Cucsat.G8366 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G8366
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	RING-CH-type domain-containing protein
Location	ctg1557: 441378 .. 444447 (-)
RNA-Seq Expression	Cucsat.G8366
Synteny	Cucsat.G8366

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTAAATTGTTACAAATTTTTGAAGTTAAATTTGTATTTATAAACGTTCATCTCATCCCAAGATAAACTGTTGAGGTGAAAACTGAAAACTGTGTGCATAATATGGGAAAGAGATTGAGACTGTAGCTTAATGATCCTTAAATAATCGGAAAAAGCTGCAAATTCTGTCTCTCACGCATCCCTTTCCTCTTTTGCGTCTTCTTCAATAATCACTGTTCTTGTCACGCTTTTTTCTTTTAATTTCCAATTTCCTTTTCTCTTTGAACAACCACAATCGATACTGACACGCCGAAAAAGAGTTTCACTTTGTGTCTGTATTTGTTTGTTAGAGACGAACTTGATATTATCATCTTTGATAAAGAGAGAGAATCAAGAAATCAACAAACAGACAAAAGCCCATAACCCCACGTTTGCCCTCTCTTTCTTTCTCTTGATTCCAAGGTGTTTTACTTTAGACTAATCTCATGGTTAAAAGGGATGAGCTCTTAATTTACTGTGTGTTTATGATAATTTCATATTCTTGATTGTGGTATGGTATTTCTTCTAAATTTTGATTTCGTGTTCTACTTGTACATTCTGAAATCTGTATGGGAATTGCAACTGTACATGGTTAGGACTTAGAAGGAAAGAGGAAGGGGAGAAAAGAAATGGTTATTACTTATAAATACCACGGAGCCCTTCTTCTTAATCTTTTCATCTTGCTGGGACCGCCATGTTTTCCTGTACTGTTTGTTAATACATATCTTTTGGTTTTTCGTCAGTCGAATGCCATTTCTCCATCTGGGTTTCACAGTATGTCGGCGGTTGAAGCTCCCCGTGGTGATTCCGACCCTGCAAATCCGAGCTCCTTGCCATTTCGCGATGCTCGTTCAGCTGCTGGAAGCTGCAGCGACATGTCAGTACTTGATGATTCTGATGACCAGTCGTGGCACTCGGTTTTTGACTCCACAGCCTGGGGATCTCACGGCGAGGGTCAATTTTCCGGTGAGATAGAGGGCGTTCCGGACGCCGAAATGGGTCATTTCATCTCGGAAAGCTCGTCGGAGGTGGATTTGGAGAGCGGGGATTTGGAGGTGAAGGTGCATTTGGGGAAGATCGAAAGGGACTGCAGAATTTGTCATTTGGAGCTGGAAAGCAGTGGAGGAAGAGATAATTCTGATACTCCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTACTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAAATCAAGGGAAACACGTAAGTATTCATTCTAATTAACTCCCATTTTTTCCTATCAGATTTCTTTCATTCCCTCAGAAACCCAATTCTTAATAGAATCCTTTGATTATCATTGGCTTCGTTGAAGTTTTACCTAGACTTGGATTAACTTGGGTTTTGCTAGTAGTTTGATTGGAGATAAATTAAAAATCTAAGCTCCTGAAAGATAAGAAGACGAGTTTTTTGCTTGGGAAAGATTTCTAAACTTTCTCTGCTTCTTCTTTTAGCAGCAATTCTCTTGAGTTTTCTGCCATGAATTACCCTCAAACAGTTTCATCACTTTGTTGTATTGTGTAAATTCACTATGACTACAAACTTAAAGTGGTTGGATGGATCTTCTGCTGTCAGCATTTGGTTTTCTTTATTGTACTAGAAGTAATTAACTCAATTTTGGTGGCTTCCATCTGTTGTAACTTCTAAGTTGTTCAAAGTTAACATTTATCAATATAGTATCATGTAGATAAGATAAAAGAATGATATATGACATATCTGAAGTTTGGATATCTCCTTTTTTTCCTTTGCATTTCAGAATATGATGGTGTCACACATAAGTTCCAATAAATTTCCATGTGTCCAAGTTGAACTTACAAACTTGCCCATAGCTAATCCGTTCCATTTTTCTTTAATTCTTCTATTTGTGATAATGTAAATCATTCAGACACTTAGAAATTAGGCAGACAAATTAGAATTCAGGTTAGAAACCTTGCATCAACTTGATTTTGTGTGTAAACAGCTTCACTATTGAGAATGAATATATTGTCATTAAATGGTGTTTGGTGCACTGAAGTATGAAGTTAATATATTAGAGTTAGAAAATGGGTGTAGAGTTGTAAGATGAAATTTCCTACTAAAAGTGCAAACTTTATCGGTATTTGCTATCAAAATTGATTTGCTGAACAACTTATGAATTGGTGAGCTAGACACCCCAAAAGTTTATGTATTGTCATATTAGAAGGTATTCAACAGATATAAATGAGGTATATGATCGTTTGTATGAGAACGACTATTCTCAAACGTAGGAACACCATTAGACATCTTGAAGGTGCTGGAGATCATTCCAACTCTCTAGACAAGAACTCTCAATCAGCCAAATTTAGATTTCTTTTGGCTAGTTGGTGTATATGACTCTCCCATTTCAAAAAATTCGAACCTCTTGAATTATGTTTAAGTTGAAGATTTGGCAATACATTTTTGTTACTATTAGCTTGACAAGTGATACAATCTTTTCCTTGCAGTATTTGCGAGATATGTGGGGCAACTGCACAAAACGTGGCAAGTCAACAAATAAACGAACCGAGCAATGCAGTTGCGACTGCAGTAGCATCCTCAGCTCTGACAGCACCCCTGACTCTAGTCGAGACTCGAACAATCTTTCACGGTCGACGCATTATGAACTTTCTGCTTGCTTGCATGCTCCTTGCATTTGCAATGTCCTGGCTTTTTCATTTCAAGTTAATGTCATAGACTTAGGAAGAAGGAAGAAAATTAATGAAGAAAGGAAAATGTAGAGGCAATTTGGGTTCTTCAGGCCTTTGTATATATATTTACACTTTCAGTTTGATTAGTTAATTTTGAAGGGGTTGGTTTATTTAGGCATTTCTCAATTGTAGTGTAGTGAATGGCTAATGAATAGGGTTCAGTAAATAGAAATACATTTCTCTAAATCTGTGTTGGTTGACATGAGCAACTACACAAGTACAAAAATTGTCTGGCAGTCATTTTAAAAAAATATAAACAAAATTTTCTAATTTTTTACATCTAAATATTTTATTTGTTAAATTTTGAATGTTTGAATTT

Coding sequence (CDS)

ATGGTTATTACTTATAAATACCACGGAGCCCTTCTTCTTAATCTTTTCATCTTGCTGGGACCGCCATGTTTTCCTGTACTGTTTGTTAATACATATCTTTTGGTTTTTCGTCAGTCGAATGCCATTTCTCCATCTGGGTTTCACAGTATGTCGGCGGTTGAAGCTCCCCGTGGTGATTCCGACCCTGCAAATCCGAGCTCCTTGCCATTTCGCGATGCTCGTTCAGCTGCTGGAAGCTGCAGCGACATGTCAGTACTTGATGATTCTGATGACCAGTCGTGGCACTCGGTTTTTGACTCCACAGCCTGGGGATCTCACGGCGAGGGTCAATTTTCCGGTGAGATAGAGGGCGTTCCGGACGCCGAAATGGGTCATTTCATCTCGGAAAGCTCGTCGGAGGTGGATTTGGAGAGCGGGGATTTGGAGGTGAAGGTGCATTTGGGGAAGATCGAAAGGGACTGCAGAATTTGTCATTTGGAGCTGGAAAGCAGTGGAGGAAGAGATAATTCTGATACTCCAATTCAGCTTGGTTGTTGCTGTCGAGGTGATTTGGGTACTGCCCACAAGCAATGTGCTGAGACTTGGTTCAAAATCAAGGGAAACACTATTTGCGAGATATGTGGGGCAACTGCACAAAACGTGGCAAGTCAACAAATAAACGAACCGAGCAATGCAGTTGCGACTGCAGTAGCATCCTCAGCTCTGACAGCACCCCTGACTCTAGTCGAGACTCGAACAATCTTTCACGGTCGACGCATTATGAACTTTCTGCTTGCTTGCATGCTCCTTGCATTTGCAATGTCCTGGCTTTTTCATTTCAAGTTAATGTCATAG

Protein sequence

MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATAVASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS

Homology

[Close]

BLAST of Cucsat.G8366 vs. NCBI nr
Match: XP_004145266.2 (uncharacterized protein LOC101212160 isoform X1 [Cucumis sativus] >KGN65776.1 hypothetical protein Csa_023291 [Cucumis sativus])

HSP 1 Score: 549 bits (1415), Expect = 4.83e-197
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDS 60
           MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDS
Sbjct: 1   MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDS 60

Query: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPD 120
           DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPD
Sbjct: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPD 120

Query: 121 AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180
           AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC
Sbjct: 121 AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180

Query: 181 RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATAVASSALTAPLT 240
           RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATAVASSALTAPLT
Sbjct: 181 RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATAVASSALTAPLT 240

Query: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 277
           LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 277

[Close]

BLAST of Cucsat.G8366 vs. NCBI nr
Match: XP_008457414.1 (PREDICTED: uncharacterized protein LOC103497107 isoform X1 [Cucumis melo] >KAA0031780.1 E3 ubiquitin-protein ligase MARCH1 [Cucumis melo var. makuwa] >TYJ97351.1 E3 ubiquitin-protein ligase MARCH1 [Cucumis melo var. makuwa])

HSP 1 Score: 535 bits (1377), Expect = 2.89e-191
Identity = 272/277 (98.19%), Postives = 273/277 (98.56%), Query Frame = 0


Query: 1   MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDS 60
           MVITYKYHG+LL NLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFH MSAVEAPRGDS
Sbjct: 1   MVITYKYHGSLL-NLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHRMSAVEAPRGDS 60

Query: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPD 120
           DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGV D
Sbjct: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVLD 120

Query: 121 AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180
           AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC
Sbjct: 121 AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180

Query: 181 RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATAVASSALTAPLT 240
           RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVA AVASSALTAPLT
Sbjct: 181 RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAAVASSALTAPLT 240

Query: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 277
           LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 276

[Close]

BLAST of Cucsat.G8366 vs. NCBI nr
Match: XP_011658411.1 (uncharacterized protein LOC101212160 isoform X2 [Cucumis sativus])

HSP 1 Score: 451 bits (1160), Expect = 5.93e-159
Identity = 228/228 (100.00%), Postives = 228/228 (100.00%), Query Frame = 0


Query: 50  MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 109
           MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60

Query: 110 QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 169
           QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN
Sbjct: 61  QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120

Query: 170 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATA 229
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATA
Sbjct: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATA 180

Query: 230 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 277
           VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228

[Close]

BLAST of Cucsat.G8366 vs. NCBI nr
Match: XP_008457415.1 (PREDICTED: uncharacterized protein LOC103497107 isoform X2 [Cucumis melo])

HSP 1 Score: 445 bits (1145), Expect = 1.15e-156
Identity = 226/228 (99.12%), Postives = 226/228 (99.12%), Query Frame = 0


Query: 50  MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 109
           MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60

Query: 110 QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 169
           QFSGEIEGV DAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN
Sbjct: 61  QFSGEIEGVLDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120

Query: 170 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATA 229
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVA A
Sbjct: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAA 180

Query: 230 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 277
           VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228

[Close]

BLAST of Cucsat.G8366 vs. NCBI nr
Match: XP_038895035.1 (uncharacterized protein LOC120083374 [Benincasa hispida] >XP_038895036.1 uncharacterized protein LOC120083374 [Benincasa hispida])

HSP 1 Score: 434 bits (1117), Expect = 2.12e-152
Identity = 220/228 (96.49%), Postives = 221/228 (96.93%), Query Frame = 0


Query: 50  MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 109
           MSAVEAPRGD DPANPSS+ FRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 1   MSAVEAPRGDPDPANPSSVLFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60

Query: 110 QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 169
           QFSGEIEGVPDAEMGHFISE SSEVDLESGDLEVKVHLGKIERDCRICHLELES GGRDN
Sbjct: 61  QFSGEIEGVPDAEMGHFISECSSEVDLESGDLEVKVHLGKIERDCRICHLELESGGGRDN 120

Query: 170 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATA 229
            DTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVA A
Sbjct: 121 FDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAA 180

Query: 230 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 277
           V SSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 181 VPSSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228

[Close]

BLAST of Cucsat.G8366 vs. ExPASy TrEMBL
Match: A0A0A0M0P0 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G527920 PE=4 SV=1)

HSP 1 Score: 549 bits (1415), Expect = 2.34e-197
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0


Query: 1   MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDS 60
           MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDS
Sbjct: 1   MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDS 60

Query: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPD 120
           DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPD
Sbjct: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPD 120

Query: 121 AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180
           AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC
Sbjct: 121 AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180

Query: 181 RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATAVASSALTAPLT 240
           RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATAVASSALTAPLT
Sbjct: 181 RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATAVASSALTAPLT 240

Query: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 277
           LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 277

[Close]

BLAST of Cucsat.G8366 vs. ExPASy TrEMBL
Match: A0A5D3BFF6 (E3 ubiquitin-protein ligase MARCH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001610 PE=4 SV=1)

HSP 1 Score: 535 bits (1377), Expect = 1.40e-191
Identity = 272/277 (98.19%), Postives = 273/277 (98.56%), Query Frame = 0


Query: 1   MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDS 60
           MVITYKYHG+LL NLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFH MSAVEAPRGDS
Sbjct: 1   MVITYKYHGSLL-NLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHRMSAVEAPRGDS 60

Query: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPD 120
           DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGV D
Sbjct: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVLD 120

Query: 121 AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180
           AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC
Sbjct: 121 AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180

Query: 181 RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATAVASSALTAPLT 240
           RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVA AVASSALTAPLT
Sbjct: 181 RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAAVASSALTAPLT 240

Query: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 277
           LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 276

[Close]

BLAST of Cucsat.G8366 vs. ExPASy TrEMBL
Match: A0A1S3C6R6 (uncharacterized protein LOC103497107 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497107 PE=4 SV=1)

HSP 1 Score: 535 bits (1377), Expect = 1.40e-191
Identity = 272/277 (98.19%), Postives = 273/277 (98.56%), Query Frame = 0


Query: 1   MVITYKYHGALLLNLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHSMSAVEAPRGDS 60
           MVITYKYHG+LL NLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFH MSAVEAPRGDS
Sbjct: 1   MVITYKYHGSLL-NLFILLGPPCFPVLFVNTYLLVFRQSNAISPSGFHRMSAVEAPRGDS 60

Query: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVPD 120
           DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGV D
Sbjct: 61  DPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEGQFSGEIEGVLD 120

Query: 121 AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180
           AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC
Sbjct: 121 AEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDNSDTPIQLGCCC 180

Query: 181 RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATAVASSALTAPLT 240
           RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVA AVASSALTAPLT
Sbjct: 181 RGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAAVASSALTAPLT 240

Query: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 277
           LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 241 LVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 276

[Close]

BLAST of Cucsat.G8366 vs. ExPASy TrEMBL
Match: A0A1S3C517 (uncharacterized protein LOC103497107 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497107 PE=4 SV=1)

HSP 1 Score: 445 bits (1145), Expect = 5.55e-157
Identity = 226/228 (99.12%), Postives = 226/228 (99.12%), Query Frame = 0


Query: 50  MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 109
           MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG
Sbjct: 1   MSAVEAPRGDSDPANPSSLPFRDARSAAGSCSDMSVLDDSDDQSWHSVFDSTAWGSHGEG 60

Query: 110 QFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 169
           QFSGEIEGV DAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN
Sbjct: 61  QFSGEIEGVLDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGGRDN 120

Query: 170 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVATA 229
           SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVA A
Sbjct: 121 SDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAVAAA 180

Query: 230 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 277
           VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 181 VASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 228

[Close]

