Cucsat.G6955 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G6955
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	far upstream element-binding protein 1
Location	ctg1522: 813376 .. 819631 (+)
RNA-Seq Expression	Cucsat.G6955
Synteny	Cucsat.G6955

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTATAAATATAAATTCCCTACGCCAAAGGCGTGGTCATTTATTGAAAGGAAACCCATCCTCTTTCTTGCCGTCCTCCGCTTTTCTCTTCTTTTAGGGTTTCTCTCTCAAACTCTTAACAATGGCTGACGAAGCTCAGTATTCATCTGCTACTGATACTCCTTCCAACAAGCGCAAGTACGATGACCAACCTCCACCCCGCCGTCCAACTGGCTTTTCCGGTCCCATCACTTCCCCTTCATCCGATTCCGCTCCCTCCTACAACAACGTCCCTCCCCCTATGGATGAGATCCAGCTCGCTAAGCAGCGTGCTCAGGAGATTGCCTCTCGCTTGATTATCTCCAGCGGTGGCGTTGGGGCTGGTGCTGGACCTGGCGTTGGAGCAGATGTCAAACGTCCGAGGGTTGAAAACGGCGGCGGGTATGACTCCTACGACAAGGGTTTTAGTTCTGGTCCAGGTGATTATTGTTTTGATTTTTTTTATCTTTGTTTGAATATTTCATGGTCTTGCGTGTTTGTCGAAGGTGTATTGATTTTCTCACGACTCAGTGAGCTTAAAGTGAGTCAGGTCTTGTATATGGGAAGAAAATAAGTGGGAACACTCGGAGAAAATCTTGTGGAGTGCTAGTTATATATTTCTTGTTCACAGGGAGTGGGTTGTGTACAAAAAGGTCCAGTGTTCGTGATTTTCTAGAAGTGGCGTGCACTTTCTTTTATTGCATTTGGAGTAGAGCATACGTAGGGGGATGAAATGAAGGTTTCTGGATTTCAGTTTAGTGGTTTAGATAGAGCTCTCTCAGTTATCAGAATGCCTATGTTCCATGTTCTTTTACCCTCGTTTCCTGTAATAATAACTTTAAAATGTGCTGGTGATGTATTACGGTTTAAAAGCAAGAATTGTGTACATGTTTGGATGCTCATTGGTGATCTTGATTTGTGTGGATGCAGACCTGAAGCCTCACATGTCAAATTCAGCCCCTTCAGCGATACCTATTTCCTATGGTTTCCAAGGGTCAAGCAAGAAAATTGAAATTCCAAATGGGAGAGTAGGCGTAATTATTGGTAAAGGTGGTGAGACGATCAAGTACCTTCAGCTCCAGTCTGGGGCAAAAATACAAGTTACTCGTGACATGGACGCAGATCCCAACTCTACTACTCGGATGGTTGAGCTAATGGGCACCCCTGATCAAATTGCCAAGGCTGAGCAGCTGATAAATGATGTTCTTTCTGAGGTTGGTCTTTTCTTAATTTTGGAATTTCATGGTGTGCCTTTGGGAGCGGCATCAATATAAGTTTGTGGTTTCCTGTTATAACGTTGACATGCCATGTAGCAATACATTGGTTTGGATGGATAATGGATTGACTACAGCCTTACCAAGTTTACAACTTTGAACTTTATTTATGGGCAATATGTTATTCATACGTCCGATGCAAAATATGATTGTAGTTGAAGATAAGACTTTTTACTTGGCTTGAAAATGTGTTTGTCTCATAAAATTTATCATTTGAAACAGGCTGAATCTGGCGGTTCTGGCATAGTATCACGAAGACTAACAGGCCCTTCAGGATCTGAGCAGTTTGTTATGAAAATTCCTAATAATAAGGTTCTCAGAAACATTTGTTTTGGAATTACCAAGTATTGCTTGTCTATCTTGGGAATGTAATTCTGTTCACTTTTTGTACTTCTGATCGTGAAAATATTAATTTTTCTAGGTTGGCTTGGTTATTGGTAAAGGTGGTGAAACAATCAAAAGTATGCAAGCTAGGACTGGAGCACGTATCCAGGTCTGTTCTATCTTTATGTGTATATATGTATATATTACATACGTCTTTTAGAAGGCTTCCCAAAGCTAACTTCCGTTCCTTTTTATTTCAATAGTGCAACTAATTTTCACTTTCTTTGGTCATGTAACATAGAACATTGTTTTGAATTTTGATTGTATGGCAATATCTACTCTTCTTTTCTGTAGGTGATACCATTGCACTTACCCCCTGGGGACACATCTACAGAAAGAACCTTACAGATTGATGGTTCAAGTGAACAGATTGAGTCAGCAAAACAGTTGGTTAATGAAGTTATCAGCGAGGTGCGTTTGCAGATCTGGGTTACATATTTATTTTGCCTTGTTGTAGTTGGAATTAATACCTGGTTAACACCTACTTCCATTTATTTTTGTGTTTATAATGATTTTTCCTGCTTGTCTTTGGTTATTTTTTATACAACTGTTGATGCAACTGTTCCATCTTATTCTGAAACTCCTTTAGTTCTATTCTCACAAAAAAAAACTCCAGTTTTATTAATTTTAGGGTTCTACCTCAACGCCAAGGTCAGCATTAAACCAGTGGTGTTGATTGGACGTTGGCATATTTGCTTTCCTTACCTTGTAGTTTACATTATGCTGTGATATGGGAGGCATCTGGTATTCATTGGCTTAAATTATACCTCCAGTTTTATTTAGAAAATGATATCTGCTTCTTGTTCTTGTTCTTTTTTTTTTTGGTATTATGTTTCTCTTTCAAATTATGTTTTCTTACACAGGCTTGTTACCTTGTTTTATTTGTTATAATTTTGTAAAATCATTCTACAACATTATGCTGCTTTTTATTTCTGGGAGGAAATAGTTGAGAAAAAATTCCCGTTTTTATGTGGTTCTGTCGGACAACTGACTCAACAAGAAATTGATTTATTTTTTTCCTTCACTAATGGTACTTCTTGGCTCTTCTTAATTTTACTCTACTAGTGTAATGGATCTTCTACAATTTCTGGCTTAAACACTATACAATATGCTCAGCATATGGTGTTCTTGTTCCTTTAACGAACTATTAATCTGCTGCTGTGTCTGCAAATCTGCAAAATCATTTATTGCTAATGCTAAATGCACTCATGCTCTGCTAATATGCATTAGCATTTTGACTACAGTAGGAAGGCTTGTTCTCTCACTGTGCTCATACTTTCGTCTTTGAGGGGGGCTCCCTTCGTAGGTCTATGGAATCAAATGCTGCTTTGTGGTTTCACTCAAGGAATTAGAAACATTGGAATATTTCAGCCTGTTATACTTTTAGATCTCTTATAGATTGAGACAGCTTTTAGGGTCTTTTACCCCTAATCGATCTGGATTTGTTATTATATCTGCAATTGTTTATTCTATATATCCACTAATGCAGAGATGGAGGACATAAGGTTCTGGGATTGGAAAGAGGTGAAATTATTTTACAGATTACTGCTTGGTAATTTTTTGAAGAGTGATTATTGTATCAGAAAGGTTCCCATTGGTGATTTGCTGGCTCCTTTGGATATTTCAGTTTATCAGTCAAATATTACTCTTATTAGGTTGTTTAGGTTATATGATATCTCTCCTATTTAAGATGTTATCAGCCCATTTGGTATTATTCTTGGTTTTATATCTAAGTGTTATATTATTGGGATTATGGCCTGTTCAACCGTCACATGTGCTTATTAATTATGTATCCTGCAACTGATATTGTTATTGGGAACTATTGTAGGGTTAGGGTTATTGGACCATTAGTGACACCAACATGGAATCCTTTATGTTGGTGTTCTCTCAACGTTGCTCTGGTATGGTTCTGAATCCCATATTATAATGATATAAAGTGATGATGTGGAGAGAAGTTGCAGGTTTATCTGTTGGATATTCAAGGTCTTTAGTAAAATTTGAAAAGTCACCTTACCATTCTATCATTCTTTTTCTGGTGGTTTACTTTGATTTGGGAGAGTTTCATCTTTTAGTCTATAAATTATTCATTTCTTAATTGTCTATTTACTGTGCGTACCATTTGTGAAATTATTTTAGTTTAATATAGGCATGCGGGTTAATTTGTTGGATAACTGTACTATGATGTATTTTTGGTACTATCATATTTTAGTGGCAACATCACCTGATCGTTCAGTGAGTCCGCCTTTGATGGATATTCCAGAAAGTCCTTTAGACTCCTGTTTTGGTTTAATTAGTTATTATTATATGTTTTCCACCAAAAAGATGAATTCTCTAATTATTAATTTTTTTACTTAAATTGACCTTAACATTGTTCTTGTAATTGAAGAATATTTTCTTGTTTCAATCTTTATGGGCTATCTTTAGTTACTTTGGAGATTATGGATCGTTTCTTACAAAGGTCTGTATATGTCAGTGTCTTCTTTTTCATCGTCCAAATTGCTTTTCAGCTTTTTTGGAAGTATTTTTCTTTACAATAATTTGCAATCAAAATTCTTTTGACTATAAAATATTTTTCACTTCATATTCTATTGGTGTCTGAAGATAGTGTATGGGGTTGTTTAGTTTTAGCTTGATATCCAACTAATTGATTATTCTATAGAAGATTTAATAATTGGGGAAGACATTGCTTTTGTTGTGCTTTGCTATGAACTTCTTTGCCTTTTGGGGCAATTAAGTTCATATATTCTGTTCTGTAAAAGCTTTTGTAGTCGTCTGGTTCTCTTTGCACCCATTCACTTCGAATAGGGAGAGGTTGAGCTTCTGCTGGAGTAACTCAATAACTCATCATCCAGTACGGTATGTTGGTGTTTTATACTCTTCCTAATGCAGTATAAGCTCCTTTAATCCCTCTACAAAACATACTGACTATGGTTTTCTTTTTGCATATCCTTGATTTCAGATTTGGCATTTTCTTTCCATTTCGCATAATGCATATGAATGTTGTGCTTTCCTCTTCTTACCATCCCCTACGTTGGTTTCTTACGTTAATTGAGAAGGATTCACCTTTGTTTTCATTTTTATGTTTAATCTCTCAGAATCGCGCGAGAAATTCAGGTATGTCAGGCGGGTATAATCAGCAAGGTTATCAAGCTCGACCCCCTTCAAGTTGGGGTCCTCCTGGGGCTCCACCAATGCAGCAGCCTAATTATGGCTATGGACAACAAGGCGGATATTCTGCTCCTTCGTCTCAGTATAACATATCACAACCTCCTTATCAGGGTTATTCCCAACCAGCATCTGGTGGATATGCTTCCAATTGGGACCAGTCTACTGTTCCGCCAAATCAACCTGCTACTCAAGGAAGTGGTTATGATTACTACGGTCAACAGGCTCCACAGCAACAACAGACAGCTGGAGGCCCTGGTGCTACCGGAGACAACAGTGGTTATAGTTATGGTCAACCACCAGCCACTACTTATAATCAACAGGGTTATTCTCAAGATGGCTATGGTGGTAATTACCATGCACCTCAGTCTGGTTATGGCCAACCGCCAACATATGATCAACAGGGTTATAGTTCTACCACAAACTATGGTAATGTGGCTAACGCCACTCAAGATGGGCTCAATTCGTATGGCTCTCAAGGGGACTCATCACAGACGGTCCCTCCTGCTGCACCACAGCCCTCTTCAGTGAGTCAGCAAGGTTATAGTGCAAATCAACAGCCTAGCCCTAACCCAGGGAGTTACCCTCCACCAAGTCAGTCGGGGTATGGAATGACTGCACCTTCCCAAACTGGCTATGGAAATCAACCTGCTGCTCAGGCTGCTTATGGGGCTGCTTATGGAGCTCCTCAGACTCAGAAACAACCTCCTACTAATCCTCCAGCCTATGGTCAAAGCACTCAGTCACCAAGCACCGCTAGTGGCTATGGGCAACCTGCTGGATTGCCATCTGGATACTCAAGTACGCAGCCACCCGCATCCGGGTACACTCAACCAGATTCTGCTTCTCAACGTGCTCCACCATCCAGTTACGGCACTGCTGCAGCTCAGCCAGGGTTTGCGCCACCTCCATATGGTGGTGCTCCTCCAACAAATCAGTCAGCTTACGGGCAAGCTCCACCACCTTATGGTGGCTCTTATGGTGCTGGTTACCCTCAGCCCCATTATTCATCTGAAGGTAATGCAGGTGGTGCTACTCGTGGGGGCTATGATTCTGCATCAGCTGCTCAGGCAGCGACCCAAAGTGGGGTTGCAAAAGCATCACCAAAAAGTTGATAATATTGTATGTGTTTGCTTAGGTGTGTATGTTGCGGAGAACGTAGCTTTGTTTTTGTGGTTTTTATTAGACAGGTAGTTTTATGAGACCTCATTAATGCCCGAATTCTTTACTGTACTTTGTTTTGCTATGGTTAAAAACGGTTCTGGAGTTTTGTCTCTCTTGAACAAAACACTCTTTCTCTACAGGCGGTGGCGTCTCCTTGATGATTTTGATTTTTGATTGTGGCGTTGGGGATTAAGACTGTTTAGGATTATTGTAACTTTAAGCTACGGAAATGGTAAAATAGCATTTATTAAATAAAATGTTAGATATGAAAAATTCTTATTTCAAATGTTTATATGAACTTATAGCAAAATAATACAAATAC

Coding sequence (CDS)

ATGGCTGACGAAGCTCAGTATTCATCTGCTACTGATACTCCTTCCAACAAGCGCAAGTACGATGACCAACCTCCACCCCGCCGTCCAACTGGCTTTTCCGGTCCCATCACTTCCCCTTCATCCGATTCCGCTCCCTCCTACAACAACGTCCCTCCCCCTATGGATGAGATCCAGCTCGCTAAGCAGCGTGCTCAGGAGATTGCCTCTCGCTTGATTATCTCCAGCGGTGGCGTTGGGGCTGGTGCTGGACCTGGCGTTGGAGCAGATGTCAAACGTCCGAGGGTTGAAAACGGCGGCGGGTATGACTCCTACGACAAGGGTTTTAGTTCTGGTCCAGACCTGAAGCCTCACATGTCAAATTCAGCCCCTTCAGCGATACCTATTTCCTATGGTTTCCAAGGGTCAAGCAAGAAAATTGAAATTCCAAATGGGAGAGTAGGCGTAATTATTGGTAAAGGTGGTGAGACGATCAAGTACCTTCAGCTCCAGTCTGGGGCAAAAATACAAGTTACTCGTGACATGGACGCAGATCCCAACTCTACTACTCGGATGGTTGAGCTAATGGGCACCCCTGATCAAATTGCCAAGGCTGAGCAGCTGATAAATGATGTTCTTTCTGAGGCTGAATCTGGCGGTTCTGGCATAGTATCACGAAGACTAACAGGCCCTTCAGGATCTGAGCAGTTTGTTATGAAAATTCCTAATAATAAGGTTGGCTTGGTTATTGGTAAAGGTGGTGAAACAATCAAAAGTATGCAAGCTAGGACTGGAGCACGTATCCAGGTGATACCATTGCACTTACCCCCTGGGGACACATCTACAGAAAGAACCTTACAGATTGATGGTTCAAGTGAACAGATTGAGTCAGCAAAACAGTTGGTTAATGAAGTTATCAGCGAGGTGCGTTTGCAGATCTGGGTTACATATTTATTTTGCCTTGTTGTAGTTGGAATTAATACCTGGTTAACACCTACTTCCATTTATTTTTGTGTTTATAATGATTTTTCCTGCTTGTCTTTGGTTATTTTTTATACAACTGTTGATGCAACTGTTCCATCTTATTCTGAAACTCCTTTAGTTCTATTCTCACAAAAAAAAACTCCAGTTTTATTAATTTTAGGGTTCTACCTCAACGCCAAGGTCAGCATTAAACCAGTGGTGTTGATTGGACGTTGGCATATTTGCTTTCCTTACCTTGTAGTTTACATTATGCTGTGA

Protein sequence

MADEAQYSSATDTPSNKRKYDDQPPPRRPTGFSGPITSPSSDSAPSYNNVPPPMDEIQLAKQRAQEIASRLIISSGGVGAGAGPGVGADVKRPRVENGGGYDSYDKGFSSGPDLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSGSEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVISEVRLQIWVTYLFCLVVVGINTWLTPTSIYFCVYNDFSCLSLVIFYTTVDATVPSYSETPLVLFSQKKTPVLLILGFYLNAKVSIKPVVLIGRWHICFPYLVVYIML

Homology

[Close]

BLAST of Cucsat.G6955 vs. ExPASy Swiss-Prot
Match: Q8UVD9 (Far upstream element-binding protein 2 OS=Gallus gallus OX=9031 GN=KHSRP PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.7e-22
Identity = 59/165 (35.76%), Postives = 100/165 (60.61%), Query Frame = 0


Query: 35  SKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTPDQIA 94
           +++  +P+G VG+IIG+GGE I  +Q  SG K+Q++ D    P    R V L G+P+ + 
Sbjct: 210 TEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGSPEAVQ 269

Query: 95  KAEQLINDVLSEAESGGSGIVSRRLTGPSGSEQFVMKIPNNKVGLVIGKGGETIKSMQAR 154
           KA+ +++D++S    G  G       G +G+ Q +M IP  K GLVIGKGGETIK +Q R
Sbjct: 270 KAKLMLDDIVSRGRGGPPGQFHDYANGQNGTVQEIM-IPAGKAGLVIGKGGETIKQLQER 329

Query: 155 TGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVISE 200
            G  +++I +     +T+ ++ L+I G   +++ A ++V +++ E
Sbjct: 330 AG--VKMIFIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 368

[Close]

BLAST of Cucsat.G6955 vs. ExPASy Swiss-Prot
Match: Q92945 (Far upstream element-binding protein 2 OS=Homo sapiens OX=9606 GN=KHSRP PE=1 SV=4)

HSP 1 Score: 104.0 bits (258), Expect = 3.1e-21
Identity = 59/166 (35.54%), Postives = 99/166 (59.64%), Query Frame = 0


Query: 35  SKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTPDQIA 94
           +++  +P+G VG+IIG+GGE I  +Q  SG K+Q++ D    P    R V L G P+ + 
Sbjct: 146 TEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPESVQ 205

Query: 95  KAEQLINDVLSEAESGGSGIVSRRLT-GPSGSEQFVMKIPNNKVGLVIGKGGETIKSMQA 154
           KA+ +++D++S    G  G        G +G+ Q +M IP  K GLVIGKGGETIK +Q 
Sbjct: 206 KAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIM-IPAGKAGLVIGKGGETIKQLQE 265

Query: 155 RTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVISE 200
           R G  +++I +     +T+ ++ L+I G   +++ A ++V +++ E
Sbjct: 266 RAG--VKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 305

[Close]

BLAST of Cucsat.G6955 vs. ExPASy Swiss-Prot
Match: Q3U0V1 (Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV=2)

HSP 1 Score: 104.0 bits (258), Expect = 3.1e-21
Identity = 59/166 (35.54%), Postives = 99/166 (59.64%), Query Frame = 0


Query: 35  SKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTPDQIA 94
           +++  +P+G VG+IIG+GGE I  +Q  SG K+Q++ D    P    R V L G P+ + 
Sbjct: 147 TEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPESVQ 206

Query: 95  KAEQLINDVLSEAESGGSGIVSRRLT-GPSGSEQFVMKIPNNKVGLVIGKGGETIKSMQA 154
           KA+ +++D++S    G  G        G +G+ Q +M IP  K GLVIGKGGETIK +Q 
Sbjct: 207 KAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIM-IPAGKAGLVIGKGGETIKQLQE 266

Query: 155 RTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVISE 200
           R G  +++I +     +T+ ++ L+I G   +++ A ++V +++ E
Sbjct: 267 RAG--VKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 306

[Close]

BLAST of Cucsat.G6955 vs. ExPASy Swiss-Prot
Match: Q99PF5 (Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.1e-21
Identity = 59/166 (35.54%), Postives = 99/166 (59.64%), Query Frame = 0


Query: 35  SKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTPDQIA 94
           +++  +P+G VG+IIG+GGE I  +Q  SG K+Q++ D    P    R V L G P+ + 
Sbjct: 147 TEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGAPESVQ 206

Query: 95  KAEQLINDVLSEAESGGSGIVSRRLT-GPSGSEQFVMKIPNNKVGLVIGKGGETIKSMQA 154
           KA+ +++D++S    G  G        G +G+ Q +M IP  K GLVIGKGGETIK +Q 
Sbjct: 207 KAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIM-IPAGKAGLVIGKGGETIKQLQE 266

Query: 155 RTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVISE 200
           R G  +++I +     +T+ ++ L+I G   +++ A ++V +++ E
Sbjct: 267 RAG--VKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVMDILRE 306

[Close]

BLAST of Cucsat.G6955 vs. ExPASy Swiss-Prot
Match: Q91WJ8 (Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 6.9e-21
Identity = 65/188 (34.57%), Postives = 107/188 (56.91%), Query Frame = 0


Query: 15  PHMSNSAPSAIPISYGFQGSS---KKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTR 74
           P  ++S  + +P  +  Q  S   ++ ++P+G VG IIG+GGE I  +Q +SG KIQ+  
Sbjct: 75  PPQNDSFGAQLPPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP 134

Query: 75  DMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSGSEQFVMK 134
           D    P    R   L GTP+ +  A++L++ ++   E G          GP  + Q +M 
Sbjct: 135 DSGGLPE---RSCMLTGTPESVQSAKRLLDQIV---EKGRPAPGFHHGDGPGNAVQEIM- 194

Query: 135 IPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQ 194
           IP +K GLVIGKGGETIK +Q R G  ++++ +   P +T  ++ L+I G   +++ AK+
Sbjct: 195 IPASKAGLVIGKGGETIKQLQERAG--VKMVMIQDGPQNTGADKPLRITGDPYKVQQAKE 253

Query: 195 LVNEVISE 200
           +V E+I +
Sbjct: 255 MVLELIRD 253

[Close]

BLAST of Cucsat.G6955 vs. NCBI nr
Match: KAG7020646.1 (Far upstream element-binding protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357 bits (916), Expect = 7.70e-120
Identity = 189/215 (87.91%), Postives = 198/215 (92.09%), Query Frame = 0


Query: 5   RGLKTAADLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG 64
           +G  + +DLK H+SNSAPSA P+SYGFQG+SKKI+IPNGRVGVIIGKGGETIKYLQLQSG
Sbjct: 113 KGFSSGSDLKSHLSNSAPSATPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSG 172

Query: 65  AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG 124
           AKIQVTRDMDADPNS TR V+LMGTPDQIAKAEQLINDVLSEAESGGSGIVS+RLTG SG
Sbjct: 173 AKIQVTRDMDADPNSATRTVDLMGTPDQIAKAEQLINDVLSEAESGGSGIVSQRLTGSSG 232

Query: 125 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE 184
           SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE
Sbjct: 233 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE 292

Query: 185 QIESAKQLVNEVISEVRLQIWVTY-LFCLVVVGIN 218
           QIESAKQLVNEV SEVRLQI V   L C  VVG N
Sbjct: 293 QIESAKQLVNEVTSEVRLQILVPLRLLCPFVVGTN 327

[Close]

BLAST of Cucsat.G6955 vs. NCBI nr
Match: XP_008444487.1 (PREDICTED: far upstream element-binding protein 1 [Cucumis melo])

HSP 1 Score: 366 bits (940), Expect = 1.19e-118
Identity = 190/197 (96.45%), Postives = 192/197 (97.46%), Query Frame = 0


Query: 5   RGLKTAADLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG 64
           +G  +  DLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG
Sbjct: 106 KGFSSGPDLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG 165

Query: 65  AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG 124
           AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG
Sbjct: 166 AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG 225

Query: 125 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE 184
           SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE
Sbjct: 226 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE 285

Query: 185 QIESAKQLVNEVISEVR 201
           QIESAKQLVNEVISE R
Sbjct: 286 QIESAKQLVNEVISENR 302

[Close]

BLAST of Cucsat.G6955 vs. NCBI nr
Match: XP_004142921.1 (far upstream element-binding protein 1 [Cucumis sativus] >KGN62398.1 hypothetical protein Csa_018722 [Cucumis sativus])

HSP 1 Score: 366 bits (940), Expect = 1.29e-118
Identity = 190/197 (96.45%), Postives = 192/197 (97.46%), Query Frame = 0


Query: 5   RGLKTAADLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG 64
           +G  +  DLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG
Sbjct: 106 KGFSSGPDLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG 165

Query: 65  AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG 124
           AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG
Sbjct: 166 AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG 225

Query: 125 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE 184
           SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE
Sbjct: 226 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE 285

Query: 185 QIESAKQLVNEVISEVR 201
           QIESAKQLVNEVISE R
Sbjct: 286 QIESAKQLVNEVISENR 302

[Close]

BLAST of Cucsat.G6955 vs. NCBI nr
Match: KAA0060992.1 (far upstream element-binding protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 367 bits (941), Expect = 3.70e-117
Identity = 190/196 (96.94%), Postives = 192/196 (97.96%), Query Frame = 0


Query: 5   RGLKTAADLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG 64
           +G  +  DLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG
Sbjct: 106 KGFSSGPDLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG 165

Query: 65  AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG 124
           AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG
Sbjct: 166 AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG 225

Query: 125 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE 184
           SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE
Sbjct: 226 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE 285

Query: 185 QIESAKQLVNEVISEV 200
           QIESAKQLVNEVISEV
Sbjct: 286 QIESAKQLVNEVISEV 301

[Close]

BLAST of Cucsat.G6955 vs. NCBI nr
Match: XP_038884505.1 (far upstream element-binding protein 1 [Benincasa hispida])

HSP 1 Score: 362 bits (930), Expect = 4.77e-117
Identity = 187/197 (94.92%), Postives = 192/197 (97.46%), Query Frame = 0


Query: 5   RGLKTAADLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG 64
           +G  +  +LKPHMS+SAPSAIP+SYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG
Sbjct: 114 KGFSSGPELKPHMSSSAPSAIPVSYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG 173

Query: 65  AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG 124
           AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG
Sbjct: 174 AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG 233

Query: 125 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE 184
           SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE
Sbjct: 234 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE 293

Query: 185 QIESAKQLVNEVISEVR 201
           QIESAKQLVNEVISE R
Sbjct: 294 QIESAKQLVNEVISENR 310

[Close]

BLAST of Cucsat.G6955 vs. ExPASy TrEMBL
Match: A0A1S3B9Y5 (far upstream element-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103487791 PE=4 SV=1)

HSP 1 Score: 366 bits (940), Expect = 5.78e-119
Identity = 190/197 (96.45%), Postives = 192/197 (97.46%), Query Frame = 0


Query: 5   RGLKTAADLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG 64
           +G  +  DLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG
Sbjct: 106 KGFSSGPDLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG 165

Query: 65  AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG 124
           AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG
Sbjct: 166 AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG 225

Query: 125 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE 184
           SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE
Sbjct: 226 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE 285

Query: 185 QIESAKQLVNEVISEVR 201
           QIESAKQLVNEVISE R
Sbjct: 286 QIESAKQLVNEVISENR 302

[Close]

BLAST of Cucsat.G6955 vs. ExPASy TrEMBL
Match: A0A0A0LKT6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351790 PE=4 SV=1)

HSP 1 Score: 366 bits (940), Expect = 6.26e-119
Identity = 190/197 (96.45%), Postives = 192/197 (97.46%), Query Frame = 0


Query: 5   RGLKTAADLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG 64
           +G  +  DLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG
Sbjct: 106 KGFSSGPDLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG 165

Query: 65  AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG 124
           AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG
Sbjct: 166 AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG 225

Query: 125 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE 184
           SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE
Sbjct: 226 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE 285

Query: 185 QIESAKQLVNEVISEVR 201
           QIESAKQLVNEVISE R
Sbjct: 286 QIESAKQLVNEVISENR 302

[Close]

BLAST of Cucsat.G6955 vs. ExPASy TrEMBL
Match: A0A5A7UYL7 (Far upstream element-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001270 PE=4 SV=1)

HSP 1 Score: 367 bits (941), Expect = 1.79e-117
Identity = 190/196 (96.94%), Postives = 192/196 (97.96%), Query Frame = 0


Query: 5   RGLKTAADLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG 64
           +G  +  DLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG
Sbjct: 106 KGFSSGPDLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG 165

Query: 65  AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG 124
           AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG
Sbjct: 166 AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG 225

Query: 125 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE 184
           SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE
Sbjct: 226 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE 285

Query: 185 QIESAKQLVNEVISEV 200
           QIESAKQLVNEVISEV
Sbjct: 286 QIESAKQLVNEVISEV 301

[Close]

BLAST of Cucsat.G6955 vs. ExPASy TrEMBL
Match: A0A6J1K9U8 (far upstream element-binding protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111492404 PE=4 SV=1)

HSP 1 Score: 361 bits (926), Expect = 6.85e-117
Identity = 185/199 (92.96%), Postives = 194/199 (97.49%), Query Frame = 0


Query: 5   RGLKTAADLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG 64
           +G  + ADLKPHMS+SAPS+IP+SYGFQG+SKKIEIPNGRVGVIIGKGGETIKYLQLQSG
Sbjct: 113 KGFSSGADLKPHMSSSAPSSIPVSYGFQGTSKKIEIPNGRVGVIIGKGGETIKYLQLQSG 172

Query: 65  AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG 124
           AKIQVTRDMDADPNS TRMVELMGTPDQIAKAEQL+NDVLSEAESGGSGIVSRRLTGPSG
Sbjct: 173 AKIQVTRDMDADPNSATRMVELMGTPDQIAKAEQLMNDVLSEAESGGSGIVSRRLTGPSG 232

Query: 125 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE 184
           SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE
Sbjct: 233 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE 292

Query: 185 QIESAKQLVNEVISEVRLQ 203
           QIESAKQLVNEVISE R++
Sbjct: 293 QIESAKQLVNEVISENRVR 311

[Close]

BLAST of Cucsat.G6955 vs. ExPASy TrEMBL
Match: A0A6J1BQP1 (far upstream element-binding protein 1 OS=Momordica charantia OX=3673 GN=LOC111004734 PE=4 SV=1)

HSP 1 Score: 358 bits (920), Expect = 5.87e-116
Identity = 184/199 (92.46%), Postives = 193/199 (96.98%), Query Frame = 0


Query: 5   RGLKTAADLKPHMSNSAPSAIPISYGFQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSG 64
           +G  +  DLKPHMS+SAPSAIP+SYGFQG+SKKI+IPNGRVGVIIGKGGETIKYLQLQSG
Sbjct: 113 KGFSSGPDLKPHMSSSAPSAIPVSYGFQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSG 172

Query: 65  AKIQVTRDMDADPNSTTRMVELMGTPDQIAKAEQLINDVLSEAESGGSGIVSRRLTGPSG 124
           AKIQVTRDMDADPNSTTRMVELMGTPDQI+KAEQLINDVLSEAESGGSGIVSRRLTGPSG
Sbjct: 173 AKIQVTRDMDADPNSTTRMVELMGTPDQISKAEQLINDVLSEAESGGSGIVSRRLTGPSG 232

Query: 125 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSE 184
           SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTS ERTLQIDGSSE
Sbjct: 233 SEQFVMKIPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSMERTLQIDGSSE 292

Query: 185 QIESAKQLVNEVISEVRLQ 203
           QIESAKQLVNEVISE R++
Sbjct: 293 QIESAKQLVNEVISENRVR 311

The following BLAST results are available for this feature:

BLAST of Cucsat.G6955 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8UVD9	4.7e-22	35.76	Far upstream element-binding protein 2 OS=Gallus gallus OX=9031 GN=KHSRP PE=1 SV...	[more]
Q92945	3.1e-21	35.54	Far upstream element-binding protein 2 OS=Homo sapiens OX=9606 GN=KHSRP PE=1 SV=...	[more]
Q3U0V1	3.1e-21	35.54	Far upstream element-binding protein 2 OS=Mus musculus OX=10090 GN=Khsrp PE=1 SV...	[more]
Q99PF5	3.1e-21	35.54	Far upstream element-binding protein 2 OS=Rattus norvegicus OX=10116 GN=Khsrp PE...	[more]
Q91WJ8	6.9e-21	34.57	Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV...	[more]

BLAST of Cucsat.G6955 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7020646.1	7.70e-120	87.91	Far upstream element-binding protein 2 [Cucurbita argyrosperma subsp. argyrosper...	[more]
XP_008444487.1	1.19e-118	96.45	PREDICTED: far upstream element-binding protein 1 [Cucumis melo]	[more]
XP_004142921.1	1.29e-118	96.45	far upstream element-binding protein 1 [Cucumis sativus] >KGN62398.1 hypothetica...	[more]
KAA0060992.1	3.70e-117	96.94	far upstream element-binding protein 1 [Cucumis melo var. makuwa]	[more]
XP_038884505.1	4.77e-117	94.92	far upstream element-binding protein 1 [Benincasa hispida]	[more]

BLAST of Cucsat.G6955 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B9Y5	5.78e-119	96.45	far upstream element-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103487791 P...	[more]
A0A0A0LKT6	6.26e-119	96.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G351790 PE=4 SV=1	[more]
A0A5A7UYL7	1.79e-117	96.94	Far upstream element-binding protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1K9U8	6.85e-117	92.96	far upstream element-binding protein 1 OS=Cucurbita maxima OX=3661 GN=LOC1114924...	[more]
A0A6J1BQP1	5.87e-116	92.46	far upstream element-binding protein 1 OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 124..198 e-value: 1.2E-16 score: 71.3 coord: 32..105 e-value: 1.1E-16 score: 71.5
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 36..102 e-value: 1.7E-17 score: 63.0 coord: 129..195 e-value: 7.2E-19 score: 67.4
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 123..203 e-value: 4.4E-23 score: 83.1 coord: 30..122 e-value: 1.5E-23 score: 84.6
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 36..111
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 121..200
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 24..200
None	No IPR available	PANTHER	PTHR10288:SF302	FAR UPSTREAM ELEMENT-BINDING PROTEIN 2-LIKE ISOFORM X1	coord: 24..200
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 33..100 score: 18.260618
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 125..193 score: 17.023788
None	No IPR available	CDD	cd00105	KH-I	coord: 35..100 e-value: 1.50742E-15 score: 67.9703
None	No IPR available	CDD	cd00105	KH-I	coord: 128..193 e-value: 1.60165E-16 score: 70.6667

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G6955.T2	Cucsat.G6955.T2	mRNA
Cucsat.G6955.T3	Cucsat.G6955.T3	mRNA
Cucsat.G6955.T1	Cucsat.G6955.T1	mRNA
Cucsat.G6955.T8	Cucsat.G6955.T8	mRNA
Cucsat.G6955.T6	Cucsat.G6955.T6	mRNA
Cucsat.G6955.T4	Cucsat.G6955.T4	mRNA
Cucsat.G6955.T5	Cucsat.G6955.T5	mRNA
Cucsat.G6955.T7	Cucsat.G6955.T7	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding