Cucsat.G8433 (gene) Cucumber (B10) v3

Overview
NameCucsat.G8433
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionNAD(P)-binding Rossmann-fold superfamily protein
Locationctg1557: 2127784 .. 2130905 (-)
RNA-Seq ExpressionCucsat.G8433
SyntenyCucsat.G8433
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGAGAATTTCAATTTTGAGTGCAATCTAATTAAAGAGTGAAATGTAGAATGTGGCGTTACGGCAGCCATAAGTTCTTTTGAGAGTTTGCCAATGGAGTTGTTCTCCCTGTGCATTAGCCATTTCTAATTTTCTACTAAATTTATTGTCTACCTTAGCCTCCATCTTATTCCAAACAACCTCATTAATGGATTCCTGTGGCTGTCGCGTTTTACTTCATCAAATCAGGTTATGAACCTTCTCCTTCTGAATCACCCAATGTTCGCCCCTAGAACCCTCAGATCCTTTGCTCGGATGCCCACTTTTTCCTCTCTTTCTTCCAAATGGGAAGGTGGAGTTTCAATGGTGCAAGGAGCTTCCAGAGGAATTGGCCTCGAATTTGTCGGTTTCTCTCTCTCTCTCTCTCTTTTACTCCAAGCATTCACTTTTGAATTTGGTAATGGTATATTGTAGATGTTAGTTAGTTTCTCTGAAAGTGGTGTGAATTATTGACCTCCAAATTGCTCTCTCGTTACTTACTTTAGCTGTTGCTTAACAAATTAAAATTGGGTTTAAACTCATCTTGGTGTAGGTTAAACATCTGCTGGAGAAGAATGAAAAAGGACATGTTGTTGCTACATGTCGAAATCCTGGACAAGCTACAGGGCTTCTTGAGCTGAAAAACAAGTTTGATGAACGCCTTTGCATTCTACAGTTGGATGTGACCAACGAAACCACCATTAAGGTTTCACTCTGTTTCTTAAACATGGTTTTACTTTTATCTTTCACAGTAGATCACATTGGTTTGGTTGGCTTGGTTGCTTACCTTTTTATTGAAGATAGAAGTTTTGGTTGAAGTTATATCAAATTCTATACTTGTTTAATCTTCTAATGATTTAAGCTAGTTTTTGGTTTTGGTGCATCTGGGATTTTACAGATTGATAGAAGCAGGTTTTTTCTGAACCCCAAGTAAAAGTAGAATACTCTCACAAGTTTTAAGCGTTGAATTAGGTTGTGAAATCTACTTTATAATGAAGAAATTTTTTCTTTTTACTGTGCATTTTGTATACGATTTTTATTATTTGTTTGTCAATGTTACAATGTATTTCAGGCATCTGCAAAGTCTATAGAAGAAAGATATGGGTCGTTGAATTTGCTAATTAATGCGTCTGGCATTCTTTCAATTCCTAATGTAATCCAACCAGGTATTTCTTCATAGAATTAATAATTCCATGGTTATTTGAACAGCATTACGCTTAGTTCGTTACGGTCCCATCATATTAATGCCATTCGTTCCTTATGCAACATTGTAGTCGTCTTTTTCTTGGTGAATTATAGATTTTACTTCTTTTCCTCCAACCTAGACCTAAAATTGAGATATACTTCTGATTTACGTAATAGAATTGACAATTGACTCCATGTTTTTCCTTTATTGGTTCATGTAACTTAGTAGCCGTGATCTAAGCTATTGGTCATGTTCTGGTTCCAATGCAGAAACTACCCTGTATAAAGTGGAGAAATCTTCTTTGCTTCATGCTTACGAGGTTAATGCTGTTGGTCCTATTCTAGTGATCAAGGTGAAACTCACTCAAGCCTTTTCTGATTGTTTACAATATTAGTTTTCACTTTTCAGTAAGAAATTTAGGCTCATTCCACTCGAATCTTAGACTTTGCAATTGTTTCCACATTTCTTCAAAAACTTGTCTTTATTTCCATTCAGTTGAAACTACTTCCCTAAACATGCTCTTGCAGCTGAAATAATTTCGGGATAGTTATTGGCTTTTATTCTATCCATCACTCTATTTCTATTTAGAAAAGGAATGTATAATTCTTCTTTCAACCAGTTACTGACTCTGTATAGTCTGAAGGGTTGCACAAAATAAACCACCAATTGAACGTTTCTTTGTCTCGAGTTCAAGTATAAGCATATTGTTTAGTTAGTACTGACTGCTGTGTGCTATGATTTATTTGAGCAGCACTTGTGGCCTTTTCTGAAGGCAGGGGGAGGTTCTGGAACAGAAAGAGAAGTTGCTGTCGTTGCCAATCTAAGCGCTCGGGTGGGATCAATTGGAGATAACCGTCTTGGGGGTTGGCATTCTTACCGAGCTTCAAAGACAGCACTTAACCAATGTATAGTGTCTTCCTTCTTGTCTTTACATTAACCCGCCCATTACATGGTTCATTAATATGGACAACCTAAAGGGGAAAGAAACGGAAATAGTTTTTTTTCTGATTATGCTTTTATCTTTTAACTTGAATTCAGATCTCTTGTTTTTTGCATATCTTTTCTGCATGATAATATGCTTTCACGTTCTTCAATCAAACGAAAAAAAGTTCATTTTCAATACACACACATACACATTCATTGCAGAAATTCAAAAATCCAACCAACAAAGATCGTTTAAACTATGAAAAATTGAATTGAAGAACTGCAGTTTCCGCTTACCAGTTATTCATATTAGATGTTTTATGAATTTGTTAATTATTTGTCTGCATAAATTACAGTACAGAGGAGCTAAATGTTACACTTTATGACATCATCTAAAATATCTTTCGTTTTTGCTTGCAAAGTGACAAAAAACGTGTCAGTAGAATTTGCAAGGAAGAAAGATCCAATTGTATGCATATTGTTGCATCCAGGCACAGTGGACACCGATCTGTCTAGGCCATTTCAGAGAAATGTTCCTGAAGGCAAACTTTTTACAAAAGAGTTTTCAGTCCAAAAGCTCATGACAATCATCAACAATGCAAAGAGCCAAGACAACGGCAGGTTTTTTGCTTGGGATGGTCAGGAAATTCCCTGGTAGCATGAACTTCAGTTTAGTCAACCTTTTATACATAAAATTATAGATACCTCTCATTTTAGGTGAGCACGGCTGTTTCAACACGAGAGGATCAAACATGGGGGTATTCTGCTTTGATTTAGTGATTATTTTATATGTAATAAATACAAAGAGACTCAAATGTTCAAAAACCATGGAGAAAGCAAGAACCACTTGAGTGAAGAAACAGTGTGAAGTTATATTTTCATTCTTTGTTCTTTGTAGTTATTGAGGAAATTACAATATATAGTAAAAAAAATCTTGGAAGTGTTTTCAGTATCGAGGCTCTTACTAACTTGATAGAATCCTTATGTGCCTACCTTCCTTCCTCAGTATCATGCATCTTGTGATTACTTAATAATCTAGTTACATTGTCAAATATGTATTTCAAATTTGGCTGATGCCCACTTGATTGATCTGTACACATCAGTGCCAGGTTTATTGCTGCTTTAGCCTGATTCACCATGCTCTCTCTTTGTAGCTTTATATCTTCGTTGATCACTGCTTGCAAATTGTTGGGAAGTTGCATTTTTATGTATCCAACAAAATCAGATTCGCCTTGCTTGATCTCATCCCGCAGCTGCGGATTCACTATCATTTCAAACAAGAGCACGCCGAATTTGTAGATATCTGATACATCAACTGCCATGTTAATTTTCTCATGCTAAAGTTCATGAAGAC

Coding sequence (CDS)

ATGAACCTTCTCCTTCTGAATCACCCAATGTTCGCCCCTAGAACCCTCAGATCCTTTGCTCGGATGCCCACTTTTTCCTCTCTTTCTTCCAAATGGGAAGGTGGAGTTTCAATGGTGCAAGGAGCTTCCAGAGGAATTGGCCTCGAATTTGTTAAACATCTGCTGGAGAAGAATGAAAAAGGACATGTTGTTGCTACATGTCGAAATCCTGGACAAGCTACAGGGCTTCTTGAGCTGAAAAACAAGTTTGATGAACGCCTTTGCATTCTACAGTTGGATGTGACCAACGAAACCACCATTAAGGTTTCACTCTGTTTCTTAAACATGGTTTTACTTTTATCTTTCACAGTAGATCACATTGGTTTGGTTGGCTTGGTTGCTTACCTTTTTATTGAAGATAGAAGTTTTGGTTGA

Protein sequence

MNLLLLNHPMFAPRTLRSFARMPTFSSLSSKWEGGVSMVQGASRGIGLEFVKHLLEKNEKGHVVATCRNPGQATGLLELKNKFDERLCILQLDVTNETTIKVSLCFLNMVLLLSFTVDHIGLVGLVAYLFIEDRSFG
Homology
[Close]
BLAST of Cucsat.G8433 vs. NCBI nr
Match: XP_031736232.1 (uncharacterized protein LOC101220494 isoform X2 [Cucumis sativus] >KAE8653327.1 hypothetical protein Csa_023342 [Cucumis sativus])

HSP 1 Score: 205 bits (521), Expect = 1.37e-63
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0 

Query: 1   MNLLLLNHPMFAPRTLRSFARMPTFSSLSSKWEGGVSMVQGASRGIGLEFVKHLLEKNEK 60
           MNLLLLNHPMFAPRTLRSFARMPTFSSLSSKWEGGVSMVQGASRGIGLEFVKHLLEKNEK
Sbjct: 1   MNLLLLNHPMFAPRTLRSFARMPTFSSLSSKWEGGVSMVQGASRGIGLEFVKHLLEKNEK 60

Query: 61  GHVVATCRNPGQATGLLELKNKFDERLCILQLDVTNETTIKVS 103
           GHVVATCRNPGQATGLLELKNKFDERLCILQLDVTNETTIK S
Sbjct: 61  GHVVATCRNPGQATGLLELKNKFDERLCILQLDVTNETTIKAS 103

[Close]
BLAST of Cucsat.G8433 vs. NCBI nr
Match: XP_004135748.2 (uncharacterized protein LOC101220494 isoform X1 [Cucumis sativus])

HSP 1 Score: 205 bits (521), Expect = 2.73e-63
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0 

Query: 1   MNLLLLNHPMFAPRTLRSFARMPTFSSLSSKWEGGVSMVQGASRGIGLEFVKHLLEKNEK 60
           MNLLLLNHPMFAPRTLRSFARMPTFSSLSSKWEGGVSMVQGASRGIGLEFVKHLLEKNEK
Sbjct: 1   MNLLLLNHPMFAPRTLRSFARMPTFSSLSSKWEGGVSMVQGASRGIGLEFVKHLLEKNEK 60

Query: 61  GHVVATCRNPGQATGLLELKNKFDERLCILQLDVTNETTIKVS 103
           GHVVATCRNPGQATGLLELKNKFDERLCILQLDVTNETTIK S
Sbjct: 61  GHVVATCRNPGQATGLLELKNKFDERLCILQLDVTNETTIKAS 103

[Close]
BLAST of Cucsat.G8433 vs. NCBI nr
Match: XP_008445830.1 (PREDICTED: C-factor [Cucumis melo])

HSP 1 Score: 190 bits (482), Expect = 2.15e-57
Identity = 95/103 (92.23%), Postives = 96/103 (93.20%), Query Frame = 0 

Query: 1   MNLLLLNHPMFAPRTLRSFARMPTFSSLSSKWEGGVSMVQGASRGIGLEFVKHLLEKNEK 60
           MNLL LNHPMFA RTLRSFAR PTFSSLS  WEGGVSMVQGASRGIGLEFVKHLLE NEK
Sbjct: 1   MNLLPLNHPMFAARTLRSFARSPTFSSLSPNWEGGVSMVQGASRGIGLEFVKHLLENNEK 60

Query: 61  GHVVATCRNPGQATGLLELKNKFDERLCILQLDVTNETTIKVS 103
           GHVVATCRNPGQATGLLELKNKFDERLCIL+LDVTNETTIK S
Sbjct: 61  GHVVATCRNPGQATGLLELKNKFDERLCILELDVTNETTIKAS 103

[Close]
BLAST of Cucsat.G8433 vs. NCBI nr
Match: KAA0047063.1 (C-factor [Cucumis melo var. makuwa] >TYK05094.1 C-factor [Cucumis melo var. makuwa])

HSP 1 Score: 176 bits (446), Expect = 2.37e-52
Identity = 87/94 (92.55%), Postives = 88/94 (93.62%), Query Frame = 0 

Query: 10  MFAPRTLRSFARMPTFSSLSSKWEGGVSMVQGASRGIGLEFVKHLLEKNEKGHVVATCRN 69
           MFA RTLRSFAR PTFSSLS  WEGGVSMVQGASRGIGLEFVKHLLE NEKGHVVATCRN
Sbjct: 1   MFAARTLRSFARSPTFSSLSPNWEGGVSMVQGASRGIGLEFVKHLLENNEKGHVVATCRN 60

Query: 70  PGQATGLLELKNKFDERLCILQLDVTNETTIKVS 103
           PGQATGLLELKNKFDERLCIL+LDVTNETTIK S
Sbjct: 61  PGQATGLLELKNKFDERLCILELDVTNETTIKAS 94

[Close]
BLAST of Cucsat.G8433 vs. NCBI nr
Match: XP_038894686.1 (C-factor [Benincasa hispida])

HSP 1 Score: 174 bits (442), Expect = 2.35e-51
Identity = 87/103 (84.47%), Postives = 93/103 (90.29%), Query Frame = 0 

Query: 1   MNLLLLNHPMFAPRTLRSFARMPTFSSLSSKWEGGVSMVQGASRGIGLEFVKHLLEKNEK 60
           MNLLL N PMFA   L+S AR P FSS+++KWEGGVSMVQGASRGIGLEFV+HLLEKNEK
Sbjct: 1   MNLLLHNQPMFAAGILKSLARRPNFSSVAAKWEGGVSMVQGASRGIGLEFVRHLLEKNEK 60

Query: 61  GHVVATCRNPGQATGLLELKNKFDERLCILQLDVTNETTIKVS 103
           GHVVATCRNPGQATGLLELKNKF ERLCIL+LDVTNETTIK S
Sbjct: 61  GHVVATCRNPGQATGLLELKNKFAERLCILELDVTNETTIKAS 103

[Close]
BLAST of Cucsat.G8433 vs. ExPASy TrEMBL
Match: A0A1S3BEG0 (C-factor OS=Cucumis melo OX=3656 GN=LOC103488731 PE=4 SV=1)

HSP 1 Score: 190 bits (482), Expect = 1.04e-57
Identity = 95/103 (92.23%), Postives = 96/103 (93.20%), Query Frame = 0 

Query: 1   MNLLLLNHPMFAPRTLRSFARMPTFSSLSSKWEGGVSMVQGASRGIGLEFVKHLLEKNEK 60
           MNLL LNHPMFA RTLRSFAR PTFSSLS  WEGGVSMVQGASRGIGLEFVKHLLE NEK
Sbjct: 1   MNLLPLNHPMFAARTLRSFARSPTFSSLSPNWEGGVSMVQGASRGIGLEFVKHLLENNEK 60

Query: 61  GHVVATCRNPGQATGLLELKNKFDERLCILQLDVTNETTIKVS 103
           GHVVATCRNPGQATGLLELKNKFDERLCIL+LDVTNETTIK S
Sbjct: 61  GHVVATCRNPGQATGLLELKNKFDERLCILELDVTNETTIKAS 103

[Close]
BLAST of Cucsat.G8433 vs. ExPASy TrEMBL
Match: A0A5D3C1E8 (C-factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1317G00700 PE=4 SV=1)

HSP 1 Score: 176 bits (446), Expect = 1.15e-52
Identity = 87/94 (92.55%), Postives = 88/94 (93.62%), Query Frame = 0 

Query: 10  MFAPRTLRSFARMPTFSSLSSKWEGGVSMVQGASRGIGLEFVKHLLEKNEKGHVVATCRN 69
           MFA RTLRSFAR PTFSSLS  WEGGVSMVQGASRGIGLEFVKHLLE NEKGHVVATCRN
Sbjct: 1   MFAARTLRSFARSPTFSSLSPNWEGGVSMVQGASRGIGLEFVKHLLENNEKGHVVATCRN 60

Query: 70  PGQATGLLELKNKFDERLCILQLDVTNETTIKVS 103
           PGQATGLLELKNKFDERLCIL+LDVTNETTIK S
Sbjct: 61  PGQATGLLELKNKFDERLCILELDVTNETTIKAS 94

[Close]
BLAST of Cucsat.G8433 vs. ExPASy TrEMBL
Match: A0A6J1GSX0 (uncharacterized protein LOC111457138 OS=Cucurbita moschata OX=3662 GN=LOC111457138 PE=4 SV=1)

HSP 1 Score: 169 bits (429), Expect = 1.04e-49
Identity = 85/103 (82.52%), Postives = 93/103 (90.29%), Query Frame = 0 

Query: 1   MNLLLLNHPMFAPRTLRSFARMPTFSSLSSKWEGGVSMVQGASRGIGLEFVKHLLEKNEK 60
           M L LLN PMFA  TLRS AR  +FSSL++KWEGGVSMVQGASRGIGLEFV+HLLEKNEK
Sbjct: 1   MKLQLLNQPMFAAGTLRSLARRASFSSLAAKWEGGVSMVQGASRGIGLEFVRHLLEKNEK 60

Query: 61  GHVVATCRNPGQATGLLELKNKFDERLCILQLDVTNETTIKVS 103
           GHVVATCRNPG+ATGLLELK+KF ERLCIL+LDVTNE+TIK S
Sbjct: 61  GHVVATCRNPGKATGLLELKDKFSERLCILELDVTNESTIKES 103

[Close]
BLAST of Cucsat.G8433 vs. ExPASy TrEMBL
Match: A0A6J1K0G2 (uncharacterized protein LOC111490457 OS=Cucurbita maxima OX=3661 GN=LOC111490457 PE=4 SV=1)

HSP 1 Score: 161 bits (407), Expect = 2.12e-46
Identity = 80/99 (80.81%), Postives = 90/99 (90.91%), Query Frame = 0 

Query: 5   LLNHPMFAPRTLRSFARMPTFSSLSSKWEGGVSMVQGASRGIGLEFVKHLLEKNEKGHVV 64
           LLN PMFA  TLRS AR  +FSSL++KWEGGVSMVQGASRGIGLEFV+HLLEKNEKGHVV
Sbjct: 5   LLNQPMFAAGTLRSLARRASFSSLAAKWEGGVSMVQGASRGIGLEFVRHLLEKNEKGHVV 64

Query: 65  ATCRNPGQATGLLELKNKFDERLCILQLDVTNETTIKVS 103
           ATCR+PG+ATGLLELK+KF ERLCIL+LDVT E++IK S
Sbjct: 65  ATCRSPGKATGLLELKDKFSERLCILELDVTIESSIKES 103

[Close]
BLAST of Cucsat.G8433 vs. ExPASy TrEMBL
Match: A0A6J1CNB5 (uncharacterized protein LOC111012678 OS=Momordica charantia OX=3673 GN=LOC111012678 PE=4 SV=1)

HSP 1 Score: 155 bits (391), Expect = 5.68e-44
Identity = 77/102 (75.49%), Postives = 89/102 (87.25%), Query Frame = 0 

Query: 3   LLLLNHPMFAPRTLRSFA-RMPTFSSLSSKWEGGVSMVQGASRGIGLEFVKHLLEKNEKG 62
           L+ LN PMFA  TLRS A R   FSS ++KWEGGVSMVQGASRGIGL+FV+HLL+KNEKG
Sbjct: 4   LIRLNQPMFAAGTLRSLAARRANFSSAAAKWEGGVSMVQGASRGIGLQFVRHLLQKNEKG 63

Query: 63  HVVATCRNPGQATGLLELKNKFDERLCILQLDVTNETTIKVS 103
           HVVATCRNPG++TGL+ELK+KF ERLCIL+LDVT E+TIK S
Sbjct: 64  HVVATCRNPGESTGLIELKDKFSERLCILELDVTKESTIKAS 105

The following BLAST results are available for this feature:
BLAST of Cucsat.G8433 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G8433 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031736232.11.37e-6399.03uncharacterized protein LOC101220494 isoform X2 [Cucumis sativus] >KAE8653327.1 ... [more]
XP_004135748.22.73e-6399.03uncharacterized protein LOC101220494 isoform X1 [Cucumis sativus][more]
XP_008445830.12.15e-5792.23PREDICTED: C-factor [Cucumis melo][more]
KAA0047063.12.37e-5292.55C-factor [Cucumis melo var. makuwa] >TYK05094.1 C-factor [Cucumis melo var. maku... [more]
XP_038894686.12.35e-5184.47C-factor [Benincasa hispida][more]
BLAST of Cucsat.G8433 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BEG01.04e-5792.23C-factor OS=Cucumis melo OX=3656 GN=LOC103488731 PE=4 SV=1[more]
A0A5D3C1E81.15e-5292.55C-factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1317G00700 PE=4... [more]
A0A6J1GSX01.04e-4982.52uncharacterized protein LOC111457138 OS=Cucurbita moschata OX=3662 GN=LOC1114571... [more]
A0A6J1K0G22.12e-4680.81uncharacterized protein LOC111490457 OS=Cucurbita maxima OX=3661 GN=LOC111490457... [more]
A0A6J1CNB55.68e-4475.49uncharacterized protein LOC111012678 OS=Momordica charantia OX=3673 GN=LOC111012... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 21..107
e-value: 1.4E-13
score: 52.2
NoneNo IPR availablePANTHERPTHR43544SHORT-CHAIN DEHYDROGENASE/REDUCTASEcoord: 35..101
NoneNo IPR availablePANTHERPTHR43544:SF12ZGC:65997coord: 35..101
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 38..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G8433.T14Cucsat.G8433.T14mRNA
Cucsat.G8433.T2Cucsat.G8433.T2mRNA
Cucsat.G8433.T1Cucsat.G8433.T1mRNA
Cucsat.G8433.T4Cucsat.G8433.T4mRNA
Cucsat.G8433.T3Cucsat.G8433.T3mRNA
Cucsat.G8433.T9Cucsat.G8433.T9mRNA
Cucsat.G8433.T18Cucsat.G8433.T18mRNA
Cucsat.G8433.T26Cucsat.G8433.T26mRNA
Cucsat.G8433.T20Cucsat.G8433.T20mRNA
Cucsat.G8433.T15Cucsat.G8433.T15mRNA
Cucsat.G8433.T11Cucsat.G8433.T11mRNA
Cucsat.G8433.T21Cucsat.G8433.T21mRNA
Cucsat.G8433.T29Cucsat.G8433.T29mRNA
Cucsat.G8433.T12Cucsat.G8433.T12mRNA
Cucsat.G8433.T17Cucsat.G8433.T17mRNA
Cucsat.G8433.T16Cucsat.G8433.T16mRNA
Cucsat.G8433.T6Cucsat.G8433.T6mRNA
Cucsat.G8433.T8Cucsat.G8433.T8mRNA
Cucsat.G8433.T27Cucsat.G8433.T27mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0016491 oxidoreductase activity