BLAST of Cucsat.G8366 vs. ExPASy TrEMBL
Match: A0A6J1I103 (uncharacterized protein LOC111469521 OS=Cucurbita maxima OX=3661 GN=LOC111469521 PE=4 SV=1)

HSP 1 Score: 394 bits (1011), Expect = 1.60e-136
Identity = 204/231 (88.31%), Postives = 211/231 (91.34%), Query Frame = 0


Query: 50  MSAVEAPRGDSDPANPSSLPFRDARSAAGSCS---DMSVLDDSDDQSWHSVFDSTAWGSH 109
           MSAV APRGD   A+PSSLP+RDARSAAGS S   D+SVLDDSDDQSWHSVFDSTAWGSH
Sbjct: 1   MSAVLAPRGDPILADPSSLPYRDARSAAGSSSSSSDLSVLDDSDDQSWHSVFDSTAWGSH 60

Query: 110 GEGQFSGEIEGVPDAEMGHFISESSSEVDLESGDLEVKVHLGKIERDCRICHLELESSGG 169
           G+G FSGEIEGVPDAE G FIS SSSEVDLESGDLEVKVHLGKIERDCRICHLELES GG
Sbjct: 61  GDGLFSGEIEGVPDAETGGFISGSSSEVDLESGDLEVKVHLGKIERDCRICHLELESGGG 120

Query: 170 RDNSDTPIQLGCCCRGDLGTAHKQCAETWFKIKGNTICEICGATAQNVASQQINEPSNAV 229
           RD +DTPI LGCCCRGDLGTAHK CAETWFKIKGNTICEICGA AQNVASQQINEPSN  
Sbjct: 121 RDYNDTPILLGCCCRGDLGTAHKHCAETWFKIKGNTICEICGAAAQNVASQQINEPSNLA 180

Query: 230 ATAVASSALTAPLTLVETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 277
           A AVASSA+TAPLTL+ETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS
Sbjct: 181 AAAVASSAMTAPLTLIETRTIFHGRRIMNFLLACMLLAFAMSWLFHFKLMS 231

The following BLAST results are available for this feature:

BLAST of Cucsat.G8366 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G8366 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145266.2	4.83e-197	100.00	uncharacterized protein LOC101212160 isoform X1 [Cucumis sativus] >KGN65776.1 hy...	[more]
XP_008457414.1	2.89e-191	98.19	PREDICTED: uncharacterized protein LOC103497107 isoform X1 [Cucumis melo] >KAA00...	[more]
XP_011658411.1	5.93e-159	100.00	uncharacterized protein LOC101212160 isoform X2 [Cucumis sativus]	[more]
XP_008457415.1	1.15e-156	99.12	PREDICTED: uncharacterized protein LOC103497107 isoform X2 [Cucumis melo]	[more]
XP_038895035.1	2.12e-152	96.49	uncharacterized protein LOC120083374 [Benincasa hispida] >XP_038895036.1 unchara...	[more]

BLAST of Cucsat.G8366 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0P0	2.34e-197	100.00	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G52792...	[more]
A0A5D3BFF6	1.40e-191	98.19	E3 ubiquitin-protein ligase MARCH1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C6R6	1.40e-191	98.19	uncharacterized protein LOC103497107 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3C517	5.55e-157	99.12	uncharacterized protein LOC103497107 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1I103	1.60e-136	88.31	uncharacterized protein LOC111469521 OS=Cucurbita maxima OX=3661 GN=LOC111469521...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 104..159 e-value: 2.6E-15 score: 66.8
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 105..158 e-value: 1.0E-9 score: 38.3
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 97..165 score: 19.093723
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 95..170 e-value: 3.9E-15 score: 57.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	PANTHER	PTHR46214	ZINC FINGER, RING-CH-TYPE	coord: 34..226
None	No IPR available	PANTHER	PTHR46214:SF5	OS01G0850200 PROTEIN	coord: 34..226
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 105..159 e-value: 1.87019E-12 score: 58.1076
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 102..162

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G8366.T1	Cucsat.G8366.T1	mRNA
Cucsat.G8366.T2	Cucsat.G8366.T2	mRNA
Cucsat.G8366.T3	Cucsat.G8366.T3	mRNA
Cucsat.G8366.T4	Cucsat.G8366.T4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding