Cucsat.G6929 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TAATAATACCCATTAATCACCGCCAATCTCACCTTAGCTTACTTATCCTCTTTGCTACCTATCAACAGTTAAACCATTGCTTGGCTTTCTTAGCACATTTCGTCTCTCTTCAAGCCCTCCATATAACTCTACTTGATTCAAATCATTAATAGGTCATTTTGCTGAATTGATTTACCAAACTTTAACTTTTACACTTTAACTTTCGAGCTTAGTCCCAGAGTACTCTTTCAGCAAAGGCAAACGCGATACACAAATCAATTTTGTACTTCAAAAACTGATGCTCTTAAATGGAAACTGTAATTGGAAGATCCTTTTTTCACCGAACACTTGCACACTGTATAAACTACATGCATGTGCTGCAATTTTGCTACAACTTTGGCTTTATAAAGTGACATTCTCTTTGTCTGATGTCTGAGTTAACATCCAAAGTAATGATGTCTGTCTCCAGCCATTCTAAATGTCGCTTCCTTCTTTCCTTTTCTTTTTTCTTCTTTCTAATAATCTTCCAGACTCTTATTTGGCTATGATTTTGAATTTGTACTTCCAAAAAGTTGTCCAGAGATACTGACACAAGGCACCCTTGAATCTAGATCCCCCAGTCGGCAGCTGCTTTTGTAACAGAATTAGATCAAAAACTTCATTTTTCCACTCTTAAAGAAAAAGCATACTTCTTATAACTCATAGACACATACCTTATCGTAAACCTCTCTTTTCACTTTTATAGTAATTTAAACCCCCTTGGAAGCAAGGTAGAAATTCATCAAAACTTTTGACCTTTAATCCCCTTTTATGATAGTATATAAGGGCTTCAACTCAAAACCAAAATCACCATTAATAAGCATATAACCCAACTTTCCTCCTTTCTGCTCACTCTCCACTCTTATCTTCCCTATCAAAATATATATAGAGAGATAAATCCATGGCTGTTGCAGCACCACGTAAGTTGAGTCTCATCAAACCAGACCGTCAGCTTTTCGCAGGAGGCGACGAAAATGCCTTGACAAAGCAAGTTTTGGCCACTCATTCTGAAGAACCACTTGAGTTTCCTGTCACCCCTTTGCTCAGCCTTGTTGAACAAATTTTCCTTCGAGCTAAACTCAATACTCTCCAGGCATATACATGTGCTTTAATAAGTGTTTTCTCACTTTAAATCATACCAAATCACTGTTTGGTTTAAAAGAATATTCAAACTTTTCGTGTAAACTTGGCTCATTGGTTGGTTTTGTTTCCAGGGAACAACTCGAGCTCAGCTGGAGGCAATCGAAGACAAATCCCCAAGCCCAACAGACTTATTAGACTTATTGGATTTTGTATCATTCACTATCAATAGAGTTTCTAATGAGGTTGTGTAGTTTAGAGGTTTTTCTTTCTTTTGGGTATACAAAAAGGTCCATGTCTTTTCAGAGATTCATTTTCTTTGTTTGTTTTGAATGATCACAGATACAGTACAAGTGTTCAGGAGCTGGGGATCCTCATACCGTGACTATGGAAGTCTTCAATTTGTTATCAAGTTGGCCGTGGGATGCTAAGGTGGTGCTGGCCTTGGCTGCATTTGCTATCAACTATGGAGAGTTTTGGCTATTGGTTCAACAGTCCTCAACCGACTTACTTGCCAAAGACATCTCGCTCCTCAAAAAACTCCCGGAAATATTCGAGAGAGTCGACATAGTGAAGCAAAAATTTGAAGCCCTCGACAAACTCATCAAGTCACTCGTGGATGTGGCGAAGTGCATTGTTGACTTCAAGATGCTTCCTCCCCATTATATTACTCCAGACACGCCTGAAATGAAGAGTGCAACCACTCTTATTCCAACAGCTATTTATTGGACAATCAGAAGCATCGTTGCCTGCGCTGCACAGAATGCGGGCCTTATTGGAGTTGGTCATGAGTATGCCACTGTCTCCCACTTTTGATAATCTAACTTACCTAAATAGTTTACCATTCTAAATTTTTTTTCTCTGCATCATTTCATCAGGTATTTGGCATCAGCATCTGAGACATGGGAGCTCTCTAGTTTGGCCCATAAGATCGACAACATCCGCAAGCACCTCGAACAACTGCTTCTTGCTTGTCATCATTACATAAGTGAGTCTTCTGTTGCTCTCTAAACTTCAATATAAGCAGGCACTTGAGACTGAGTATTTTTTCCTGTGTGTGTGTATACAGATGAGAAGATGCATCACGAGGCATATATGAACCTGGTCCGCCTTTTTGAGATACCCCACATTGACAACAACAAGATTCTGAGGGCTTTGATTTACTCCAAGGATGATAAGCCACCCCTACTCGATGGTTTAAGCAAAGAAAAGGTCAGCACTTTCTCCTTTCTACCAAACCCTCTACACAAAATACAATGAGAGGGAATGTAACAGTTTCTAAACTTCCCATATATTCTATGTCGGTTTTGAAACGATTCTTCAAGTACCCTCTATCAAACACTACTTGAGCATTTTTTAATCACTTCACAGGCTACTCTCGAAGTGCTGAGAAAGAAAAATGTGCTACTTCTCATCTCTGACCTGGACCTGTCCATAGTGGAGCTTTCAATGCTAGACCAAATCTACAGAGAATCGAGACAGAACAAAACAAGATCAGAAAGCGATTACGAGGTGGTGTGGATGCCAATTGTGGAGTCCCCATGGACAGAAGATAAACAGGTGAAATTCGAGGCGTTGTTGGGGTTGATGCCATGGTACTCAGTGGCACATCCTTCACTAATCGAATCCGCCGTCATTAAGTATGTAAGACAAGTATGGAACTTCATCAAAAAGCCTTTATTGGTGGTTCTGGACCCGCAAGGCAAAGTGGTTAATACCAACGCCGTCCATATGCTCTGGATTTGGGGAAGTTTGGCTTATCCTTTCACCAGCGCTCGAGAGGAATCACTTTGGAAAGAAGAAACTTGGCGACTAGAGCTCTTAGTCGATTCGGTCGAACCCCTCATCTTCCAATGGGTAATAAACCTCAACTTCCACCCACTTTTCCAAAGTTGATTGATATTCTCATTTAACTCACTTTCTTTCTGTAATGTGGTAAATTTTCAGATGGAGGCAGGGAAATACATTTGCATACTTGGAGGGGAAGATTTGGCATGGATAAGAGGCTTCAGTGCAAAGGCATTAGGAGTAGCTAAGGATGCTGGGATAAATTTGGAGATACTGTACGTGGGAAAGAGCAACCCGGGGGAGAAAATAAAGAAGAACATAGCTGGAATCTTAGCAGATAAAATGATCCGCACACTTGTAGATCCAACCCTGATTTGGTTCTTCTGGGTTAGGCTAGAAAGCATGTGGTATTCAAAAACACAAAGGGGAAACACAATTGAAGACGACCCCGTAATGCAAGAGACGATGACGATGTTGAGTTTTGACAGTGGCGACCAGGGATGGGCCTTGTTCTGCAAAGGCTCAACCGATATCCTTCGTGCCAAAGCCGAGACTATAACCAATGTGGTGGACGGTTATGAAGAGCGTTGGAAAGTGCATGTGAAGGAAGAAGGTTTTATACCTGCTATGACCAAAGACCTCCAAGACATCCACACTCCGGAGCATTGTAACCGTCTGATTCTTCCTTCTTCCAATGGCACCATTCCAGAGAAGGTGGTTTGTTCAGAATGTGGTAGTGCCATGGAAAAATTCATCATGTATCGCTGTTGCAACGACTAAAGATCGCAAAGTTTCTTCCCTTCCAATAACACAGCTTTCCTTTCAACTTATGTGACATTGCCGAGAGTTTCCTTCAAAGTTATGAGTGTGAGTTTGTTAGTTGTTTGCAGCGTGGTTTCCTCTTCTGAAATAAAAGTTGTAACTCCATGGATGCATGGAAGTGAACTTTGTTTTGTAATTTCTTGTCATATTTATATCTTCCACCAAAGGTAATTTTAAACATGGCTTCATTTTTAAATACTTTTCGCTCTCGCTACTGGGTGACAAACAAAAATATTACTTGATTTACTCAATGACAAAATTAGTATTATTGCCAAGTACTTGCTTCTTCATCAAATTTCAAAGTTAACATTAAGAATCAGCTTTTATGAAATACTTTACTTTTCATCGTCTCTCCTTTCTTTCTTTGCAGTATATCCTTTTCTTCATTGAAAAGCTTACATTTGGATAAGACGTACACAAATGATAAATAATGCTTTACATGAACACGATTGTGCTAGCTTATATTTAAATGTCCATTTATAGAATAAACGACTACTTATCAACAACGGTTTATCGTCAGATTCCTCCAAAAGACTTCTTCTTTTACTTTATTTTTTACGAAATTTCGTCTCTTAAATCAATCATATTTTAAATTATAATTTATTTTTCTCCCATTAGCTACAGCAAAAAATTATGCTTTCTTTGTCTTTTTCTTCTTTCCATTTACATTATAATTGAGCTTTTTCATCAAAATTCAACACGTTATACAAAAAATATTAATCAATTCTCCATCCCACAACTTTAACCTTAATGCTTGGAGTCTCCGTTTGTACATATAATTTTTCATTTCTATGGAAATAATTTCAATGCAGATTTGAGAGTGATCGTTCAATACAAATGCCACCAATGAAGACCCTTTTGCATCCCCATATGCTGGCCATCTCCAACTATTCACACATCGAAAATTCGAAAACAACAAAATTTGGATGATGCAAACTCCTATATTCCACTCTTCTATAAGTTATGACAAATACAGAATGAACAGCTAGCAATAATGATATTTTGCAAACGAGATTTTTCACAGGTTCGATGAAAATCAATGTTTGAATCAATCCCATCTTTAAAATAAAGGTGTAAAAGGAATGTACCAGGAGACAGGTAGCTGAGTGCAAAATAAAATTACACGGAGCTGTTTAATACTGGCAGATTTCAAAATCAATTTATGCTTCGGAAACATGAACATCCATCATTATAATCTGAGAGAGTTCACCAGTAAGAAGCAACAATTTTATTAAATAATTTCAGGAGCGACTAGAAGGTAAAACCCTAGGTTTTGAAAACAAAATGAAATGGCACAACGTCAAACCAGTAAAGCCACGAGTCACAAAACGACTCATACCTTGCCTCCGAATGAAACGAAGACGATTAGGTTTGAAGAGTTGCAGTTAGTTTACGCCTCCGTTGACGCGTCCATCTGGATCTAAAACCCACCGATGAACGCAACGCCTATCGAAGGCGATATCAAAACAAATAAAATTTAGGGGACAATGCAGACAAAAGAAAGAGAAAAACAAAGGAAAATGAAGAAAGGAGACGAGATGAATCAAGCAGGGCGGCCGTCGAGAGCGATAGTGGTTT ATGGCTGTTGCAGCACCACGTAAGTTGAGTCTCATCAAACCAGACCGTCAGCTTTTCGCAGGAGGCGACGAAAATGCCTTGACAAAGCAAGTTTTGGCCACTCATTCTGAAGAACCACTTGAGTTTCCTGTCACCCCTTTGCTCAGCCTTGTTGAACAAATTTTCCTTCGAGCTAAACTCAATACTCTCCAGGGAACAACTCGAGCTCAGCTGGAGGCAATCGAAGACAAATCCCCAAGCCCAACAGACTTATTAGACTTATTGGATTTTGTATCATTCACTATCAATAGAGTTTCTAATGAGATACAGTACAAGTGTTCAGGAGCTGGGGATCCTCATACCGTGACTATGGAAGTCTTCAATTTGTTATCAAGTTGGCCGTGGGATGCTAAGGTGGTGCTGGCCTTGGCTGCATTTGCTATCAACTATGGAGAGTTTTGGCTATTGGTTCAACAGTCCTCAACCGACTTACTTGCCAAAGACATCTCGCTCCTCAAAAAACTCCCGGAAATATTCGAGAGAGTCGACATAGTGAAGCAAAAATTTGAAGCCCTCGACAAACTCATCAAGTCACTCGTGGATGTGGCGAAGTGCATTGTTGACTTCAAGATGCTTCCTCCCCATTATATTACTCCAGACACGCCTGAAATGAAGAGTGCAACCACTCTTATTCCAACAGCTATTTATTGGACAATCAGAAGCATCGTTGCCTGCGCTGCACAGAATGCGGGCCTTATTGGAGTTGGTCATGAGTATTTGGCATCAGCATCTGAGACATGGGAGCTCTCTAGTTTGGCCCATAAGATCGACAACATCCGCAAGCACCTCGAACAACTGCTTCTTGCTTGTCATCATTACATAAATGAGAAGATGCATCACGAGGCATATATGAACCTGGTCCGCCTTTTTGAGATACCCCACATTGACAACAACAAGATTCTGAGGGCTTTGATTTACTCCAAGGATGATAAGCCACCCCTACTCGATGGTTTAAGCAAAGAAAAGGCTACTCTCGAAGTGCTGAGAAAGAAAAATGTGCTACTTCTCATCTCTGACCTGGACCTGTCCATAGTGGAGCTTTCAATGCTAGACCAAATCTACAGAGAATCGAGACAGAACAAAACAAGATCAGAAAGCGATTACGAGGTGGTGTGGATGCCAATTGTGGAGTCCCCATGGACAGAAGATAAACAGGTGAAATTCGAGGCGTTGTTGGGGTTGATGCCATGGTACTCAGTGGCACATCCTTCACTAATCGAATCCGCCGTCATTAAGTATGTAAGACAAGTATGGAACTTCATCAAAAAGCCTTTATTGGTGGTTCTGGACCCGCAAGGCAAAGTGGTTAATACCAACGCCGTCCATATGCTCTGGATTTGGGGAAGTTTGGCTTATCCTTTCACCAGCGCTCGAGAGGAATCACTTTGGAAAGAAGAAACTTGGCGACTAGAGCTCTTAGTCGATTCGGTCGAACCCCTCATCTTCCAATGGATGGAGGCAGGGAAATACATTTGCATACTTGGAGGGGAAGATTTGGCATGGATAAGAGGCTTCAGTGCAAAGGCATTAGGAGTAGCTAAGGATGCTGGGATAAATTTGGAGATACTGTACGTGGGAAAGAGCAACCCGGGGGAGAAAATAAAGAAGAACATAGCTGGAATCTTAGCAGATAAAATGATCCGCACACTTGTAGATCCAACCCTGATTTGGTTCTTCTGGGTTAGGCTAGAAAGCATGTGGTATTCAAAAACACAAAGGGGAAACACAATTGAAGACGACCCCGTAATGCAAGAGACGATGACGATGTTGAGTTTTGACAGTGGCGACCAGGGATGGGCCTTGTTCTGCAAAGGCTCAACCGATATCCTTCGTGCCAAAGCCGAGACTATAACCAATGTGGTGGACGGTTATGAAGAGCGTTGGAAAGTGCATGTGAAGGAAGAAGGTTTTATACCTGCTATGACCAAAGACCTCCAAGACATCCACACTCCGGAGCATTGTAACCGTCTGATTCTTCCTTCTTCCAATGGCACCATTCCAGAGAAGGTGGTTTGTTCAGAATGTGGTAGTGCCATGGAAAAATTCATCATGTATCGCTGTTGCAACGACTAA MAVAAPRKLSLIKPDRQLFAGGDENALTKQVLATHSEEPLEFPVTPLLSLVEQIFLRAKLNTLQGTTRAQLEAIEDKSPSPTDLLDLLDFVSFTINRVSNEIQYKCSGAGDPHTVTMEVFNLLSSWPWDAKVVLALAAFAINYGEFWLLVQQSSTDLLAKDISLLKKLPEIFERVDIVKQKFEALDKLIKSLVDVAKCIVDFKMLPPHYITPDTPEMKSATTLIPTAIYWTIRSIVACAAQNAGLIGVGHEYLASASETWELSSLAHKIDNIRKHLEQLLLACHHYINEKMHHEAYMNLVRLFEIPHIDNNKILRALIYSKDDKPPLLDGLSKEKATLEVLRKKNVLLLISDLDLSIVELSMLDQIYRESRQNKTRSESDYEVVWMPIVESPWTEDKQVKFEALLGLMPWYSVAHPSLIESAVIKYVRQVWNFIKKPLLVVLDPQGKVVNTNAVHMLWIWGSLAYPFTSAREESLWKEETWRLELLVDSVEPLIFQWMEAGKYICILGGEDLAWIRGFSAKALGVAKDAGINLEILYVGKSNPGEKIKKNIAGILADKMIRTLVDPTLIWFFWVRLESMWYSKTQRGNTIEDDPVMQETMTMLSFDSGDQGWALFCKGSTDILRAKAETITNVVDGYEERWKVHVKEEGFIPAMTKDLQDIHTPEHCNRLILPSSNGTIPEKVVCSECGSAMEKFIMYRCCND Homology
BLAST of Cucsat.G6929 vs. ExPASy Swiss-Prot
Match: Q93XX2 (Protein SIEVE ELEMENT OCCLUSION A OS=Arabidopsis thaliana OX=3702 GN=SEOA PE=1 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 2.6e-40 Identity = 85/212 (40.09%), Postives = 120/212 (56.60%), Query Frame = 0
BLAST of Cucsat.G6929 vs. ExPASy Swiss-Prot
Match: Q9SS87 (Protein SIEVE ELEMENT OCCLUSION B OS=Arabidopsis thaliana OX=3702 GN=SEOB PE=1 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 4.3e-35 Identity = 81/208 (38.94%), Postives = 115/208 (55.29%), Query Frame = 0
BLAST of Cucsat.G6929 vs. ExPASy Swiss-Prot
Match: Q9FXE2 (Protein SIEVE ELEMENT OCCLUSION C OS=Arabidopsis thaliana OX=3702 GN=SEOC PE=4 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 2.1e-13 Identity = 61/210 (29.05%), Postives = 95/210 (45.24%), Query Frame = 0
BLAST of Cucsat.G6929 vs. NCBI nr
Match: XP_004143056.1 (protein SIEVE ELEMENT OCCLUSION B [Cucumis sativus] >KGN62332.1 hypothetical protein Csa_018749 [Cucumis sativus]) HSP 1 Score: 432 bits (1112), Expect = 4.76e-146 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of Cucsat.G6929 vs. NCBI nr
Match: XP_008444389.1 (PREDICTED: protein SIEVE ELEMENT OCCLUSION B [Cucumis melo]) HSP 1 Score: 422 bits (1085), Expect = 5.59e-142 Identity = 200/206 (97.09%), Postives = 203/206 (98.54%), Query Frame = 0
BLAST of Cucsat.G6929 vs. NCBI nr
Match: KAA0061050.1 (protein SIEVE ELEMENT OCCLUSION B [Cucumis melo var. makuwa]) HSP 1 Score: 422 bits (1085), Expect = 6.27e-142 Identity = 200/206 (97.09%), Postives = 203/206 (98.54%), Query Frame = 0
BLAST of Cucsat.G6929 vs. NCBI nr
Match: XP_038884139.1 (protein SIEVE ELEMENT OCCLUSION B-like [Benincasa hispida]) HSP 1 Score: 402 bits (1034), Expect = 2.68e-134 Identity = 191/206 (92.72%), Postives = 196/206 (95.15%), Query Frame = 0
BLAST of Cucsat.G6929 vs. NCBI nr
Match: XP_022131294.1 (protein SIEVE ELEMENT OCCLUSION B [Momordica charantia]) HSP 1 Score: 370 bits (950), Expect = 1.25e-121 Identity = 167/206 (81.07%), Postives = 192/206 (93.20%), Query Frame = 0
BLAST of Cucsat.G6929 vs. ExPASy TrEMBL
Match: A0A0A0LNE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G349660 PE=4 SV=1) HSP 1 Score: 432 bits (1112), Expect = 2.31e-146 Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
BLAST of Cucsat.G6929 vs. ExPASy TrEMBL
Match: A0A1S3B9Q6 (protein SIEVE ELEMENT OCCLUSION B OS=Cucumis melo OX=3656 GN=LOC103487729 PE=4 SV=1) HSP 1 Score: 422 bits (1085), Expect = 2.71e-142 Identity = 200/206 (97.09%), Postives = 203/206 (98.54%), Query Frame = 0
BLAST of Cucsat.G6929 vs. ExPASy TrEMBL
Match: A0A5A7V141 (Protein SIEVE ELEMENT OCCLUSION B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001880 PE=4 SV=1) HSP 1 Score: 422 bits (1085), Expect = 3.04e-142 Identity = 200/206 (97.09%), Postives = 203/206 (98.54%), Query Frame = 0
BLAST of Cucsat.G6929 vs. ExPASy TrEMBL
Match: A0A6J1BPU4 (protein SIEVE ELEMENT OCCLUSION B OS=Momordica charantia OX=3673 GN=LOC111004559 PE=4 SV=1) HSP 1 Score: 370 bits (950), Expect = 6.06e-122 Identity = 167/206 (81.07%), Postives = 192/206 (93.20%), Query Frame = 0
BLAST of Cucsat.G6929 vs. ExPASy TrEMBL
Match: A0A6J1KKF1 (protein SIEVE ELEMENT OCCLUSION B-like OS=Cucurbita maxima OX=3661 GN=LOC111496078 PE=4 SV=1) HSP 1 Score: 359 bits (921), Expect = 1.25e-117 Identity = 166/206 (80.58%), Postives = 180/206 (87.38%), Query Frame = 0
BLAST of Cucsat.G6929 vs. TAIR 10
Match: AT3G01670.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01680.1); Has 121 Blast hits to 111 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 166.8 bits (421), Expect = 1.9e-41 Identity = 85/212 (40.09%), Postives = 120/212 (56.60%), Query Frame = 0
BLAST of Cucsat.G6929 vs. TAIR 10
Match: AT3G01680.1 (CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med28 (InterPro:IPR021640); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01670.1); Has 122 Blast hits to 112 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 122; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 149.4 bits (376), Expect = 3.1e-36 Identity = 81/208 (38.94%), Postives = 115/208 (55.29%), Query Frame = 0
BLAST of Cucsat.G6929 vs. TAIR 10
Match: AT1G67790.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01680.1); Has 208 Blast hits to 125 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 208; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 77.4 bits (189), Expect = 1.5e-14 Identity = 61/210 (29.05%), Postives = 95/210 (45.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|