Cucsat.G7282 (gene) Cucumber (B10) v3

Overview
NameCucsat.G7282
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptiondormancy-associated protein homolog 3-like isoform X2
Locationctg1528: 5008744 .. 5010141 (-)
RNA-Seq ExpressionCucsat.G7282
SyntenyCucsat.G7282
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGATCCAGATTCTCTCCCAATGCTACTAACAAACTTGTTCGTCGTTTCATCACATTCCCATTCCCTCTTTATATAACTTCACACCGTTCTCCCCTCTCCCTTCTTCTCTGTAAACCCTTCCGTTGATTGATCCCAATTTCCTCTCTCTACCTTCCGCCGCGAATTACTCTTAAGTCCGCCCTCGCCGTCGTAGCGTTGTTGGCGATGGGACTATTGGATCAGCTCTGGGATGACACGCTTGCCGGACCGACCCCGGATTCCGGCCTCGGCAAGCTCAGGAAGCACCCATCTCTCACTTCCCGATCCGCCGCCGTGAAGGGTATGCCACAGCGGACCCATAAGTTCTAACCATTCATTTCATTAAAAAGTTTCGTTCTTTTTTTAATACCAAACAGTTTAGTAAGTACTTGACCTTAACAACTAAATATCTGATCTCTTACTTTCTAAAACTTTCAAGATTTGTAACAATTTAGTGACTTAATATGCTATGTTTTATAATTTAAATACAAATACTGTTTATTTTCATATTGCTTACTGGTTTTTACACTTTACACTCCTCTCCGATCCCCTTTTCCTCTAAGACTGTTATATAATTCAGATTAAGTTGGTCCATAGTTCATTACAAACCCTCATACAATAAACTATGGACCCCATATTACTCTAAAACAACAAACTATGGACAATAATTACTAACTATATGTCATGACAGTCCGGACTTAATTGTTATACATTTAAAAGTCCAGTTACTAGCAGAACGATTATTATCTTGGGACGTTGAGTTGACTAGCTATAAGAAGCTCTAACAAAAAACTAAAAGAAAGAAGAGAGCTAGATTTGAAACAATAATAATACGAAAAGTTTAATTATCTCTGTTGCTAATTTGGGAGCAGAATCCTCCAATGGGAAGAGGTACGAGGAAGGAGTAGTAATGTCGTCATCGTCCTCGGAGGATAGTGTGAAAGTTTCTCGGAGGATTATGATCGTAAAGCCACCTGGTGGTTACCAGTATGGTTCACCGCCGGTGTCGCCTGCCGCCTCTTCCACTCCACCGTCATCTCCTTTTTCCGGTAAGTTTCCCAACCACCGTTCCATGATATGCCACTCTAAGTTAAGTATATGTGTGGCTTTTGATTACGTCTTTTTGTGGGGTTTGTGAGCTGTGCCCTTCTCATTGGGCATTCCATTAATCCTAAGTTCTAATAATAATTTTAATTCAATATGTATTGATTATTGTTATTATGAAATGACTATTCTACCCCTCCTTTGTACCTACAAATAATAATGCATTATTCCCAAATTGCCCATACTCTCTTTTTTTGATGTGAAACAAAATATTTCTTTCAATTTCACTCCTACTATGTTTAGCTATGTATATATATACAAACTTTATTCATCAAATTAAAACTTGCCCTAACATGGATTATTTTCTTTTTTCTTTTTTGTTAACTTCAATAATTATAGTCTATAGTGTGAACCATTAATTTTTGAGGTGGTAATTATTAGGGGAAAAAAATTAAACTATTGAAATACAAATTGTTTAAATTAGTATGTTATAGGAAATATGAGTGTATTATCTAAAAGAAAGAGGGAGATATTGTGTTTTCTTTAAGCATTTTATTTTTGTATGCATTTGTCTTGTAATTTTAATATGTAGGGATAGGGGTTGAGATTTGATTCTTGATATATATTTGTTTGATCGGTCATGAAGGTAATTATTTTTAATAAGTTGAATTGCATCTTAGTGGATCTTGATAAGGGTGGTTTCTTCTTTTTCAATGTGGGGACGAATCTATTTTGTATTTAATGAATCTTTTAATTATGCCCACAAGGCTACTTGATGTTGATTTTTCTAGACATAGATTCATCTACTGTAATTATTTGATGAAAGTAATAAATGTGATTTAAAAAACGATTATGCAACAAGTCAATATTAACATGGTTGGTTCGGTTGTGTTATTACTTACGGAGGTAGAGAATCATTTAGATTTCGAAGAAGATCGACATCGGACGCTTATGGGAAGACGACAAGTGAAGTCGGAGCTCGGACTCCTACTTCTCCTTTTGACATGTGAGATATGACAGTGATATCAACTCGATCATAATCTTCGGCCCCAAAACTTTGGATGAGATCAATGACGAGTGAAAATCCTTGTATCTTTTAGGGTTTGCTTAATAATGTCTATAGCTTTTTGTCGAGAAACGTTGAAAGACTTTAGTGAGCCCGTTCGAATTACATAGGTGTGCTTTGGTCATATAATAGATGTGTAGGTTTGTCGTCCCGTGGCCTGCTGAGAATAATTATAGGAAAGGATTTTGTTTGTGTGGTCTTCATGTTCTTTTGTGTATGGTTTGTAGTTTTATCACTTGTAGTAATATCTCTCAGTTGACAATGATGGTGTCTTTACTTTGTGTAAAAGAGAGACCAACATTTTCCTTTTACCTATTTTTTCTGTTTAATTCATCATAATTTTGAGTTATAGTTTAAA

Coding sequence (CDS)

ATGGGACTATTGGATCAGCTCTGGGATGACACGCTTGCCGGACCGACCCCGGATTCCGGCCTCGGCAAGCTCAGGAAGCACCCATCTCTCACTTCCCGATCCGCCGCCGTGAAGGAATCCTCCAATGGGAAGAGGTACGAGGAAGGAGTAGTAATGTCGTCATCGTCCTCGGAGGATAGTGTGAAAGTTTCTCGGAGGATTATGATCGTAAAGCCACCTGGTGGTTACCAGTATGGTTCACCGCCGGTGTCGCCTGCCGCCTCTTCCACTCCACCGTCATCTCCTTTTTCCGATTTCGAAGAAGATCGACATCGGACGCTTATGGGAAGACGACAAGTGAAGTCGGAGCTCGGACTCCTACTTCTCCTTTTGACATGTGAGATATGA

Protein sequence

MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDSVKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSDFEEDRHRTLMGRRQVKSELGLLLLLLTCEI
Homology
BLAST of Cucsat.G7282 vs. ExPASy Swiss-Prot
Match: Q8LD26 (Dormancy-associated protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g56220 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.2e-17
Identity = 54/100 (54.00%), Postives = 68/100 (68.00%), Query Frame = 0

Query: 1  MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAA---VKESSNGKRYEEGVVMSSSSS 60
          MGLLD LWDDT+AGP P++GLGKLRKH + + R ++     E+ + + Y E      S  
Sbjct: 1  MGLLDHLWDDTVAGPRPENGLGKLRKHHTFSFRPSSGNDQSEAGSARSYGE-----DSLP 60

Query: 61 EDSVKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFS 98
          E++VKV+R IMI+KPP GYQ  S P SP A STPP SPFS
Sbjct: 61 EEAVKVTRSIMIIKPP-GYQGSSAPASP-AGSTPPLSPFS 93

BLAST of Cucsat.G7282 vs. ExPASy Swiss-Prot
Match: F4HV65 (Dormancy-associated protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g54070 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.8e-08
Identity = 42/105 (40.00%), Postives = 55/105 (52.38%), Query Frame = 0

Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MG L +LWD+T+AGPTPD+GLGKLRKH SL++                  V SS  S  S
Sbjct: 1   MGFLHKLWDETVAGPTPDNGLGKLRKHDSLST------------------VRSSPPSLSS 60

Query: 61  VKVSRRIMIVK----PPGGYQYGSPPVSPAASSTPPSSPFSGKFP 102
            +V+R IM+ K      G  +    P SP  SS+ P +P +   P
Sbjct: 61  DQVTRSIMVTKGNNNVRGLRKLKMDPDSPTCSSSNPGTPLTPGTP 87

BLAST of Cucsat.G7282 vs. NCBI nr
Match: XP_004135608.1 (dormancy-associated protein homolog 3 isoform X1 [Cucumis sativus] >KGN66063.1 hypothetical protein Csa_006915 [Cucumis sativus])

HSP 1 Score: 192 bits (488), Expect = 1.26e-60
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0

Query: 1  MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
          MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS
Sbjct: 1  MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60

Query: 61 VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSGK 99
          VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSG+
Sbjct: 61 VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSGR 99

BLAST of Cucsat.G7282 vs. NCBI nr
Match: XP_011659889.1 (dormancy-associated protein homolog 3 isoform X2 [Cucumis sativus])

HSP 1 Score: 189 bits (481), Expect = 1.34e-59
Identity = 99/108 (91.67%), Postives = 103/108 (95.37%), Query Frame = 0

Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS
Sbjct: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60

Query: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSG-KFPNHRSMI 107
           VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFS  +   HR+++
Sbjct: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSDFEEDRHRTLM 108

BLAST of Cucsat.G7282 vs. NCBI nr
Match: XP_008450631.1 (PREDICTED: dormancy-associated protein homolog 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 173 bits (438), Expect = 6.32e-53
Identity = 91/105 (86.67%), Postives = 96/105 (91.43%), Query Frame = 0

Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSS--- 60
           MGLLDQLWDDTLAGPTPDSGLGKLRKHPS TSRSAA KES+NGKRYEEG+++SSSSS   
Sbjct: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSFTSRSAAAKESNNGKRYEEGIMLSSSSSAAA 60

Query: 61  --EDSVKVSRRIMIVKPPGGYQYGS-PPVSPAASSTPPSSPFSGK 99
             ED VKVSRRIMIVKPPGGYQYGS PPVSPAASSTPPSSPFSG+
Sbjct: 61  AAEDGVKVSRRIMIVKPPGGYQYGSSPPVSPAASSTPPSSPFSGR 105

BLAST of Cucsat.G7282 vs. NCBI nr
Match: XP_016900948.1 (PREDICTED: dormancy-associated protein homolog 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 170 bits (430), Expect = 1.08e-51
Identity = 90/103 (87.38%), Postives = 94/103 (91.26%), Query Frame = 0

Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSS--- 60
           MGLLDQLWDDTLAGPTPDSGLGKLRKHPS TSRSAA KES+NGKRYEEG+++SSSSS   
Sbjct: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSFTSRSAAAKESNNGKRYEEGIMLSSSSSAAA 60

Query: 61  --EDSVKVSRRIMIVKPPGGYQYGS-PPVSPAASSTPPSSPFS 97
             ED VKVSRRIMIVKPPGGYQYGS PPVSPAASSTPPSSPFS
Sbjct: 61  AAEDGVKVSRRIMIVKPPGGYQYGSSPPVSPAASSTPPSSPFS 103

BLAST of Cucsat.G7282 vs. NCBI nr
Match: TYK10254.1 (dormancy-associated protein-like protein 3-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 164 bits (416), Expect = 1.76e-49
Identity = 90/112 (80.36%), Postives = 96/112 (85.71%), Query Frame = 0

Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVK-------ESSNGKRYEEGVVMS 60
           MGLLDQLWDDTLAGPTPDSGLGKLRKHPS TSRSAA K       +S+NGKRYEEG+++S
Sbjct: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSFTSRSAAAKGMPQRTIKSNNGKRYEEGIMLS 60

Query: 61  SSSS-----EDSVKVSRRIMIVKPPGGYQYGS-PPVSPAASSTPPSSPFSGK 99
           SSSS     ED VKVSRRIMIVKPPGGYQYGS PPVSPAASSTPPSSPFSG+
Sbjct: 61  SSSSAAAAAEDGVKVSRRIMIVKPPGGYQYGSSPPVSPAASSTPPSSPFSGR 112

BLAST of Cucsat.G7282 vs. ExPASy TrEMBL
Match: A0A0A0LWE4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569400 PE=3 SV=1)

HSP 1 Score: 192 bits (488), Expect = 6.11e-61
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 0

Query: 1  MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
          MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS
Sbjct: 1  MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60

Query: 61 VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSGK 99
          VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSG+
Sbjct: 61 VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSGR 99

BLAST of Cucsat.G7282 vs. ExPASy TrEMBL
Match: A0A1S3BPL3 (dormancy-associated protein homolog 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492161 PE=3 SV=1)

HSP 1 Score: 173 bits (438), Expect = 3.06e-53
Identity = 91/105 (86.67%), Postives = 96/105 (91.43%), Query Frame = 0

Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSS--- 60
           MGLLDQLWDDTLAGPTPDSGLGKLRKHPS TSRSAA KES+NGKRYEEG+++SSSSS   
Sbjct: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSFTSRSAAAKESNNGKRYEEGIMLSSSSSAAA 60

Query: 61  --EDSVKVSRRIMIVKPPGGYQYGS-PPVSPAASSTPPSSPFSGK 99
             ED VKVSRRIMIVKPPGGYQYGS PPVSPAASSTPPSSPFSG+
Sbjct: 61  AAEDGVKVSRRIMIVKPPGGYQYGSSPPVSPAASSTPPSSPFSGR 105

BLAST of Cucsat.G7282 vs. ExPASy TrEMBL
Match: A0A1S4DY99 (dormancy-associated protein homolog 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492161 PE=3 SV=1)

HSP 1 Score: 170 bits (430), Expect = 5.21e-52
Identity = 90/103 (87.38%), Postives = 94/103 (91.26%), Query Frame = 0

Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSS--- 60
           MGLLDQLWDDTLAGPTPDSGLGKLRKHPS TSRSAA KES+NGKRYEEG+++SSSSS   
Sbjct: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSFTSRSAAAKESNNGKRYEEGIMLSSSSSAAA 60

Query: 61  --EDSVKVSRRIMIVKPPGGYQYGS-PPVSPAASSTPPSSPFS 97
             ED VKVSRRIMIVKPPGGYQYGS PPVSPAASSTPPSSPFS
Sbjct: 61  AAEDGVKVSRRIMIVKPPGGYQYGSSPPVSPAASSTPPSSPFS 103

BLAST of Cucsat.G7282 vs. ExPASy TrEMBL
Match: A0A5D3CGD5 (Dormancy-associated protein-like protein 3-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004020 PE=3 SV=1)

HSP 1 Score: 164 bits (416), Expect = 8.51e-50
Identity = 90/112 (80.36%), Postives = 96/112 (85.71%), Query Frame = 0

Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVK-------ESSNGKRYEEGVVMS 60
           MGLLDQLWDDTLAGPTPDSGLGKLRKHPS TSRSAA K       +S+NGKRYEEG+++S
Sbjct: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSFTSRSAAAKGMPQRTIKSNNGKRYEEGIMLS 60

Query: 61  SSSS-----EDSVKVSRRIMIVKPPGGYQYGS-PPVSPAASSTPPSSPFSGK 99
           SSSS     ED VKVSRRIMIVKPPGGYQYGS PPVSPAASSTPPSSPFSG+
Sbjct: 61  SSSSAAAAAEDGVKVSRRIMIVKPPGGYQYGSSPPVSPAASSTPPSSPFSGR 112

BLAST of Cucsat.G7282 vs. ExPASy TrEMBL
Match: A0A6J1EF66 (dormancy-associated protein homolog 3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432734 PE=3 SV=1)

HSP 1 Score: 149 bits (377), Expect = 4.87e-44
Identity = 82/99 (82.83%), Postives = 85/99 (85.86%), Query Frame = 0

Query: 1  MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
          MGLLDQLWDDTLAGP PDSGLGKLRKHPS TSRS AVKES NGK YEEG   S  SSE+ 
Sbjct: 1  MGLLDQLWDDTLAGPMPDSGLGKLRKHPSFTSRSTAVKES-NGKSYEEGTPPS--SSEEP 60

Query: 61 VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSGK 99
          +KVSRRIMIVKPPG YQYGSPPVSPA SSTPP SPFSG+
Sbjct: 61 LKVSRRIMIVKPPG-YQYGSPPVSPAGSSTPPLSPFSGR 95

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q8LD264.2e-1754.00Dormancy-associated protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g562... [more]
F4HV652.8e-0840.00Dormancy-associated protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g540... [more]
Match NameE-valueIdentityDescription
XP_004135608.11.26e-6098.99dormancy-associated protein homolog 3 isoform X1 [Cucumis sativus] >KGN66063.1 h... [more]
XP_011659889.11.34e-5991.67dormancy-associated protein homolog 3 isoform X2 [Cucumis sativus][more]
XP_008450631.16.32e-5386.67PREDICTED: dormancy-associated protein homolog 3-like isoform X2 [Cucumis melo][more]
XP_016900948.11.08e-5187.38PREDICTED: dormancy-associated protein homolog 3-like isoform X1 [Cucumis melo][more]
TYK10254.11.76e-4980.36dormancy-associated protein-like protein 3-like isoform X2 [Cucumis melo var. ma... [more]
Match NameE-valueIdentityDescription
A0A0A0LWE46.11e-6198.99Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569400 PE=3 SV=1[more]
A0A1S3BPL33.06e-5386.67dormancy-associated protein homolog 3-like isoform X2 OS=Cucumis melo OX=3656 GN... [more]
A0A1S4DY995.21e-5287.38dormancy-associated protein homolog 3-like isoform X1 OS=Cucumis melo OX=3656 GN... [more]
A0A5D3CGD58.51e-5080.36Dormancy-associated protein-like protein 3-like isoform X2 OS=Cucumis melo var. ... [more]
A0A6J1EF664.87e-4482.83dormancy-associated protein homolog 3-like isoform X1 OS=Cucurbita moschata OX=3... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008406Dormancy/auxin associated proteinPFAMPF05564Auxin_repressedcoord: 7..73
e-value: 4.7E-8
score: 33.7
IPR008406Dormancy/auxin associated proteinPANTHERPTHR33565DORMANCY-ASSOCIATED PROTEIN 1coord: 1..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 113..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..131
NoneNo IPR availablePANTHERPTHR33565:SF1DORMANCY-ASSOCIATED PROTEIN HOMOLOG 3coord: 1..130

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G7282.T3Cucsat.G7282.T3mRNA
Cucsat.G7282.T1Cucsat.G7282.T1mRNA
Cucsat.G7282.T5Cucsat.G7282.T5mRNA