Cucsat.G7384 (gene) Cucumber (B10) v3

Overview
NameCucsat.G7384
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionChlorophyll a-b binding protein, chloroplastic
Locationctg1528: 730519 .. 732424 (+)
RNA-Seq ExpressionCucsat.G7384
SyntenyCucsat.G7384
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATATCCACGTGGAGAGTTGTAGTTGGATTGTAAGATCCCAACCCAATCTAAAACATGGGACACTCCAAATCTCAACCATAATTTGGATTCTAAAATCTCCCTCTCTTCAACCTCTTAGCTTATCTTATTCTTTCCCATTTCCATTTTATGATTCCTATTTCTAATTCTCAGCTCTCACATCACCACTTCACCAACCCTCTCTCCAAATACAAAGCCTAATATGGCCACTCAGGCTCTTGTTTCTTCTTCTTTAACCTCTTCAGTGGGTGCTGCCAGACAGAGATTAGGGGCAAGGCCTTCTTTTGGATCTTCCAGGAAATCAGCTTCTTTTGTTGTTAGAGCTGAAGCCACTCCTCCTGTTAAGGTTGCTTTTCTTTTCCTTTCTTTCTTTTTTATCTATTGTCTTGCGTGTGGGTTGTTGACTCACCAAGTTTAATATGGTTATTATAGTGGAAAGATCTTGTGTTCAATGAGTTTTTCTACTTTTCAAGCTCTGCATCTAAAAGAGTGTTTAGAATGTAAATTTATGTTTCTTTTGTTCTAAATCTATACTATGGTTCTGACGTTTGTTGGTGAAAGACTTGAATTCTTACTTCCATCCATCCTAACAACAAAAACATTTGAGAGCTACTGTCTTTTTAATTTTTGAATTTCAGTTTGGTATTTTAAAACATTTATAGAAAATGGACAACAAAACCAAGAGACGTACAGGTGAAGTAGTAGTTATAAATTATAATTTTAAAACTAAAAAACTAATCGTCACCAGAGTCTTAATTTAGTTTTTGAGTAGTGATTGAGCAGGGGCTCATTATTGAAGAAGGGAGAAATAACTTCTTTCTACTTTCTCCTAGTTCAAATCGTATTCGGGTTAAGTAGTTTAGTTGCAACTTGTGAGATTTATTATTGTTATTATTGCAGCAAGGAGCAGACAGGCAACTCTGGTTCGCTTCAAAACAAAGTCTTTCTTACTTGGATGGAAGGTATTACAAAAAGTTCTATCACTTCTTATTATTTTTCATATTCTAAGTAACAATAATCTTATCAAATAAAGGTTTAAAATAAACCATCTTCTTAAAGTCAAAAAGCTTTTCTACAAATTTAAACTAAGTTACTGGGTGATAATTTGAATTACTTTGGTGGTTTTGATTTAGTCTGCCAGGCGATTTCGGGTTTGACCCACTGGGGCTATCTGATCCCGAAGGCACAGGAGGGTTCATCGAGCCAAGATGGTTGGCATACGGCGAAGTGATCAACGGAAGGTTTGCAATGTTGGGAGCAGCAGGAGCCATAGCCCCAGAAATCTTTGGATCACTGGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACAGGGGTCATCCCACCAGCAGGGACCTACAACTATTGGGCAGACCCTTACACACTCTTTGTATTTGAAATGGCTCTGATGGGCTTTGCTGAACACAGAAGATTTCAAGATTGGGCCAAGCCAGGGTCCATGGGAAAACAATACTTTTTGGGCCTGGAGAAGTTCTTGGGTGGATCAGGGGACCCAGCTTACCCTGGCGGGCCATTGTTCAACCCACTAGGGTTTGGGAAAGATGAGAAGTCAATGAAGGAATTGAAGTTGAAGGAAATTAAGAATGGAAGGCTTGCAATGTTGGCAATTTTGGGTTACTTTATACAAGGTCTTGTTACTGGTGTTGGACCTTACCAAAACCTTTTGGATCATTTGTCTGACCCTGTCAACAACAATGTTTTGACCAGCCTTAAATTCCACTAGAAGGGTTTATATGTGAATTGTAATTTGTGTAATGTATATTAATATGGATCACAATCCCCTTTGGGTTGCTTTGGAGCTTTCAAAAATTGTTTCCCCCCACTCTATTGTAACATGATTTGAGGAAAAACTTTTCTCTAATATTTTGCATCTTCCTGGATCTTTCTAAGAGTATGGACATATATATTACATATTACGTGGATTTAAAAATTGGTATAAGATTCTATAAGATATTTTATGAGGAAACAAATGTTAGTCACATGCTAATAGAACTATTATAAAGTAGAAAAAAGAGTTAAAAAACAGGA

Coding sequence (CDS)

ATGGCCACTCAGGCTCTTGTTTCTTCTTCTTTAACCTCTTCAGTGGGTGCTGCCAGACAGAGATTAGGGGCAAGGCCTTCTTTTGGATCTTCCAGGAAATCAGCTTCTTTTGTTGTTAGAGCTGAAGCCACTCCTCCTGTTAAGCAAGGAGCAGACAGGCAACTCTGGTTCGCTTCAAAACAAAGTCTTTCTTACTTGGATGGAAGTCTGCCAGGCGATTTCGGGTTTGACCCACTGGGGCTATCTGATCCCGAAGGCACAGGAGGGTTCATCGAGCCAAGATGGTTGGCATACGGCGAAGTGATCAACGGAAGGTTTGCAATGTTGGGAGCAGCAGGAGCCATAGCCCCAGAAATCTTTGGATCACTGGGGTTAATCCCACCAGAAACAGCCCTCCCATGGTTCAAAACAGGGGTCATCCCACCAGCAGGGACCTACAACTATTGGGCAGACCCTTACACACTCTTTGTATTTGAAATGGCTCTGATGGGCTTTGCTGAACACAGAAGATTTCAAGATTGGGCCAAGCCAGGGTCCATGGGAAAACAATACTTTTTGGGCCTGGAGAAGTTCTTGGGTGGATCAGGGGACCCAGCTTACCCTGGCGGGCCATTGTTCAACCCACTAGGGTTTGGGAAAGATGAGAAGTCAATGAAGGAATTGAAGTTGAAGGAAATTAAGAATGGAAGGCTTGCAATGTTGGCAATTTTGGGTTACTTTATACAAGGTCTTGTTACTGGTGTTGGACCTTACCAAAACCTTTTGGATCATTTGTCTGACCCTGTCAACAACAATGTTTTGACCAGCCTTAAATTCCACTAG

Protein sequence

MATQALVSSSLTSSVGAARQRLGARPSFGSSRKSASFVVRAEATPPVKQGADRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEVINGRFAMLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Homology
[Close]
BLAST of Cucsat.G7384 vs. ExPASy Swiss-Prot
Match: P27522 (Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CAB8 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 3.9e-87
Identity = 155/166 (93.37%), Postives = 157/166 (94.58%), Query Frame = 0 

Query: 1   MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE 60
           MLGAAGAIAPEI G  GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFV EMALMGFAE
Sbjct: 108 MLGAAGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAE 167

Query: 61  HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 120
           HRRFQDWAKPGSMGKQYFLGLEK LGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK
Sbjct: 168 HRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 227

Query: 121 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 167
           NGRLAMLAILGYFIQ LVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Sbjct: 228 NGRLAMLAILGYFIQALVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273

[Close]
BLAST of Cucsat.G7384 vs. ExPASy Swiss-Prot
Match: Q32904 (Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum OX=3888 GN=lhca3 PE=1 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.1e-84
Identity = 148/166 (89.16%), Postives = 155/166 (93.37%), Query Frame = 0 

Query: 1   MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE 60
           MLGA GAIAPE  G +GLIP ETAL WF+TGVIPPAGTYNYWAD YTLFV EMALMGFAE
Sbjct: 110 MLGAVGAIAPEYLGKVGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAE 169

Query: 61  HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 120
           HRRFQDWAKPGSMGKQYFLGLEK  GGSG+PAYPGGP FNPLGFGKDEKS+KELKLKE+K
Sbjct: 170 HRRFQDWAKPGSMGKQYFLGLEKGFGGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVK 229

Query: 121 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 167
           NGRLAMLAILGYFIQGLVTGVGPYQNLLDH++DPVNNNVLTSLKFH
Sbjct: 230 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHVADPVNNNVLTSLKFH 275

[Close]
BLAST of Cucsat.G7384 vs. ExPASy Swiss-Prot
Match: Q9SY97 (Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA3 PE=1 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 6.9e-84
Identity = 148/166 (89.16%), Postives = 153/166 (92.17%), Query Frame = 0 

Query: 1   MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE 60
           MLGAAGAIAPEI G  GLIP ETALPWF+TGVIPPAGTY YWAD YTLFV EMALMGFAE
Sbjct: 108 MLGAAGAIAPEILGKAGLIPAETALPWFQTGVIPPAGTYTYWADNYTLFVLEMALMGFAE 167

Query: 61  HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 120
           HRR QDW  PGSMGKQYFLGLEK L GSG+PAYPGGP FNPLGFGKDEKS+KELKLKE+K
Sbjct: 168 HRRLQDWYNPGSMGKQYFLGLEKGLAGSGNPAYPGGPFFNPLGFGKDEKSLKELKLKEVK 227

Query: 121 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 167
           NGRLAMLAILGYFIQGLVTGVGPYQNLLDHL+DPVNNNVLTSLKFH
Sbjct: 228 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273

[Close]
BLAST of Cucsat.G7384 vs. ExPASy Swiss-Prot
Match: Q9C639 (Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA5 PE=1 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.0e-30
Identity = 73/166 (43.98%), Postives = 105/166 (63.25%), Query Frame = 0 

Query: 1   MLGAAGAIAPEIFGSLGLIPPETALP-WFKTGVIPPAGTYNYWADPYTLFVFEMALMGFA 60
           MLG AG +  ++  + G+      LP W++ G +     +++ A   TL V +  LMGFA
Sbjct: 96  MLGVAGILFTDLLRTTGI----RNLPVWYEAGAV----KFDF-ASTKTLIVVQFLLMGFA 155

Query: 61  EHRRFQDWAKPGSMGKQ--YFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLK 120
           E +R+ D+  PGS  K+  +F GLE  L G  +P YPGGPL NPLG  KD ++  + KLK
Sbjct: 156 ETKRYMDFVSPGSQAKEGSFFFGLEAALEGL-EPGYPGGPLLNPLGLAKDVQNAHDWKLK 215

Query: 121 EIKNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSL 164
           EIKNGRLAM+A+LG+F+Q  VT  GP  NL++HLS+P +  ++ +L
Sbjct: 216 EIKNGRLAMMAMLGFFVQASVTHTGPIDNLVEHLSNPWHKTIIQTL 251

[Close]
BLAST of Cucsat.G7384 vs. ExPASy Swiss-Prot
Match: Q9SYW8 (Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA2 PE=1 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.9e-26
Identity = 69/155 (44.52%), Postives = 90/155 (58.06%), Query Frame = 0 

Query: 1   MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE 60
           MLGAAG   PE    +G++   +   W+       AG   Y+ D  TLFV E+ L+G+AE
Sbjct: 102 MLGAAGIFIPEFLTKIGILNTPS---WY------TAGEQEYFTDKTTLFVVELILIGWAE 161

Query: 61  HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKS-MKELKLKEI 120
            RR+ D  KPGS+         K  G   D  YPGG  F+PLG+G    + +KEL+ KEI
Sbjct: 162 GRRWADIIKPGSVNTDPVFPNNKLTG--TDVGYPGGLWFDPLGWGSGSPAKLKELRTKEI 221

Query: 121 KNGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDP 155
           KNGRLAMLA++G + Q + TG GP  NL  HL+DP
Sbjct: 222 KNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADP 245

[Close]
BLAST of Cucsat.G7384 vs. NCBI nr
Match: XP_004139075.1 (chlorophyll a-b binding protein 8, chloroplastic [Cucumis sativus] >KGN66578.1 hypothetical protein Csa_006962 [Cucumis sativus])

HSP 1 Score: 344 bits (883), Expect = 5.31e-118
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0 

Query: 1   MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE 60
           MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE
Sbjct: 108 MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE 167

Query: 61  HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 120
           HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK
Sbjct: 168 HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 227

Query: 121 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 166
           NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 228 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 273

[Close]
BLAST of Cucsat.G7384 vs. NCBI nr
Match: XP_008450298.1 (PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Cucumis melo] >TYK28122.1 chlorophyll a-b binding protein 8 [Cucumis melo var. makuwa])

HSP 1 Score: 342 bits (876), Expect = 6.18e-117
Identity = 164/166 (98.80%), Postives = 165/166 (99.40%), Query Frame = 0 

Query: 1   MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE 60
           MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAE
Sbjct: 108 MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAE 167

Query: 61  HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 120
           HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK
Sbjct: 168 HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 227

Query: 121 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 166
           NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Sbjct: 228 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNILTSLKFH 273

[Close]
BLAST of Cucsat.G7384 vs. NCBI nr
Match: XP_038879830.1 (photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic [Benincasa hispida])

HSP 1 Score: 341 bits (875), Expect = 8.77e-117
Identity = 162/166 (97.59%), Postives = 166/166 (100.00%), Query Frame = 0 

Query: 1   MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE 60
           MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE
Sbjct: 108 MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE 167

Query: 61  HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 120
           HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKS+K+LKLKE+K
Sbjct: 168 HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSLKDLKLKEVK 227

Query: 121 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 166
           NGRLAMLAILGYF+QGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 228 NGRLAMLAILGYFVQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 273

[Close]
BLAST of Cucsat.G7384 vs. NCBI nr
Match: XP_022933380.1 (chlorophyll a-b binding protein 8, chloroplastic [Cucurbita moschata] >KAG6588241.1 Chlorophyll a-b binding protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022157.1 Chlorophyll a-b binding protein 8, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 340 bits (872), Expect = 2.60e-116
Identity = 164/166 (98.80%), Postives = 164/166 (98.80%), Query Frame = 0 

Query: 1   MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE 60
           MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE
Sbjct: 109 MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE 168

Query: 61  HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 120
           HRRFQDW  PGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK
Sbjct: 169 HRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 228

Query: 121 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 166
           NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 229 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274

[Close]
BLAST of Cucsat.G7384 vs. NCBI nr
Match: XP_023006167.1 (chlorophyll a-b binding protein 8, chloroplastic [Cucurbita maxima] >XP_023531157.1 chlorophyll a-b binding protein 8, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 338 bits (866), Expect = 2.13e-115
Identity = 163/166 (98.19%), Postives = 163/166 (98.19%), Query Frame = 0 

Query: 1   MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE 60
           MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAE
Sbjct: 109 MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAE 168

Query: 61  HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 120
           HRRFQDW  PGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK
Sbjct: 169 HRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 228

Query: 121 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 166
           NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 229 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274

[Close]
BLAST of Cucsat.G7384 vs. ExPASy TrEMBL
Match: A0A0A0LXV0 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_1G630330 PE=3 SV=1)

HSP 1 Score: 344 bits (883), Expect = 2.57e-118
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0 

Query: 1   MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE 60
           MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE
Sbjct: 108 MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE 167

Query: 61  HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 120
           HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK
Sbjct: 168 HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 227

Query: 121 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 166
           NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 228 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 273

[Close]
BLAST of Cucsat.G7384 vs. ExPASy TrEMBL
Match: A0A5D3DX73 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00280 PE=3 SV=1)

HSP 1 Score: 342 bits (876), Expect = 2.99e-117
Identity = 164/166 (98.80%), Postives = 165/166 (99.40%), Query Frame = 0 

Query: 1   MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE 60
           MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAE
Sbjct: 108 MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAE 167

Query: 61  HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 120
           HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK
Sbjct: 168 HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 227

Query: 121 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 166
           NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Sbjct: 228 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNILTSLKFH 273

[Close]
BLAST of Cucsat.G7384 vs. ExPASy TrEMBL
Match: A0A1S3BPK7 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491949 PE=3 SV=1)

HSP 1 Score: 342 bits (876), Expect = 2.99e-117
Identity = 164/166 (98.80%), Postives = 165/166 (99.40%), Query Frame = 0 

Query: 1   MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE 60
           MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAE
Sbjct: 108 MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAE 167

Query: 61  HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 120
           HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK
Sbjct: 168 HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 227

Query: 121 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 166
           NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNN+LTSLKFH
Sbjct: 228 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNILTSLKFH 273

[Close]
BLAST of Cucsat.G7384 vs. ExPASy TrEMBL
Match: A0A6J1F4Q9 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111440812 PE=3 SV=1)

HSP 1 Score: 340 bits (872), Expect = 1.26e-116
Identity = 164/166 (98.80%), Postives = 164/166 (98.80%), Query Frame = 0 

Query: 1   MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE 60
           MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE
Sbjct: 109 MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE 168

Query: 61  HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 120
           HRRFQDW  PGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK
Sbjct: 169 HRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 228

Query: 121 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 166
           NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 229 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274

[Close]
BLAST of Cucsat.G7384 vs. ExPASy TrEMBL
Match: A0A6J1KV56 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111498983 PE=3 SV=1)

HSP 1 Score: 338 bits (866), Expect = 1.03e-115
Identity = 163/166 (98.19%), Postives = 163/166 (98.19%), Query Frame = 0 

Query: 1   MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAE 60
           MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFV EMALMGFAE
Sbjct: 109 MLGAAGAIAPEIFGSLGLIPPETALPWFKTGVIPPAGTYNYWADPYTLFVLEMALMGFAE 168

Query: 61  HRRFQDWAKPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 120
           HRRFQDW  PGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK
Sbjct: 169 HRRFQDWYNPGSMGKQYFLGLEKFLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIK 228

Query: 121 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 166
           NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH
Sbjct: 229 NGRLAMLAILGYFIQGLVTGVGPYQNLLDHLSDPVNNNVLTSLKFH 274

The following BLAST results are available for this feature:
BLAST of Cucsat.G7384 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P275223.9e-8793.37Chlorophyll a-b binding protein 8, chloroplastic OS=Solanum lycopersicum OX=4081... [more]
Q329041.1e-8489.16Chlorophyll a-b binding protein 3, chloroplastic OS=Pisum sativum OX=3888 GN=lhc... [more]
Q9SY976.9e-8489.16Photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic OS=Arabidopsis ... [more]
Q9C6392.0e-3043.98Photosystem I chlorophyll a/b-binding protein 5, chloroplastic OS=Arabidopsis th... [more]
Q9SYW83.9e-2644.52Photosystem I chlorophyll a/b-binding protein 2, chloroplastic OS=Arabidopsis th... [more]
BLAST of Cucsat.G7384 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139075.15.31e-118100.00chlorophyll a-b binding protein 8, chloroplastic [Cucumis sativus] >KGN66578.1 h... [more]
XP_008450298.16.18e-11798.80PREDICTED: chlorophyll a-b binding protein 8, chloroplastic [Cucumis melo] >TYK2... [more]
XP_038879830.18.77e-11797.59photosystem I chlorophyll a/b-binding protein 3-1, chloroplastic [Benincasa hisp... [more]
XP_022933380.12.60e-11698.80chlorophyll a-b binding protein 8, chloroplastic [Cucurbita moschata] >KAG658824... [more]
XP_023006167.12.13e-11598.19chlorophyll a-b binding protein 8, chloroplastic [Cucurbita maxima] >XP_02353115... [more]
BLAST of Cucsat.G7384 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXV02.57e-118100.00Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa... [more]
A0A5D3DX732.99e-11798.80Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11... [more]
A0A1S3BPK72.99e-11798.80Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103... [more]
A0A6J1F4Q91.26e-11698.80Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1KV561.03e-11598.19Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022796Chlorophyll A-B binding proteinPFAMPF00504Chloroa_b-bindcoord: 64..242
e-value: 1.6E-46
score: 158.8
IPR023329Chlorophyll a/b binding domain superfamilyGENE3D1.10.3460.10Chlorophyll a/b binding protein domaincoord: 54..272
e-value: 8.5E-66
score: 223.6
IPR001344Chlorophyll A-B binding protein, plant and chromistaPANTHERPTHR21649CHLOROPHYLL A/B BINDING PROTEINcoord: 1..272
NoneNo IPR availablePANTHERPTHR21649:SF120CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTICcoord: 1..272
NoneNo IPR availableSUPERFAMILY103511Chlorophyll a-b binding proteincoord: 52..269

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G7384.T1Cucsat.G7384.T1mRNA
Cucsat.G7384.T2Cucsat.G7384.T2mRNA
Cucsat.G7384.T3Cucsat.G7384.T3mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009768 photosynthesis, light harvesting in photosystem I
biological_process GO:0018298 protein-chromophore linkage
biological_process GO:0009416 response to light stimulus
biological_process GO:0009765 photosynthesis, light harvesting
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009522 photosystem I
cellular_component GO:0009523 photosystem II
cellular_component GO:0016020 membrane
molecular_function GO:0016168 chlorophyll binding
molecular_function GO:0046872 metal ion binding