Cucsat.G6760 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G6760
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Regulator of chromosome condensation (RCC1) family protein
Location	ctg1502: 1689030 .. 1704676 (-)
RNA-Seq Expression	Cucsat.G6760
Synteny	Cucsat.G6760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTAGGTAATTTTTCTAAAATCACTTTTGACAACAACTGCTTAAGCCAAAATAGTGTTTTGTTTTATGCAGAAGTGTGAGAATAATAATGGAGAAAGGAAGGTTCTGGTTGAAGAAAGAGAAGAAGAAAAGTAAGAATTTGTCGGAAACGTCTAAAATACTGAGTGTGTGAAATGAAGAGTGAAACCAAATGTGACCCCACTGCATTCAATTTCACTTTTCTTCATGGTAGCCCAACGCCCATATGCTCTTGTCTCGTCTCTTGCTTCAATTCTCACTTCATTTCCTTCAATTATTTCTCAATCCCTGCCACTGCCAATGTGAGGTACAGTTTAAATGTTCCTCACTCCGCACTCCCTGGTGGTAGGTTTCTTACACCTTCCCCTTCAAATCATCTCCCCTGTCTCCATCACTATAAATACTTTCCTTCCAATTTCTTGATTTTTCAGACAAATTCGTGATTGGTTTTTCACTGTTTATCCTAAACTAATTTACCCTTTTGCTCTTTTGGATTTCTTTTGCTTCTTTCCTGCGAATTTCTTGATTCTAGGGACAAATTCGTGATGGGGTTCTCACTGTTTATCCATAAGTGATTACCCTTTTGCTCTTTCTCTTTTTTTCTTCATGCCACAACGATTCTGGGATCTTCTGTACTAGATTTCGTTCCTGGGAATTTAAAAAACATCTCTGAGGTTCTGATGGAAGCGACTTCTCCAGTTCGTCGTGTGCTTTTCATCTCCGCGGGTGCTAGTCATTCGGTTGCTCTTCTTTGTAAGCTACTTTGCTTTCTCTGCGTAATCTTTTGTTCTTGTTGTCTGGTAGATCAATGTTTTAATGGATGCTGGTAAACAAGGTTTTGATGAGTTTATCCATTGGGGTTCGAAAAAAAAAAAAAACAGATTTTAAGTAGTGGGTGCTAGTTGATTTAGAACAGTGAGGTTTGTTGTATGATGGGGAGGAGGTTCTCTTTCGTCGGCCATTTTGTGATAAGGGTTTGGATCTTTTGGTATGCTGGTTTTTCTTGATTCCGTGGGCCTGTGGCTTGATTGTAAAGGAGTTGAGCTTTTTGTTGGATTGTCTTTTTGTGTGTGCTGTTTATTCTTTTATTTCTTTTTCTCATTGACAGCTCGATTTGCTATAAGAAAAAGTGACAAGGGAGGCACAATAGAATTTTTAAACTTGTGCAGTGTGTTGCTATGTCCCCAATATAAAAAAAAACAGAATATATTGTCATTAAATCTCAGGTCTCCTTCTGATTTTTGCTTACGAACAACTTTTGATCAATTATGAGAGCTTATTCTCGAAGTATGTGACTATTTAAATCAACAAACATATTTTACTTTAATTATTTCAATGGATTTCTAGAATAAACCAATGGCCCTGTGCCTCTTGTCTCTCCATTTCTCTTTCATTAACTTTTCTCGCTTCCCTTGGATATCTGATCCCTTTATCATGTCCTATACTCTTTGTCCTTTCCATTTGCAAGCATGTTACGTTGGTGACATGCCAGCCAATGGGAGAGCTTATGGTCATCTCTTGGCTATTGGGACATACCTTGTTCCTCTCTTTCTTTTTATCTTTTTTTATTCACAAACACCCTAGCTTTCATTGGGGGAAAAAAGAAACAAAATAAGGGCATACGGAAAAGTAAGCTCAAAAAACGTGGAGGCGAACAAGCTCCTAATCAGCAAGATAAAGTTAAGCTAACAATTACAAAAAAGCTTCGTAACTGAAGGCCCGCAAAGAAACAGAATCTAGTGAGAGAGCATCAAAAGGATTAAGTTCATTCCTTCTAAACATTGTACTATTCCTCACTCCATAGCCCCCACAGAATAGTGCACACTCCCGCTTACCATAAAAATTTTCTTCTCCCATAAAGGGTCGAAGAAGGAATTCCTTGATCATCTCTATTACCATAAAAACTACCTTGTTCTCTATATTACCTTGTTCTCCATGTAGCCCATCATTTATCACAAGATAATAAAATAATTAATTATTTTTTAAAAAAAGTCCAAAATTTTTCAACATGGCAGGTTCTAATTAATGGGCTACATGGAGATTGGTGTAACCAAGACTGCATCCAAATATTTTTCTTAAAAAAATACATGAAGATGCAATCATTCTGTTTCAACCATAAATTCCAAAGAAAAAGAAAAAAACAGGGATGACCCAAAAGGAGAAAAGAAATAAGAGATAGAATATCAACTGGTCTTAGGAGATTTCTCCTAAAGGAAACTTGTAAATAATTCCAGTACGTTGTAGCATGTGCACAGCAATATCAAATATGAATTTGTGTTTCTTTTTCTTGATTTTTTTCCCTTCTTTACAAGTTGATTCTACGTGTCACAATTTTACCATTTGACATGGTTGTCAGCTTCATTTAGCCATATTTTGGATGGTTTGCAGCTGGAAATATTGTTTGTTCTTGGGGACGTGGAGAAGATGGTCAATTAGGTCATGGAGATGCTGAAGATCGATTGTCACCAACACAATTGAGTGCATTGGATGGCCATGAAATAGTATCTGTTACTTGTGGAGCTGATCATACAACAGCTTATTCTGTAGCACGAACAGAAGTTTATAGTTGGGGATGGTAAGCGATTACGTTCTGACATTCATTTTAAACCATTCTATATACTTTATAAAATATTTATGTTAGATGACCCCTTGTGAATGCCTGGACGGTGTTATCTAGTTAGTTAGACTTGATATTGCAAAAAAGTTTCTCTTTCTCCTTTATTCTACACACACACGTTGTCGCGTGTGTGTGTAATATGTATGTGTGTATTTGTATATCTTCTAGGAGATTGGTCACTAAAGCTCTTGTTTATATATATTATATATACAAAACAGGCTTGCTGAATGCAAAAGTGCCATATCGGGAAGTAGTAGCTAGTATGTTCCCTACTAATGTTCTGATTTTTTTTCGTTGCAACATTTATTGCCACCGACTTAGCTGTAGGATGACTTACTTGGTTCTTACCAAGACTGTGAATAAGGATATTTGTTATTGTCTAATGTACAGTTTTAGAGGGAGGGAGGGTTGGGTTCTTATTGAAGTTGGTGAAGTTGCAAATTTTTATAATATTGATGCGAGGATGTATTTTATTCTTAATAACTACTTTCTTCAACTTGATTTCCAGGGGTGACTTTGGGAGGTTAGGTCATGGTAATTCTAGTGATTTGTTTACACCGAAGCCAATTAAAGCATTGCATGGTCTTAAGATAAGGCAAATTGCTTGTGGAGATAGCCACTGCTTGGCGGTAACTATGGAAGGCGAGGTGCAGAGGTTGGTAGATTTCCCAATTCTTATAAACAGTATTTTATCTGTTGCTTTACAGGAGAATAATCTTCCTTTTGTTTTTATCTGGTTTACTATGTTAAAACCCTAGGATTTAAAGGAAAGAGTTTTGTACAAATAAGGAAATACAAGTAATGGAAAAAGTCCAATGGATTATAGAACAAAAGAAAGAAAAATGGGAACAAAATAAAAGAGAGGAAAATTAGAATATTTCCATAATAATCAAACTCTCTTAAGCTGGATAGTATGTGTTAATAACATTCAGCTCGACTCGTATTTCCTTAAATGAGTTCTCCTTTATAGGGTTTTATGAGGATATCGACAATTTGGATCTTGGTTATTCACTCTTTGATTTAGTGACGATCAATTTTCACTTGCTTAAAATGGTCATATTGTATGAGGTATTTGACAATACTTATGGCTGATGCAAATATTAGACGTGCGCAGTGGAATACAGATCAAATTTTACTCTATTTGCATTAAATTAACATGCAAAACGCTCTGTAATTGCTCGTTTCTCCACGCAAGCACGAACTCGGACCACCACTAGTGTTGACCCACTATTCTTCAGACTTAGAACCAGGTTGTGGAATCCAATGAGTGAAGGATTTGAGATAGAGGGAGAGATGGAAATTTGGAGGAATGTCAAAGGTTTCAGAATTAATTTCTTTTGGTGATCAACTAAGAAAGAAAACAATTAAAGGCGAACTTTTTTACAACATTTGAAAAAACTCTCCTTAAATAACCTAACTACATGGATAAATGCATGTAATTAGTTCACCAAAATCTAACACCTCACATACCACTAACACTTAGTGGACTTTAGTGAGTTTGATGTCAATATCTTATGCAACCATATAGCCCACTAGAGTTAGCGGGATTATCCAACAAAATGGTCTCAAAATGTTGGATTTTTTCACTAATTTTGGTCAAAGGGAAATTGGCCTTTTCACCATTTTAGTCAAAGTCAATCTTTAACTTTTTCAAGTAAAAATCAACTTTTTAACTTTTTATCATTTTGTTCGTCTTGATTAATTTTGACCTTCTGAGCATGAATCTGCATTCGTTTTCTCGAAATTCAAATCACATTTGAATATATTGCTAGTCAAAGTTTGGCTTTTTGAATTCAAATATTAACCCTTTGACTTTTTATAACTTTGACCATTTCCATCATTTTTGAGCTTCCAAGTATGAATTCAAATCCATATTTTTGATATTTAAATCACATTTAAACATAAAGTTCTATCTCTAAACTGATAACCTACAGTTATATCACATATATAACTGTTTTTCTCACCTTACCTAATTCGAACTAATCTAACATATTGTTTTAAGTTAATTCCATATGAACTAGCAAAAATGGACCTATAGATCATAGGCTCCAACGATTCGAGATTAATTGACTAAACTCTTTTGGGCCAAGTTAATCAACATTCGTTAACTAACGGGTCATTCCATTAAAGTCTCGTAGTTGCACTCTTCTCACTATAGATATATTTGTGTTAATATGATATAACCATAATTAGTAAGTTAATCATTCACAGGTTGTTCGTAATCTCGACTGGGTCAAAAATACAATTTTACTCCTGAGAATACATCTTGTTCCTTAAGTCTTACTAATCCACTATTGAAAAATTGGTTTAAGGTCCAACCTATTAACCGAATCCTTCTCAAGTTAATGAGAGGGTGGGACCCTTTGTTCAAGACTTGGATTCAGTCCTTAAGGGAATAACCCATCTAATAACCTTATAATGAGCATGTGTGAATTTTATCTTTTATCCTATGTTCTCAGCTATCCATTTGATCTTACCCTTGAAATGGGAAACTTATTTGGCCAACGCTGATGAATTGCACTCACCTACGTAGATCTAATGATAATCCCATGTGAACGAGAGTTCATAGTTAGCTCAAAATTAAGGTGAAGTTACTTAGGTCATTAATAAACGAAATAGTCAGTTTTATACTATAAATGATGTTATAACATAGAAGTGATTATTTCATGATTTAGTCTTATGTAAACTCTTTACATAGGATGCCTCCACTTTCATATCTCTATATGAATGATTCAGGATCACCTTGTTTGTACTAATTATAAAGCGAGTTGCATACATAGTTACCTAGAATAATGTGCCCAACCTTATTTATATACTATAGACCGTTTTGGCTATATACTTAAACTTGATTCACGTTTATGTCTTTACATAAAGTTCAAGTTTACTCAAGATAACCTCAGTTATTTGGATAAGTTATAGTATTCAATTTCACTAATAATTCATCAATAACAAATTTATTGAATAGAATATGACTTTGAATTATAAACTACGAGTTTTAAGACATAAATTTCAACAATGGCTTGGTTATCATGGTAGACCTTTAATAGTTCCTTCTATGTTATTTTAATTTTGATAAGGTGCTTTGTATTTCTATTCCTTTAGAGATCCTTTGTGCAAGGGCTTTTAATTTTAGCTTCATTACCTTTTCTTGATTATTGGGAGTTGTTTGGAGAGCTAAAATGTATTAAACCACCAATTCATCCAAAAGCTTAACCTGGTGGTTGAAGACAAATTTAATTATATATTGCTAACAAAATGTAATCAGGATTACTGAGAATTAGAGGTGTATTGTAAATCAAAATTCAGCCATTTGACAAATAGGATGAAAAGATTATAGATCAGTAGGCTTATAGAGAAACAACGATGAGCATACTGAGGGCCTAAGACATTTGTATTCAGTTCCTGATGAACCATTTTCAGCCATTTGACAAATAGGATGAAAAAAGGAAAAAAACAAGTGGGGTTAGGAGGTGTTACTTGTCATTCTTCCTCCAACGATCTCTCTCGCCTTGTGATTTTGATGAGGACTTGGCTGGTCATATAATGAAGTATCTGATCGTCATCATTTGTACCCAGTTCCTGATGAACCATTTTCTGTTAATCATTTTAATTTCTGATATTTTATAACAAGGGGTTGAGGAAAAGCAGTGTGTGCCAGATACAAAGTTTAGTGCTTCTCTTTTGTCTCCCTCACAGATACTAACGCTTTCCAATTAAAATTGATTTTCACTTGTTGGCCCTTTGACAAACTTTCAGCCACAAGTGAGTGTTGATATAATATTAAACTTGTCATAACTCATCTGTTTGAGTTCTTAGGTTGATGATGATTTAACACTTTTATTTAACTTGATCAATTTATTCATCCTAGAAGAGAGAACTAGAGCATATTCTGGAGCTTTGTTGAAGTCAAGTTATGCTGTGATCTTTGTTCGATTTATTTACTATTTACATGAATGATTTATCTAGTTATCTGTTTTCCTAAATTTATTTCTGTGTGTATATGTATATGTATATTTAATATTTATAAATACGCCTTACTCTGTGTTTATTATTGTATATGGTTGAAGTTGGGGAAGGAATCAAAATGGTCAACTTGGTCTTGGTACCACCGAAGACTCTCTTGTGCCGCAGAAAATCCAAGCATTCGAGGTAATGCTGTTTTTACTGCTATTTCAAATGGATATTCCTGCGATGCAACTTGTGCTTATAAATTTTCTGCTTTATGATTGAAAGCCTCTCAACCTTGGGTAGATAAACTTTGATAATTTTCCTCTGTGGCCTGATTTTGAACTAACGTGCTGGCACATATACATTTACAAAGCATGGAGTATTTCAATTTATTTTCAATTAATTCTTTCTGTCTTGGTCTTTGCTTCAGTCTTTGATGATTGGGCTGCAGATTTCTTTTTGAGCTCTTAATTGGTTGTATTTCGATGTATTGGCTGAATTTGTTCTTTTTTTCATTGTACTTTGAGCATTAGTCTCTCTTTATTTTATCAATAAAAACTTTTGTTTCTTTTTCATAAAATATATCATTTGATAATGAGAAAAGAGAAATAGTATTTGGACAAAATCTTGATATGATATCCTTCATTGGAAATAAATCACACACTCTTATTTTTTGAAGGATCAAGTTCTTGAAAATTATTTAAAGGTGTGACTTGATGCAACTTTTCTGTATTGTTATTACTCTTACGCTAATAGCTTTTTTTATTACTGATCTTTTGGTTTGGCTTCCGTGGGATTTTTTTAATGATATGAGAATTATTATTATTTTAAAGTAGAATTAGCAACTTAAAAGTTTTTATTGGACGGTATTGGAACATAGCAGAAGAATAAATCCCCTTTTGGCTTAATGAATATGGAGATTTCTGGTGAAAGATCCACCTTACGGAGAAAATTGATTGCCTTGAGGTATGGGTAACATCTCTCTCTAAAGGGTGCTTGCAAATATATTGATAGAGTTAAAGAGAGTCTATAGACTGTGCACATTGTGTAGATGTGTTGCTACTAATTTTTGGTCAGATGTTTGGCTTGGGAAATAGGGTGCCGAGGGAGGACTTCCCCTCATTCTTTCACACACATAAAATGGAAGCATCCATCTCTGAACAGTGGAGTAATGAACTGGCTACATGGAGCTTATGGTTTATGAGGAATTTACAGAACTTATATAAAAAAAGGAATATACATAAACTTGATTTAGAATAATGGGATGAGCAAGCACTTTGAATCAACTCTTGAGGATGATGCTTTTGTTATTTTGGCCCATTTTGTTGTATCTTTGTTGAAAGGCTGAGGAAGATTTGGATCCCATTCTTTGGATATGTGAGCTTGCTCGTCATAAAGACATCAGTATCATGACCGGGGAGTTTCTCCTTCTGTCTTTCCGAGGGGAGATTTGGATCCCATTCTTTGGATATGTGAGCTTGCCCATCATAAAGACATTAGTATCATGACTGGGTAGTTTCTCCTCCATCTGTCTTTCCGAGGGAAGGGCCACTTCTTGTGGCTTGTTGGTGCATGTTATTTTGTGAAATCTTTGGAGTGAAAGGAATAATAGAGTGCTTAAAGGTTTGGAGAGGGATCCTACTGGCTTTGGTTTCAAAGTTTTTTTTTTTTTGTTTTTTTGTTTTTACTATTCTATAGGCTTTGTCTTGCTTGGTTGGAGCCCTTTTCTGTACATGGGTTCCCTTTTGAGGCCTTGATTTACAGTCATAGGTATAACCTACAACCTTACGCATTCTAGTTTTCTGTAATTTGTGATCTTATCCAATCCCTCTATAATGTCAATATTGTTTATGAAAAATAGAAAAATATAACTTTTTTATTCTGTAACTTTTTATTCTAAAGTAGGCATTGTAACTTGGTTGCAGGGAATATCTATAAAAATGGTAGCTGCAGGTGCTGAACATACTGCTGCTGTCACGGAAGATGGGGAGCTCTTTGGATGGGGCTGGGGCCGGTATGGAAACTTAGGGTTAGGTGACAGAAACGATCGATTGGTGCCCCAGAAAGTTTCTTCTGTTGATGTATGTTCAATTCTAACATTATCTCTTGTCATAATAAATGGTGATGCAAGGTTTTTACCAAGTCTTTTGAATTAATATACGAAGACACACTTGCTTTTCGGATAAGAATCAAAGTTCTTAGACAAGAAACTTACAAAAGAACGGAATAGACTCAGACCGAAGGAATTACAAAAGTTTTCTTCAATTGGATAAAAGGGTAAAGAGATCATAAAAACGAAAAAAGATGTGCACTTGCATCAAGACAAAGCAAGATAGATAATCTGTTAAAAAACATTTCAAAAGTGCTCTTTTTATAGAGGAGGCGATTGTGCCTTTGGATTAATGATTTATTTAGTAAATTATCAATAATATTTATCTGATGACTGGATTCATTTTTTTTATTAATGTTTTGGGATATAGTCCATGAAAGATGAAAAATAAGATGCAAAACCATTGTTTGGAATTCTAAATTTCAAACAACGGTTTTGCTGCATTGCCATTGACACCCTTTTATCCCACAGGGGACCTGACAAAACGTTAAAACTTCAACCAACTCTGGTAGCGGACAATGTGATGTCCAATTTGCTAGTAGAATTCTTTTTTGAATGGACATGAAATTTTTCACTGAAAAAGTGATGGGGAATGGAACCTTTGACCTTGAGGTTGATAGTACAAACACTATGCTAGTCGTACACTCATGTTGGATTCATTGAAAAAATGGAAAGAGACTAATGTTTAAAATATAAGGACACAAAAGTAAGAAAAGGAAAAAATACATATGAAAAATATGATCCTCTAGGACTCCCCCGATTACATCTTGAGTACAAACACTATACAAAGTCTCAATAAATGAGAAAGAGGTCATGGATTTAGTCCATGGTGGTTAGCTACTTAAGAATTAATTTTCTGAGTTTCCTAGACACTCAAATGTTGTAGAGTTAGGTGGGTTGTTCTATGAGATTAGTTGAGGTGCGCATAACTTGTTCGAGACACTCATGGATATGGAAAAAATGTAAATTTCTTCAACACTAAGATAACCTACTTCCTGGGATCAATGAAGGCCCAACCAAAATCTTTAGGACTTCATAAAGGTTTGGTAAAGAGACTAGGCACTTCCTCCTTTGACTCTTGAACTAAAACATCATCTGGCAAGTCCATGCTGTATTTGTCCTTTTAGTCCTTTTTGCTCTTGGTATATCTCTCTTGTACTTTGAGCATTAGTCTCTTTTATTATCATCAATAAAGAGGCTCGACAATAACTAACCTTAGAAGTGTGAAGAGAGGTTTTCTTAATAAATCAAACCACACTCCTCAATTAAAGAAGAAAACTTGTAAGGGATTTTAGAGGGGGCTAGCAGGCAAAGCTTCAAACACGACCTCTGGGCTGATTTATCCTTAGCTGAACTTTGGAATAATGCTGCAAAATCTTCCCCAGAAATGTCTACAGAATTGATGTCTTCAGGCACTGGGTTTAAGGCCTGGATATCATGCTCATCACTACTTACACTTAAAGAGGAGTTGTCATTGAATATTTTGAGACTGGGAAGCTTTTGGTGAAGAAAATTTTGGCACTTCCTTAATCAACTTGGCCTTTGAATCCAGAAAGGATATAAAAGAACTTGTTAAGTCTTGAGAAGGACGAGAACTTGAGGGAATTTAATAATCTATAATTAATTTGGGATGGTGCATGCATAATCATACAACAATTTAACCTTAGCTGAAAATGAAATGAGATCTCTTTTAGAAGGCCTCTTGTCAAACGATAATGACTAAATGGGTATTTAAGACTGTTTGATATGAGATATGGATACAATTTTTTTTGAGGAGGTTTCTGGAGAGGGGTTGCTTAGGGAGGAGCGAGAAGATGCTAGAGAGAAATAGAGAATGCTTAAAGAGAGTATATTTATGAGGAACCAGAATACTGTACCTTTGAGAATGCATCACTCATGATTCCATGGCCTTGATTTTCTTTTTCCTTTTTTCTTTTTGATGAAAAGCATGACTTTTATTGAGAAAGAGTTCAATAACCAAGCCCACAAAAAGATCTTAATTATTGAATTGAAAATCAAAGATAATAGTAAAGGGAGGTTTTAGTTAATGAATTTACTGTTTCCTGAAAACCACTCTGCCTAACCTGATTGTATTGTATTCATAAAACCCCTTAATTTTAGAAGCTTAAAAAAGAAAGCGGATTCAATGTCAAAAATGGCCCTAAAATTCTTTCCGTGTGGACTTATAATTCATGATTATTGCTTTATTCTTCTATCTACTTCTGAGCTATCTTGCGATCTTACGTTGGCAGGGTGACAAGATGGTGATGGTTGCTTGTGGATGGCGGCATACGATATCAGTTTCCTCCTTGGGTGGATTATACACCTATGGATGGAGCAAATATGGACAACTAGGACATGGAGATTTTGAGGATCGCCTTGTGCCTCACAGGCTAGAAGCATTGCGTGGAGATAATATTTCTCAGGTGGATTTTCTGCAGTTCATACTAGATGTGTTCCTATGCCGAATCTTACTCATGAAAATTTGACTCGTAGGGGGTGTTTGGTTAGCGATAAAAACAAAGAGTTGAGTTGAGTTGGTAATAATTATAGGGAAGTTATTGGAGGAGTTGACACGAATAACAAAGTGACAAATGTGAGTGTTTTAGTGAGAAATGTGAGTTGATGCAAATAATGAGGTAATAAGCCTCTTTAGTTATTGGTGAATCAAACAGTGAGTTGGTTTTTCTTACCCATCCAACCCAACTCTCCCAAATTATCCAAGTTAACTGAACACCCCCTTGAGAAGATGACAGATTCTTAGAATCTCTAGAGCAGAAAGGCTGAGTTCAAATCTTATCTTTGTTACTCGTATTTGTGTTTAACAACCTGTGGGGTAGAAAGATTCAAATCTCAAAGGTTCAGGGTACTTAGTATTATCAATTATGGTAGTATGGACAACTTTTCATACTACTACCTTTTATTGAATGCCATAAAATAGGCATTAAAGAATTCTGTGTGACTTGGAAACTAAATAATATATGATATGAACGAAAGGAGTATGGACTACAGTGTACTAGAAAGTCTAGAATTCTTTTCATATATGCCTTAACTGAGTTATTCTTAGGTTGCCAGTGCTAGAAATATATTTAAATTCTTTGTTCCTGTAAGAAATCGACAGCAAGTTTATGAACTCTTTTCTTGATAGCAAGTGCATGAATGGTTTTCTTGATTGAGTCTATAGAAGTTCCATACAGGGGAGGTGCCGTGGGAAAATTTTGAGATGTTAAATTAAATTATTCTGACACTTTAGTATGAGATTCTATGAAAAGTACCAATTCGATAGTTTTCTCTTTTTGTTCAGCGAGGACTAGACTGGAGAGTTTGGAGGTAGATTGTGAGAGCATGAGTGCATGCTGAACTAAATTTTGACTGGAAATAATGCTGTTGACATGAAAATGCTGGAAGTGAATTGCTTTATGAGGATTCTTTTGCTGTGATTATCACGGTACCACATGAAACTGGATAACATTTGATGAACTCATTAACAATAAACAATTCTCATGTCATTTAGATGCCTTTACCGTAATTCTTTTTTTTCCCCCTTCCAAGATTGTAACGAGGCATTGTTGTCTCAAAATTTTCAGATATCAGGTGGTTGGAGGCATACAATGGCACTTACAACTGATGGAAAACTGTATGGATGGGGCTGGAACAAGGTTTGTCCATTGGATTCCCCTTGTAATTCATTTTAAATTTGTAGTTGTTGTAAGTAGTGTTTATGTTTCTTTTTGAACTAGAGACAACTTTTCCTTGAAGGTTCAAGATGAAGTTTGGTGGGGGTCAATTATTTTCTATGCTGTGTTTTGGCTAAAAATTACTGAGAATCTTCAGCAACTCTTTCTGAAACTATGACCAACTGTAGGAGATCATAGTTTTTGTCTGTCTTTTTTATGTGTATCCAAGATTTTATCATCATGATTATAACTTTTTATTAATTTATTTTCTGTAATTACTCTCTAAACTTCATAGTTCAATTGAGACTTATTTGTGTCTCTCTTTAGTACATTTCATTATATCAGATACATTATTTTTTCCTTCTTAAAAAAACTTAATGGATAATGTAATGCGTCTTAAAGAATTTGCTTAACAAATTAATGAAAAATAAGCTTGTTGTTTCTAAAGAAATCTATGTTTTGACAAATAAATATAATGGATGTGGAGTTGCATTCTTGCAGATGCTATGTTCTGAGCTTTTTACTTATTTTGCTACTTTTGTTGACCTTTTAACTTTATTTTCAATCACTTAAAAAGTTAAAGTGCATTGTTTCTTGTCTTTACTTAGTTTGTTTGATAATATAGTGGGCATTGATCTCATAATTTTCTCTCTTCACGTACAGTTTGGGCAGGTTGGAGCTGGTGATAACATTGATCATTGCTCTCCGATACAAATAAAGTTTCCCCAGGACCAGGTACATCCTTGTTACTTAGCTAAGAATTTTTTAAGCTTGTCATATATTTTTGTTCTGTGAAAATATCTTTATAAGAATAAAGATGGAGACATGATTTGATCTTTCTTGCTCTCTTGTCAGAAAGTAATTCAGATCTCATGTGGATGGAGGCACACACTAGCTGTTACTGATAAGCAAAATGTGTTTTCTTGGGGTAGAGGTACAAATGGACAGCTTGGACATGGGGAGTCAGTTGATCGGTAAAATATGTGCTTGGACTAATATACGTGTTATGCAAAATACTTCTACTGCAGTATTGTTTATTTTCTTTCCCTTTAGAACCCTCAATACTACTTTTGTTTTGATTGCTTGTTTCAGTTTTGACTTCTCTTACATATATTTTATATAGTTTTCTTTTAAATGAATATTAGCTCAACTTTTGCCGGTGGTTTGTTTTAGTTTTATAGTTTCCTGTATCTTATTCTCTTGATGCAATCAATCATCATGTGAGAAAATCTCTACGAATTTTCACAAGGCTGATTCTTTCGTTTCCTATTTTCTATCTCTTTGTAAGCATTAGTCTCTTTTCATCTCAGTACTAAAAATTGTGTTTGTCATTTCTATGAATCTTCAAAAGAAGAAGCTAATTACAAGAGATTAATGAGTTAATGTACAACCTACTTCTTGGGTTATTATAAAAGCTTGGTTATTATTTATTTATTTATTTATTCTCATAGCATTTTTGGCTTTTAAAGATCAGTTGGTGTAAGTTATGTGTCATGATGGGTTAAGTCTATACTGGGTAATTTTTTATGGTAGAAAGATTTGTTTTTTCAATAGGGTATTGAAAATTTTGGATTGAGCAGAACTGTTTTATTTCGTAGGGTAAGGATTATAATGAGTTCAGAGCTGCACGGTTTCTCTAGTTTAGTCTTTCCTTGCTGGATGTCTATCTTTGTTTTTTCAGCAATTCTACTTCAAAGTTGTACAATGGGACTGATGAAATCTATTCTTTAATTGAAGGAACACACCAATGATCCTCGAAGCTTTGAGCGTTGATGGTTGTAGTGGTCAACAGATTGAATCCTCAAATATAGATCCGTCTTCAGGTACTGCTTTGTTTTACTTATAGTTTCCACGTTCATGGGTGCATTTGCAAATATTTATATCGTACAATTATGCTATTTCTTGTGCAGGAAAAACTTGGGTATCGCCAACAGAAAGATATGCAATTGTTCCTGATGAATCTGTAAGCATTGTTTTATTTAGTCTTTCCATTTTTATGACATAATATTTGAGTAGTTAGTCTTTTGATCTTTAAGACAGCCAAAGAATCATTATATTTTTAAATTCTGAAAGGCAACAATTGCCATGCTTACATTCTTTTGTTCTTGTATTTATGTTTCTGAAATGCATTATAACAAGCAAGATGGGATTTTTGAGTAAGGTGGCTTTGAGCTTTATTCTCTACCCTTTTTTATCATGATAACCTTTACATTGAGCGTAAGTCAATTGGCAAACGAGTGTATTAGTAAGTACAAGGTCTGTGGTTCAAATCCCTCAACTCCAATTGGACTCAGTTCAGTCTTCCCATACTGGTTTGCTCTACCTGCAAATGGCTGTAGTGATATCATTGCTTGATGGAAAACTACTATTGATATCTATAGAGCTTATGATACACGAGTATAATGTTAAATCATCTTGGAACTGAAAAGCATAGGCTAAAAGAATAGGAGAGATTAATCTCTCCTAGTGGAAATCAGTATGAATTGAGAAAATTGATAACATGTTAAATCATTGATCAGTGAATAAGTTACGGTAAATTTAGTTATACCAATACTTTTAACAGATATCTGATAACATGAGAGGAAGGGCATTTCCTGTGATTGGGGAACGGAATTCCTTCGGGTGTTTCCTTTGGTTTGTTGGAGTGTGTTCTGTGATTTGAGGACTGTGGGGAGCAGAAACAATAGAGGGTTTCAAGTCTCTATTTGGACTTCAGTTTTGATGGTCTGCAGTATTTTACCTGGTTGGAAACACTTTGTTTAATGGGTTTATTTGGGGGGGGGGACTTGTTTTCTGTGGATGATCTTGTATTCTTTCAACTTTTCTCAATAAATGTTATTGATTCTATTAAAAGAATAACAATAATAATAATAAAAACAGATATCTGATGTAAAAAAATTGGTGGAAAATCTGGGTATGATGTTAAACAGAAGTTAATGGTGGGTATGATATTGTTTGTCCAGGTACAGGTACAGGTACAGGGGCCATCAACATCTGTTAGGGGTAACGGGAGTGATGCCAACGTTCCCGAAAATGATGTAAAAAGGTTACGTGTCTGATTTGGTACGACGTGGAAAGATGTTAGCTGCACTGATTCACTGATTAATGTAAATTCTGTGTATTTGGTTAGAAATGTAGTGGGTAGGGCCAGGGGTAAGGGAGACCTATATATGAGAGTTTTAACCCACAGTTTTTGGGTCTAAATGTTCCTTCTTTTATTTTGTTTGGGTTTAAATAATCTTCAGTTCCAACAATGACTTTCCTGCTTGCTTTTATGGCATGAAAATTAGTAACCTATCTACACAATTCATATGCATTTTCTTCTTTATTTGAAGCCTCCAAGGGCATGAATTTCTGTTTCCTTTATTTATTTACGAGTATTAAGTTAAGAAAAGGGGCATAAAAGTATGAACTCCAATTATGAGATGATTTTCTATTGACGTTGTCA

Coding sequence (CDS)

ATGGAAGCGACTTCTCCAGTTCGTCGTGTGCTTTTCATCTCCGCGGGTGCTAGTCATTCGGTTGCTCTTCTTTCTGGAAATATTGTTTGTTCTTGGGGACGTGGAGAAGATGGTCAATTAGGTCATGGAGATGCTGAAGATCGATTGTCACCAACACAATTGAGTGCATTGGATGGCCATGAAATAGTATCTGTTACTTGTGGAGCTGATCATACAACAGCTTATTCTGTAGCACGAACAGAAGTTTATAGTTGGGGATGGGGTGACTTTGGGAGGTTAGGTCATGGTAATTCTAGTGATTTGTTTACACCGAAGCCAATTAAAGCATTGCATGGTCTTAAGATAAGGCAAATTGCTTGTGGAGATAGCCACTGCTTGGCGGTAACTATGGAAGGCGAGGTGCAGAGTTGGGGAAGGAATCAAAATGGTCAACTTGGTCTTGGTACCACCGAAGACTCTCTTGTGCCGCAGAAAATCCAAGCATTCGAGGGAATATCTATAAAAATGGTAGCTGCAGGTGCTGAACATACTGCTGCTGTCACGGAAGATGGGGAGCTCTTTGGATGGGGCTGGGGCCGGTATGGAAACTTAGGGTTAGGTGACAGAAACGATCGATTGGTGCCCCAGAAAGTTTCTTCTGTTGATGGTGACAAGATGGTGATGGTTGCTTGTGGATGGCGGCATACGATATCAGTTTCCTCCTTGGGTGGATTATACACCTATGGATGGAGCAAATATGGACAACTAGGACATGGAGATTTTGAGGATCGCCTTGTGCCTCACAGGCTAGAAGCATTGCGTGGAGATAATATTTCTCAGATATCAGGTGGTTGGAGGCATACAATGGCACTTACAACTGATGGAAAACTGTATGGATGGGGCTGGAACAAGTTTGGGCAGGTTGGAGCTGGTGATAACATTGATCATTGCTCTCCGATACAAATAAAGTTTCCCCAGGACCAGAAAGTAATTCAGATCTCATGTGGATGGAGGCACACACTAGCTGTTACTGATAAGCAAAATGTGTTTTCTTGGGGTAGAGGTACAAATGGACAGCTTGGACATGGGGAGTCAGTTGATCGGAACACACCAATGATCCTCGAAGCTTTGAGCGTTGATGGTTGTAGTGGTCAACAGATTGAATCCTCAAATATAGATCCGTCTTCAGGAAAAACTTGGGTATCGCCAACAGAAAGATATGCAATTGTTCCTGATGAATCTGTACAGGTACAGGTACAGGGGCCATCAACATCTGTTAGGGGTAACGGGAGTGATGCCAACGTTCCCGAAAATGATGTAAAAAGGTTACGTGTCTGA

Protein sequence

MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNIDHCSPIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTPMILEALSVDGCSGQQIESSNIDPSSGKTWVSPTERYAIVPDESVQVQVQGPSTSVRGNGSDANVPENDVKRLRV

Homology

[Close]

BLAST of Cucsat.G6760 vs. ExPASy Swiss-Prot
Match: Q9FN03 (Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1)

HSP 1 Score: 498.4 bits (1282), Expect = 5.2e-140
Identity = 234/278 (84.17%), Postives = 250/278 (89.93%), Query Frame = 0


Query: 2   EATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHE 61
           E T+P R+VL ISAGASHSVALLSG+IVCSWGRGEDGQLGHGDAEDR SPTQLSALDGH+
Sbjct: 9   EVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ 68

Query: 62  IVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIACG 121
           IVSVTCGADHT AYS +  EVYSWGWGDFGRLGHGNSSDLFTP PIKALHG++I+QIACG
Sbjct: 69  IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128

Query: 122 DSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVT 181
           DSHCLAVTMEGEVQSWGRNQNGQLGLG TEDSLVPQKIQAFEGI IKMVAAGAEHTAAVT
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVT 188

Query: 182 EDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTY 241
           EDG+L+GWGWGRYGNLGLGDR DRLVP++V+S  G+KM MVACGWRHTISVS  G LYTY
Sbjct: 189 EDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTY 248

Query: 242 GWSKYGQLGHGDFEDRLVPHRLEALRGDNISQRGLDWR 280
           GWSKYGQLGHGD ED L+PH+LEAL    ISQ    WR
Sbjct: 249 GWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWR 286

[Close]

BLAST of Cucsat.G6760 vs. ExPASy Swiss-Prot
Match: Q5GLZ8 (Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens OX=9606 GN=HERC4 PE=1 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 7.2e-49
Identity = 104/268 (38.81%), Postives = 155/268 (57.84%), Query Frame = 0


Query: 8   RRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 67
           +RV  +  G  H+V +L    V + G  + GQLGH   + R  P Q+ ALD   IV+V+C
Sbjct: 34  KRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSC 93

Query: 68  GADHTTAYSVARTEVYSWGWGDFGRLG-HGNSSDLFTPKPIKALHGLKIRQIACGDSHCL 127
           G  HT A +  + +VY+WG    G+LG  G+   +  P+ IK+L  ++I Q+ACG  H L
Sbjct: 94  GEAHTLALN-DKGQVYAWGLDSDGQLGLVGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 153

Query: 128 AVTMEGEVQSWGRNQNGQLGLGT-TEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGE 187
           A++   EV  WG+N+ GQLGLGT  +    PQ +++  GI    VAAG  H+  +T  G 
Sbjct: 154 ALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGA 213

Query: 188 LFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSK 247
           +FGWG  ++G LGL D NDR VP  + S+   K+V + CG  HT +++  GG++T+G   
Sbjct: 214 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 273

Query: 248 YGQLGHGDFEDRLVPHRLEALRGDNISQ 274
           YGQLGH      + P ++  L G  +++
Sbjct: 274 YGQLGHNSTSHEINPRKVFELMGSIVTE 298

[Close]

BLAST of Cucsat.G6760 vs. ExPASy Swiss-Prot
Match: Q5PQN1 (Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus OX=10116 GN=Herc4 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 7.2e-49
Identity = 104/268 (38.81%), Postives = 154/268 (57.46%), Query Frame = 0


Query: 8   RRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 67
           ++V  +  G  H+V +L    V + G  + GQLGH   + R  P Q+ ALD   IV+V+C
Sbjct: 34  KKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSC 93

Query: 68  GADHTTAYSVARTEVYSWGWGDFGRLG-HGNSSDLFTPKPIKALHGLKIRQIACGDSHCL 127
           G  HT A +  + +VY+WG    G+LG  G+   +  P+ IK+L  ++I Q+ACG  H L
Sbjct: 94  GEAHTLALN-DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 153

Query: 128 AVTMEGEVQSWGRNQNGQLGLG-TTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGE 187
           A++   EV  WG+N+ GQLGLG   +    PQ I++  GI    VAAG  H+  +T  G 
Sbjct: 154 ALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 213

Query: 188 LFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSK 247
           +FGWG  ++G LGL D NDR VP  + S+   K+V + CG  HT +++  GG++T+G   
Sbjct: 214 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 273

Query: 248 YGQLGHGDFEDRLVPHRLEALRGDNISQ 274
           YGQLGH      + P ++  L G  ++Q
Sbjct: 274 YGQLGHNSTSHEINPRKVFELMGSIVTQ 298

[Close]

BLAST of Cucsat.G6760 vs. ExPASy Swiss-Prot
Match: Q6PAV2 (Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus OX=10090 GN=Herc4 PE=1 SV=2)

HSP 1 Score: 195.3 bits (495), Expect = 9.4e-49
Identity = 104/268 (38.81%), Postives = 153/268 (57.09%), Query Frame = 0


Query: 8   RRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 67
           ++V  +  G  H+V +L    V + G  + GQLGH   + R  P Q+ ALD   IV+V C
Sbjct: 34  KKVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVAC 93

Query: 68  GADHTTAYSVARTEVYSWGWGDFGRLG-HGNSSDLFTPKPIKALHGLKIRQIACGDSHCL 127
           G  HT A +  + +VY+WG    G+LG  G+   +  P+ IK+L  ++I Q+ACG  H L
Sbjct: 94  GEAHTLALN-DKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSL 153

Query: 128 AVTMEGEVQSWGRNQNGQLGLG-TTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGE 187
           A++   EV  WG+N+ GQLGLG   +    PQ I++  GI    VAAG  H+  +T  G 
Sbjct: 154 ALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGA 213

Query: 188 LFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSK 247
           +FGWG  ++G LGL D NDR VP  + S+   K+V + CG  HT +++  GG++T+G   
Sbjct: 214 IFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGG 273

Query: 248 YGQLGHGDFEDRLVPHRLEALRGDNISQ 274
           YGQLGH      + P ++  L G  ++Q
Sbjct: 274 YGQLGHNSTSHEINPRKVFELMGSIVTQ 298

[Close]

BLAST of Cucsat.G6760 vs. ExPASy Swiss-Prot
Match: Q15034 (Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens OX=9606 GN=HERC3 PE=1 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 6.1e-48
Identity = 103/268 (38.43%), Postives = 151/268 (56.34%), Query Frame = 0


Query: 8   RRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 67
           R V  ++ G +HSV LL    V + G    GQLGH    +   P Q+ AL    I+ V C
Sbjct: 34  RSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLGH--EREGNKPEQIGALADQHIIHVAC 93

Query: 68  GADHTTAYSVARTEVYSWGWGDFGRLGHGNSSD-LFTPKPIKALHGLKIRQIACGDSHCL 127
           G  H+ A S  R +++SWG G  G+LG   + D +  P+ I+ L+   I Q++CG+ HCL
Sbjct: 94  GESHSLALS-DRGQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCL 153

Query: 128 AVTMEGEVQSWGRNQNGQLGLGTTEDSLV-PQKIQAFEGISIKMVAAGAEHTAAVTEDGE 187
           A+  +G+  +WG+N +GQLGLG    S   PQ++++ EGI +  VAAG  H+ A++  G 
Sbjct: 154 ALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGA 213

Query: 188 LFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSK 247
           +FGWG    G LGL D  DR  P  V  +   K+V ++CG  HT  ++  GG++T+G   
Sbjct: 214 VFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGS 273

Query: 248 YGQLGHGDFEDRLVPHRLEALRGDNISQ 274
            GQLGH    D + P R+  L G  ++Q
Sbjct: 274 CGQLGHDSMNDEVNPRRVLELMGSEVTQ 298

[Close]

BLAST of Cucsat.G6760 vs. NCBI nr
Match: XP_011653892.1 (ultraviolet-B receptor UVR8 [Cucumis sativus] >XP_031740152.1 ultraviolet-B receptor UVR8 [Cucumis sativus] >KGN54782.1 hypothetical protein Csa_012702 [Cucumis sativus])

HSP 1 Score: 568 bits (1464), Expect = 7.22e-202
Identity = 275/279 (98.57%), Postives = 275/279 (98.57%), Query Frame = 0


Query: 1   MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH 60
           MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH
Sbjct: 1   MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH 60

Query: 61  EIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC 120
           EIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC
Sbjct: 61  EIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC 120

Query: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV 180
           GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV
Sbjct: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV 180

Query: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240
           TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT
Sbjct: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240

Query: 241 YGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQRGLDWR 279
           YGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQ    WR
Sbjct: 241 YGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWR 279

[Close]

BLAST of Cucsat.G6760 vs. NCBI nr
Match: XP_008442146.1 (PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Cucumis melo])

HSP 1 Score: 559 bits (1441), Expect = 1.98e-198
Identity = 271/279 (97.13%), Postives = 271/279 (97.13%), Query Frame = 0


Query: 1   MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH 60
           MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDR SPTQLSALDGH
Sbjct: 1   MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRFSPTQLSALDGH 60

Query: 61  EIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC 120
           EIVSVTCGADHTTAYS ARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC
Sbjct: 61  EIVSVTCGADHTTAYSEARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC 120

Query: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV 180
           GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGI IKMVAAGAEHTAAV
Sbjct: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAV 180

Query: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240
           TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT
Sbjct: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240

Query: 241 YGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQRGLDWR 279
           YGWSKYGQLGHGDFEDRLVPHRLEAL GDNISQ    WR
Sbjct: 241 YGWSKYGQLGHGDFEDRLVPHRLEALCGDNISQISGGWR 279

[Close]

BLAST of Cucsat.G6760 vs. NCBI nr
Match: XP_038882652.1 (ultraviolet-B receptor UVR8 isoform X2 [Benincasa hispida] >XP_038882653.1 ultraviolet-B receptor UVR8 isoform X2 [Benincasa hispida] >XP_038882654.1 ultraviolet-B receptor UVR8 isoform X2 [Benincasa hispida])

HSP 1 Score: 557 bits (1436), Expect = 1.14e-197
Identity = 268/279 (96.06%), Postives = 272/279 (97.49%), Query Frame = 0


Query: 1   MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH 60
           MEATSPVRRVLFIS GASHSVALLSGN+VCSWGRGEDGQLGHGDAEDRLSPTQLSAL+GH
Sbjct: 1   MEATSPVRRVLFISGGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSALNGH 60

Query: 61  EIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC 120
           EIVSVTCGADHTTAYS ARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGL+IRQIAC
Sbjct: 61  EIVSVTCGADHTTAYSEARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRIRQIAC 120

Query: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV 180
           GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV
Sbjct: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV 180

Query: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240
           TEDGELFGWGWGRYGNLGLGDRNDRL+PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT
Sbjct: 181 TEDGELFGWGWGRYGNLGLGDRNDRLIPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240

Query: 241 YGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQRGLDWR 279
           YGWSKYGQLGHGDFEDRLVPHRLEAL GDNISQ    WR
Sbjct: 241 YGWSKYGQLGHGDFEDRLVPHRLEALCGDNISQISGGWR 279

[Close]

BLAST of Cucsat.G6760 vs. NCBI nr
Match: KAA0041325.1 (ultraviolet-B receptor UVR8 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 556 bits (1432), Expect = 1.79e-195
Identity = 269/279 (96.42%), Postives = 269/279 (96.42%), Query Frame = 0


Query: 1   MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH 60
           MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDR SPTQLSALDGH
Sbjct: 103 MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRFSPTQLSALDGH 162

Query: 61  EIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC 120
           EIVSVTCGADHTTAYS  RTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC
Sbjct: 163 EIVSVTCGADHTTAYSETRTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC 222

Query: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV 180
           GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEG  IKMVAAGAEHTAAV
Sbjct: 223 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGTPIKMVAAGAEHTAAV 282

Query: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240
           TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT
Sbjct: 283 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 342

Query: 241 YGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQRGLDWR 279
           YGWSKYGQLGHGDFEDRLVPHRLEAL GDNISQ    WR
Sbjct: 343 YGWSKYGQLGHGDFEDRLVPHRLEALCGDNISQISGGWR 381

[Close]

BLAST of Cucsat.G6760 vs. NCBI nr
Match: KAG6595606.1 (Ultraviolet-B receptor UVR8, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 546 bits (1407), Expect = 1.15e-194
Identity = 263/279 (94.27%), Postives = 269/279 (96.42%), Query Frame = 0


Query: 1   MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH 60
           MEATSPVRRVLFISAGASHSVALLSGN+VCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH
Sbjct: 6   MEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH 65

Query: 61  EIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC 120
           EI+SVTCGADHT AYS A TEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGL+IRQIAC
Sbjct: 66  EIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRIRQIAC 125

Query: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV 180
           GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTED+LVPQKIQAF+GISIKMVAAGAEHTAAV
Sbjct: 126 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAEHTAAV 185

Query: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240
           TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVD DKMVMVACGWRHTISVSS GGLYT
Sbjct: 186 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSSGGLYT 245

Query: 241 YGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQRGLDWR 279
           YGWSKYGQLGHGDFEDRLVPHRLEAL GD+ISQ    WR
Sbjct: 246 YGWSKYGQLGHGDFEDRLVPHRLEALCGDSISQISGGWR 284

[Close]

BLAST of Cucsat.G6760 vs. ExPASy TrEMBL
Match: A0A0A0L2E7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G496230 PE=4 SV=1)

HSP 1 Score: 568 bits (1464), Expect = 3.49e-202
Identity = 275/279 (98.57%), Postives = 275/279 (98.57%), Query Frame = 0


Query: 1   MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH 60
           MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH
Sbjct: 1   MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH 60

Query: 61  EIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC 120
           EIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC
Sbjct: 61  EIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC 120

Query: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV 180
           GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV
Sbjct: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV 180

Query: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240
           TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT
Sbjct: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240

Query: 241 YGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQRGLDWR 279
           YGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQ    WR
Sbjct: 241 YGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWR 279

[Close]

BLAST of Cucsat.G6760 vs. ExPASy TrEMBL
Match: A0A1S3B513 (ultraviolet-B receptor UVR8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486094 PE=4 SV=1)

HSP 1 Score: 559 bits (1441), Expect = 9.60e-199
Identity = 271/279 (97.13%), Postives = 271/279 (97.13%), Query Frame = 0


Query: 1   MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH 60
           MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDR SPTQLSALDGH
Sbjct: 1   MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRFSPTQLSALDGH 60

Query: 61  EIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC 120
           EIVSVTCGADHTTAYS ARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC
Sbjct: 61  EIVSVTCGADHTTAYSEARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC 120

Query: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV 180
           GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGI IKMVAAGAEHTAAV
Sbjct: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAV 180

Query: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240
           TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT
Sbjct: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240

Query: 241 YGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQRGLDWR 279
           YGWSKYGQLGHGDFEDRLVPHRLEAL GDNISQ    WR
Sbjct: 241 YGWSKYGQLGHGDFEDRLVPHRLEALCGDNISQISGGWR 279

[Close]

BLAST of Cucsat.G6760 vs. ExPASy TrEMBL
Match: A0A5A7TIS4 (Ultraviolet-B receptor UVR8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G003270 PE=4 SV=1)

HSP 1 Score: 556 bits (1432), Expect = 8.68e-196
Identity = 269/279 (96.42%), Postives = 269/279 (96.42%), Query Frame = 0


Query: 1   MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH 60
           MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDR SPTQLSALDGH
Sbjct: 103 MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRFSPTQLSALDGH 162

Query: 61  EIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC 120
           EIVSVTCGADHTTAYS  RTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC
Sbjct: 163 EIVSVTCGADHTTAYSETRTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC 222

Query: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV 180
           GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEG  IKMVAAGAEHTAAV
Sbjct: 223 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGTPIKMVAAGAEHTAAV 282

Query: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240
           TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT
Sbjct: 283 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 342

Query: 241 YGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQRGLDWR 279
           YGWSKYGQLGHGDFEDRLVPHRLEAL GDNISQ    WR
Sbjct: 343 YGWSKYGQLGHGDFEDRLVPHRLEALCGDNISQISGGWR 381

[Close]

BLAST of Cucsat.G6760 vs. ExPASy TrEMBL
Match: A0A6J1HRA4 (ultraviolet-B receptor UVR8 OS=Cucurbita maxima OX=3661 GN=LOC111466009 PE=4 SV=1)

HSP 1 Score: 546 bits (1407), Expect = 1.78e-193
Identity = 262/279 (93.91%), Postives = 269/279 (96.42%), Query Frame = 0


Query: 1   MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH 60
           MEATSPVRRVLFISAGASHSVALLSGN+VCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH
Sbjct: 6   MEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH 65

Query: 61  EIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC 120
           EI+SVTCGADHT AYS A TEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGL+IRQIAC
Sbjct: 66  EIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRIRQIAC 125

Query: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV 180
           GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTED+LVPQKIQAF+GISIKMVAAGAEHTAAV
Sbjct: 126 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAEHTAAV 185

Query: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240
           TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVD DKMVMVACGWRHTISVS  GGLYT
Sbjct: 186 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSFSGGLYT 245

Query: 241 YGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQRGLDWR 279
           YGWSKYGQLGHGDFEDRLVPHR+EALRGD+ISQ    WR
Sbjct: 246 YGWSKYGQLGHGDFEDRLVPHRIEALRGDSISQISGGWR 284

[Close]

BLAST of Cucsat.G6760 vs. ExPASy TrEMBL
Match: A0A6J1EER4 (ultraviolet-B receptor UVR8 OS=Cucurbita moschata OX=3662 GN=LOC111432565 PE=4 SV=1)

HSP 1 Score: 546 bits (1406), Expect = 2.52e-193
Identity = 262/279 (93.91%), Postives = 269/279 (96.42%), Query Frame = 0


Query: 1   MEATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH 60
           MEATSPVRRVLFISAGASHSVALLSGN+VCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH
Sbjct: 6   MEATSPVRRVLFISAGASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGH 65

Query: 61  EIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIAC 120
           EI+SVTCGADHT AYS A TEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGL+IRQIAC
Sbjct: 66  EIISVTCGADHTIAYSEACTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLRIRQIAC 125

Query: 121 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAV 180
           GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTED+LVPQKIQAF+GISIKMVAAGAEHTAAV
Sbjct: 126 GDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDALVPQKIQAFQGISIKMVAAGAEHTAAV 185

Query: 181 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 240
           TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVD DKMVMVACGWRHTISVSS GGLYT
Sbjct: 186 TEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDDDKMVMVACGWRHTISVSSSGGLYT 245

Query: 241 YGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQRGLDWR 279
           YGWSKYGQLGHGDFEDRL+PHRLEAL GD+ISQ    WR
Sbjct: 246 YGWSKYGQLGHGDFEDRLIPHRLEALCGDSISQISGGWR 284

[Close]

BLAST of Cucsat.G6760 vs. TAIR 10
Match: AT5G63860.1 (Regulator of chromosome condensation (RCC1) family protein )

HSP 1 Score: 498.4 bits (1282), Expect = 3.7e-141
Identity = 234/278 (84.17%), Postives = 250/278 (89.93%), Query Frame = 0


Query: 2   EATSPVRRVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHE 61
           E T+P R+VL ISAGASHSVALLSG+IVCSWGRGEDGQLGHGDAEDR SPTQLSALDGH+
Sbjct: 9   EVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ 68

Query: 62  IVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKALHGLKIRQIACG 121
           IVSVTCGADHT AYS +  EVYSWGWGDFGRLGHGNSSDLFTP PIKALHG++I+QIACG
Sbjct: 69  IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128

Query: 122 DSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVT 181
           DSHCLAVTMEGEVQSWGRNQNGQLGLG TEDSLVPQKIQAFEGI IKMVAAGAEHTAAVT
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVT 188

Query: 182 EDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTY 241
           EDG+L+GWGWGRYGNLGLGDR DRLVP++V+S  G+KM MVACGWRHTISVS  G LYTY
Sbjct: 189 EDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTY 248

Query: 242 GWSKYGQLGHGDFEDRLVPHRLEALRGDNISQRGLDWR 280
           GWSKYGQLGHGD ED L+PH+LEAL    ISQ    WR
Sbjct: 249 GWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWR 286

[Close]

BLAST of Cucsat.G6760 vs. TAIR 10
Match: AT1G69710.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain )

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-40
Identity = 97/273 (35.53%), Postives = 146/273 (53.48%), Query Frame = 0


Query: 13  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 72
           I+ G  H+V +     + SWG G+ G+LGHG   D   P  +S++ G    S+ CG  HT
Sbjct: 305 IACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACGDFHT 364

Query: 73  TAYSVARTEVYSWGWG--DFGRLGHGNSSDLFTPKPIKA-LHGLKIRQIACGDSHCLAVT 132
            A + +  ++YSWG G  +   LGHGN S  + PK +   L GL +  +ACG  H   V 
Sbjct: 365 CAITQS-GDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVA 424

Query: 133 MEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTE------- 192
             G++ ++G    G LG G    + VP+++++  G+ +  VA G  HTAAV E       
Sbjct: 425 SSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVEVTNEASE 484

Query: 193 ------DGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLG 252
                  G++F WG G  G LG GD + +L+P+ V S+  + +  VACG   T+S +S G
Sbjct: 485 AEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGHSLTVSRTSRG 544

Query: 253 GLYTYGWSKYGQLGH----GDFEDRLVPHRLEA 266
            +YT G + YGQLG+    G+F +R+    +EA
Sbjct: 545 HVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEA 576

[Close]

BLAST of Cucsat.G6760 vs. TAIR 10
Match: AT5G12350.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain )

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-39
Identity = 92/265 (34.72%), Postives = 139/265 (52.45%), Query Frame = 0


Query: 13  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 72
           I+ G  H+V +       SWG   +G+LGHG   +   P  + AL+   I  V CG  H+
Sbjct: 313 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACGEFHS 372

Query: 73  TAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIK-ALHGLKIRQIACGDSHCLAVTME 132
            A +++  ++Y+WG GDFG LGHGN    + PK +   L G+ +  IACG  H   VT  
Sbjct: 373 CAVTLS-GDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVTSA 432

Query: 133 GEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTE--------- 192
           G++ ++G    G LG G  +   +P+++ + +G+     A G  HTAAV E         
Sbjct: 433 GQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 492

Query: 193 ---DGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLY 252
               G+LF WG G  G LG G++  +LVP  V+++       VACG   T+++++ G +Y
Sbjct: 493 NCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVY 552

Query: 253 TYGWSKYGQLGHGDFEDRLVPHRLE 265
           T G   YGQLG+    D   P+R+E
Sbjct: 553 TMGSPVYGQLGN-SHADGKTPNRVE 575

[Close]

BLAST of Cucsat.G6760 vs. TAIR 10
Match: AT3G53830.1 (Regulator of chromosome condensation (RCC1) family protein )

HSP 1 Score: 159.1 bits (401), Expect = 5.3e-39
Identity = 85/253 (33.60%), Postives = 133/253 (52.57%), Query Frame = 0


Query: 9   RVLFISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLS------------------ 68
           R+  ++ G  H++AL     +  WG G +GQLG G     +S                  
Sbjct: 215 RITSVATGGRHTLALSDLGQIWGWGYGGEGQLGLGSRIKMVSSPHLIPCLESIGSGKERS 274

Query: 69  -----------PTQLSALDGHEIVSVTCGADHTTAYSVARTEVYSWGWGDFGRLGHGNSS 128
                        Q S   G  I +++CG  H+ A + A   + ++GWG +G+ GHGN++
Sbjct: 275 FILHQGGTTTTSAQASREPGQYIKAISCGGRHSAAITDA-GGLITFGWGLYGQCGHGNTN 334

Query: 129 DLFTPKPIKALHGLKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQKI 188
           D   P  +  +  +++  +A G  H + ++ +G+V ++G NQ GQLG GT    ++P+ +
Sbjct: 335 DQLRPMAVSEVKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGTDHAEILPRLL 394

Query: 189 --QAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGD 231
             Q  EG   K V+ GA H+A + EDG+L  WGW +YG LGLGD NDR +P +V  +DG 
Sbjct: 395 DGQNLEGKHAKAVSCGARHSAVLAEDGQLLCWGWNKYGQLGLGDTNDRNIPTQV-QLDGC 454

[Close]

BLAST of Cucsat.G6760 vs. TAIR 10
Match: AT5G19420.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain )

HSP 1 Score: 159.1 bits (401), Expect = 5.3e-39
Identity = 92/265 (34.72%), Postives = 138/265 (52.08%), Query Frame = 0


Query: 13  ISAGASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTCGADHT 72
           I+ G  H+V +       SWG   +G+LGHG   +   P  + AL+   I  V CG  H+
Sbjct: 317 IACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHS 376

Query: 73  TAYSVARTEVYSWGWGDFGRLGHGNSSDLFTPKPIKAL-HGLKIRQIACGDSHCLAVTME 132
            A +++  ++Y+WG GDFG LGHGN    + PK +  L  G+ +  IACG  H   VT  
Sbjct: 377 CAVTLS-GDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSA 436

Query: 133 GEVQSWGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTE--------- 192
           G++ ++G    G LG G  +   +P+++ + +G+     A G  HTAAV E         
Sbjct: 437 GQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSS 496

Query: 193 ---DGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLY 252
               G+LF WG G    LG GD+  +LVP  V+++       VACG   T+++++ G +Y
Sbjct: 497 NCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVY 556

Query: 253 TYGWSKYGQLGHGDFEDRLVPHRLE 265
           T G   YGQLG+    D  VP R++
Sbjct: 557 TMGSPVYGQLGN-PHADGKVPTRVD 579

The following BLAST results are available for this feature:

BLAST of Cucsat.G6760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FN03	5.2e-140	84.17	Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1	[more]
Q5GLZ8	7.2e-49	38.81	Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens OX=9606 GN=HERC4 PE=1...	[more]
Q5PQN1	7.2e-49	38.81	Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus OX=10116 GN=Herc...	[more]
Q6PAV2	9.4e-49	38.81	Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus OX=10090 GN=Herc4 PE=...	[more]
Q15034	6.1e-48	38.43	Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens OX=9606 GN=HERC3 PE=1...	[more]

BLAST of Cucsat.G6760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653892.1	7.22e-202	98.57	ultraviolet-B receptor UVR8 [Cucumis sativus] >XP_031740152.1 ultraviolet-B rece...	[more]
XP_008442146.1	1.98e-198	97.13	PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Cucumis melo]	[more]
XP_038882652.1	1.14e-197	96.06	ultraviolet-B receptor UVR8 isoform X2 [Benincasa hispida] >XP_038882653.1 ultra...	[more]
KAA0041325.1	1.79e-195	96.42	ultraviolet-B receptor UVR8 isoform X1 [Cucumis melo var. makuwa]	[more]
KAG6595606.1	1.15e-194	94.27	Ultraviolet-B receptor UVR8, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cucsat.G6760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2E7	3.49e-202	98.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G496230 PE=4 SV=1	[more]
A0A1S3B513	9.60e-199	97.13	ultraviolet-B receptor UVR8 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103486094 P...	[more]
A0A5A7TIS4	8.68e-196	96.42	Ultraviolet-B receptor UVR8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1HRA4	1.78e-193	93.91	ultraviolet-B receptor UVR8 OS=Cucurbita maxima OX=3661 GN=LOC111466009 PE=4 SV=...	[more]
A0A6J1EER4	2.52e-193	93.91	ultraviolet-B receptor UVR8 OS=Cucurbita moschata OX=3662 GN=LOC111432565 PE=4 S...	[more]

BLAST of Cucsat.G6760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63860.1	3.7e-141	84.17	Regulator of chromosome condensation (RCC1) family protein	[more]
AT1G69710.1	1.3e-40	35.53	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain	[more]
AT5G12350.1	1.1e-39	34.72	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain	[more]
AT3G53830.1	5.3e-39	33.60	Regulator of chromosome condensation (RCC1) family protein	[more]
AT5G19420.1	5.3e-39	34.72	Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000408	Regulator of chromosome condensation, RCC1	PRINTS	PR00633	RCCNDNSATION	coord: 10..23 score: 39.29 coord: 118..134 score: 36.27 coord: 29..45 score: 33.33
IPR000408	Regulator of chromosome condensation, RCC1	PFAM	PF00415	RCC1	coord: 81..128 e-value: 6.7E-15 score: 55.4 coord: 29..74 e-value: 2.8E-15 score: 56.6
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS00626	RCC1_2	coord: 13..23
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 27..78 score: 14.946199
IPR000408	Regulator of chromosome condensation, RCC1	PROSITE	PS50012	RCC1_3	coord: 80..131 score: 15.589399
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	GENE3D	2.130.10.30		coord: 2..161 e-value: 3.6E-44 score: 153.1
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	SUPERFAMILY	50985	RCC1/BLIP-II	coord: 8..148
IPR032996	Ultraviolet-B receptor UVR8	PANTHER	PTHR22870:SF412	BNAA09G52370D PROTEIN	coord: 6..136
None	No IPR available	PANTHER	PTHR22870	REGULATOR OF CHROMOSOME CONDENSATION	coord: 6..136

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G6760.T1	Cucsat.G6760.T1	mRNA
Cucsat.G6760.T2	Cucsat.G6760.T2	mRNA
Cucsat.G6760.T8	Cucsat.G6760.T8	mRNA
Cucsat.G6760.T3	Cucsat.G6760.T3	mRNA
Cucsat.G6760.T14	Cucsat.G6760.T14	mRNA
Cucsat.G6760.T4	Cucsat.G6760.T4	mRNA
Cucsat.G6760.T5	Cucsat.G6760.T5	mRNA
Cucsat.G6760.T6	Cucsat.G6760.T6	mRNA
Cucsat.G6760.T7	Cucsat.G6760.T7	mRNA
Cucsat.G6760.T16	Cucsat.G6760.T16	mRNA
Cucsat.G6760.T15	Cucsat.G6760.T15	mRNA
Cucsat.G6760.T12	Cucsat.G6760.T12	mRNA
Cucsat.G6760.T10	Cucsat.G6760.T10	mRNA
Cucsat.G6760.T11	Cucsat.G6760.T11	mRNA
Cucsat.G6760.T13	Cucsat.G6760.T13	mRNA
Cucsat.G6760.T9	Cucsat.G6760.T9	mRNA
Cucsat.G6760.T17	Cucsat.G6760.T17	mRNA
Cucsat.G6760.T18	Cucsat.G6760.T18	mRNA
Cucsat.G6760.T19	Cucsat.G6760.T19	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009649	entrainment of circadian clock
biological_process	GO:0010224	response to UV-B
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0009881	photoreceptor activity
molecular_function	GO:0042803	protein homodimerization activity