV 296
           SSLYRKYLE+PCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQ+
Sbjct: 241 SSLYRKYLEEPCVWVESNSTTLSILSSQAEIGLGFILIISLLSWQRNFLHTFMYWQL 297

The following BLAST results are available for this feature:

BLAST of Cucsat.G8508 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G8508 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141492.1	9.99e-204	99.66	uncharacterized protein LOC101211899 isoform X2 [Cucumis sativus] >KGN52563.1 hy...	[more]
XP_011656030.1	6.98e-202	99.33	uncharacterized protein LOC101211899 isoform X1 [Cucumis sativus]	[more]
XP_008459425.1	2.05e-196	96.28	PREDICTED: transmembrane protein 33 homolog isoform X2 [Cucumis melo] >ADN34282....	[more]
TYK00578.1	8.34e-196	95.95	transmembrane protein 33-like protein isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008459424.1	1.43e-194	95.96	PREDICTED: transmembrane protein 33 homolog isoform X1 [Cucumis melo]	[more]

BLAST of Cucsat.G8508 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSM7	4.83e-204	99.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643910 PE=3 SV=1	[more]
E5GCT3	9.93e-197	96.28	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1	[more]
A0A1S3CA90	9.93e-197	96.28	transmembrane protein 33 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498...	[more]
A0A5D3BN97	4.04e-196	95.95	Transmembrane protein 33-like protein isoform X1 OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3C9N1	6.93e-195	95.96	transmembrane protein 33 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005344	TMEM33/Pom33 family	PFAM	PF03661	TMEM33_Pom33	coord: 124..313 e-value: 6.8E-17 score: 61.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..116
None	No IPR available	PANTHER	PTHR30603	RNA POLYMERASE SIGMA FACTOR RPO	coord: 7..345
None	No IPR available	PANTHER	PTHR30603:SF18	OS01G0604700 PROTEIN	coord: 7..345

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G8508.T1	Cucsat.G8508.T1	mRNA
Cucsat.G8508.T4	Cucsat.G8508.T4	mRNA
Cucsat.G8508.T2	Cucsat.G8508.T2	mRNA
Cucsat.G8508.T3	Cucsat.G8508.T3	mRNA
Cucsat.G8508.T6	Cucsat.G8508.T6	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane