Cucsat.G8127 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G8127
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	PMR5N domain-containing protein
Location	ctg1557: 813439 .. 818287 (+)
RNA-Seq Expression	Cucsat.G8127
Synteny	Cucsat.G8127

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTAATGGCAATTGCATTAATTTTATTTTGGGTGTAAGAGAGAGATAGAAAGAAAGGAGAGAAGAACAAAGCAAAGAACATGTGCCTTTCATTTACTTGTTTCCTTCCCTTTTCACCAAAAGCCAATTTCAATCCAACCCCACACAAGCAATTCCCCAATTCCAAAACAGCATGTACACAGTTTTCCCCCATTGAAATTCCAAAACCCCATTTCCCCCTTCTTCACCCTCTGCAGTCTGCATCATTATCTCTCTCCCTCCCTCTCTTCAATGGCCTAATTCCTTCACACCCATTTCCCCATTTTCCATCTCCCCTTTTCATTCTCAAACATTTTCACACTTGACCATCTCCACTCTTTCACTCTTCAATGGGGTTTTTGGGATTTTGGCCTTGTTTGGCAGCATTGTTTTTCATTTCTCTTCATACCCATTTAGCTTCCTCAGCTTTGATTCTCAGTTTGAAGCACCATTACCGGAACAGCGACCACCATAATCGCCGCCCAATGCTTCAAGCTAACCAAACCGGCTGTGCTCTGTTCGCCGGAACTTGGGTTCGAGATGATTCATATCCACTTTACCAAGCTTCTAACTGTCCATTTATCGATCCTGAGTTCAACTGCCAAGCTTACGGCAGACCCGATTCAAATTACCTCAAGTACCGTTGGCAGCCGCTCGATTGTGAGCTCCCAAGGTCAGGAATCGAAAACCCCTCTTTATGAAATTTATCTTTGATGGGTTTTTTTTGCTTCTTTTTTCTTTGCATTTACATTTTGATAAATCTTGCTGTAGCGTTTTCCATTAAAGGTTCGATGGGGCTGAGTTTTTGATGAGAATGAGAGGAAGAACTGTGATGTTTGTTGGTGATTCATTGGGGAGAAACCAATGGGAGTCATTGATTTGTTTGATCGTGTCATCTTCTCCTCAAACTCCTACTCAAATGACTAGAGGAGAACCTCTTTCAACCTTCAGATTCCTGGTGAGTAGCAACTTTAAACCTTCAGATTTTGTTTTGAAACAATGCTTAAACTCATAGATCTCTGGTGGGTTTTTGACAGTTTAGGATTAGAACTCAGAATGTTGATAGATTAAACTTTTTGCAGGAATATGAGTTAACTGTGTCCTATTACAAAGCCCCGTATCTTGTGGACATAGAGATAGAGAATGGGAAGAGAGTGTTGAAGCTGGAGGAGATATCAATGAATGGAAATGCTTGGGTTGGAGCTGATGTTATTTCCTTCAACACTGGACATTGGTGGAGCCACACTGGCTCTCTACAAGGGTTTGTTATGAAACTTGAAATCTTGATGATGAAGATGATTAATCTGTGCTATTTGCAAAATATATCCCTAATCTTTACCTTTTTTTGAAAAATATCCTTACATACTACTCGGGACCTGCAATGGATGAAAACATCGTTTCAGGTCTTAAAATCTTTGTCCAACGTTTTAAAGGATCTCAAGGCTCTCTACCATGGTTTTTTATGAAACTTGATATGTTGATGAAGAAGATGATTAATGTGGGCTAATTTACAAAATATACCTCTAATCTTTACCTTTTGTTTAAAAAAGATCCCTACATACTACTCAGGACCTGCAACATGCGTTTCACACTGTTTCATGTCCTAAAGTTTTTTTCCAACGTTTTTAATGGATTTCAAAGCTCTCTGCTAGCGTTTGTCATGAAAATTGATATCTCGATGAAGAAGAAGTTTAATGTGGGCTAATTTGCAAAATATACCCTTAATAACCTTTACCTTTTGTTTAAAAAATACTCTTTCATACTACTCGGGACCAACAACAGATGTTTGACACTGTTTTAGTTTGTTCAACGTTTTAATGGATACTGTTAGAACTTTCAAAAGAATACAGGTATTTTTGGAATAAATGTCGAATTTGAGATTTTACTTTTAGTTTAGCCATTGATGTAATGTGATGAAGGGTGTGGATTGTTTGTTTTAGGTGGGATTACATGGAATCAGGAGGATCATACTATCAAGACATGGATCGGTTGGGTGCAATGGAAAAGGCTTTAAGAACATGGGCTGATTGGGTTGAGAAGAACATTGATGTCTCTAGAACAAGGGTTTTCTTCCAAGCTATCTCCCCCACACATTACAAGTAAGTCTCTTAGTGATAATGCTTTAGATCTATGAAATAAAATAATATAATATCTAATAACGCGTCTGAATAACAAAAAGAAAAAAAAAATGTATACTGTCTTGTGCCTTTATAGCTTAGGTAATTATTGAATGTTGGTTTGGTCTGCCAATGGCACCAAGCACCAGAAATCCTTTTCTCAATGCCCATTTGGGCTCTCTGTCTTTCTTTTGTTTATTCCTTCAGCTCTCATTGTAGGCATTTTAGATATTTTTAATGTCAAATTACCATTTTAGCCCTTTTAAGTTTATTTTATAAATTTGGTCAACGTACTCCCAAAAGTGTTGTGTTGGTTATTTAAGGGTGAGTTTTGGCAGTGACATCAAAATAGAAATTTGAAATTAAGGAATTATAAGATATTGTATCATAGTTTTAGTGTTTTTAGATATATTTGTTTAATTTAGATTTTTCAGTTAGATGCCAATTTAAAGTAATGTGTGTATAAAAATATATTTATTTGATGTTCATTATTTTACAATATCATATAATATAAAATTATAGGTAAATACTTCGTGAAATTGCAAAATCCGCGTCTAAAGTGTGATGAGAGTTGCAATTATAAAAATTGGACCTTTAAACTTACTCAAGTGTTAAAATTGAGTCAAATTGCATCTTCAATTTTATCATTTATAGGTCCAAGTCCAATTTTTATAATTATTATAAGGTTAAGGCTCTAATTTCAACATTGGTAGAATTTGAGAGGCCTACTTTTACAGGGTCTAATTGCAACTATCATTATACTAGCGGTTTTCATAAGGGTCATTTTCAAAATAGCAAAATAAATTAAAATATTTACGAGCTATAACAAAATTTTTGGATTCTATTATTGACAGTTTGCGATATCTTTCTATCATTAGGTATCAGATGTTTGTTATTAATAGAATCTAAAATTTTATTAAAGTTCGTAAATATTCTGTCAAATTTGCTATTTTGACGATTTTTCTTTATGTTTTATTAATGTAATTCAGTATTTAAAATTTAAAATCTTCTTAATTCAAAACTTGAAAACATAATGATATTATTTTAAGAGCTTATATTATATGTCCAAAGATGGAAACAAATGAATATCAGAGGAAAAATTAGTTTAAAAACAGAAAATTGTTTTACTACACCTATTTTTTTAAAAAATAAAACAAAATTCACTTGTAGTTTCAAACATATTTAAAAAAAAACAAAAATGAAAACTAAAGATAAAAGATTTTTTAAAATTATGCATATAAATACCATTTCATCTCAAGTTTTCTTGTTTTATTATTTACTTTTAGAAACAATTTCAAAAACTAACCCGAACAATTTAGAGGCTAAAAACTCGTTTTTAAAAACTTATTTTTTGTTTTTGTAATTTTGTTAACTCAATAAATTTACTTAATTAATTAACACAGTTTATTATTATTGCTAATTGGGGAAAAAAATATCATACACAAGTTAGCCGATTTCAAATGTGTCGGTGGGAGAGGAACACACCAATTTTAAAAAATTGAGTATGTATTAATTTTTTTTCTTTTTAGTTAAACATTAAAATTTGTTCTTAATGTTCTGCATGCAAAGGAAAAAAGAAACAATAAAATTCTGGATAATATTATTGTAGAATAATTTCAAGCTGGAAGTGTTCAATTTTAAAAGGGAAACAGAAATTGTAAATGATGGTTCCTTGAAGCTTCTTCATGGCCCTACCTGTTGCCTTTATCTCTTTCCTTAATTCAAAATGATTTGATCTGAAGATATTTTCAATTTGTTTAATAAAACTTGTTTGGAAAAACATTGAAACTAAGAATCTTTCACACATCATGTTTCCTGTTCCCTGATTCCTTGGATTTGGCATAAAATACCATCTTAGGTTTAGCTGTTGTATTTTATTTTTAATATAGACGTGTGTGTTTCATCAAGAAGTCAGAGATAGGAGTGGAGATTGAGACCAACCAAATAAAACAATGGACCAATTCAAACTAATTAATCAAAACATTGGAAGGAAACCGAATATTTGGCAGTTTGGTTTTGGTTTAGTGTATATTTTTCAACGTTTTAATATTCCCCTAGTTAGAGGTTTGGATATTCTGAGTTTGATGATAGCTAAAATGTTGCTCATGTTTGTGAATACTAGTCCATCTGAATGGAACACGGGGACAGCATCGATGATGACATCAACGAAAAATTGTTATGGGGAAACGGCACCAATGGGGGGGACGACGTACCCGGGAGGGTACCCTATTCAAATGAGGGTTGTGGATGAAGTGATAAGGGAGATGAGGAAGCCAGTATACTTATTGGACATAACAATGTTATCTGAGCTAAGAAAAGATGGACACCCTTCCATTTATAGTGGTGATTTGAATCCTCAACAAAGGGCTAACCCAGATAGATCAGCGGATTGTAGCCATTGGTGTCTTCCTGGCTTACCAGATACTTGGAACCAATTGTTTTATACTGCATTGTTCTTTTAGCTCTACCCCTACTTGTTCTAATGCAATTTAATTCAGGGATATATTGGAATTAATCTTTGATCTTTCCTTCTACTATGGTGTAATTTGTAAAGTAATAGCTGATTTATTGTTAGTTTAGAGAAATGCATGGGAGTATAGAGACACTATTCTGGATCATGGTTTTATCTGTTTTTTCATTTAAGTATTTTATTTTAAGTTTCAAAATCGAAGTTGGCAAAAGTTTATACCGCAATATACACCATTAATTACATT

Coding sequence (CDS)

ATGGGGTTTTTGGGATTTTGGCCTTGTTTGGCAGCATTGTTTTTCATTTCTCTTCATACCCATTTAGCTTCCTCAGCTTTGATTCTCAGTTTGAAGCACCATTACCGGAACAGCGACCACCATAATCGCCGCCCAATGCTTCAAGCTAACCAAACCGGCTGTGCTCTGTTCGCCGGAACTTGGGTTCGAGATGATTCATATCCACTTTACCAAGCTTCTAACTGTCCATTTATCGATCCTGAGTTCAACTGCCAAGCTTACGGCAGACCCGATTCAAATTACCTCAAGTACCGTTGGCAGCCGCTCGATTGTGAGCTCCCAAGGTTCGATGGGGCTGAGTTTTTGATGAGAATGAGAGGAAGAACTGTGATGTTTGTTGGTGATTCATTGGGGAGAAACCAATGGGAGTCATTGATTTGTTTGATCGTGTCATCTTCTCCTCAAACTCCTACTCAAATGACTAGAGGAGAACCTCTTTCAACCTTCAGATTCCTGGAATATGAGTTAACTGTGTCCTATTACAAAGCCCCGTATCTTGTGGACATAGAGATAGAGAATGGGAAGAGAGTGTTGAAGCTGGAGGAGATATCAATGAATGGAAATGCTTGGGTTGGAGCTGATGTTATTTCCTTCAACACTGGACATTGGTGGAGCCACACTGGCTCTCTACAAGGGTTTGTTATGAAACTTGAAATCTTGATGATGAAGATGATTAATCTGTGCTATTTGCAAAATATATCCCTAATCTTTACCTTTTTTTGA

Protein sequence

MGFLGFWPCLAALFFISLHTHLASSALILSLKHHYRNSDHHNRRPMLQANQTGCALFAGTWVRDDSYPLYQASNCPFIDPEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRGRTVMFVGDSLGRNQWESLICLIVSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLVDIEIENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQGFVMKLEILMMKMINLCYLQNISLIFTFF

Homology

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BLAST of Cucsat.G8127 vs. ExPASy Swiss-Prot
Match: Q9LUZ6 (Protein PMR5 OS=Arabidopsis thaliana OX=3702 GN=PMR5 PE=2 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 6.0e-79
Identity = 139/227 (61.23%), Postives = 182/227 (80.18%), Query Frame = 0


Query: 10  LAALFFISL-HTHLASSALILSLKHHYRNS------DHHNRRPM--LQANQTGCALFAGT 69
           ++A+FF+ L     +SSA+ILSLK  + +S       + + RP    Q N++ C+LF GT
Sbjct: 13  VSAIFFLVLQQPEQSSSAIILSLKKRHGSSSGSSGNQYSSSRPSAGFQGNRSTCSLFLGT 72

Query: 70  WVRDDSYPLYQASNCP-FIDPEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMR 129
           WVRD+SYPLY+ ++CP  ++PEF+CQ YGRPDS+YLKYRWQP +C LP F+GA+FL++M+
Sbjct: 73  WVRDNSYPLYKPADCPGVVEPEFDCQMYGRPDSDYLKYRWQPQNCNLPTFNGAQFLLKMK 132

Query: 130 GRTVMFVGDSLGRNQWESLICLIVSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYL 189
           G+T+MF GDSLG+NQWESLICLIVSS+P T T+MTRG PLSTFRFL+Y +T+S+YKAP+L
Sbjct: 133 GKTIMFAGDSLGKNQWESLICLIVSSAPSTRTEMTRGLPLSTFRFLDYGITMSFYKAPFL 192

Query: 190 VDIEIENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQGF 227
           VDI+   GKRVLKL+EIS N NAW  AD++ FNTGHWWSHTGS+QG+
Sbjct: 193 VDIDAVQGKRVLKLDEISGNANAWHDADLLIFNTGHWWSHTGSMQGW 239

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BLAST of Cucsat.G8127 vs. ExPASy Swiss-Prot
Match: O80872 (Protein trichome birefringence-like 45 OS=Arabidopsis thaliana OX=3702 GN=TBL45 PE=2 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 5.3e-67
Identity = 123/226 (54.42%), Postives = 161/226 (71.24%), Query Frame = 0


Query: 9   CLAALFFISLHTHLASSALIL---SLKHHYRNSDHHNRRP--MLQANQTGCALFAGTWVR 68
           CL  LF   L    ++S L L    ++ ++ N   H RR   +   N + C LFAG WVR
Sbjct: 6   CLTFLFLFLLQNATSASPLPLFRRPIQSNHSNFVKHPRRSQVVFPVNHSSCDLFAGEWVR 65

Query: 69  DDSYPLYQASNC--PFIDPEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRGR 128
           D++YPLY++  C    IDP F+CQ YGRPDS+YLK+RW+P +C +PRF+G +FL  MR +
Sbjct: 66  DETYPLYRSKECGRGIIDPGFDCQTYGRPDSDYLKFRWKPFNCNVPRFNGVKFLQEMRDK 125

Query: 129 TVMFVGDSLGRNQWESLICLIVSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLVD 188
           T+MFVGDSLGRNQWESLIC+I SS+P   T +   +PLSTF+ L+Y + VS+Y+APYLVD
Sbjct: 126 TIMFVGDSLGRNQWESLICMISSSAPSINTHIIHEDPLSTFKILDYNVKVSFYRAPYLVD 185

Query: 189 IEIENGKRVLKLEEISMN-GNAWVGADVISFNTGHWWSHTGSLQGF 227
           I+  NGK  LKL+EIS++  NAW  ADV+ FNTGHWWSHTGSL+G+
Sbjct: 186 IDKINGKTTLKLDEISVDASNAWRTADVLLFNTGHWWSHTGSLRGW 231

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BLAST of Cucsat.G8127 vs. ExPASy Swiss-Prot
Match: O22960 (Protein trichome birefringence-like 37 OS=Arabidopsis thaliana OX=3702 GN=TBL37 PE=2 SV=2)

HSP 1 Score: 206.8 bits (525), Expect = 2.8e-52
Identity = 92/170 (54.12%), Postives = 113/170 (66.47%), Query Frame = 0


Query: 52  TGCALFAGTWVRDDSYPLYQASNCPFIDPEFNCQAYGRPDSNYLKYRWQPLDCELPRFDG 111
           +GC LF G WV D SYP Y +S CPFID EF+C  +GRPD  +LKY WQP  C +PRFDG
Sbjct: 63  SGCNLFQGRWVFDASYPFYDSSTCPFIDGEFDCLKFGRPDKQFLKYSWQPDSCTVPRFDG 122

Query: 112 AEFLMRMRGRTVMFVGDSLGRNQWESLICLIVSSSPQTPTQMTRGEPLSTFRFLEYELTV 171
             FL + RG+ VMFVGDSL  N WESL C+I SS P T T   +  PLS+  F EY++T+
Sbjct: 123 EAFLKKWRGKRVMFVGDSLSLNMWESLACMIHSSVPNTKTTFLKRTPLSSLTFQEYDVTL 182

Query: 172 SYYKAPYLVDIEIENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTG 222
             Y+ PYLVDI  E+  RVL L  I    +AW   D++ FN+ HWW+HTG
Sbjct: 183 FLYRTPYLVDISKESVGRVLNLGAIEDGADAWKNMDLLVFNSWHWWTHTG 232

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BLAST of Cucsat.G8127 vs. ExPASy Swiss-Prot
Match: Q8VY22 (Protein trichome birefringence-like 38 OS=Arabidopsis thaliana OX=3702 GN=TBL38 PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.8e-52
Identity = 101/222 (45.50%), Postives = 129/222 (58.11%), Query Frame = 0


Query: 6   FWPCLAALFFISLHTHLAS-SALILSLKHHYRNSDHHNRRPMLQANQTGCALFAGTWVRD 65
           F P L       +    AS  AL+++ ++   +    + R   Q   +GC LF G WV D
Sbjct: 12  FLPLLTVTILSGVEQAFASDKALLVTGRNITADGGRSSLRGKKQRRASGCNLFQGRWVFD 71

Query: 66  DSYPLYQASNCPFIDPEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRGRTVM 125
            SYP Y +S CPFID EF+C  +GRPD  +LKY WQP  C +PRFDG  FL + RG+ VM
Sbjct: 72  ASYPFYDSSKCPFIDGEFDCLKFGRPDKQFLKYSWQPESCTIPRFDGGAFLRKYRGKRVM 131

Query: 126 FVGDSLGRNQWESLICLIVSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLVDIEI 185
           FVGDSL  N WESL C+I +S P   T   +  PLST  F EY +T+  Y+ PY+VDI  
Sbjct: 132 FVGDSLSLNMWESLACMIHASVPNAKTTFLKRTPLSTLTFQEYGVTLYLYRTPYIVDISK 191

Query: 186 ENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQGF 227
           E   RVL L  I    +AW   DV+ FN+ HWW+H G  QG+
Sbjct: 192 ERVGRVLNLGAIEGGADAWKNMDVLVFNSWHWWTHKGQSQGW 233

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BLAST of Cucsat.G8127 vs. ExPASy Swiss-Prot
Match: Q9SIN2 (Protein trichome birefringence-like 39 OS=Arabidopsis thaliana OX=3702 GN=TBL39 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.7e-52
Identity = 100/199 (50.25%), Postives = 125/199 (62.81%), Query Frame = 0


Query: 27  LILSLKHHYRNSDHHNRRPMLQANQTG-CALFAGTWVRDDSYPLYQASNCPFIDPEFNCQ 86
           L LS    Y NS   N   + +   +G C  F G WV D  YPLY    CPFIDP+FNC+
Sbjct: 19  LCLSTVSAYINSTSSNNDEVRRELASGRCNWFRGNWVYDVKYPLYDPYKCPFIDPQFNCK 78

Query: 87  AYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRGRTVMFVGDSLGRNQWESLICLIVSS 146
            YGRPD+ YLKYRWQP  C LPRF+G  FL RMRG+ +MFVGDSL  N W+SL CLI S 
Sbjct: 79  KYGRPDNAYLKYRWQPSSCSLPRFNGLYFLRRMRGKKIMFVGDSLSTNMWQSLACLIHSW 138

Query: 147 SPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLVDIEIENGKRVLKLEEISMNGNAWVG 206
            P T   + R + L++  F EY +T+  Y+  +LVD+ +E   RVLKL+ I   GN W G
Sbjct: 139 VPNTRYTLIRQKGLASLTFEEYGVTLLLYRTQFLVDLNVEKVGRVLKLDSIK-QGNMWRG 198

Query: 207 ADVISFNTGHWWSHTGSLQ 225
            DV+ FN+ HWW+HT  +Q
Sbjct: 199 MDVLIFNSWHWWTHTEHIQ 216

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BLAST of Cucsat.G8127 vs. NCBI nr
Match: XP_004145251.1 (protein PMR5 [Cucumis sativus])

HSP 1 Score: 479 bits (1232), Expect = 8.25e-168
Identity = 225/226 (99.56%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MGFLGFWPCLAALFFISLHTHLASSALILSLKHHYRNSDHHNRRPMLQANQTGCALFAGT 60
           MGFLGFWPCLAALFFISLHTHLASSALILSLKHHYRNSDHHNRRPMLQANQTGCALFAGT
Sbjct: 1   MGFLGFWPCLAALFFISLHTHLASSALILSLKHHYRNSDHHNRRPMLQANQTGCALFAGT 60

Query: 61  WVRDDSYPLYQASNCPFIDPEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRG 120
           WVRDDSYPLYQASNCPFIDPEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRG
Sbjct: 61  WVRDDSYPLYQASNCPFIDPEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRG 120

Query: 121 RTVMFVGDSLGRNQWESLICLIVSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLV 180
           RTVMFVGDSLGRNQWESLICLIVSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLV
Sbjct: 121 RTVMFVGDSLGRNQWESLICLIVSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLV 180

Query: 181 DIEIENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQGF 226
           DIEIENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQG+
Sbjct: 181 DIEIENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQGW 226

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BLAST of Cucsat.G8127 vs. NCBI nr
Match: XP_008457360.1 (PREDICTED: protein PMR5-like [Cucumis melo])

HSP 1 Score: 467 bits (1201), Expect = 4.61e-163
Identity = 220/226 (97.35%), Postives = 223/226 (98.67%), Query Frame = 0


Query: 1   MGFLGFWPCLAALFFISLHTHLASSALILSLKHHYRNSDHHNRRPMLQANQTGCALFAGT 60
           MGFLGFWP LAALFFISLHTHLASSALILSLKHHYRNSDHHNRRPMLQANQT CALFAGT
Sbjct: 1   MGFLGFWPYLAALFFISLHTHLASSALILSLKHHYRNSDHHNRRPMLQANQTSCALFAGT 60

Query: 61  WVRDDSYPLYQASNCPFIDPEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRG 120
           WVRD+SYPLYQASNCPFIDPEFNCQAYGRPDSNYL+YRWQPLDCELPRFDGAEFLMRMRG
Sbjct: 61  WVRDNSYPLYQASNCPFIDPEFNCQAYGRPDSNYLQYRWQPLDCELPRFDGAEFLMRMRG 120

Query: 121 RTVMFVGDSLGRNQWESLICLIVSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLV 180
           RTVMFVGDSLGRNQWESLICLI SSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLV
Sbjct: 121 RTVMFVGDSLGRNQWESLICLIFSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLV 180

Query: 181 DIEIENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQGF 226
           DIEIENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQG+
Sbjct: 181 DIEIENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQGW 226

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BLAST of Cucsat.G8127 vs. NCBI nr
Match: XP_038895652.1 (protein PMR5-like [Benincasa hispida])

HSP 1 Score: 454 bits (1168), Expect = 4.66e-158
Identity = 209/226 (92.48%), Postives = 218/226 (96.46%), Query Frame = 0


Query: 1   MGFLGFWPCLAALFFISLHTHLASSALILSLKHHYRNSDHHNRRPMLQANQTGCALFAGT 60
           MGF  FWPCLA LFFI LHTHLASSALI+SLKHHYRN+DHHNRRPMLQANQ+ CALFAGT
Sbjct: 1   MGFFSFWPCLATLFFILLHTHLASSALIISLKHHYRNNDHHNRRPMLQANQSSCALFAGT 60

Query: 61  WVRDDSYPLYQASNCPFIDPEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRG 120
           WVRDDSYPLYQ+SNCPFIDP+FNCQ YGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRG
Sbjct: 61  WVRDDSYPLYQSSNCPFIDPQFNCQVYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRG 120

Query: 121 RTVMFVGDSLGRNQWESLICLIVSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLV 180
           RTVMFVGDSLGRNQWESLICLI+SS+PQTPTQM RGEPLSTFRF+EYELTVSYYKAPYLV
Sbjct: 121 RTVMFVGDSLGRNQWESLICLILSSAPQTPTQMIRGEPLSTFRFIEYELTVSYYKAPYLV 180

Query: 181 DIEIENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQGF 226
           DI IENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQG+
Sbjct: 181 DINIENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQGW 226

[Close]

BLAST of Cucsat.G8127 vs. NCBI nr
Match: KAG7036995.1 (Protein PMR5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 427 bits (1097), Expect = 1.13e-149
Identity = 198/230 (86.09%), Postives = 214/230 (93.04%), Query Frame = 0


Query: 4   LGFWPCLAALFFISLHTHLASSALILSLKHHYRNSDHHNRRPMLQANQTGCALFAGTWVR 63
           +GFWPCLA+L    LH+ LASSALILSLKHHYRN+DHHNRRP+LQANQ+ CALF+GTWVR
Sbjct: 1   MGFWPCLASLCLFLLHSQLASSALILSLKHHYRNNDHHNRRPVLQANQSSCALFSGTWVR 60

Query: 64  DDSYPLYQASNCPFIDPEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRGRTV 123
           DDSYPLYQ SNCPFID EFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFL RMRGRTV
Sbjct: 61  DDSYPLYQFSNCPFIDAEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLTRMRGRTV 120

Query: 124 MFVGDSLGRNQWESLICLIVSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLVDIE 183
           MFVGDSLGRNQWESLICLI++S+PQTPTQM RGEPLSTF FLEY L ++YYKA YLVDIE
Sbjct: 121 MFVGDSLGRNQWESLICLILASAPQTPTQMVRGEPLSTFTFLEYGLNLNYYKATYLVDIE 180

Query: 184 IENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQGFVMKLEIL 233
           IENGKR+LKLEEIS+NGNAW GADVISFNTGHWWSHTGSLQGF ++LEIL
Sbjct: 181 IENGKRILKLEEISVNGNAWKGADVISFNTGHWWSHTGSLQGFDIELEIL 230

[Close]

BLAST of Cucsat.G8127 vs. NCBI nr
Match: XP_023521759.1 (protein PMR5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 422 bits (1085), Expect = 1.70e-145
Identity = 195/223 (87.44%), Postives = 208/223 (93.27%), Query Frame = 0


Query: 4   LGFWPCLAALFFISLHTHLASSALILSLKHHYRNSDHHNRRPMLQANQTGCALFAGTWVR 63
           +GFWPCLA+L    LH+ LASSALILSLKHHYRN+DHHNRRP+LQANQT CALF+GTWVR
Sbjct: 1   MGFWPCLASLCLFLLHSQLASSALILSLKHHYRNNDHHNRRPVLQANQTSCALFSGTWVR 60

Query: 64  DDSYPLYQASNCPFIDPEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRGRTV 123
           DDSYPLYQ SNCPFID EFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFL RMRGRTV
Sbjct: 61  DDSYPLYQFSNCPFIDAEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLTRMRGRTV 120

Query: 124 MFVGDSLGRNQWESLICLIVSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLVDIE 183
           MFVGDSLGRNQWESLICLI++S+PQTPTQM RGEPLSTF FLEY L ++YYKA YLVDIE
Sbjct: 121 MFVGDSLGRNQWESLICLILASAPQTPTQMVRGEPLSTFTFLEYGLNLNYYKATYLVDIE 180

Query: 184 IENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQGF 226
           IENGKR+LKLEEISMNGNAW GADVISFNTGHWWSHTGSLQG+
Sbjct: 181 IENGKRILKLEEISMNGNAWKGADVISFNTGHWWSHTGSLQGW 223

[Close]

BLAST of Cucsat.G8127 vs. ExPASy TrEMBL
Match: A0A0A0M0U4 (PMR5N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532290 PE=3 SV=1)

HSP 1 Score: 479 bits (1232), Expect = 4.00e-168
Identity = 225/226 (99.56%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MGFLGFWPCLAALFFISLHTHLASSALILSLKHHYRNSDHHNRRPMLQANQTGCALFAGT 60
           MGFLGFWPCLAALFFISLHTHLASSALILSLKHHYRNSDHHNRRPMLQANQTGCALFAGT
Sbjct: 1   MGFLGFWPCLAALFFISLHTHLASSALILSLKHHYRNSDHHNRRPMLQANQTGCALFAGT 60

Query: 61  WVRDDSYPLYQASNCPFIDPEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRG 120
           WVRDDSYPLYQASNCPFIDPEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRG
Sbjct: 61  WVRDDSYPLYQASNCPFIDPEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRG 120

Query: 121 RTVMFVGDSLGRNQWESLICLIVSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLV 180
           RTVMFVGDSLGRNQWESLICLIVSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLV
Sbjct: 121 RTVMFVGDSLGRNQWESLICLIVSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLV 180

Query: 181 DIEIENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQGF 226
           DIEIENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQG+
Sbjct: 181 DIEIENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQGW 226

[Close]

BLAST of Cucsat.G8127 vs. ExPASy TrEMBL
Match: A0A1S3C4W9 (protein PMR5-like OS=Cucumis melo OX=3656 GN=LOC103497067 PE=3 SV=1)

HSP 1 Score: 467 bits (1201), Expect = 2.23e-163
Identity = 220/226 (97.35%), Postives = 223/226 (98.67%), Query Frame = 0


Query: 1   MGFLGFWPCLAALFFISLHTHLASSALILSLKHHYRNSDHHNRRPMLQANQTGCALFAGT 60
           MGFLGFWP LAALFFISLHTHLASSALILSLKHHYRNSDHHNRRPMLQANQT CALFAGT
Sbjct: 1   MGFLGFWPYLAALFFISLHTHLASSALILSLKHHYRNSDHHNRRPMLQANQTSCALFAGT 60

Query: 61  WVRDDSYPLYQASNCPFIDPEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRG 120
           WVRD+SYPLYQASNCPFIDPEFNCQAYGRPDSNYL+YRWQPLDCELPRFDGAEFLMRMRG
Sbjct: 61  WVRDNSYPLYQASNCPFIDPEFNCQAYGRPDSNYLQYRWQPLDCELPRFDGAEFLMRMRG 120

Query: 121 RTVMFVGDSLGRNQWESLICLIVSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLV 180
           RTVMFVGDSLGRNQWESLICLI SSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLV
Sbjct: 121 RTVMFVGDSLGRNQWESLICLIFSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLV 180

Query: 181 DIEIENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQGF 226
           DIEIENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQG+
Sbjct: 181 DIEIENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQGW 226

[Close]

BLAST of Cucsat.G8127 vs. ExPASy TrEMBL
Match: A0A6J1KAJ4 (protein PMR5-like OS=Cucurbita maxima OX=3661 GN=LOC111493169 PE=3 SV=1)

HSP 1 Score: 421 bits (1082), Expect = 2.35e-145
Identity = 195/223 (87.44%), Postives = 207/223 (92.83%), Query Frame = 0


Query: 4   LGFWPCLAALFFISLHTHLASSALILSLKHHYRNSDHHNRRPMLQANQTGCALFAGTWVR 63
           +GFWPCLA L    LH+ LASSALILSLKHHYRNSDHHNRRPMLQANQ+ CALF+GTWVR
Sbjct: 1   MGFWPCLAPLCLFLLHSQLASSALILSLKHHYRNSDHHNRRPMLQANQSSCALFSGTWVR 60

Query: 64  DDSYPLYQASNCPFIDPEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRGRTV 123
           DDSYPLYQ SNCPFID EFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFL RMRGRTV
Sbjct: 61  DDSYPLYQFSNCPFIDAEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLTRMRGRTV 120

Query: 124 MFVGDSLGRNQWESLICLIVSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLVDIE 183
           MFVGDSLGRNQWESLICLI++S+PQTPTQM RGEPLSTF FLEY L ++YYKA YLVDIE
Sbjct: 121 MFVGDSLGRNQWESLICLILASAPQTPTQMVRGEPLSTFTFLEYGLNLNYYKATYLVDIE 180

Query: 184 IENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQGF 226
           IENGKR+LKLEEIS+NGNAW GADVISFNTGHWWSHTGSLQG+
Sbjct: 181 IENGKRILKLEEISVNGNAWKGADVISFNTGHWWSHTGSLQGW 223

[Close]

BLAST of Cucsat.G8127 vs. ExPASy TrEMBL
Match: A0A6J1GCI1 (protein PMR5-like OS=Cucurbita moschata OX=3662 GN=LOC111452729 PE=3 SV=1)

HSP 1 Score: 421 bits (1081), Expect = 3.33e-145
Identity = 194/223 (87.00%), Postives = 208/223 (93.27%), Query Frame = 0


Query: 4   LGFWPCLAALFFISLHTHLASSALILSLKHHYRNSDHHNRRPMLQANQTGCALFAGTWVR 63
           +GFWPCLA+L    LH+ LASSALILSLKHHYRN+DHHNRRPMLQANQ+ CALF+GTWVR
Sbjct: 1   MGFWPCLASLCLFLLHSQLASSALILSLKHHYRNNDHHNRRPMLQANQSSCALFSGTWVR 60

Query: 64  DDSYPLYQASNCPFIDPEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRGRTV 123
           DDSYPLYQ SNCPFID EFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFL RMRGRTV
Sbjct: 61  DDSYPLYQFSNCPFIDAEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLTRMRGRTV 120

Query: 124 MFVGDSLGRNQWESLICLIVSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLVDIE 183
           MFVGDSLGRNQWESLICLI++S+PQTPTQM RGEPLSTF FLEY L ++YYKA YLVDIE
Sbjct: 121 MFVGDSLGRNQWESLICLILASAPQTPTQMVRGEPLSTFTFLEYGLNLNYYKATYLVDIE 180

Query: 184 IENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQGF 226
           IENGKR+LKLEEIS+NGNAW GADVISFNTGHWWSHTGSLQG+
Sbjct: 181 IENGKRILKLEEISVNGNAWKGADVISFNTGHWWSHTGSLQGW 223

[Close]

BLAST of Cucsat.G8127 vs. ExPASy TrEMBL
Match: A0A6J1DD02 (protein PMR5 OS=Momordica charantia OX=3673 GN=LOC111018957 PE=3 SV=1)

HSP 1 Score: 399 bits (1025), Expect = 1.11e-136
Identity = 187/226 (82.74%), Postives = 203/226 (89.82%), Query Frame = 0


Query: 1   MGFLGFWPCLAALFFISLHTHLASSALILSLKHHYRNSDHHNRRPMLQANQTGCALFAGT 60
           M  LGF  CLAAL  + LH+  AS ALILSLKHHYR  DHHNRRP+LQ+NQ+ C LFAGT
Sbjct: 1   MALLGFCSCLAAL--LLLHSQPASPALILSLKHHYRGGDHHNRRPVLQSNQSACDLFAGT 60

Query: 61  WVRDDSYPLYQASNCPFIDPEFNCQAYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRG 120
           WVRDD+YPLYQ+SNCP IDPEFNCQ YGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRG
Sbjct: 61  WVRDDAYPLYQSSNCPIIDPEFNCQLYGRPDSNYLKYRWQPLDCELPRFDGAEFLMRMRG 120

Query: 121 RTVMFVGDSLGRNQWESLICLIVSSSPQTPTQMTRGEPLSTFRFLEYELTVSYYKAPYLV 180
           RTVMFVGDSLGRNQWESLICLI++S+PQTPTQM RG+PLSTF F EY L+VS+YKAPYLV
Sbjct: 121 RTVMFVGDSLGRNQWESLICLILASAPQTPTQMIRGDPLSTFTFPEYGLSVSFYKAPYLV 180

Query: 181 DIEIENGKRVLKLEEISMNGNAWVGADVISFNTGHWWSHTGSLQGF 226
           DIEIENGKR+LKLEEI+ NGN W GADVISFNTGHWWSHTGSLQG+
Sbjct: 181 DIEIENGKRILKLEEITGNGNVWRGADVISFNTGHWWSHTGSLQGW 224

The following BLAST results are available for this feature:

BLAST of Cucsat.G8127 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUZ6	6.0e-79	61.23	Protein PMR5 OS=Arabidopsis thaliana OX=3702 GN=PMR5 PE=2 SV=1	[more]
O80872	5.3e-67	54.42	Protein trichome birefringence-like 45 OS=Arabidopsis thaliana OX=3702 GN=TBL45 ...	[more]
O22960	2.8e-52	54.12	Protein trichome birefringence-like 37 OS=Arabidopsis thaliana OX=3702 GN=TBL37 ...	[more]
Q8VY22	2.8e-52	45.50	Protein trichome birefringence-like 38 OS=Arabidopsis thaliana OX=3702 GN=TBL38 ...	[more]
Q9SIN2	3.7e-52	50.25	Protein trichome birefringence-like 39 OS=Arabidopsis thaliana OX=3702 GN=TBL39 ...	[more]

BLAST of Cucsat.G8127 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145251.1	8.25e-168	99.56	protein PMR5 [Cucumis sativus]	[more]
XP_008457360.1	4.61e-163	97.35	PREDICTED: protein PMR5-like [Cucumis melo]	[more]
XP_038895652.1	4.66e-158	92.48	protein PMR5-like [Benincasa hispida]	[more]
KAG7036995.1	1.13e-149	86.09	Protein PMR5 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023521759.1	1.70e-145	87.44	protein PMR5-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G8127 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M0U4	4.00e-168	99.56	PMR5N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G532290 PE=3 ...	[more]
A0A1S3C4W9	2.23e-163	97.35	protein PMR5-like OS=Cucumis melo OX=3656 GN=LOC103497067 PE=3 SV=1	[more]
A0A6J1KAJ4	2.35e-145	87.44	protein PMR5-like OS=Cucurbita maxima OX=3661 GN=LOC111493169 PE=3 SV=1	[more]
A0A6J1GCI1	3.33e-145	87.00	protein PMR5-like OS=Cucurbita moschata OX=3662 GN=LOC111452729 PE=3 SV=1	[more]
A0A6J1DD02	1.11e-136	82.74	protein PMR5 OS=Momordica charantia OX=3673 GN=LOC111018957 PE=3 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026057	PC-Esterase	PFAM	PF13839	PC-Esterase	coord: 2..271 e-value: 1.3E-90 score: 304.0
IPR029962	Trichome birefringence-like family	PANTHER	PTHR32285	PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED	coord: 1..275
IPR029981	PMR5	PANTHER	PTHR32285:SF14	PROTEIN PMR5	coord: 1..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G8127.T1	Cucsat.G8127.T1	mRNA
Cucsat.G8127.T3	Cucsat.G8127.T3	mRNA
Cucsat.G8127.T2	Cucsat.G8127.T2	mRNA
Cucsat.G8127.T4	Cucsat.G8127.T4	mRNA
Cucsat.G8127.T5	Cucsat.G8127.T5	mRNA
Cucsat.G8127.T6	Cucsat.G8127.T6	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016413	O-acetyltransferase activity