Cucsat.G7974 (gene) Cucumber (B10) v3

Overview
NameCucsat.G7974
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionGrpE protein homolog
Locationctg1556: 1319312 .. 1322929 (-)
RNA-Seq ExpressionCucsat.G7974
SyntenyCucsat.G7974
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAATAATGATATTATAATTTATTCTCACCCAAAAAAACCCAACCTTTGTGGCGTCTTCCACTTCCTTCTTCTCTCTTCTCTACCCTTATCTCTCTCTCTCTTTTTGTAAATTCTCTCATGGCGACCCTTCTCAGAACTCCATTTTTTCAGGCAACTCCTCCCGCCAGCGTTTCCGCCTTTTCCTTATCCAAATCCACCCTAAAACCCTCTTCTTTATCCTTTACAACATCTCACTCCTTCATTTGTTGCTTCAACTCCTCCAAGTTTTCAACTCGTCCTCCTTCTCTCCGGTTCCCCAAGCGGCCTTTTGCTTCCTCCGGTGAAACGGAAATTAGCGAGCTTGAAGAGGAAGTTCGCGATTCTGAGGCGGAGGTACTCTTAATCCTTCTTCTTCTGGGAGTTGCTGTTTCTTTACCCTACTTTTGTAGTTTGACTCTTTAGTTGGTTAGGTTAGATAGTGTTGGTGGGTCTGGGTATTCCTTTATGCTGTGCAATTGGTTGGAATAGGATCTCATTGTCATTATCTAATGTTATCAATTGGGCGTTGGAGTGGAGGTGGTTGCTTCTTGCTTTGCTGTTTGAAAATGGAATCAGTTTAGTAAGTGGGAACGTGGCATTCTGGCATTAACTCAATTCGTTGTCTATTTCTCGGTTCTTAATTACTCAACCGAATGATGTCTAGAAAGAGATTTAAAGACAAATATGTTCAGAGTTTTAGACCCTTCTCAAATCTCACCTTTGGAATATCCACTTAATATCTCAATTTTTTGTGGTAACTAAACACAATGGAGTATCGAAGCAGTTTTGGTAGTTCTGGGCCCATGATTCGAGTTTGGTTTAATCATTCTTATTGACATTTTTGCCGTATTGCTCTCAGCAAGTTTATGTGAAAAATAAGATACCTATGCTTTTCTCCAAGTCTAATACTGAAAAGTTTCTGATTCCTCTATGTGCCCTATGCAACTTTGTGGATACTACAAAAATATAATCAAATGATGGGTCTATAAGCTCCATTCAATTCAAGACTAAAATTTAGATGTTGAAATAACATGGTCCATAAAACACAAATTGTGTTCTTTTAGACCTAAAAGTATAAATAATTGATTTGATTTTTGTTAAAATTGGAAGATTTTTGGATATTGGATGTTTAGAGAGTGTAATAACTTTTGGCTATGGAAAATTAATTCGAATGGCATGGATTTAGATTGTTTTAATTAAGTTTGTACAGAAATCGTGCCCTTGCACTTTCTTGTTGCTCATATATTTATGTAACAGGACTCTTCTGTTAGTTATACCGGTGTAGAAGATGCTACAAGTGATAATGACATAAGTGACGACTCAGAAGTTAATACTGAGGATTCCACTCAGTCAGTCATTGTAGCAGCACTTCAGTCCTATAAGCAGGCGTTAGCTGATAACGATGGAGCTCAAATGGTTGAAATAGAGTCTTTTCTGAAGTCAATTGAAGATGAAAAGCTCGCAGTTGAAAGGAAGTTGAGTTCCTTAATTGAAGAACTTTCTGTAGAGAAGGATCGAGTTTTGAGAATCAGTGCTGACTTTGATAATTTTCGGAAGAGAACAGAGCGAGAACGTCTTTCATTAGTAAAAAATGCTCAAGGAGAAGTAGTAGAGACTCTATTAGGTGTCCTGGATAATTTTGAGAGGGCTAGGGCACAGATCAAGGTGGAGACAGAGGGGGAAGAGAAGATCAATCAGAGTTACCAGAGCATCTATAAGCAGTTCACCGAGATTTTGGGCTCCTTGGGTGTAGTTCCTGTTGAGACAATTGGGAAACCGTTTGACCCACTGGTGAGTTTTTTCTTCTTGTCAAGTAATCATTCTTGTGTCTCGTTTCCCCCTTATTCATCAAAGTTTGAGTCACTACTAATCAGTCAGTAGAGTCTAATAAGTGAACTTGTATTCCATGTGTGAACCTGTAGTCTCTTTTATTTAACATGACCATCCATTTTCCTTGACATTTCCCATATTGGTAACTTCCTAAAACTTAATAATTGGTGAACCTGTTTTCGTTAACAAACTGTTCTCTTCTTAAAGTATCTGCCCATGGTGGATTTATCCATCAACTTGATGAGTAAAATGGTGGTATATATTTAATACCATTTGTTCTAGTAAGACTGAGGTCAGACAATAGAAACTTATGGAACTGTTGGACCTTTCCTTCGAAAAGTTATGATCATGACTGGATGAACTTTTTCTGATATCTGATCTTGTAATCTCAAACATGAATATGGTTTAAAACCTAACCAACCCATGAAGGTTCCTTTATTTGTGTCTATTTTGACCATAGAAAAAACAAGAGTTGTGATCAGCTAATGCGAAGACCAAATGATTTCGGTAGCCATCACTTTTGTTTTGCATTTAAAATGATGAGAGCGTGAATCAAATTTTCCTTTATAATATTTTTCCCAAAAGTATGTGATGTAAATTATTGGTGGAGTTCCCTGGATCCATCCATAAGAAGTAATGCGTCTCATATGGGTTATTTTTCATGGAAAAGGATCAAAGAAGAGAAAGTTACTTTGGAAGTGTGCTATCTTGGATCCGTTATCGGTTTTATGGTTGGAGCTCAATAAAAGAATTATTGAAGATAAATTTGAAGATCTAGACCAGGTTCAGAGTGAATCTGATAGTGTCATTGTTGGAGCAAAAAGGTTGAAGACTTTACTAGTTCTGCCAATCAGTCTATTTCATTCAATAGGTGATTTTTCCTCGACAATTTTATCTTTCAAGGAGGCCTTCTCCTGAAATATTGTAACCTATTCAAATTGTTATTATCAATGACAAAGCTATTAGTTCTATCTGATATTGTGACTAATCTCTTGTATCTGTTTAAGTTTTCGACTATCTTCAATCCCATCAAATTTTAAGGTAATGTGTTTTTGTGTTTTCATTTTTGAATTCTATTTGATATGCATTCAAAACTAGCATGGCATGATCAAACATGGAACTAATCAGGGTCCTGTTTTTTTATCTCTCTTTCTGGGGACCAAGTTTGGTAAGTTGAAACTTGTTTAATCAATTTCTTCCTACAGCTTCATGAAGCAATCATGAGGGAGGACTCCACAGAATTTGAGGAAGGTATCATACTCGACGAGTTCCGTAAAGGATTCTTGCTTGGTGACAGACTCTTACGTCCATCAATGGTGAAAGTTTCAGCCGGTCCCGGGCCTGAAAAGTCAGATGAAACCGCACCAGCAGAAAAGCTTGATTCAAGTGAAGAATTTGCAAACTCGGAATCAGAGTCTTCTTAAAACTCCGAATCCTCTTGACCACAATCCAATTTTGATTATAGTCTGAATCTTTTTAATGCCTGATAAGAGACTGGAGATGGAGTTTATTTGTGTTATTATTGGTGATCAAGGTTTTGCAGGCAGAGAATTTTGATATTTGATTTCAGGAAATAGCTTTGGATGATGAAAAAATGTTGTTACCGTGAAGATAATCACTTAGTGAAATGATGTATTTGATTTAGACAAACAATTCTCTTTTTAAAAACTTTTTCGCTATAACTTGTTGAGAGAACTTACCAAAGTTTCTATTGTAAACTTTGTAGAATTTGTTGAATGTGCCTTGATTTCTGAGTTAAAAATGGCATGGTAGACCTCTATTGTAGTGTTTATTTGAAGGAAATTAAAACCACTTTCTCAATTTTATTTCTGTTCATTGATTTCATGACAAATAAGCTCATTG

Coding sequence (CDS)

ATGGCGACCCTTCTCAGAACTCCATTTTTTCAGGCAACTCCTCCCGCCAGCGTTTCCGCCTTTTCCTTATCCAAATCCACCCTAAAACCCTCTTCTTTATCCTTTACAACATCTCACTCCTTCATTTGTTGCTTCAACTCCTCCAAGTTTTCAACTCGTCCTCCTTCTCTCCGGTTCCCCAAGCGGCCTTTTGCTTCCTCCGGTGAAACGGAAATTAGCGAGCTTGAAGAGGAAGTTCGCGATTCTGAGGCGGAGGACTCTTCTGTTAGTTATACCGGTGTAGAAGATGCTACAAGTGATAATGACATAAGTGACGACTCAGAAGTTAATACTGAGGATTCCACTCAGTCAGTCATTGTAGCAGCACTTCAGTCCTATAAGCAGGCGTTAGCTGATAACGATGGAGCTCAAATGGTTGAAATAGAGTCTTTTCTGAAGTCAATTGAAGATGAAAAGCTCGCAGTTGAAAGGAAGTTGAGTTCCTTAATTGAAGAACTTTCTGTAGAGAAGGATCGAGTTTTGAGAATCAGTGCTGACTTTGATAATTTTCGGAAGAGAACAGAGCGAGAACGTCTTTCATTAGTAAAAAATGCTCAAGGAGAAGTAGTAGAGACTCTATTAGGTGTCCTGGATAATTTTGAGAGGGCTAGGGCACAGATCAAGGTGGAGACAGAGGGGGAAGAGAAGATCAATCAGAGTTACCAGAGCATCTATAAGCAGTTCACCGAGATTTTGGGCTCCTTGGGTGTAGTTCCTGTTGAGACAATTGGGAAACCGTTTGACCCACTGCTTCATGAAGCAATCATGAGGGAGGACTCCACAGAATTTGAGGAAGGTATCATACTCGACGAGTTCCGTAAAGGATTCTTGCTTGGTGACAGACTCTTACGTCCATCAATGGTGAAAGTTTCAGCCGGTCCCGGGCCTGAAAAGTCAGATGAAACCGCACCAGCAGAAAAGCTTGATTCAAGTGAAGAATTTGCAAACTCGGAATCAGAGTCTTCTTAA

Protein sequence

MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFPKRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVIVAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQFTEILGSLGVVPVETIGKPFDPLLHEAIMREDSTEFEEGIILDEFRKGFLLGDRLLRPSMVKVSAGPGPEKSDETAPAEKLDSSEEFANSESESS
Homology
BLAST of Cucsat.G7974 vs. ExPASy Swiss-Prot
Match: Q7NDP1 (Protein GrpE OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 GN=grpE PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.5e-18
Identity = 56/139 (40.29%), Postives = 83/139 (59.71%), Query Frame = 0

Query: 156 QSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADFDNF 215
           Q    A A    A   E   F+  I  ++LA E   S L ++L+  + +  R+ ADFDNF
Sbjct: 14  QDPSYAEAATTEASAAEATGFIARI--DQLAAEN--SDLQKKLADYEQKYTRLMADFDNF 73

Query: 216 RKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQFTE 275
           RKRT+RE+  L      ++++ +L V DNF+RARA  + + E EEK++ SYQ +Y+QF  
Sbjct: 74  RKRTQREKDELAYFVSAKLLKDILPVFDNFDRARAFAQPDNEREEKLHNSYQQVYRQFLS 133

Query: 276 ILGSLGVVPVETIGKPFDP 295
           +L  +GV  +E IG+PFDP
Sbjct: 134 VLEKMGVTAMEAIGQPFDP 148

BLAST of Cucsat.G7974 vs. ExPASy Swiss-Prot
Match: Q59978 (Protein GrpE OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=grpE PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.8e-17
Identity = 67/194 (34.54%), Postives = 103/194 (53.09%), Query Frame = 0

Query: 101 ETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVIVAALQSYKQ 160
           E ++S LE +      E S V     E++    D +   E + E S    I AA ++   
Sbjct: 3   EDQVS-LENQTNPVSPEASDVPAVTPEESPQPTD-AVLGEPSGEQSEDPRIGAATETEGG 62

Query: 161 ALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADFDNFRKRTE 220
            L     +     E  +  ++ +  +  ++L+   E+L   K R + ++A+FDNFRKRT+
Sbjct: 63  PLEQEKSS-----EEIIAILQKDLASHRQELAEQSEQLDSIKKRYVALAAEFDNFRKRTQ 122

Query: 221 RERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQFTEILGSL 280
           RE+    K  +G  +  LL V+DNFERAR QIK  ++GE +I++SYQ +YK   + L  L
Sbjct: 123 REKEEQAKLIKGRTITELLPVVDNFERARTQIKPNSDGENQIHKSYQGVYKNLVDSLKGL 182

Query: 281 GVVPVETIGKPFDP 295
           GV P+   GKPFDP
Sbjct: 183 GVAPMRPEGKPFDP 189

BLAST of Cucsat.G7974 vs. ExPASy Swiss-Prot
Match: Q8DJB3 (Protein GrpE OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=grpE PE=3 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 4.9e-17
Identity = 58/176 (32.95%), Postives = 97/176 (55.11%), Query Frame = 0

Query: 119 SSVSYTGVEDATSDNDISDDSEVNTEDSTQSVIVAALQSYKQALADNDGAQMVEIESFLK 178
           S  + T       + +I+ D+  +T D  ++  V  +++  +A    +        +   
Sbjct: 16  SDQTVTNPAAEAQEGEITPDTP-DTVDKVENTPVENVENPAEATPGEEDQASEATSANAA 75

Query: 179 SIEDEKLAVERKLSSLIEELSVEKDRVLRISADFDNFRKRTERERLSLVKNAQGEVVETL 238
            + ++  A+E   +SL + +     + +R++ADF+NFRKRT+RE+  L    +  V+  L
Sbjct: 76  DLLEQIAALEAAKASLSQVVEERNSQYIRLAADFENFRKRTQREKEELELQIKCSVIADL 135

Query: 239 LGVLDNFERARAQIKVETEGEEKINQSYQSIYKQFTEILGSLGVVPVETIGKPFDP 295
           L V+D+FE AR  I+ ETE EEKI++SYQ +YKQ  E L  +GV  ++  GKPFDP
Sbjct: 136 LPVVDSFELARTHIQTETEAEEKIHRSYQGVYKQLVECLKRIGVSAMQAKGKPFDP 190

BLAST of Cucsat.G7974 vs. ExPASy Swiss-Prot
Match: A9B9L4 (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9211) OX=93059 GN=grpE PE=3 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.4e-17
Identity = 54/158 (34.18%), Postives = 82/158 (51.90%), Query Frame = 0

Query: 167 GAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADFDNFRKRTERERLSL 226
           GA+     S  K    + L  E +L  L  E      + +RI+ADFDNFRKR  R++  L
Sbjct: 45  GAETDVTSSDAKDSSSQALDNEARLEQLEREHETLNSQYMRIAADFDNFRKRQSRDQDDL 104

Query: 227 VKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQFTEILGSLGVVPVE 286
               Q   + ++L V+DNF+RAR Q+  E E  + +++SYQ +YKQ  ++L  LGV P+ 
Sbjct: 105 RLQLQCNTLSSILPVVDNFDRARQQLNPEGEEAQALHKSYQGLYKQLVDVLKQLGVAPMR 164

Query: 287 TIGKPFDPLVSFFFLSSNHSCVSFPPYSSKFESLLISQ 325
            +G+ FDP        S H  V   P     E +++ +
Sbjct: 165 VVGQTFDP--------SLHEAVLREPSDELAEDIIVEE 194

BLAST of Cucsat.G7974 vs. ExPASy Swiss-Prot
Match: A2BTV4 (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9515) OX=167542 GN=grpE PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.9e-16
Identity = 58/195 (29.74%), Postives = 105/195 (53.85%), Query Frame = 0

Query: 131 SDNDISDDSEVNTEDS-TQSVIVAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVER 190
           SDN  + D  V+ +++ ++++ +A  Q+ +     +D  + ++ E    +I +     + 
Sbjct: 6   SDNVENKDENVSMDNNISENLPIAEEQTNEDKKLPDDNNEKIDAEDLKNTITNN----DA 65

Query: 191 KLSSLIEELSVEKDRVLRISADFDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERAR 250
           +L  L +E    K + +RI+ADFDNFRKR  R++  L      + +  +L ++DNFERAR
Sbjct: 66  RLEQLEKEHETLKSQYVRIAADFDNFRKRQSRDQDDLKIQLVSKALTAILPIVDNFERAR 125

Query: 251 AQIKVETEGEEKINQSYQSIYKQFTEILGSLGVVPVETIGKPFDPLVSFFFLSSNHSCVS 310
            Q+K E +  + +++SYQ +YKQ  E+L   GV P+  +G+ FDP        + H  V 
Sbjct: 126 QQLKPEGDEAQTLHRSYQGLYKQLVEVLKQQGVAPMRVVGQQFDP--------NLHEAVL 185

Query: 311 FPPYSSKFESLLISQ 325
             P   + E ++I +
Sbjct: 186 REPSEEQNEDIIIEE 188

BLAST of Cucsat.G7974 vs. NCBI nr
Match: KAE8649656.1 (hypothetical protein Csa_012583 [Cucumis sativus])

HSP 1 Score: 478 bits (1229), Expect = 1.48e-167
Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0

Query: 33  MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 92
           MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP
Sbjct: 1   MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 60

Query: 93  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVIV 152
           KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVI+
Sbjct: 61  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVII 120

Query: 153 AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF 212
           AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF
Sbjct: 121 AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF 180

Query: 213 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 272
           DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ
Sbjct: 181 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240

Query: 273 FTEILGSLGVVPVETIGKPFDPL 295
           FTEILGSLGVVPVETIGKPFDPL
Sbjct: 241 FTEILGSLGVVPVETIGKPFDPL 263

BLAST of Cucsat.G7974 vs. NCBI nr
Match: XP_004144308.1 (uncharacterized protein LOC101213532 [Cucumis sativus])

HSP 1 Score: 478 bits (1230), Expect = 3.96e-167
Identity = 262/264 (99.24%), Postives = 264/264 (100.00%), Query Frame = 0

Query: 33  MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 92
           MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP
Sbjct: 1   MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 60

Query: 93  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVIV 152
           KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVI+
Sbjct: 61  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVII 120

Query: 153 AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF 212
           AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF
Sbjct: 121 AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF 180

Query: 213 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 272
           DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ
Sbjct: 181 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240

Query: 273 FTEILGSLGVVPVETIGKPFDPLV 296
           FTEILGSLGVVPVETIGKPFDPL+
Sbjct: 241 FTEILGSLGVVPVETIGKPFDPLL 264

BLAST of Cucsat.G7974 vs. NCBI nr
Match: XP_008455767.1 (PREDICTED: protein GrpE [Cucumis melo] >KAA0043664.1 protein GrpE [Cucumis melo var. makuwa] >TYK09698.1 protein GrpE [Cucumis melo var. makuwa])

HSP 1 Score: 461 bits (1187), Expect = 1.38e-160
Identity = 255/264 (96.59%), Postives = 260/264 (98.48%), Query Frame = 0

Query: 33  MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 92
           MATLLRTPFFQAT PASVSAFSLSKSTLKPSSLSFTTSHSFIC  NSSKFSTRPPSLRFP
Sbjct: 1   MATLLRTPFFQATAPASVSAFSLSKSTLKPSSLSFTTSHSFICSINSSKFSTRPPSLRFP 60

Query: 93  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVIV 152
           KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVN EDSTQSVIV
Sbjct: 61  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNAEDSTQSVIV 120

Query: 153 AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF 212
           AALQSYKQAL+DN+GAQ+VEIESFLKSIEDEKLAVERKL+SLIEELSVEKDRVLRISADF
Sbjct: 121 AALQSYKQALSDNNGAQIVEIESFLKSIEDEKLAVERKLNSLIEELSVEKDRVLRISADF 180

Query: 213 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 272
           DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ
Sbjct: 181 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240

Query: 273 FTEILGSLGVVPVETIGKPFDPLV 296
           FTEILGSLGVVPVETIGKPFDPL+
Sbjct: 241 FTEILGSLGVVPVETIGKPFDPLL 264

BLAST of Cucsat.G7974 vs. NCBI nr
Match: XP_038883543.1 (protein GrpE isoform X2 [Benincasa hispida])

HSP 1 Score: 435 bits (1118), Expect = 1.20e-150
Identity = 243/264 (92.05%), Postives = 250/264 (94.70%), Query Frame = 0

Query: 33  MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 92
           MATLLRTPFFQATPPA+VSA S SKSTLKPSSLS TTSHS ICC NSSKFS RP SLRFP
Sbjct: 1   MATLLRTPFFQATPPATVSAISSSKSTLKPSSLSLTTSHSIICCINSSKFSPRPRSLRFP 60

Query: 93  KR-PFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVI 152
           K  PFASSGETEISELEEEVR+SEAEDSSVSYTGVEDATSDND+SDDSEVN EDS QSVI
Sbjct: 61  KLLPFASSGETEISELEEEVRESEAEDSSVSYTGVEDATSDNDLSDDSEVNAEDSAQSVI 120

Query: 153 VAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISAD 212
           +AALQSYKQALADN+GAQ+VEIESFLKSIE+EKLAVE KL SL EELSVEKDRVLRISAD
Sbjct: 121 IAALQSYKQALADNNGAQIVEIESFLKSIEEEKLAVETKLKSLTEELSVEKDRVLRISAD 180

Query: 213 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 272
           FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 273 QFTEILGSLGVVPVETIGKPFDPL 295
           QFTEILGSLGVVPVETIGKPFDPL
Sbjct: 241 QFTEILGSLGVVPVETIGKPFDPL 264

BLAST of Cucsat.G7974 vs. NCBI nr
Match: XP_038883542.1 (protein GrpE isoform X1 [Benincasa hispida])

HSP 1 Score: 435 bits (1119), Expect = 3.14e-150
Identity = 243/265 (91.70%), Postives = 251/265 (94.72%), Query Frame = 0

Query: 33  MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 92
           MATLLRTPFFQATPPA+VSA S SKSTLKPSSLS TTSHS ICC NSSKFS RP SLRFP
Sbjct: 1   MATLLRTPFFQATPPATVSAISSSKSTLKPSSLSLTTSHSIICCINSSKFSPRPRSLRFP 60

Query: 93  KR-PFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVI 152
           K  PFASSGETEISELEEEVR+SEAEDSSVSYTGVEDATSDND+SDDSEVN EDS QSVI
Sbjct: 61  KLLPFASSGETEISELEEEVRESEAEDSSVSYTGVEDATSDNDLSDDSEVNAEDSAQSVI 120

Query: 153 VAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISAD 212
           +AALQSYKQALADN+GAQ+VEIESFLKSIE+EKLAVE KL SL EELSVEKDRVLRISAD
Sbjct: 121 IAALQSYKQALADNNGAQIVEIESFLKSIEEEKLAVETKLKSLTEELSVEKDRVLRISAD 180

Query: 213 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 272
           FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 273 QFTEILGSLGVVPVETIGKPFDPLV 296
           QFTEILGSLGVVPVETIGKPFDPL+
Sbjct: 241 QFTEILGSLGVVPVETIGKPFDPLL 265

BLAST of Cucsat.G7974 vs. ExPASy TrEMBL
Match: A0A0A0L229 (GrpE protein homolog OS=Cucumis sativus OX=3659 GN=Csa_4G417510 PE=3 SV=1)

HSP 1 Score: 478 bits (1230), Expect = 1.92e-167
Identity = 262/264 (99.24%), Postives = 264/264 (100.00%), Query Frame = 0

Query: 33  MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 92
           MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP
Sbjct: 1   MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 60

Query: 93  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVIV 152
           KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVI+
Sbjct: 61  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVII 120

Query: 153 AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF 212
           AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF
Sbjct: 121 AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF 180

Query: 213 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 272
           DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ
Sbjct: 181 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240

Query: 273 FTEILGSLGVVPVETIGKPFDPLV 296
           FTEILGSLGVVPVETIGKPFDPL+
Sbjct: 241 FTEILGSLGVVPVETIGKPFDPLL 264

BLAST of Cucsat.G7974 vs. ExPASy TrEMBL
Match: A0A5D3CEQ0 (GrpE protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G001100 PE=3 SV=1)

HSP 1 Score: 461 bits (1187), Expect = 6.68e-161
Identity = 255/264 (96.59%), Postives = 260/264 (98.48%), Query Frame = 0

Query: 33  MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 92
           MATLLRTPFFQAT PASVSAFSLSKSTLKPSSLSFTTSHSFIC  NSSKFSTRPPSLRFP
Sbjct: 1   MATLLRTPFFQATAPASVSAFSLSKSTLKPSSLSFTTSHSFICSINSSKFSTRPPSLRFP 60

Query: 93  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVIV 152
           KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVN EDSTQSVIV
Sbjct: 61  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNAEDSTQSVIV 120

Query: 153 AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF 212
           AALQSYKQAL+DN+GAQ+VEIESFLKSIEDEKLAVERKL+SLIEELSVEKDRVLRISADF
Sbjct: 121 AALQSYKQALSDNNGAQIVEIESFLKSIEDEKLAVERKLNSLIEELSVEKDRVLRISADF 180

Query: 213 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 272
           DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ
Sbjct: 181 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240

Query: 273 FTEILGSLGVVPVETIGKPFDPLV 296
           FTEILGSLGVVPVETIGKPFDPL+
Sbjct: 241 FTEILGSLGVVPVETIGKPFDPLL 264

BLAST of Cucsat.G7974 vs. ExPASy TrEMBL
Match: A0A1S3C2C6 (GrpE protein homolog OS=Cucumis melo OX=3656 GN=LOC103495867 PE=3 SV=1)

HSP 1 Score: 461 bits (1187), Expect = 6.68e-161
Identity = 255/264 (96.59%), Postives = 260/264 (98.48%), Query Frame = 0

Query: 33  MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 92
           MATLLRTPFFQAT PASVSAFSLSKSTLKPSSLSFTTSHSFIC  NSSKFSTRPPSLRFP
Sbjct: 1   MATLLRTPFFQATAPASVSAFSLSKSTLKPSSLSFTTSHSFICSINSSKFSTRPPSLRFP 60

Query: 93  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVIV 152
           KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVN EDSTQSVIV
Sbjct: 61  KRPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNAEDSTQSVIV 120

Query: 153 AALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISADF 212
           AALQSYKQAL+DN+GAQ+VEIESFLKSIEDEKLAVERKL+SLIEELSVEKDRVLRISADF
Sbjct: 121 AALQSYKQALSDNNGAQIVEIESFLKSIEDEKLAVERKLNSLIEELSVEKDRVLRISADF 180

Query: 213 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 272
           DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ
Sbjct: 181 DNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYKQ 240

Query: 273 FTEILGSLGVVPVETIGKPFDPLV 296
           FTEILGSLGVVPVETIGKPFDPL+
Sbjct: 241 FTEILGSLGVVPVETIGKPFDPLL 264

BLAST of Cucsat.G7974 vs. ExPASy TrEMBL
Match: A0A6J1DNZ1 (uncharacterized protein LOC111021782 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111021782 PE=3 SV=1)

HSP 1 Score: 407 bits (1046), Expect = 5.17e-140
Identity = 226/264 (85.61%), Postives = 245/264 (92.80%), Query Frame = 0

Query: 33  MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 92
           MAT+LRTPFFQATPPASVSA S SKS+LKPSSLSF TSH+ I C NSS   +RP SLRFP
Sbjct: 1   MATVLRTPFFQATPPASVSAVSSSKSSLKPSSLSFRTSHTTIYCINSSSMLSRPRSLRFP 60

Query: 93  K-RPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVI 152
           K   FASSGETE+SE+EEEVR+SEAEDSSVSY+GVEDA SDNDISDD+EV+TED  QSVI
Sbjct: 61  KFARFASSGETEVSEIEEEVRESEAEDSSVSYSGVEDAASDNDISDDAEVDTEDLPQSVI 120

Query: 153 VAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISAD 212
           ++AL+SYKQALADN+GAQ+VEIESFLKSIEDEKLAVERKL SL EEL++EKDR+LRISAD
Sbjct: 121 ISALESYKQALADNNGAQIVEIESFLKSIEDEKLAVERKLQSLTEELTIEKDRILRISAD 180

Query: 213 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 272
           FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 273 QFTEILGSLGVVPVETIGKPFDPL 295
           QFTEIL SLGVVPVET+GKPFDPL
Sbjct: 241 QFTEILASLGVVPVETVGKPFDPL 264

BLAST of Cucsat.G7974 vs. ExPASy TrEMBL
Match: A0A6J1GD85 (GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111453132 PE=3 SV=1)

HSP 1 Score: 408 bits (1049), Expect = 6.63e-140
Identity = 228/265 (86.04%), Postives = 245/265 (92.45%), Query Frame = 0

Query: 33  MATLLRTPFFQATPPASVSAFSLSKSTLKPSSLSFTTSHSFICCFNSSKFSTRPPSLRFP 92
           MAT+LRTPFFQATPPA+VS  S SKSTLKP S+SF TSH+ I C NSSKFS RP SLRFP
Sbjct: 1   MATVLRTPFFQATPPATVSTISSSKSTLKPLSVSFRTSHATISCINSSKFSLRPRSLRFP 60

Query: 93  K-RPFASSGETEISELEEEVRDSEAEDSSVSYTGVEDATSDNDISDDSEVNTEDSTQSVI 152
           K   F+SSGETEISE+EEEVR+SEAEDSSVSYTGVEDA SD+DI+DD+EVN ED  QSVI
Sbjct: 61  KLASFSSSGETEISEVEEEVRESEAEDSSVSYTGVEDAASDSDITDDAEVNAEDVAQSVI 120

Query: 153 VAALQSYKQALADNDGAQMVEIESFLKSIEDEKLAVERKLSSLIEELSVEKDRVLRISAD 212
           ++ALQSYKQALADN+GAQ+VEIES+LKSIEDEKLAVERKL SL EELSVEK R+LRISAD
Sbjct: 121 ISALQSYKQALADNNGAQIVEIESYLKSIEDEKLAVERKLESLTEELSVEKVRILRISAD 180

Query: 213 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 272
           FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK
Sbjct: 181 FDNFRKRTERERLSLVKNAQGEVVETLLGVLDNFERARAQIKVETEGEEKINQSYQSIYK 240

Query: 273 QFTEILGSLGVVPVETIGKPFDPLV 296
           QFTEILGSLGVVPVETIGKPFDPL+
Sbjct: 241 QFTEILGSLGVVPVETIGKPFDPLL 265

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q7NDP11.5e-1840.29Protein GrpE OS=Gloeobacter violaceus (strain ATCC 29082 / PCC 7421) OX=251221 G... [more]
Q599783.8e-1734.54Protein GrpE OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=grpE ... [more]
Q8DJB34.9e-1732.95Protein GrpE OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=grpE PE... [more]
A9B9L46.4e-1734.18Protein GrpE OS=Prochlorococcus marinus (strain MIT 9211) OX=93059 GN=grpE PE=3 ... [more]
A2BTV41.9e-1629.74Protein GrpE OS=Prochlorococcus marinus (strain MIT 9515) OX=167542 GN=grpE PE=3... [more]
Match NameE-valueIdentityDescription
KAE8649656.11.48e-16799.62hypothetical protein Csa_012583 [Cucumis sativus][more]
XP_004144308.13.96e-16799.24uncharacterized protein LOC101213532 [Cucumis sativus][more]
XP_008455767.11.38e-16096.59PREDICTED: protein GrpE [Cucumis melo] >KAA0043664.1 protein GrpE [Cucumis melo ... [more]
XP_038883543.11.20e-15092.05protein GrpE isoform X2 [Benincasa hispida][more]
XP_038883542.13.14e-15091.70protein GrpE isoform X1 [Benincasa hispida][more]
Match NameE-valueIdentityDescription
A0A0A0L2291.92e-16799.24GrpE protein homolog OS=Cucumis sativus OX=3659 GN=Csa_4G417510 PE=3 SV=1[more]
A0A5D3CEQ06.68e-16196.59GrpE protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447... [more]
A0A1S3C2C66.68e-16196.59GrpE protein homolog OS=Cucumis melo OX=3656 GN=LOC103495867 PE=3 SV=1[more]
A0A6J1DNZ15.17e-14085.61uncharacterized protein LOC111021782 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1GD856.63e-14086.04GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111453132 PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 65..85
NoneNo IPR availableCOILSCoilCoilcoord: 145..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..335
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..327
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..114
NoneNo IPR availablePANTHERPTHR21237:SF27GRPE PROTEIN HOMOLOGcoord: 1..325
IPR000740GrpE nucleotide exchange factorPRINTSPR00773GRPEPROTEINcoord: 174..190
score: 48.53
coord: 284..303
score: 47.97
coord: 202..217
score: 41.99
coord: 257..272
score: 48.05
IPR000740GrpE nucleotide exchange factorPFAMPF01025GrpEcoord: 149..304
e-value: 5.8E-44
score: 149.7
IPR000740GrpE nucleotide exchange factorPANTHERPTHR21237GRPE PROTEINcoord: 1..325
IPR000740GrpE nucleotide exchange factorPROSITEPS01071GRPEcoord: 260..303
IPR000740GrpE nucleotide exchange factorHAMAPMF_01151GrpEcoord: 76..305
score: 18.026772
IPR000740GrpE nucleotide exchange factorCDDcd00446GrpEcoord: 170..303
e-value: 2.05298E-51
score: 164.987
IPR009012GrpE nucleotide exchange factor, headGENE3D2.30.22.10Head domain of nucleotide exchange factor GrpEcoord: 249..304
e-value: 1.6E-18
score: 68.4
IPR009012GrpE nucleotide exchange factor, headSUPERFAMILY51064Head domain of nucleotide exchange factor GrpEcoord: 251..306
IPR013805GrpE nucleotide exchange factor, coiled-coilGENE3D3.90.20.20coord: 133..246
e-value: 1.3E-22
score: 81.6
IPR013805GrpE nucleotide exchange factor, coiled-coilSUPERFAMILY58014Coiled-coil domain of nucleotide exchange factor GrpEcoord: 155..249

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G7974.T1Cucsat.G7974.T1mRNA
Cucsat.G7974.T2Cucsat.G7974.T2mRNA
Cucsat.G7974.T4Cucsat.G7974.T4mRNA
Cucsat.G7974.T5Cucsat.G7974.T5mRNA
Cucsat.G7974.T6Cucsat.G7974.T6mRNA
Cucsat.G7974.T3Cucsat.G7974.T3mRNA
Cucsat.G7974.T7Cucsat.G7974.T7mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
biological_process GO:0030150 protein import into mitochondrial matrix
cellular_component GO:0009507 chloroplast
cellular_component GO:0001405 PAM complex, Tim23 associated import motor
molecular_function GO:0000774 adenyl-nucleotide exchange factor activity
molecular_function GO:0051087 chaperone binding
molecular_function GO:0042803 protein homodimerization activity
molecular_function GO:0051082 unfolded protein binding