Cucsat.G6529 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G6529
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	rho GDP-dissociation inhibitor 1-like
Location	ctg1450: 104874 .. 107625 (+)
RNA-Seq Expression	Cucsat.G6529
Synteny	Cucsat.G6529

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGGCCCCCTAGAATCTTGGCATTCGTGGCCTAACCGTACTGACCAAGTGATCTTCACCATCTCTTTTTTATTCTCTCTTTCAACATGAAATTTCGGATCACCACATGACTCTTTCCCTTTCTCCCCTTTTCAACTTTTTCTAACTGCCTTCCCCTAATTCCCTTTCCTCCCCTTCTTCTTTTTCTTCTCACGAGGGTTAATTCTCCTCGTGGGCTTCTTCTTCGTCTTCTTCTTCTTTCTTTCTTTTTCTTTTTTCTTTTACACCTTTCTCAAATTTCTCTTTCTGTTTCTCTCATTCTCCTCTTTTATCTTTCATTTGGGTTTTTGGGGGACTTCTTCTTCTTCTTTACCTTTTTTCCTCAATTGGGTCACTTGTGGGTGTGTTTTTATCTGTGCCATTGTGGTACGATTTTTGGGTTTTGATGGCTTGTTGATGTCTGTGGCCGTTGAAATCGGTTCGAGTTCAAAAGGGATAATAATGGGGTTTGATGAGAAAGACAAAGATGGGAAACAAGAGGATTCTTCTCCCAAATTGTTAGAGCGCAAGAAAGGTGAGGATGAAGAACAGGAAGTTGATGTTGTGCCTTCTTCTGGTATGACTAGGAAAATGAGTGAAAGCTCAATCTGTGCAACTGAAGAAGAAGACGATGAAGATGGAAGGAAAATCGAATTGGGTCCTCAATACACTTTGAAAGAACTTAACGAAAAGGATAAGGTCTTCTTTCTCTAATTTTCCATATTTGTGAACAATTAACATTTTAACTTTGTGTTTCTTCAATTGATTCTGAGCTTTCACATTTTTAGGATGATGAAAGTCTTAGGAGGTGGAAAGAACAGCTTCTGGGTGATGTTGATTTTGAATCTGTTGGAGGTAATTCAAAATTTAAAGCCCTAAATATGAACCCCTTTGAATTTGTTCTTAATTTATTTATTTTTCTCTTGTTGGTTGGTTGGTGTATTAGAAACTCTTGAGCCAGATGTAAAGATTTTAAGCCTAGCAATAAAATCATCAGGGCGACCTGACATTGTTCTTCCAGTTCCTGAAAGTGGAAATCCTAAAGGCCTTTGGTTTACTTTGAAGGAAGGTAGTCGTTACAGCCTTAAGTTTACTTTTCAGGTTAGCAACAACATTGTTTCTGGTCTCAAATATACCAATACAGTCTGGAAAACTGGAGTCAAAGGTAAATTACAAAAACAAAAAAATAACACATCACAAATCTTTCTCTCTATATGTTGTACACTCTGTTTTTGTATCTCTGCCATTAATTGAGAAATGTTGTTTTTGTTTTTTGTGTTTTGTATTTTTTTTTTTTTTTTTATATCCACAGTTGATAGTACAAAAGAGATGATTGGAACTTTCAGCCCTCAACCTGAACCTTATGATCATGAGATGCAGGAAGAAACAACTCCTTCTGGCATCTTTGCCAGAGGATCATATTCAGCCAGAAGCAAGGTCAGTTTTAGGATTTTCCAATAAGGATGGGCTAACATTAATCTCACCTGTTCCCGGACATGAAAATGAGTTAATCCATTTTGACCAACTACCCATTTAGGAGTTTACCCAAATACAATGCTTCAGGTATAAACTTCTTTTTGGAATTTGAAATTTAATTCAATCATTATACTAAAAAAAATACAAATTATTGTAAAAAATGATTACCAAGTAGAACTTAGTTTTAAAACTTCTTATGACAGTAGATTAGAAATTAAATTTGTAGATAAACTATAAAAGCTGAGTGTGATATTAAAGTTTGAAGGATAAATTTTGTGGGTAAATAAACAAAAATAATATGATAGAGAGTATACAAGAAAATAAATCTTTTACCCATGTACCTTATCTGACAATTTAAAAACAGACAGGGATATTAAAATTTGAATTTGAATGCTATTCTATGAATTTCTCTGCTCTATTATTTTTCTTTCTGTAAACCAATTAAAGAGTATCTATTTCAACTGTACCTGTCCATTTATGACTTGCATCACATGGCTTGACTGGCTTTTATCTCTCAGCTTTCACCTTTAAGATAAAGCAGCAATTTATTATTATTGTTGTTGTTGTTATTGTTATTATTATCATCACCATGGCTATCTATGCATTTGCATATGCTTATGCAATAAGTAACATGAAATTTCCTTATCTTTTCAGTCTTGTTTTAAAAGACATCGTTTTGTTTTGCGTCGTCTTCACATGAATATATGTCTGCATTCTTGTCTGCTTGTTTATTGGGTTTTCTTTATTACATTTTTGGCACAGTTTGTTGATGATGATAACAAATGCTACTTGGAAATCAATTACACATTTGATATAAGGAAAGATTGGAAGGAGGAGCAGCCTGCTTAATCATACCCCTTGAATATTTCGGATCGTTCGGTGCTTGATTCAGCCCGAATCCGCTGCTCTACTCGGGTTTCTTAAGATGTTTAATTTTGCTGCTTTCTTATTTATAATTCTTGATCTTCTCAAAGTTGATGTTTTTTCTTCTTCTTTTTTGACAACGAGGATGATGAAGGATGTTTTTTGAACTAACAATAGAAAAAAAAGAAAAACAGAGATGAGTTAGATCTGTACTGTCAATAAAAAAGCTCAGCTTTGGTTTTTTGCTAAATGTGAAAAGGCAATCTTCTTTCCCCTCTTATTATTGTTATTGCTTCATCAATTTCTTCTTTTCTGTTTTTGGTAATATTATGTTTCTAATTTGGAAAAAATAATCCCAATAGATGCTGGAAATAAGTAATGAAGTGTTGTTAATC

Coding sequence (CDS)

ATGTCTGTGGCCGTTGAAATCGGTTCGAGTTCAAAAGGGATAATAATGGGGTTTGATGAGAAAGACAAAGATGGGAAACAAGAGGATTCTTCTCCCAAATTGTTAGAGCGCAAGAAAGGTGAGGATGAAGAACAGGAAGTTGATGTTGTGCCTTCTTCTGGTATGACTAGGAAAATGAGTGAAAGCTCAATCTGTGCAACTGAAGAAGAAGACGATGAAGATGGAAGGAAAATCGAATTGGGTCCTCAATACACTTTGAAAGAACTTAACGAAAAGGATAAGGATGATGAAAGTCTTAGGAGGTGGAAAGAACAGCTTCTGGGTGATGTTGATTTTGAATCTGTTGGAGAAACTCTTGAGCCAGATGTAAAGATTTTAAGCCTAGCAATAAAATCATCAGGGCGACCTGACATTGTTCTTCCAGTTCCTGAAAGTGGAAATCCTAAAGGCCTTTGGTTTACTTTGAAGGAAGGTAGTCGTTACAGCCTTAAGTTTACTTTTCAGGTTAGCAACAACATTGTTTCTGGTCTCAAATATACCAATACAGTCTGGAAAACTGGAGTCAAAGGTAAATTACAAAAACAAAAAAATAACACATCACAAATCTTTCTCTCTATATGTTGTACACTCTGTTTTTGTATCTCTGCCATTAATTGA

Protein sequence

MSVAVEIGSSSKGIIMGFDEKDKDGKQEDSSPKLLERKKGEDEEQEVDVVPSSGMTRKMSESSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFESVGETLEPDVKILSLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYTNTVWKTGVKGKLQKQKNNTSQIFLSICCTLCFCISAIN

Homology

[Close]

BLAST of Cucsat.G6529 vs. ExPASy Swiss-Prot
Match: Q9SFC6 (Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=GDI1 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.0e-54
Identity = 116/189 (61.38%), Postives = 144/189 (76.19%), Query Frame = 0


Query: 16  MGFDE-----KDKDGKQEDSSPKLLERKKGEDEEQEVDVVPSSGMTRKMSESSICATEEE 75
           MGFD+      +KDG  E+SS     R + +D+           ++R+MSESS+CATEEE
Sbjct: 10  MGFDDNNNNKNNKDGDDENSS----SRTRADDD----------ALSRQMSESSLCATEEE 69

Query: 76  DDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFESVGETLEPDVKILSLAI 135
           +D+D  K++LGPQYT+KE  EKDKDDESLR+WKEQLLG VD  ++GETL+P+V+I SLAI
Sbjct: 70  EDDDS-KLQLGPQYTIKEHLEKDKDDESLRKWKEQLLGSVDVTNIGETLDPEVRIDSLAI 129

Query: 136 KSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYTNTVWKTGVKG 195
            S GRPDIVL VPE+GNPKG+WFTLKEGS+Y+LKFTF V+NNIVSGL+YTNTVWKTGVK 
Sbjct: 130 ISPGRPDIVLLVPENGNPKGMWFTLKEGSKYNLKFTFHVNNNIVSGLRYTNTVWKTGVKV 183

Query: 196 KLQKQKNNT 200
              K+   T
Sbjct: 190 DRAKEMLGT 183

[Close]

BLAST of Cucsat.G6529 vs. ExPASy Swiss-Prot
Match: Q9TU03 (Rho GDP-dissociation inhibitor 2 OS=Bos taurus OX=9913 GN=ARHGDIB PE=2 SV=3)

HSP 1 Score: 79.7 bits (195), Expect = 4.5e-14
Identity = 57/140 (40.71%), Postives = 80/140 (57.14%), Query Frame = 0


Query: 55  MTRKMSESSICATEEEDDE-DGR-KIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDF 114
           MT K  E  +   EE+DDE DG+   +  PQ +LKEL E DKDDESL ++K+ LLGD   
Sbjct: 1   MTEKAPEPHV---EEDDDELDGKLNYKPPPQKSLKELQEMDKDDESLTKYKKTLLGDGPV 60

Query: 115 ESVGETLEPDVKILSLAIKSSGRPDIVLPVPESGNPKGL---WFTLKEGSRYSLKFTFQV 174
             V +   P+V +  L +     P   + +  +G+ + L    F LKEG  Y +K  F+V
Sbjct: 61  --VADPTAPNVTVTRLTLVCESAPG-PITMDLTGDLEALKKETFVLKEGVEYRVKINFKV 120

Query: 175 SNNIVSGLKYTNTVWKTGVK 190
           + +IVSGLKY    ++TGVK
Sbjct: 121 NKDIVSGLKYVQHTYRTGVK 134

[Close]

BLAST of Cucsat.G6529 vs. ExPASy Swiss-Prot
Match: Q61599 (Rho GDP-dissociation inhibitor 2 OS=Mus musculus OX=10090 GN=Arhgdib PE=1 SV=3)

HSP 1 Score: 76.6 bits (187), Expect = 3.8e-13
Identity = 53/140 (37.86%), Postives = 80/140 (57.14%), Query Frame = 0


Query: 55  MTRKMSESSICATEEEDDEDGRKIEL--GPQYTLKELNEKDKDDESLRRWKEQLLGDVDF 114
           MT K ++  +   EE DD+   K+     PQ +LKEL E DKDDESL ++K+ LLGDV  
Sbjct: 1   MTEKDAQPQL---EEADDDLDSKLNYKPPPQKSLKELQEMDKDDESLTKYKKTLLGDVPV 60

Query: 115 ESVGETLEPDVKILSLAIKSSGRPDIVLPVPESGNPKGL---WFTLKEGSRYSLKFTFQV 174
             V +   P+V +  L++     P   + +  +G+ + L    F LKEG  Y +K  F+V
Sbjct: 61  --VADPTVPNVTVTRLSLVCDSAPG-PITMDLTGDLEALKKDTFVLKEGIEYRVKINFKV 120

Query: 175 SNNIVSGLKYTNTVWKTGVK 190
           + +IVSGLKY    ++TG++
Sbjct: 121 NKDIVSGLKYVQHTYRTGMR 134

[Close]

BLAST of Cucsat.G6529 vs. ExPASy Swiss-Prot
Match: P52566 (Rho GDP-dissociation inhibitor 2 OS=Homo sapiens OX=9606 GN=ARHGDIB PE=1 SV=3)

HSP 1 Score: 76.3 bits (186), Expect = 4.9e-13
Identity = 56/142 (39.44%), Postives = 78/142 (54.93%), Query Frame = 0


Query: 55  MTRKMSESSICATEEEDDEDGRKIELG----PQYTLKELNEKDKDDESLRRWKEQLLGDV 114
           MT K  E  +    EEDD+D    +L     PQ +LKEL E DKDDESL ++K+ LLGD 
Sbjct: 1   MTEKAPEPHV----EEDDDDELDSKLNYKPPPQKSLKELQEMDKDDESLIKYKKTLLGDG 60

Query: 115 DFESVGETLEPDVKILSLAIKSSGRPDIVLPVPESGNPKGL---WFTLKEGSRYSLKFTF 174
               V +   P+V +  L +     P   + +  +G+ + L      LKEGS Y +K  F
Sbjct: 61  PV--VTDPKAPNVVVTRLTLVCESAPG-PITMDLTGDLEALKKETIVLKEGSEYRVKIHF 120

Query: 175 QVSNNIVSGLKYTNTVWKTGVK 190
           +V+ +IVSGLKY    ++TGVK
Sbjct: 121 KVNRDIVSGLKYVQHTYRTGVK 135

[Close]

BLAST of Cucsat.G6529 vs. ExPASy Swiss-Prot
Match: P52565 (Rho GDP-dissociation inhibitor 1 OS=Homo sapiens OX=9606 GN=ARHGDIA PE=1 SV=3)

HSP 1 Score: 70.9 bits (172), Expect = 2.1e-11
Identity = 48/127 (37.80%), Postives = 71/127 (55.91%), Query Frame = 0


Query: 66  ATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFESVGETLEPDVKI 125
           A E E+DE     +   Q +++E+ E DKDDESLR++KE LLG V   +  +   P+V +
Sbjct: 15  AAENEEDEHSVNYKPPAQKSIQEIQELDKDDESLRKYKEALLGRVAVSA--DPNVPNVVV 74

Query: 126 LSLAIKSSGRPDIVLPVPESGNP---KGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYTNT 185
             L +  S  P   L +  +G+    K   F LKEG  Y +K +F+V+  IVSG+KY   
Sbjct: 75  TGLTLVCSSAPG-PLELDLTGDLESFKKQSFVLKEGVEYRIKISFRVNREIVSGMKYIQH 134

Query: 186 VWKTGVK 190
            ++ GVK
Sbjct: 135 TYRKGVK 138

[Close]

BLAST of Cucsat.G6529 vs. NCBI nr
Match: KAE8652873.1 (hypothetical protein Csa_013012 [Cucumis sativus])

HSP 1 Score: 363 bits (933), Expect = 3.12e-125
Identity = 191/199 (95.98%), Postives = 192/199 (96.48%), Query Frame = 0


Query: 1   MSVAVEIGSSSKGIIMGFDEKDKDGKQEDSSPKLLERKKGEDEEQEVDVVPSSGMTRKMS 60
           MSVAVEIGSSSKGIIMGFDEKDKDGKQEDSSPKLLERKKGEDEEQEVDVVPSSGMTRKMS
Sbjct: 1   MSVAVEIGSSSKGIIMGFDEKDKDGKQEDSSPKLLERKKGEDEEQEVDVVPSSGMTRKMS 60

Query: 61  ESSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFESVGETLE 120
           ESSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFESVGETLE
Sbjct: 61  ESSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFESVGETLE 120

Query: 121 PDVKILSLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYT 180
           PDVKILSLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYT
Sbjct: 121 PDVKILSLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYT 180

Query: 181 NTVWKTGVKGKLQKQKNNT 199
           NTVWKTGVK    K+   T
Sbjct: 181 NTVWKTGVKVDSTKEMIGT 199

[Close]

BLAST of Cucsat.G6529 vs. NCBI nr
Match: XP_004139545.1 (rho GDP-dissociation inhibitor 1 [Cucumis sativus])

HSP 1 Score: 363 bits (933), Expect = 6.53e-125
Identity = 191/199 (95.98%), Postives = 192/199 (96.48%), Query Frame = 0


Query: 1   MSVAVEIGSSSKGIIMGFDEKDKDGKQEDSSPKLLERKKGEDEEQEVDVVPSSGMTRKMS 60
           MSVAVEIGSSSKGIIMGFDEKDKDGKQEDSSPKLLERKKGEDEEQEVDVVPSSGMTRKMS
Sbjct: 1   MSVAVEIGSSSKGIIMGFDEKDKDGKQEDSSPKLLERKKGEDEEQEVDVVPSSGMTRKMS 60

Query: 61  ESSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFESVGETLE 120
           ESSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFESVGETLE
Sbjct: 61  ESSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFESVGETLE 120

Query: 121 PDVKILSLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYT 180
           PDVKILSLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYT
Sbjct: 121 PDVKILSLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYT 180

Query: 181 NTVWKTGVKGKLQKQKNNT 199
           NTVWKTGVK    K+   T
Sbjct: 181 NTVWKTGVKVDSTKEMIGT 199

[Close]

BLAST of Cucsat.G6529 vs. NCBI nr
Match: XP_038893727.1 (rho GDP-dissociation inhibitor 1-like [Benincasa hispida])

HSP 1 Score: 328 bits (840), Expect = 8.42e-111
Identity = 175/199 (87.94%), Postives = 184/199 (92.46%), Query Frame = 0


Query: 1   MSVAVEIGSSSKGIIMGFDEKDKDGKQEDSSPKLLERKKGEDEEQEVDVVPSSGMTRKMS 60
           MSVAVEIGSSSKGI MGFD+KDKDGK+EDSSPK+ E KK EDE+Q+VD VP  G++RKMS
Sbjct: 1   MSVAVEIGSSSKGI-MGFDDKDKDGKEEDSSPKMSEPKKAEDEDQDVDSVP--GLSRKMS 60

Query: 61  ESSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFESVGETLE 120
           ESSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLG VDFE+VGETLE
Sbjct: 61  ESSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGGVDFEAVGETLE 120

Query: 121 PDVKILSLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYT 180
           PDVKILSLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYT
Sbjct: 121 PDVKILSLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYT 180

Query: 181 NTVWKTGVKGKLQKQKNNT 199
           NTVWKTGVK    K+   T
Sbjct: 181 NTVWKTGVKVDSTKEMIGT 196

[Close]

BLAST of Cucsat.G6529 vs. NCBI nr
Match: XP_008458949.1 (PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis melo] >KAA0054334.1 rho GDP-dissociation inhibitor 1-like [Cucumis melo var. makuwa] >TYK12371.1 rho GDP-dissociation inhibitor 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 320 bits (821), Expect = 4.04e-108
Identity = 169/184 (91.85%), Postives = 172/184 (93.48%), Query Frame = 0


Query: 16  MGFDEKDKDGKQEDSSPKLLERKKGEDEEQEVDVVPSSGMTRKMSESSICATEEEDDEDG 75
           MGFDEKDKDGKQED+SP LLE KKGEDEEQEV  VPSSGM+RKMSESSICATEEEDDEDG
Sbjct: 1   MGFDEKDKDGKQEDASPNLLEHKKGEDEEQEV--VPSSGMSRKMSESSICATEEEDDEDG 60

Query: 76  RKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFESVGETLEPDVKILSLAIKSSGR 135
           RKIELGPQYTLKELNEKDKDDESLRRWKEQLLG VDFESVGETLEPDVKILSLAIKSSGR
Sbjct: 61  RKIELGPQYTLKELNEKDKDDESLRRWKEQLLGGVDFESVGETLEPDVKILSLAIKSSGR 120

Query: 136 PDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYTNTVWKTGVKGKLQKQ 195
           PDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYTNTVWKTGVK    K+
Sbjct: 121 PDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYTNTVWKTGVKVDSTKE 180

Query: 196 KNNT 199
              T
Sbjct: 181 MIGT 182

[Close]

BLAST of Cucsat.G6529 vs. NCBI nr
Match: XP_022142383.1 (rho GDP-dissociation inhibitor 1-like [Momordica charantia])

HSP 1 Score: 301 bits (772), Expect = 1.86e-100
Identity = 167/200 (83.50%), Postives = 177/200 (88.50%), Query Frame = 0


Query: 1   MSVAVEIGSSSKGIIMGFDEKDKDGKQEDSSPK-LLERKKGEDEEQEVDVVPSSGMTRKM 60
           MS+ VE GSSSKGI MGFDEKDKDGK ED+SPK + + KK EDEE   D    +GM+RKM
Sbjct: 1   MSLDVEAGSSSKGI-MGFDEKDKDGK-EDASPKDVSQPKKAEDEE---DPDAPAGMSRKM 60

Query: 61  SESSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFESVGETL 120
           SE+SICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLG VDFE+VGETL
Sbjct: 61  SENSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGTVDFEAVGETL 120

Query: 121 EPDVKILSLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKY 180
           EPDVKI+SLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKY
Sbjct: 121 EPDVKIVSLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKY 180

Query: 181 TNTVWKTGVKGKLQKQKNNT 199
           TNTVWKTGVK    K+   T
Sbjct: 181 TNTVWKTGVKVDSTKEMIGT 195

[Close]

BLAST of Cucsat.G6529 vs. ExPASy TrEMBL
Match: A0A0A0LYM9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G186660 PE=3 SV=1)

HSP 1 Score: 339 bits (869), Expect = 1.28e-115
Identity = 182/199 (91.46%), Postives = 183/199 (91.96%), Query Frame = 0


Query: 1   MSVAVEIGSSSKGIIMGFDEKDKDGKQEDSSPKLLERKKGEDEEQEVDVVPSSGMTRKMS 60
           MSVAVEIGSSSKGIIMGFDEKDKDGKQEDSSPKLLERKKGEDEEQEVDVVPSSGMTRKMS
Sbjct: 1   MSVAVEIGSSSKGIIMGFDEKDKDGKQEDSSPKLLERKKGEDEEQEVDVVPSSGMTRKMS 60

Query: 61  ESSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFESVGETLE 120
           ESSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLL         ETLE
Sbjct: 61  ESSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLL---------ETLE 120

Query: 121 PDVKILSLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYT 180
           PDVKILSLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYT
Sbjct: 121 PDVKILSLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYT 180

Query: 181 NTVWKTGVKGKLQKQKNNT 199
           NTVWKTGVK    K+   T
Sbjct: 181 NTVWKTGVKVDSTKEMIGT 190

[Close]

BLAST of Cucsat.G6529 vs. ExPASy TrEMBL
Match: A0A5A7UGQ5 (Rho GDP-dissociation inhibitor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001510 PE=3 SV=1)

HSP 1 Score: 320 bits (821), Expect = 1.96e-108
Identity = 169/184 (91.85%), Postives = 172/184 (93.48%), Query Frame = 0


Query: 16  MGFDEKDKDGKQEDSSPKLLERKKGEDEEQEVDVVPSSGMTRKMSESSICATEEEDDEDG 75
           MGFDEKDKDGKQED+SP LLE KKGEDEEQEV  VPSSGM+RKMSESSICATEEEDDEDG
Sbjct: 1   MGFDEKDKDGKQEDASPNLLEHKKGEDEEQEV--VPSSGMSRKMSESSICATEEEDDEDG 60

Query: 76  RKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFESVGETLEPDVKILSLAIKSSGR 135
           RKIELGPQYTLKELNEKDKDDESLRRWKEQLLG VDFESVGETLEPDVKILSLAIKSSGR
Sbjct: 61  RKIELGPQYTLKELNEKDKDDESLRRWKEQLLGGVDFESVGETLEPDVKILSLAIKSSGR 120

Query: 136 PDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYTNTVWKTGVKGKLQKQ 195
           PDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYTNTVWKTGVK    K+
Sbjct: 121 PDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYTNTVWKTGVKVDSTKE 180

Query: 196 KNNT 199
              T
Sbjct: 181 MIGT 182

[Close]

BLAST of Cucsat.G6529 vs. ExPASy TrEMBL
Match: A0A1S3CA99 (rho GDP-dissociation inhibitor 1-like OS=Cucumis melo OX=3656 GN=LOC103498208 PE=3 SV=1)

HSP 1 Score: 320 bits (821), Expect = 1.96e-108
Identity = 169/184 (91.85%), Postives = 172/184 (93.48%), Query Frame = 0


Query: 16  MGFDEKDKDGKQEDSSPKLLERKKGEDEEQEVDVVPSSGMTRKMSESSICATEEEDDEDG 75
           MGFDEKDKDGKQED+SP LLE KKGEDEEQEV  VPSSGM+RKMSESSICATEEEDDEDG
Sbjct: 1   MGFDEKDKDGKQEDASPNLLEHKKGEDEEQEV--VPSSGMSRKMSESSICATEEEDDEDG 60

Query: 76  RKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFESVGETLEPDVKILSLAIKSSGR 135
           RKIELGPQYTLKELNEKDKDDESLRRWKEQLLG VDFESVGETLEPDVKILSLAIKSSGR
Sbjct: 61  RKIELGPQYTLKELNEKDKDDESLRRWKEQLLGGVDFESVGETLEPDVKILSLAIKSSGR 120

Query: 136 PDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYTNTVWKTGVKGKLQKQ 195
           PDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYTNTVWKTGVK    K+
Sbjct: 121 PDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYTNTVWKTGVKVDSTKE 180

Query: 196 KNNT 199
              T
Sbjct: 181 MIGT 182

[Close]

BLAST of Cucsat.G6529 vs. ExPASy TrEMBL
Match: A0A6J1CN50 (rho GDP-dissociation inhibitor 1-like OS=Momordica charantia OX=3673 GN=LOC111012529 PE=3 SV=1)

HSP 1 Score: 301 bits (772), Expect = 8.98e-101
Identity = 167/200 (83.50%), Postives = 177/200 (88.50%), Query Frame = 0


Query: 1   MSVAVEIGSSSKGIIMGFDEKDKDGKQEDSSPK-LLERKKGEDEEQEVDVVPSSGMTRKM 60
           MS+ VE GSSSKGI MGFDEKDKDGK ED+SPK + + KK EDEE   D    +GM+RKM
Sbjct: 1   MSLDVEAGSSSKGI-MGFDEKDKDGK-EDASPKDVSQPKKAEDEE---DPDAPAGMSRKM 60

Query: 61  SESSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFESVGETL 120
           SE+SICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLG VDFE+VGETL
Sbjct: 61  SENSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGTVDFEAVGETL 120

Query: 121 EPDVKILSLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKY 180
           EPDVKI+SLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKY
Sbjct: 121 EPDVKIVSLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKY 180

Query: 181 TNTVWKTGVKGKLQKQKNNT 199
           TNTVWKTGVK    K+   T
Sbjct: 181 TNTVWKTGVKVDSTKEMIGT 195

[Close]

BLAST of Cucsat.G6529 vs. ExPASy TrEMBL
Match: A0A6J1KJ29 (rho GDP-dissociation inhibitor 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495676 PE=3 SV=1)

HSP 1 Score: 294 bits (753), Expect = 5.30e-98
Identity = 162/199 (81.41%), Postives = 171/199 (85.93%), Query Frame = 0


Query: 1   MSVAVEIGSSSKGIIMGFDEKDKDGKQEDSSPKLLERKKGEDEEQEVDVVPSSGMTRKMS 60
           MS+AVE+GSSSKGI MG D+       ED SP++ E KK ED E   DV  +SG++RKMS
Sbjct: 1   MSLAVEVGSSSKGI-MGLDK-------EDDSPEVSEPKKAEDGE---DVDATSGLSRKMS 60

Query: 61  ESSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFESVGETLE 120
           ESSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLG VDFESVGETLE
Sbjct: 61  ESSICATEEEDDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGGVDFESVGETLE 120

Query: 121 PDVKILSLAIKSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYT 180
           PDVKILSLAIKSSGRPDIVLPVPE GNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYT
Sbjct: 121 PDVKILSLAIKSSGRPDIVLPVPECGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYT 180

Query: 181 NTVWKTGVKGKLQKQKNNT 199
           NTVWKTGVK    K+   T
Sbjct: 181 NTVWKTGVKVDSTKEMIGT 188

[Close]

BLAST of Cucsat.G6529 vs. TAIR 10
Match: AT3G07880.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 213.8 bits (543), Expect = 1.4e-55
Identity = 116/189 (61.38%), Postives = 144/189 (76.19%), Query Frame = 0


Query: 16  MGFDE-----KDKDGKQEDSSPKLLERKKGEDEEQEVDVVPSSGMTRKMSESSICATEEE 75
           MGFD+      +KDG  E+SS     R + +D+           ++R+MSESS+CATEEE
Sbjct: 10  MGFDDNNNNKNNKDGDDENSS----SRTRADDD----------ALSRQMSESSLCATEEE 69

Query: 76  DDEDGRKIELGPQYTLKELNEKDKDDESLRRWKEQLLGDVDFESVGETLEPDVKILSLAI 135
           +D+D  K++LGPQYT+KE  EKDKDDESLR+WKEQLLG VD  ++GETL+P+V+I SLAI
Sbjct: 70  EDDDS-KLQLGPQYTIKEHLEKDKDDESLRKWKEQLLGSVDVTNIGETLDPEVRIDSLAI 129

Query: 136 KSSGRPDIVLPVPESGNPKGLWFTLKEGSRYSLKFTFQVSNNIVSGLKYTNTVWKTGVKG 195
            S GRPDIVL VPE+GNPKG+WFTLKEGS+Y+LKFTF V+NNIVSGL+YTNTVWKTGVK 
Sbjct: 130 ISPGRPDIVLLVPENGNPKGMWFTLKEGSKYNLKFTFHVNNNIVSGLRYTNTVWKTGVKV 183

Query: 196 KLQKQKNNT 200
              K+   T
Sbjct: 190 DRAKEMLGT 183

[Close]

BLAST of Cucsat.G6529 vs. TAIR 10
Match: AT1G12070.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 184.9 bits (468), Expect = 7.0e-47
Identity = 97/166 (58.43%), Postives = 124/166 (74.70%), Query Frame = 0


Query: 36  ERKKGEDEEQEVDVVPSSGMTRKMSESSICATEEEDDEDGRKIELGPQYTLKELNEKDKD 95
           E K GE  E+        G++RK S SS+C T+++++E+ +K+ELGP   LKE  EKDKD
Sbjct: 7   EMKAGESSEEP----KGQGLSRKNSHSSMCPTDDDEEEEDKKLELGPMIALKEQLEKDKD 66

Query: 96  DESLRRWKEQLLGDVDFESVGETLEPDVKILSLAIKSSGRPDIVLPVPESGNP--KGLWF 155
           DESLRRWKEQLLG VD E VGET +P VKIL+L I+S  R D+VL +PE+G P  KG WF
Sbjct: 67  DESLRRWKEQLLGSVDLEEVGETPDPLVKILTLTIRSPDREDMVLTIPENGKPASKGPWF 126

Query: 156 TLKEGSRYSLKFTFQVSNNIVSGLKYTNTVWKTGVKGKLQKQKNNT 200
           TLKEGS+Y+L FTF+V+NNIVSGL+Y+NTVWKTG+K   +K+   T
Sbjct: 127 TLKEGSKYTLIFTFRVTNNIVSGLQYSNTVWKTGIKVYSRKEMLGT 168

[Close]

BLAST of Cucsat.G6529 vs. TAIR 10
Match: AT1G62450.1 (Immunoglobulin E-set superfamily protein )

HSP 1 Score: 174.9 bits (442), Expect = 7.2e-44
Identity = 92/156 (58.97%), Postives = 117/156 (75.00%), Query Frame = 0


Query: 36  ERKKGEDEEQEVDVVPSSGMTRKMSESSICATEEEDDEDGRKIELGPQYTLKELNEKDKD 95
           E KKGE   +  +     G++RK S SS+  TE++++++ +K+ELGP   LKE  E+DKD
Sbjct: 6   EMKKGEASGETSE---KMGLSRKNSGSSLSPTEDDEEDEDKKLELGPMIALKEQLERDKD 65

Query: 96  DESLRRWKEQLLGDVDFESVGETLEPDVKILSLAIKSSGRPDIVLPVPESG--NPKGLWF 155
           DESLRRWKEQLLG VD E VGET +P VKIL L I+S  R ++VL +PE G  NPKG WF
Sbjct: 66  DESLRRWKEQLLGVVDLEDVGETPDPVVKILDLTIRSPDREEMVLTIPEDGLPNPKGPWF 125

Query: 156 TLKEGSRYSLKFTFQVSNNIVSGLKYTNTVWKTGVK 190
           T+KEGS+Y+L F F+V+NNIVSGL+Y NTVWKTGVK
Sbjct: 126 TIKEGSKYTLVFNFRVTNNIVSGLRYNNTVWKTGVK 158

The following BLAST results are available for this feature:

BLAST of Cucsat.G6529 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SFC6	2.0e-54	61.38	Rho GDP-dissociation inhibitor 1 OS=Arabidopsis thaliana OX=3702 GN=GDI1 PE=1 SV...	[more]
Q9TU03	4.5e-14	40.71	Rho GDP-dissociation inhibitor 2 OS=Bos taurus OX=9913 GN=ARHGDIB PE=2 SV=3	[more]
Q61599	3.8e-13	37.86	Rho GDP-dissociation inhibitor 2 OS=Mus musculus OX=10090 GN=Arhgdib PE=1 SV=3	[more]
P52566	4.9e-13	39.44	Rho GDP-dissociation inhibitor 2 OS=Homo sapiens OX=9606 GN=ARHGDIB PE=1 SV=3	[more]
P52565	2.1e-11	37.80	Rho GDP-dissociation inhibitor 1 OS=Homo sapiens OX=9606 GN=ARHGDIA PE=1 SV=3	[more]

BLAST of Cucsat.G6529 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652873.1	3.12e-125	95.98	hypothetical protein Csa_013012 [Cucumis sativus]	[more]
XP_004139545.1	6.53e-125	95.98	rho GDP-dissociation inhibitor 1 [Cucumis sativus]	[more]
XP_038893727.1	8.42e-111	87.94	rho GDP-dissociation inhibitor 1-like [Benincasa hispida]	[more]
XP_008458949.1	4.04e-108	91.85	PREDICTED: rho GDP-dissociation inhibitor 1-like [Cucumis melo] >KAA0054334.1 rh...	[more]
XP_022142383.1	1.86e-100	83.50	rho GDP-dissociation inhibitor 1-like [Momordica charantia]	[more]

BLAST of Cucsat.G6529 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYM9	1.28e-115	91.46	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G186660 PE=3 SV=1	[more]
A0A5A7UGQ5	1.96e-108	91.85	Rho GDP-dissociation inhibitor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CA99	1.96e-108	91.85	rho GDP-dissociation inhibitor 1-like OS=Cucumis melo OX=3656 GN=LOC103498208 PE...	[more]
A0A6J1CN50	8.98e-101	83.50	rho GDP-dissociation inhibitor 1-like OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1KJ29	5.30e-98	81.41	rho GDP-dissociation inhibitor 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of Cucsat.G6529 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07880.1	1.4e-55	61.38	Immunoglobulin E-set superfamily protein	[more]
AT1G12070.1	7.0e-47	58.43	Immunoglobulin E-set superfamily protein	[more]
AT1G62450.1	7.2e-44	58.97	Immunoglobulin E-set superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000406	Rho protein GDP-dissociation inhibitor	PRINTS	PR00492	RHOGDI	coord: 173..189 score: 50.98 coord: 190..205 score: 38.54
IPR000406	Rho protein GDP-dissociation inhibitor	PFAM	PF02115	Rho_GDI	coord: 67..232 e-value: 4.0E-70 score: 235.6
IPR000406	Rho protein GDP-dissociation inhibitor	PANTHER	PTHR10980	RHO GDP-DISSOCIATION INHIBITOR	coord: 39..232
IPR024792	Rho GDP-dissociation inhibitor domain superfamily	GENE3D	2.70.50.30	Coagulation Factor XIII, subunit A, domain 1	coord: 76..234 e-value: 1.7E-57 score: 196.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..80
None	No IPR available	PANTHER	PTHR10980:SF50	RHO GDP-DISSOCIATION INHIBITOR 1	coord: 39..232
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 66..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G6529.T4	Cucsat.G6529.T4	mRNA
Cucsat.G6529.T7	Cucsat.G6529.T7	mRNA
Cucsat.G6529.T1	Cucsat.G6529.T1	mRNA
Cucsat.G6529.T3	Cucsat.G6529.T3	mRNA
Cucsat.G6529.T2	Cucsat.G6529.T2	mRNA
Cucsat.G6529.T6	Cucsat.G6529.T6	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050790	regulation of catalytic activity
biological_process	GO:0007266	Rho protein signal transduction
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005829	cytosol
cellular_component	GO:0016020	membrane
molecular_function	GO:0005094	Rho GDP-dissociation inhibitor activity