Cucsat.G8278 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G8278
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	NAP1-related protein 2
Location	ctg1557: 4105588 .. 4111552 (+)
RNA-Seq Expression	Cucsat.G8278
Synteny	Cucsat.G8278

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGATGAAGATTGAATGTTGAATGGAGTAAGTGATATAAGCAAAATGTTAGCTTAGTTGGAGGATAAGTGATTGTGACTTAAGATAGTGTGTTCATCGTTGGTGCGTACGAATAGAGAGAGAGAGAGAGAGCAACTACCGTTTCCTCGTTAAGCCCATTTCAGTTTCTTTTTCTTTTTTTTCTCTTTTTCCCCCCGAAAAACTAAACATATTTATATTCCCTTCGCTTTCTCTTTCAACTTACCGTCTTTTCCCTCCCAAAACTAGGTTTCCGCCTCTAAAATGGTCGCCGATAAGCCTAAAAAATCCAAGCCCTCCGACGAACCTGACCACATTGACGTCGAGCTTGTCCATTTCATCGAGAAGTTACAGGAGGTTCAAGACGAACTCGAGAAGGTCACCCTCTCTCTCTCCCTTTACTTTCTGCATCCATTTTTCTCCTATCCTATCATTCTAAATTTGCGTTTTCTCCACTTTAATTCTCTACATCAACTTTCATGTTAGCTCAATTATGTTAGGTAGATGTTTTTTTTCCACCTTGCTTCTTTAGCTTCTTTTTTTTAAAAAAAAAAAAAAAATTATTATTACCATACGGATGGAATTGTGCGATTAGGGCTAGTTTTCTTGGTTTATGATTCTTGTTTGGAATGAGGGTGGTTTAGGCGGTCTGAACTGTACTTGTGTTAAATTGACGCCAGTCCTGGTTTTTATAACGTGTCAAGTCTTAATCTAAATTCTCTGAGCAGAAAGTGTTAGGTTATGATTCATTTGAACAATTCTATAGGTCTTTATCCTACAATTTGATGCTTTTATGTTAATTAGGGATGCCCATTGTCATGGGCAACTAATTTGTTTTGGAAGGAAAATAATTTTGTTTCTTTTTTACTAGCATTTGTAGTTAGAATGTATCTCTCAGTCTTTTAAAGCTCAAGGAAGTCACGAGAGAAAAGAAGTGTGGTTTTTTTAAATTCTTATTATGAGGTTTGCAAAAGAAAATGTAAAAAGTTATATATATATATGACGGAGATTCGTACTGGTAAATAATAAGGTGACGAAAGGCTTAAAATAATTAGATACCCATTCCTATTTGAAAATGAAAGAATTTTCATGCGTTTCTTTCTTAAAAATTAGATTTTTATTTAAAAGAGGGGCAGCGAGTTAGACTCAAGGCTCTAAAGCATGCCTCACAGGTTCTAATGCTTGCGCCTCAAGTGGGGTAAGGAAGCCTCGCCTTTTGAAGTGATGTGCAGAGGCCCGACCTTGGACCTAAGCATGCCTAGGCACACGACTCAGTGGTCTTTCTAAAACACTGTGAGACACATCTTTATTTCAGTCGTATGATGTTTGCAATGTTCGTAAGTAGGTTTACCCTGTCCCACCTTGTTTTTTTGTTTTTGTTTTGTGAAGGAGTGGTATGAGGTTTTAGTTTTTTCTTTATTACATAGCTAGAATTTTCCTTTTGGCAATTTTTTTTTATCTTTTATGCTGAACAAATGATTTATATGATTCCCAAGTTCAATAGAAGTTCTTTTCCATTCAAGATTTTAAGGAGTTCATTATTGGGTCAAATGATCTGAGTTCTTGTTCTAGGCATCTAAAAATGAGTATAAATCTAGGACTTGGTAGGCAATTTGTACTAGATATTCATCACCATGGCCATGTTCTGCCAATATTTGATTTAATGCAATTTCTTATACATCATTCTACTCAATATCTAATAAGTAGACTTGTACTTAGCCTTGATCCTTTGGCATCCCACAGGTTAATGAAGAAGCAGGTGACAAAGTTTTGGAAGTTGAACAGAAATATAATGAGATAAGGCAGCCTGTCTATGTGAAACGGAATGAAGTTATCAAAACTATTCCAGACTTTTGGTTAACTGCTGTTAGTGCTCTGTTTATTATTGGCATTTTATTTGTGCAACTATTTATTATAATTTGTTTACTTTTCTTTACCCCTTTGATGTACATGACCAATGCTTGATTTTTGCAGTTCTTGAGTCATCCTGCACTTTGTGATCTTTTGACTGAAGAAGATCAGAAGGTATTTTGCTTTAATCTATTTGATTTCTAATTGTGGGTTGAATGAAAAATCGATATTTCTGCAAGTTTTTTATACTCAATTTACATTGAAATCCTAATTTAAAGAGACTTTTGATGTTGTACTAATAAAATGTGTGCAAGTATGTACTCTTAACATTTGTCTGTTGGTCTCTTATTCTTGACACAGATCTTTAGGCATTTAGATTCTCTTGGAGTGGAGGATCAAAAGGATGTAAAGATGGGCTATTCCATCATGTTTGTAAGCTTCAGCTAACTTGTTTGATTTATAATGTGTCTGCCCATTTTCATCATTCATATGCTACTTTTTTTGGCCTATTTGGTATCTTCCTTCAATTGCAGAATGTGATAATGATCTGTCACTGAACTCCTTAAAATTACAGAGTTTCAATGAGAACCCTTATTTTGAAGATAGAAAGCTAGAGAAGACATATACATTCTTTGAAGATGGGGCAATTAAAATTACTGGAACAACAATCAAGTGGAAGGATGGCTCGGTAACTGTTATTTCTATCAAAATAATGATTCCAATTGTTTGTTTGATCAAATTAATGACCGATGGTGATCTTTATAGGGTGCCTCAAACGGAGTTAATGGTGAGAAGAAAGGGAAGAAACGACCGCTGGCTGAAGACAGGTGCTTCCTTACCCCTTCCTTTTTTATTCCATCCATCTTGAACAAAGTCACAGGACCTGAAGGTTTGACAATGACCTGGGTACCTCTAGCGAAACAGTGCTTGAAATTCCCTTAATTGAAACTGTAAACGTTTAACACATTTAAAACGTGCTGCCCTTTCAACTAATGCTTTACCTTCTTCAATTGTGTGGTAAAGATTCACTAATGATGGTTAATAAGCCAACAATTATGATTAATTTTGAAAAATAATCTCTTCAGCTCAACCGCAGGGCTAAGCAGAAAGATGTGAAAAGGGTGGTGTACCATTTAGTTTTCTTATACATTTCTGATTTAATGTTAACCTAAAAAGTTTCAAAACTTAGTTTCATTCAAGTCTCTCTCTATATACTATTTAATAATTGGTCATCTATCAATTCTATGTTTGAAGGGGTTCAATGGCTTCACCTCTTCTGTAATGTCATTTACCGTCTTTGATTCGTGGACCCTAAGAGAGTTGTCTGCTCAAATTACCATCCATGTATAATCAATACTAGATCTGACCAGTTGCCCACCCTACCTACTCTTGTTCTTATCGTACATCATCTTTGCCTCTGCTTCGTAGAATCTTTCAGTGGCATGTTTCAGTCTTCTTTCCCGTTGCTTCGATAAAGTGAGCTATGATTCAAGTACAAGATTCTATCATTACCGCCTCAATCATTAGACATCCAACCTATATTGCAATGACCCAACTACAGGAGTGGAGATCCACTAAGTATCTACTCGAGTCTAGTGGGGCTTGCATCAAGGAGTTTAGATTCGTCTTCTATACTACTGTTCTATTCCTCGATTTTTCTTTACCTAAGAAGGGGAGCTTGTGGGAGAATCTAAATTCAGTTCATTGATTCTATTTTTTTATGAACACAATACACAATAACCTCTTTTAAAAAAAAGGTTATTAGAAATTTGTTTGATACATTGAGAGCCAAAAACCAATTAGGTATCAAATGAAGAGTTATATTTTTAACTAGAAATTGATCCTTTAAAAAATAGAATAATACCACGAAAAATTTTAATGTACCATTTTATTAAAAAAAATTGTTTTATTCTTGACAGGTGCAATGAATTATTCAATGCACCGAAAGAAAATTATTCAAAGCTACAATAGATGAATAGTCTTCTGGCCACTAGTGTAGAATAGTATCATTTAAGAATTTTTAAATCCGTGTATTCAACATAAAGTTTAATTAGTATATTAAAAGATATTCAAGGAAGAAACTTTTGGTTTTCCAATACGTGCTGGTGTTATGCTTTACTGTTGAGCTGTTACTCAACTTCAATGATTTATTCTTTCATATCCTCAATGAAACCGATCAAAAAATATTGATGTTTAGCATATTTATTTTCTATTGTTCATCACAATATTGATGTATGCAGCTTCTTCAGTTGGTTTGGTGAAACCGATCAAAAAGATATCACTGAGCTTCATGATGAAGTAAGTCTGAACATCTTTCTGCCCCATAATAATATAAACGTTTGGCTTGTAAATGCAACAATGTCTTGTCTATTAGCTTTTTTGGTTTGTACTTACGTGCTTGGTTTCTTGACTTAAATGCAGGTTGCTGAGATAATTAAAGAGGACCTATGGCCCAATCCTTTGAAATATTTCAACAATGTAATCTCCTTCGTCTTTGTTTTATATTTCTTTACCTATTCTTTGAACCCATTCATTTTATTTTTCAGTTGTTCAGCTTGTGGAGACACCCCCTGTTCCATTAATCTAAGTTGCCATTTATTTTTTCCTGCTCCTTACCCCACTTTGAAGTCTGGAATACCAATCCTTTTATCATGGTGACTAAGGGACGCATCATAACAAATGTGACTCTAAGAAAGTTAGTAGTGGCAGTTTCCACGGTCCTTGTACATGAATGGCTCTATTTTTTTTCCTTTGTTCACTATGCCTCTGTTGGGAACATCTCCCAGCTCTCATGTTTGTTTTTAGGAGAATAGTTGGATTGGGGAGGCCTCATTATTGGTTCCTTGTGCCTAGTTGTCCTTGTTTCCATCTTTGTGCTTCTGTTGCTTTCCCCTTCTATTAATTTTCTCACAAAGCTTGACTAGAGAAATCTTTCACGACGATAGATGGCCAAGAAGGTGAGATTCATTGAGAAGACTTGGTGTCTACCTTCTACCCTAGTGTTGCATTCTTTGACAGGCGAATACATTTGTCAGATGAAATGTATTCTCCTTGAAAAGGTGTAGCAGTTTGGAAATAGCCCATCTATTTTTGTACCTTCTCTACCCTTGTGATGTGTTGCATTCGTTGGTACTCAGAATCCAACACAGAATCTATATAATAGTCTTTAGATCTTTATTGCTACTGCTGAATTTCAAATTACAGAAATCGAATCGAATTGAGTATTCGATTGTTACAAACTCTCCCTCACCAATCTGTTACCCTATCTCTCAAGGATGCACAGAACTGATTTACAATATCAAAACTAACTTTCCCTCCCAACTTATTTACAATATGACTCCCTTCTTCCTTATGATCCTCACATTCGGTTATGTATCAGCTAACTTCCTTATGCCTTATTCTTCGATGAATTATAGGAGGTCTAACACATTCCTGTTTTGGGAATTTTGTTTGAGATTGCAATGTTGTGAATTTTCACTGCTTTTTTTTTATTACTACTTTTTCATTGTTTCTGGATGTTTCTCTTTCAATCGTATACATAGTCGTACTTTGGGCTCTTCTTAGGGTTGTCTTTTGTTTTTTAATGGAAGTCTTAGTTTTTGCTAGCAAGAAAAATGAGGTTTCTTCTAATTTCTTTTCAGGATATTGATGAAGACGAAGAGGACTCTGATGGGGAAGATGATGAGGTAAACAAGATTAGATTTCACGTTCACCATTGCACTCATTAATGTTCTTTTGGGTCTGTCTCCTGCTCTCTTCCCATTCATGAATCACATACATCTTTTTGACAATCATTCCTGAGCCTTCATCTAGTTAACTAGAAGTGATGGGAAATAGTTAAAAGCTTCTAAATCTGTTCATTGTGGAAGTATTGTACTTGATCGAAGTCTAATGTTTTGCAACTTCATTGTTGCTTAAAACTGCTCTGTACATATAGCCTATCTACAAGATCAAAAGTAATTGTTCAAACTTTTTGATGACGCATGTATAGGAAAATGGAGACGAAGACGACGATGAAGCCGAAGAGTGAAACGTAGAGGACAAACCCATTTTAGACACCCCTCCTTAGGTACCTTTTTTGCCTCCTTCCTTATTACGGTTAACATAGGATACAATTGTTCCAATCTGTGATACTTGTTGAAGTACTGCTGCCATATTTATACATCAATGTTCTATTTATCTTCTAGGCTATTTTGGCCTCCCCATATCATTTAATACACAGCTCAATCATTTCATGATATCTTTTTCATTTCACATAATATTGTTGCTGGAAAAGGACTCATCACGAAACTGTATGTAGTTGGCCCAGTGGTCAGTAAGTTATGGTGGTTGTCTTTACTAGTATAGTCGAGGTACAAACAAGTTAACACTCGGATATTTAGAAAAGATCTGACATCGTTATTACATGGTCTCATTTAAAATTCAAAAGGAGTTATGGATAAACCACTCTTAATCTGTTCATGAACTGATTTGATCTT

Coding sequence (CDS)

ATGGTCGCCGATAAGCCTAAAAAATCCAAGCCCTCCGACGAACCTGACCACATTGACGTCGAGCTTGTCCATTTCATCGAGAAGTTACAGGAGGTTCAAGACGAACTCGAGAAGGTTAATGAAGAAGCAGGTGACAAAGTTTTGGAAGTTGAACAGAAATATAATGAGATAAGGCAGCCTGTCTATGTGAAACGGAATGAAGTTATCAAAACTATTCCAGACTTTTGGTTAACTGCTTTCTTGAGTCATCCTGCACTTTGTGATCTTTTGACTGAAGAAGATCAGAAGATCTTTAGGCATTTAGATTCTCTTGGAGTGGAGGATCAAAAGGATGTAAAGATGGGCTATTCCATCATGTTTAGTTTCAATGAGAACCCTTATTTTGAAGATAGAAAGCTAGAGAAGACATATACATTCTTTGAAGATGGGGCAATTAAAATTACTGGAACAACAATCAAGTGGAAGGATGGCTCGGGTGCCTCAAACGGAGTTAATGGTGAGAAGAAAGGGAAGAAACGACCGCTGGCTGAAGACAGCTTCTTCAGTTGGTTTGGTGAAACCGATCAAAAAGATATCACTGAGCTTCATGATGAAGTTGCTGAGATAATTAAAGAGGACCTATGGCCCAATCCTTTGAAATATTTCAACAATGATATTGATGAAGACGAAGAGGACTCTGATGGGGAAGATGATGAGGAAAATGGAGACGAAGACGACGATGAAGCCGAAGAGTGA

Protein sequence

MVADKPKKSKPSDEPDHIDVELVHFIEKLQEVQDELEKVNEEAGDKVLEVEQKYNEIRQPVYVKRNEVIKTIPDFWLTAFLSHPALCDLLTEEDQKIFRHLDSLGVEDQKDVKMGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKRPLAEDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDEENGDEDDDEAEE

Homology

[Close]

BLAST of Cucsat.G8278 vs. ExPASy Swiss-Prot
Match: Q8LC68 (NAP1-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=NRP2 PE=1 SV=2)

HSP 1 Score: 149.1 bits (375), Expect = 3.6e-35
Identity = 81/134 (60.45%), Postives = 100/134 (74.63%), Query Frame = 0


Query: 2   GYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKRP 61
           GYSI FSFN NP+FED KL KT+TF E+G  KIT T IKWK+G G +NGVN EK G KR 
Sbjct: 116 GYSITFSFNPNPFFEDGKLTKTFTFLEEGTTKITATPIKWKEGKGLANGVNHEKNGNKRA 175

Query: 62  LAEDSFFSWFGETDQKDIT--ELHDEVAEIIKEDLWPNPLKYFNNDIDED--EEDSDGED 121
           L E+SFF+WF +   K+    E+ DEVA+IIKEDLWPNPL YFNND DE+  + D DG++
Sbjct: 176 LPEESFFTWFSDAQHKEDVEDEMQDEVADIIKEDLWPNPLTYFNNDADEEDFDGDDDGDE 235

Query: 122 DEENGDEDDDEAEE 132
           +E+ GD D+D+ EE
Sbjct: 236 EEKEGDSDEDDDEE 249

[Close]

BLAST of Cucsat.G8278 vs. ExPASy Swiss-Prot
Match: Q9CA59 (NAP1-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=NRP1 PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.5e-33
Identity = 80/133 (60.15%), Postives = 96/133 (72.18%), Query Frame = 0


Query: 2   GYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVN-GEKKGKKR 61
           GYSI F F  NP+FED KL KT+TF E+G  KIT T IKWK+G G  NGVN  +KKG KR
Sbjct: 120 GYSITFHFTSNPFFEDAKLTKTFTFLEEGTTKITATPIKWKEGKGLPNGVNHDDKKGNKR 179

Query: 62  PLAEDSFFSWFGETDQKDIT--ELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDD 121
            L E+SFF+WF +   K+    E+HDEVA+IIKEDLW NPL YFNND DE++ D D + D
Sbjct: 180 ALPEESFFTWFTDAQHKEDAGDEIHDEVADIIKEDLWSNPLTYFNNDADEEDFDGDDDGD 239

Query: 122 EENGDEDDDEAEE 132
           EE  ++DDDE EE
Sbjct: 240 EEGEEDDDDEEEE 252

[Close]

BLAST of Cucsat.G8278 vs. ExPASy Swiss-Prot
Match: Q69JW2 (NAP1-related protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0576700 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 4.1e-31
Identity = 75/129 (58.14%), Postives = 97/129 (75.19%), Query Frame = 0


Query: 2   GYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKRP 61
           GYSI  +F+ENPYFED++L KTY F +DG   I  T+IKWK+G   +NG N +KKG KRP
Sbjct: 123 GYSITLTFSENPYFEDKELTKTYAFADDGTTTINATSIKWKEGMEIANG-NAKKKGSKRP 182

Query: 62  LAEDSFFSWFGETDQKDITE-LHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGE-DDE 121
           L E+SFF+WF +T+ K + + + DEVAEIIKEDLWPNPLKYFNN+ +E  ED D E  D 
Sbjct: 183 LVEESFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYFNNEAEELGEDDDEEGSDA 242

Query: 122 ENGDEDDDE 129
           + G+ED++E
Sbjct: 243 DEGEEDEEE 250

[Close]

BLAST of Cucsat.G8278 vs. ExPASy Swiss-Prot
Match: B8AEC1 (NAP1-related protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07785 PE=2 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 7.0e-31
Identity = 75/129 (58.14%), Postives = 96/129 (74.42%), Query Frame = 0


Query: 2   GYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKRP 61
           GYSI  +F+ENPYFED++L KTY F +DG   I  T IKWK+G   +NG N +KKG KRP
Sbjct: 123 GYSITLTFSENPYFEDKELTKTYAFADDGTTTINATCIKWKEGMEIANG-NAKKKGSKRP 182

Query: 62  LAEDSFFSWFGETDQKDITE-LHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGE-DDE 121
           L E+SFF+WF +T+ K + + + DEVAEIIKEDLWPNPLKYFNN+ +E  ED D E  D 
Sbjct: 183 LVEESFFTWFTDTEHKSLADGVQDEVAEIIKEDLWPNPLKYFNNEAEELGEDDDEEGSDA 242

Query: 122 ENGDEDDDE 129
           + G+ED++E
Sbjct: 243 DEGEEDEEE 250

[Close]

BLAST of Cucsat.G8278 vs. ExPASy Swiss-Prot
Match: A2XU85 (NAP1-related protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=H0219H12.3 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.5e-25
Identity = 71/138 (51.45%), Postives = 91/138 (65.94%), Query Frame = 0


Query: 2   GYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKRP 61
           GYSI  +F+ NPYFED KL KTY+F +D A+K+  T+I+WK G   +N     KKG KR 
Sbjct: 118 GYSITLTFSPNPYFEDTKLTKTYSFSDDEAVKVKATSIRWKKGMDIANDRAYTKKGDKRI 177

Query: 62  LAEDSFFSWFGETDQKDITE-LHDEVAEIIKEDLWPNPLKYFNND-------IDEDEEDS 121
           L ++SFF+WF     +       DEVA++IKEDLWPNPLKYFNN+       +D+D+E S
Sbjct: 178 LIDESFFTWFNSEKNRSFAHGAMDEVADVIKEDLWPNPLKYFNNEFEEELELLDDDDEVS 237

Query: 122 DGEDDEENGDEDDDEAEE 132
           D +DDEE  DED  E EE
Sbjct: 238 D-DDDEEEDDEDQGEGEE 254

[Close]

BLAST of Cucsat.G8278 vs. NCBI nr
Match: XP_004148692.1 (NAP1-related protein 2 [Cucumis sativus] >KGN52453.1 hypothetical protein Csa_009428 [Cucumis sativus])

HSP 1 Score: 253 bits (646), Expect = 5.56e-83
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR 60
           MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR
Sbjct: 114 MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR 173

Query: 61  PLAEDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDEE 120
           PLAEDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDEE
Sbjct: 174 PLAEDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDEE 233

Query: 121 NGDEDDDEAEE 131
           NGDEDDDEAEE
Sbjct: 234 NGDEDDDEAEE 244

[Close]

BLAST of Cucsat.G8278 vs. NCBI nr
Match: TYK15259.1 (NAP1-related protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 238 bits (608), Expect = 7.69e-77
Identity = 119/121 (98.35%), Postives = 119/121 (98.35%), Query Frame = 0


Query: 1   MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR 60
           MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR
Sbjct: 119 MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR 178

Query: 61  PLAEDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDEE 120
           PL EDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDE 
Sbjct: 179 PLTEDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDEV 238

[Close]

BLAST of Cucsat.G8278 vs. NCBI nr
Match: KAA0039505.1 (NAP1-related protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 235 bits (599), Expect = 7.79e-76
Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 1   MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR 60
           MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR
Sbjct: 119 MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR 178

Query: 61  PLAEDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDE 119
            L EDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDE
Sbjct: 179 SLTEDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDE 237

[Close]

BLAST of Cucsat.G8278 vs. NCBI nr
Match: XP_038889153.1 (NAP1-related protein 2-like [Benincasa hispida])

HSP 1 Score: 233 bits (594), Expect = 5.44e-75
Identity = 119/128 (92.97%), Postives = 124/128 (96.88%), Query Frame = 0


Query: 1   MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR 60
           MGYSIMF+FNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR
Sbjct: 119 MGYSIMFNFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR 178

Query: 61  PLAEDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDEE 120
           PLAEDSFFSWFGET+QKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDE++    +DEE
Sbjct: 179 PLAEDSFFSWFGETEQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEDNDSEAEDEE 238

Query: 121 NGDEDDDE 128
           NGDEDDDE
Sbjct: 239 NGDEDDDE 246

[Close]

BLAST of Cucsat.G8278 vs. NCBI nr
Match: XP_022134471.1 (NAP1-related protein 2-like [Momordica charantia])

HSP 1 Score: 232 bits (592), Expect = 1.09e-74
Identity = 119/129 (92.25%), Postives = 126/129 (97.67%), Query Frame = 0


Query: 1   MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR 60
           MGYSI+F+FNENP+FEDR+LEKTYTFFEDGAIKITGTTIKWKDGSG SNGVNGEKKGKKR
Sbjct: 119 MGYSIIFNFNENPHFEDRRLEKTYTFFEDGAIKITGTTIKWKDGSGTSNGVNGEKKGKKR 178

Query: 61  PLAEDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDD-- 120
           PLAEDSFFSWFGET+QKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGED+  
Sbjct: 179 PLAEDSFFSWFGETEQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDEDE 238

Query: 121 EENGDEDDD 127
           EENGD+DDD
Sbjct: 239 EENGDDDDD 247

[Close]

BLAST of Cucsat.G8278 vs. ExPASy TrEMBL
Match: A0A0A0KS97 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636460 PE=3 SV=1)

HSP 1 Score: 253 bits (646), Expect = 2.69e-83
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR 60
           MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR
Sbjct: 114 MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR 173

Query: 61  PLAEDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDEE 120
           PLAEDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDEE
Sbjct: 174 PLAEDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDEE 233

Query: 121 NGDEDDDEAEE 131
           NGDEDDDEAEE
Sbjct: 234 NGDEDDDEAEE 244

[Close]

BLAST of Cucsat.G8278 vs. ExPASy TrEMBL
Match: A0A5D3CYM0 (NAP1-related protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00340 PE=3 SV=1)

HSP 1 Score: 238 bits (608), Expect = 3.72e-77
Identity = 119/121 (98.35%), Postives = 119/121 (98.35%), Query Frame = 0


Query: 1   MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR 60
           MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR
Sbjct: 119 MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR 178

Query: 61  PLAEDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDEE 120
           PL EDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDE 
Sbjct: 179 PLTEDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDEV 238

[Close]

BLAST of Cucsat.G8278 vs. ExPASy TrEMBL
Match: A0A5A7TDJ7 (NAP1-related protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G003260 PE=3 SV=1)

HSP 1 Score: 235 bits (599), Expect = 3.77e-76
Identity = 117/119 (98.32%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 1   MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR 60
           MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR
Sbjct: 119 MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR 178

Query: 61  PLAEDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDE 119
            L EDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDE
Sbjct: 179 SLTEDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDE 237

[Close]

BLAST of Cucsat.G8278 vs. ExPASy TrEMBL
Match: A0A6J1BXW0 (NAP1-related protein 2-like OS=Momordica charantia OX=3673 GN=LOC111006708 PE=3 SV=1)

HSP 1 Score: 232 bits (592), Expect = 5.30e-75
Identity = 119/129 (92.25%), Postives = 126/129 (97.67%), Query Frame = 0


Query: 1   MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR 60
           MGYSI+F+FNENP+FEDR+LEKTYTFFEDGAIKITGTTIKWKDGSG SNGVNGEKKGKKR
Sbjct: 119 MGYSIIFNFNENPHFEDRRLEKTYTFFEDGAIKITGTTIKWKDGSGTSNGVNGEKKGKKR 178

Query: 61  PLAEDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDD-- 120
           PLAEDSFFSWFGET+QKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGED+  
Sbjct: 179 PLAEDSFFSWFGETEQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDEDE 238

Query: 121 EENGDEDDD 127
           EENGD+DDD
Sbjct: 239 EENGDDDDD 247

[Close]

BLAST of Cucsat.G8278 vs. ExPASy TrEMBL
Match: A0A6J1JTH3 (NAP1-related protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111489586 PE=3 SV=1)

HSP 1 Score: 229 bits (583), Expect = 1.23e-73
Identity = 120/132 (90.91%), Postives = 126/132 (95.45%), Query Frame = 0


Query: 1   MGYSIMFSFNENPYFEDRKLEKTYTFFEDGAIKITGTTIKWKDGSGASNGVNGEKKGKKR 60
           MGYSI+F+FNENPYFEDRKLEKTYTFFEDGAIKITGTTI WKDG GASNGVN EKKGKKR
Sbjct: 119 MGYSIIFNFNENPYFEDRKLEKTYTFFEDGAIKITGTTILWKDGLGASNGVNSEKKGKKR 178

Query: 61  PLAEDSFFSWFGETDQKDITELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEDSDGEDDEE 120
           PLAEDSFFSWFGET+QKDI ELHDEVAEIIKEDLWPNPLKYFNNDIDEDEE+SDGED+EE
Sbjct: 179 PLAEDSFFSWFGETEQKDIMELHDEVAEIIKEDLWPNPLKYFNNDIDEDEEESDGEDEEE 238

Query: 121 -NGDEDDDEAEE 131
            NGDEDDD+ EE
Sbjct: 239 ENGDEDDDDGEE 250

The following BLAST results are available for this feature:

BLAST of Cucsat.G8278 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LC68	3.6e-35	60.45	NAP1-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=NRP2 PE=1 SV=2	[more]
Q9CA59	1.5e-33	60.15	NAP1-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=NRP1 PE=1 SV=1	[more]
Q69JW2	4.1e-31	58.14	NAP1-related protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0576700 ...	[more]
B8AEC1	7.0e-31	58.14	NAP1-related protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07785 PE=2 ...	[more]
A2XU85	1.5e-25	51.45	NAP1-related protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=H0219H12.3 PE=3...	[more]

BLAST of Cucsat.G8278 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148692.1	5.56e-83	100.00	NAP1-related protein 2 [Cucumis sativus] >KGN52453.1 hypothetical protein Csa_00...	[more]
TYK15259.1	7.69e-77	98.35	NAP1-related protein 2 [Cucumis melo var. makuwa]	[more]
KAA0039505.1	7.79e-76	98.32	NAP1-related protein 2 [Cucumis melo var. makuwa]	[more]
XP_038889153.1	5.44e-75	92.97	NAP1-related protein 2-like [Benincasa hispida]	[more]
XP_022134471.1	1.09e-74	92.25	NAP1-related protein 2-like [Momordica charantia]	[more]

BLAST of Cucsat.G8278 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KS97	2.69e-83	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G636460 PE=3 SV=1	[more]
A0A5D3CYM0	3.72e-77	98.35	NAP1-related protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold8...	[more]
A0A5A7TDJ7	3.77e-76	98.32	NAP1-related protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6...	[more]
A0A6J1BXW0	5.30e-75	92.25	NAP1-related protein 2-like OS=Momordica charantia OX=3673 GN=LOC111006708 PE=3 ...	[more]
A0A6J1JTH3	1.23e-73	90.91	NAP1-related protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111489586 PE=3 SV=...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 43..74
None	No IPR available	GENE3D	3.30.1120.90	Nucleosome assembly protein	coord: 94..240 e-value: 5.4E-47 score: 161.4
None	No IPR available	GENE3D	1.20.5.1500		coord: 17..93 e-value: 1.6E-25 score: 91.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 239..265
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 232..265
None	No IPR available	PANTHER	PTHR11875:SF126	NAP1-RELATED PROTEIN 2	coord: 23..264
IPR002164	Nucleosome assembly protein (NAP)	PFAM	PF00956	NAP	coord: 91..237 e-value: 4.1E-28 score: 98.3
IPR002164	Nucleosome assembly protein (NAP)	PANTHER	PTHR11875	TESTIS-SPECIFIC Y-ENCODED PROTEIN	coord: 23..264
IPR037231	NAP-like superfamily	SUPERFAMILY	143113	NAP-like	coord: 30..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G8278.T1	Cucsat.G8278.T1	mRNA
Cucsat.G8278.T3	Cucsat.G8278.T3	mRNA
Cucsat.G8278.T5	Cucsat.G8278.T5	mRNA
Cucsat.G8278.T4	Cucsat.G8278.T4	mRNA
Cucsat.G8278.T2	Cucsat.G8278.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000724	double-strand break repair via homologous recombination
biological_process	GO:0006334	nucleosome assembly
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0042393	histone binding