Cucsat.G8497 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G8497
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	60S ribosomal protein L10
Location	ctg1557: 3170742 .. 3172588 (-)
RNA-Seq Expression	Cucsat.G8497
Synteny	Cucsat.G8497

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCGGCCCTTCGTCCTCTTATCGTATATATATGATAAGAATTAGGGTTTCTGCAGCCGACGAGGTCAAGTTGAAGAAGACGGGGACGACGTAAACGAGCGCACGCCATGGGTAGAAGTACGTAAATCTTTTCGATTCTTTATCTGATACATTCTTCCATGTTTCTAACTGAAGAATAATCTACTTGTATCTTGCAATTTTTGTGTCTTTTCTCACCTTCGATGTTAGATACAAATTGTGTGTCGTTTCTCTAGATGCAAGCTGAAATTAAGCGACGAGCTTCGTTTTTTATTGACGGAAAATTCAATTGTTGGAAATGGATGGGTTTCCGCTTGTTCCAGTTGGAAAATATTGTGTTCCTGTTATTTATGAGATTTTTCTATAGTATATTGGTATTTGGTGCATGTGTCGATGATTTGATAAGTATTAAGTTGTAATCCATGCGTTATCTTGTGTGAAATTGGTTAATTATTGTGCAGTGTTAGAATCTATGTAAGTCAGGCTCTAAAGAAATAAACCCTGCAACTTCCTTGTTTTCACGTTCTACTATTAACGGATTGGGATTTTTTCTCTCTTCATATGAAGGAATATTGTTACTGTTTTGCTTTAATTGTTCTTCAGTTGCGAGCGCTTATGATTTAATAATAGGATGCATATGCTCGCTGGAGAATGTTTGGGGTTGATAGTCAGAATTTTGTAAGTTATGAAAATAGATGTGTGGTTAGCAAGGTTTTTATAAGTGGTAAATCCATAAATTTAGTTGACGGGCTTTATAATTAAGTAAAAATAAAAATGTGAAGTGTGGGGCTTGAACCTGGGTCGACAAAGGCTGAGTGACAGTTTTACAACTGAGCTAGCCATTGTTATTAGTATTATTTCAGTTTTTTATATATATTATATAAAGAGCATAGAACAAAATTGATAGGGCTTGAGCCCTTGGGTCTATACTAAATCCATTGATGGTTTTAATCATGTTGTTTTGAGTTGATAATCTGTGCAGACCTCTATATTTATTCTGATTGTCTTGTATGGGTAGCCACAGTTCTGGCTTAACCTTTGTCGGTTTATGTTGTTTTGATTTGATCTTGATAATTCTACGTTGGTTCTACTTTACCTGCAAGGCTGTTGCTTGTTATTCATTTCCCGTACATTCTTTATTGTAGGACCTGCAAGATGTTACAGGCAAATTAAAAACAAGCCTTATCCAAAATCCAGATTTTGTCGTGGTGTCCCCGATCCCAAGATCAGGATCTATGATGTTGGAATGAAAAAGAAGGGTGTGGATGAGTTTCCTTTTTGTGTTCACCTAGTGAGTTGGGAGAAAGAAAATGTGTCCAGTGAAGCTTTGGAAGCTGCTAGGATTGCCTGCAACAAGTATATGGCAAAGTTTGCTGGGAAGGACGCATTCCATTTGAGAGTCAGGGTGCACCCCTTCCATGTTCTTCGAATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACCGGTATGAGAGGTGCTTTTGGAAAACCACAAGGAACCTGTGCAAGAGTGGCTATCGGTCAGGTTCTTCTTTCAGTTCGGTGCAAGGATAGTAACAGCCAACATGCACAGGAGGCCCTCCGTCGTGCTAAGTTCAAATTCCCTGGTCGCCAGAAGATCATTGTCAGCAGGAAGTGGTATGCCTCAAAAGATTTTTCAGTTTTTTTCTTCTTCAGCTAAATGCCCTTGTGGGTCATTCATGTTGTTTTAGTGCCTCAATTTATTTTACAGTAATTAAATCTTAAAATGTTACCAATCCTATGATTAAATGATTATTGCTTCAAATTTCTTTTTCAGGGGTTTTACTAAATTCAGTCGGGCTGATTATCTAGCTTACAAGGCAGAAAACAAAATTCTTCCTGATGGTGTTAATGCCAAGGTAGGCTATATCGCATTCAGTCATATGTCTTGGAATTTCCTTTTTCTTTTTTCATTTTACAAGCACAAGAATGGATGTTGGGTTAGATATTGGGCTACGAGATTTTACTTTTCCTTTTATATCACATGAATTTAAACTCGTTAAAGACCATGTGAAGAGCATTGACTGTCCTTGGATGAATTTGGTTTGAATGGTGGGTTGCTTAGGGTCATGTTCAAAATTTGTTGGTTCTTCATTACTGATAAGAACATAATTATTCGTACTTTCGGTATGTAAATATATCATGAGAATGGTCGAGGTGCTCATAATCTTTTATATCTCAGTGGAAGAGCTGTTCTTAAGGCACGATTTGATGGTTAATTTGCTCTATTTTATATTTACCTTCCTATATTTTCAACTAATGAGTTGGTAACTGAACTTTTCAGCTTCTTGGATGCCATGGACCTTTAGCAAATCGTCAACCTGGAAGAGCATTTCTATCTCAAGCCTAAGATCAGCTAGTTCTTTCGTTTTTGTCAGTTGTTTTTTTCTTCTTTTTGTCGATTTTGACACTTGAACAAGTCTTTATTATCATATTTTGTTTGTATTAAACCTCAAACTAATTCTGGCAGTTTTATCGATCTATTATGATGAGGATATATCAAGAATCTTGGTTTTTAAGGCTTCCTATTTTCGAACCATTAGTTTATTACATCAGTGTTTCATTTCTAATGTCAGTACCAATATAGGCCATTCTTTTGCATTAATGTTACTTTCATCGATCATATCCAAAATGATTTCAATATACTCCACTGCTGCTATCTGAAAACTATTCCCTTAACCTTAAAAATAGGAGATGTGAATCAACCTAACTATTGTAACCGGAGATGTGAATCAATTCTAACTATTGTAATTTATTAATGGAGACTAATAAAATTAGTGGTATGTACTTAACATTTTGATCAACTAACTTGAGGTGTGACGACTTTCTTGATCAATTAACTTGAGGCAATTGAATATAGGAAGTATAAGGAATTGAGTCGACTCGCGAATTAGAAGAAAGGACACGTAGCCGGGGCA

Coding sequence (CDS)

ATGGGTAGAAGACCTGCAAGATGTTACAGGCAAATTAAAAACAAGCCTTATCCAAAATCCAGATTTTGTCGTGGTGTCCCCGATCCCAAGATCAGGATCTATGATGTTGGAATGAAAAAGAAGGGTGTGGATGAGTTTCCTTTTTGTGTTCACCTAGTGAGTTGGGAGAAAGAAAATGTGTCCAGTGAAGCTTTGGAAGCTGCTAGGATTGCCTGCAACAAGTATATGGCAAAGTTTGCTGGGAAGGACGCATTCCATTTGAGAGTCAGGGTGCACCCCTTCCATGTTCTTCGAATTAACAAGATGCTTTCATGTGCTGGGGCTGATAGGCTCCAGACCGGTATGAGAGGTGCTTTTGGAAAACCACAAGGAACCTGTGCAAGAGTGGCTATCGGTCAGGTTCTTCTTTCAGTTCGGTGCAAGGATAGTAACAGCCAACATGCACAGGAGGCCCTCCGTCGTGCTAAGTTCAAATTCCCTGGTCGCCAGAAGATCATTGTCAGCAGGAAGTGGGGTTTTACTAAATTCAGTCGGGCTGATTATCTAGCTTACAAGGCAGAAAACAAAATTCTTCCTGATGGTGTTAATGCCAAGCTTCTTGGATGCCATGGACCTTTAGCAAATCGTCAACCTGGAAGAGCATTTCTATCTCAAGCCTAA

Protein sequence

MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENVSSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWGFTKFSRADYLAYKAENKILPDGVNAKLLGCHGPLANRQPGRAFLSQA

Homology

[Close]

BLAST of Cucsat.G8497 vs. ExPASy Swiss-Prot
Match: Q9M5M7 (60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 7.4e-95
Identity = 167/175 (95.43%), Postives = 170/175 (97.14%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYASK 176
           KPQG CARVAIGQVLLSVRCKD+NS +AQEALRRAKFKFPGRQKIIVSRKW  +K
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDNNSHNAQEALRRAKFKFPGRQKIIVSRKWGFTK 175

[Close]

BLAST of Cucsat.G8497 vs. ExPASy Swiss-Prot
Match: Q9SPB3 (60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 2.2e-94
Identity = 165/175 (94.29%), Postives = 169/175 (96.57%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYASK 176
           KPQGTCARV+IGQVLLSVRCKD NS HAQEALRRAKFKFP RQKIIVSRKW  +K
Sbjct: 121 KPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPARQKIIVSRKWGFTK 175

[Close]

BLAST of Cucsat.G8497 vs. ExPASy Swiss-Prot
Match: P93847 (60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 2.8e-94
Identity = 166/175 (94.86%), Postives = 168/175 (96.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMK+KGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKRKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKSAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYASK 176
           KPQG CARVAIGQVLLSVRCKD NS HAQEALRRAKFKFPGRQKIIVSRKW  +K
Sbjct: 121 KPQGVCARVAIGQVLLSVRCKDGNSNHAQEALRRAKFKFPGRQKIIVSRKWGFTK 175

[Close]

BLAST of Cucsat.G8497 vs. ExPASy Swiss-Prot
Match: A2ZCQ7 (60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica OX=39946 GN=SC34 PE=2 SV=2)

HSP 1 Score: 339.3 bits (869), Expect = 2.6e-92
Identity = 162/175 (92.57%), Postives = 169/175 (96.57%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYASK 176
           KPQGTCARV IGQVLLSVRCK+SN++HA+EALRRAKFKFPGRQKII SRKW  +K
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTK 175

[Close]

BLAST of Cucsat.G8497 vs. ExPASy Swiss-Prot
Match: Q0ITS8 (60S ribosomal protein L10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=SC34 PE=2 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 2.6e-92
Identity = 162/175 (92.57%), Postives = 169/175 (96.57%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFP+CVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPYCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM K AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKNAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYASK 176
           KPQGTCARV IGQVLLSVRCK+SN++HA+EALRRAKFKFPGRQKII SRKW  +K
Sbjct: 121 KPQGTCARVDIGQVLLSVRCKESNAKHAEEALRRAKFKFPGRQKIIHSRKWGFTK 175

[Close]

BLAST of Cucsat.G8497 vs. NCBI nr
Match: ESR49203.1 (hypothetical protein CICLE_v10032703mg [Citrus clementina] >GAY53914.1 hypothetical protein CUMW_152610 [Citrus unshiu])

HSP 1 Score: 356 bits (913), Expect = 2.65e-123
Identity = 172/180 (95.56%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYASKDFSVF 180
           KPQGTCARVAIGQVLLSVRCKDSNS HAQEALRRAKFKFPGRQKIIVSRKWYA    + F
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWYAFLSMTAF 180

[Close]

BLAST of Cucsat.G8497 vs. NCBI nr
Match: RZB69720.1 (60S ribosomal protein L10 isoform B [Glycine soja])

HSP 1 Score: 355 bits (910), Expect = 3.26e-123
Identity = 171/172 (99.42%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWY 172
           KPQGTCARVAIGQVLLSVRCKDSNS HAQEALRRAKFKFPGRQKIIVSRKWY
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWY 172

[Close]

BLAST of Cucsat.G8497 vs. NCBI nr
Match: KDO54934.1 (hypothetical protein CISIN_1g027696mg [Citrus sinensis])

HSP 1 Score: 354 bits (908), Expect = 5.92e-123
Identity = 171/172 (99.42%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWY 172
           KPQGTCARVAIGQVLLSVRCKDSNS HAQEALRRAKFKFPGRQKIIVSRKWY
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSLHAQEALRRAKFKFPGRQKIIVSRKWY 172

[Close]

BLAST of Cucsat.G8497 vs. NCBI nr
Match: KJB83920.1 (hypothetical protein B456_013G271500 [Gossypium raimondii])

HSP 1 Score: 354 bits (908), Expect = 6.35e-123
Identity = 170/173 (98.27%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYA 173
           KPQGTCARVAIGQVLLSVRCKDSNS HAQEALRRAKFKFPGRQKIIVSRKWYA
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWYA 173

[Close]

BLAST of Cucsat.G8497 vs. NCBI nr
Match: XP_022134496.1 (60S ribosomal protein L10 [Momordica charantia])

HSP 1 Score: 354 bits (909), Expect = 1.84e-122
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW 171
           KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKW 171

[Close]

BLAST of Cucsat.G8497 vs. ExPASy TrEMBL
Match: A0A803PVL3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 355 bits (912), Expect = 1.19e-123
Identity = 170/177 (96.05%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYM+KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMSKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYASKDF 177
           KPQG CARV+IGQVLLSVRCKD+NSQHAQEALRRAKFKFPGRQKIIVSRKWY + DF
Sbjct: 121 KPQGVCARVSIGQVLLSVRCKDNNSQHAQEALRRAKFKFPGRQKIIVSRKWYVALDF 177

[Close]

BLAST of Cucsat.G8497 vs. ExPASy TrEMBL
Match: V4SN61 (Ribosomal_L16 domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10032703mg PE=3 SV=1)

HSP 1 Score: 356 bits (913), Expect = 1.29e-123
Identity = 172/180 (95.56%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYASKDFSVF 180
           KPQGTCARVAIGQVLLSVRCKDSNS HAQEALRRAKFKFPGRQKIIVSRKWYA    + F
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWYAFLSMTAF 180

[Close]

BLAST of Cucsat.G8497 vs. ExPASy TrEMBL
Match: A0A2H5PNH4 (Ribosomal_L16 domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_152610 PE=3 SV=1)

HSP 1 Score: 356 bits (913), Expect = 1.29e-123
Identity = 172/180 (95.56%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWYASKDFSVF 180
           KPQGTCARVAIGQVLLSVRCKDSNS HAQEALRRAKFKFPGRQKIIVSRKWYA    + F
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWYAFLSMTAF 180

[Close]

BLAST of Cucsat.G8497 vs. ExPASy TrEMBL
Match: A0A0R0GFJ1 (Ribosomal_L16 domain-containing protein OS=Glycine max OX=3847 GN=100305619 PE=3 SV=1)

HSP 1 Score: 355 bits (910), Expect = 1.58e-123
Identity = 171/172 (99.42%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWY 172
           KPQGTCARVAIGQVLLSVRCKDSNS HAQEALRRAKFKFPGRQKIIVSRKWY
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWY 172

[Close]

BLAST of Cucsat.G8497 vs. ExPASy TrEMBL
Match: A0A445H7Q3 (60S ribosomal protein L10 isoform B OS=Glycine soja OX=3848 GN=D0Y65_039170 PE=3 SV=1)

HSP 1 Score: 355 bits (910), Expect = 1.58e-123
Identity = 171/172 (99.42%), Postives = 171/172 (99.42%), Query Frame = 0


Query: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60
           MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120
           SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWY 172
           KPQGTCARVAIGQVLLSVRCKDSNS HAQEALRRAKFKFPGRQKIIVSRKWY
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWY 172

The following BLAST results are available for this feature:

BLAST of Cucsat.G8497 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M5M7	7.4e-95	95.43	60S ribosomal protein L10 OS=Euphorbia esula OX=3993 GN=RPL10 PE=2 SV=1	[more]
Q9SPB3	2.2e-94	94.29	60S ribosomal protein L10 OS=Vitis riparia OX=96939 GN=RPL10 PE=2 SV=1	[more]
P93847	2.8e-94	94.86	60S ribosomal protein L10 OS=Solanum melongena OX=4111 GN=RPL10 PE=2 SV=1	[more]
A2ZCQ7	2.6e-92	92.57	60S ribosomal protein L10-1 OS=Oryza sativa subsp. indica OX=39946 GN=SC34 PE=2 ...	[more]
Q0ITS8	2.6e-92	92.57	60S ribosomal protein L10-1 OS=Oryza sativa subsp. japonica OX=39947 GN=SC34 PE=...	[more]

BLAST of Cucsat.G8497 vs. NCBI nr


Match Name	E-value	Identity	Description
ESR49203.1	2.65e-123	95.56	hypothetical protein CICLE_v10032703mg [Citrus clementina] >GAY53914.1 hypotheti...	[more]
RZB69720.1	3.26e-123	99.42	60S ribosomal protein L10 isoform B [Glycine soja]	[more]
KDO54934.1	5.92e-123	99.42	hypothetical protein CISIN_1g027696mg [Citrus sinensis]	[more]
KJB83920.1	6.35e-123	98.27	hypothetical protein B456_013G271500 [Gossypium raimondii]	[more]
XP_022134496.1	1.84e-122	100.00	60S ribosomal protein L10 [Momordica charantia]	[more]

BLAST of Cucsat.G8497 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A803PVL3	1.19e-123	96.05	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
V4SN61	1.29e-123	95.56	Ribosomal_L16 domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v...	[more]
A0A2H5PNH4	1.29e-123	95.56	Ribosomal_L16 domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_152610...	[more]
A0A0R0GFJ1	1.58e-123	99.42	Ribosomal_L16 domain-containing protein OS=Glycine max OX=3847 GN=100305619 PE=3...	[more]
A0A445H7Q3	1.58e-123	99.42	60S ribosomal protein L10 isoform B OS=Glycine soja OX=3848 GN=D0Y65_039170 PE=3...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016180	Ribosomal protein L10e/L16	PFAM	PF00252	Ribosomal_L16	coord: 13..129 e-value: 5.6E-31 score: 107.3
IPR016180	Ribosomal protein L10e/L16	CDD	cd01433	Ribosomal_L16_L10e	coord: 4..129 e-value: 5.41992E-46 score: 144.942
IPR036920	Ribosomal protein L10e/L16 superfamily	GENE3D	3.90.1170.10	Ribosomal protein L10e/L16	coord: 1..141 e-value: 9.8E-82 score: 274.2
IPR036920	Ribosomal protein L10e/L16 superfamily	SUPERFAMILY	54686	Ribosomal protein L16p/L10e	coord: 3..139
None	No IPR available	GENE3D	3.30.60.300		coord: 142..177 e-value: 6.1E-15 score: 56.4
None	No IPR available	PANTHER	PTHR11726:SF42	60S RIBOSOMAL PROTEIN L10-LIKE	coord: 1..180
IPR001197	Ribosomal protein L10e	PANTHER	PTHR11726	60S RIBOSOMAL PROTEIN L10	coord: 1..180
IPR018255	Ribosomal protein L10e, conserved site	PROSITE	PS01257	RIBOSOMAL_L10E	coord: 71..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G8497.T1	Cucsat.G8497.T1	mRNA
Cucsat.G8497.T2	Cucsat.G8497.T2	mRNA
Cucsat.G8497.T4	Cucsat.G8497.T4	mRNA
Cucsat.G8497.T3	Cucsat.G8497.T3	mRNA
Cucsat.G8497.T5	Cucsat.G8497.T5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome