Cucsat.G645 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CATCGGTATTCCAACCTAACCGTAACTATTACCTAAGAATCTGCACCTTGGGCCGACCCGATTCAAGACCTTCCGTTTTGACACCGCTCAGCACCGCCGTATACAGCGACCGAAACCAAGCCCAATGGTCGAATAGTGTTGAATCCAAACCCAAACCCAAACCCAATACTTTTTCTTCTTTACCAAACCAAGTTGACGACGGACTCGGGGAATCTCCATTCTCAGAGATCTCAAGCTTCAAAGACAGTCTACAAATCCCCCACAAACAACCAAGCAACCACCTCTTCACGCTATGTTGCTACAAATTCTTTCAATATACAGGAACTTGCTTCTTCATGTTGCTCTGTCTCTCTCGCTTTCTGTTTTTATCATCTTCTTCAATATCCCATCCCTTTTCCTTCATGGCATATTCACTTACATCCACCCCGATAATACCAACAGCGGCGTCCGAGCCGCAATTAGACGACCTGACAGTTCTAGCTCCGGCACTGGACTAAAGGGGTACCGGAACTTGTCCTCAACTGCTGCCGCTGAGATCAAGAAAAGAACAAAGTCGAAGGACAAGGCTGAGTTTGATGAAAGCAAGGCGCAGATCTTCAGGTTAAAGCTGGATGAGAATCATCTGCAAACGCGGATCTATTTCAAAGAATACAGAGATGCTTTCACCTTTTCATTTGTGGGTATTTCTTGTTTAATGCTGCAAATTTTCGTGGGTGCATCAAAAAATTCTGGGGTTTGGGGAAATGGGATTTTTGTTCCTCTTCTGTTTGTGATCTTTGCTGGGTGTAAGCTATTTGTATCTCTCACAAAGGTTGCTTTTGAGAAATCTGCTTCCAGAACGTTGGATAGGCAATTAAGTTTACTCTTTGGAGTTTTTGGGTTTCTTTTTGGACTTCTAACTTGTTCTGCTTTTAGTCCTCTTATATTGGATTTTGATCTCCGTGAAATTGGTGGTATGGGGGCATGCTTTGTTGCTATCTTAATGGGGTTGTGTGCTGGGTTTTTGTTTATACCTGCAACCAAAATCACTCGATCATTTTGGCTTGGAACTGATCAAATTAGATGCAATTTGGATATGGTTTATTGTGGATGGTTTTCTAGGATAGTTTTGTATTCGAGTCAGGCAGCCATGGCTTTCACCACCTTGCTGTGGGTTAACCCATTAGCTGAAATTTTCATTAAGAAGAACATTGGCGAAGGTACAATTGGACATATGTCTAGTGAAATTCGAAATGCTGACAGATTGGTCGGAAGCATAGGATTCTCGAAGGAAGATTTTGCCAAACTTAGGCTTTGGTGTTTGACACTATCTGGTTTCTTGCAAATCATTGCAGTAAGGCAGAACTTGCAAATGTATCTGAACGAAGCTCTGTTATCTTGGTACCAAAGATTGCATGCTGGGAAAGTTCCTGACTTGGATTTCAGTAGAGCAAAGGTTTTTCTACATAATCACTACTTATGTGTGTCTGCTTTGCAGTTTTTTGCTCCACCAGCCTTAGTTTTGCTTTTTGTTGGGTTATCTCAAATTGATATCAACTCTTTCAAAAATACCAATTTGGTAAGTTTTCTTCTTCCCTGTTCTTCTTTTGTCAACCAAGTGGCTCTGTTAATGGCTTGGTGGATTGTCTCCGTACTGACTCTTTATACATCTGCCACCATTGTGCTATATCGTCGTGGTATCTTGTATGTTTCTTGACAATGTGAAATATGTGTTCTTTTTTTTTTTCTTTCGCTCTCTCGCTATTAAATTTTCCCGGAATTTTGTCCATTGAGTTTAGACTGCTGTAAGCTTTTGAGTGAAATGAGAACAATTTGGTTCAAGCCATGAAAATATCCATATATTGTGCTCTTGAACTTCATGAATCTTATTGTACAAACTAATGCCGATCGACGAATCAAATATGAGATGGTTTTTGTTGTTACGGTTTTGAATTTGCATTATGACTTCTCAGTGATGTCTTCTTCAATCTTTGCCAGTTCAGGTGTGTATTTCGTTTGAATGAAGCAACATATCATATGAATGTTATTGAATTGAATTGAGTTGTCTAAATACTTCATTCTTAGTTTTCTGTTCATTCTTAGTTTTCTGTTAATGAGATTGCTTATGAAATGTAATGTACAATGGGGGGATTCTCTTTAAGGCGTTGGATTAAAAAAATGTCTTAGAGATGAATAGCTCAGGCTAGAGGATTATCCTTTCCTTCTTCCTTTTTGTGGTGGGCGATGTCTGAAATTGATTTTGGATGAATTTTGAATGTAATTTTCTGATGGTACAATCCTTTTGTCTGAGGATGAACATAATATGTTTGATAACCTCAGTAGAGTGGTTTTGGGATGGCCTCAAGATTGAAAGTGAATCTGGAGAAAGATTCATTTGCAAGATTGAGCCGTGGAAAGAATATTTGTAAACTTGCAAGATTGGGGGTTGGGAGTGTTTTGAGAAAACTGGAGAAATGGAAAATTTTCAGCATTTCGAAGTGTTGATTGTCAACATTAGGTAATGAAATTCTTTTTCCAATTCATAATATGTTTCACCCTTCCTATTCCAATAAAGAAATTGAGAGTTCCATTTGGAATTGGCAATGGAGAAAAATCTCAGTGATGCAGTTGACTAGGAAATTGTGACTTTACCTTTAGAAAAAGTTGGCACTAGTGTTGGGAATTTGAAGAAAAAGAATGTGACTTTGCATACAATATGGCTTTAGCGGTTTCCTCTGCAGAAAGGAAAGTTTGAAATGTCTTAATTATCAAAAGTCTCGTCTCTAAACACTTTTTTATTAACCCTCTCCCCGGAGATAATGTCTTGTGTTAGGAAGATCAACTATGGGTACTGGGTACCCTCATCGTCGGTGTGTTTAGGGTTTAGGATTGATGTAAGTTATGTGGTTCACTAATAATATGCTTATGGGACAAAGGAAAAACAATTTTATTAGAAAAACTAATATAGATTGTATAACTAAGGCACCGCGAGATCGGATCCTTGCATGTGGTCGTTGGAAAGATATCTTAACAACAAAGGATTGAAAAGAGGTGTCTTGATATGTGTGTTTGGGTGGGTGGCTGAGATGGTCAGCATCGTTGAGTAGAACCAGGGAAGAGGAACTATATGTATCTTCATTGATGTTTTGATTGGAATTTTGGTTTTGGACATCAATTTCAAGTGTCCTGGTCAATGATGGTGTTGCCAAAGATTGCAGAAAATGAGCATATTTTGTGGGTGAATGTGATGGAAGCTTTTGACTTTGGTGAATATGGAGGAAGAGAAATTGAGGAACTTAATTGAGAAGTCTTCAATATGGACAAATATGTTTCATTGTTCCTCTTTCGCAGTCCTTTTCTTTGTTTCATATTCCCTTTTCTAATCATTTCTTTCTCGTGGATTCTTGCTTGATTTTATATTTTGTTAGATTTTGGTCATCTTTGGAAATGGGACTGAATTTCATCATGTTTATACTTTCACTTCAGGTTTTGCTTTATATTTTATTTCAAATTTCTAAAAAAAAAAAAAAGAACACTTTGAATTCTTCATTTTTATAAATTAAAAGAAAATGGATGAAATTCTGTGAAAATGATTTTTATACAATTAAAAAAACGCTTCGAATAACATTTAGTTCCGGGAAATTATTGAAAAGAGTATTCTCTATTTGAAATTTTATTTAACATTCTGTTTTATGAACTTATTTTTCATTTGTCTTATTGCAAAAAAATAAAAGTAAAAAAACTCATTATACTTGATTTTTTCTTTGACATCCACGTCATGTGTATTTGTACATTTTCCCATTTTTGACAATTGAATTTCTTTTTATATGAATGATGATTTAAATAAAGAAAAATTGTTTGACAAAGGCGAACCAACATTATTTTTAATGAAGTCGATATATAACCATTTTTGGGATTGGATTCAAGCAAATTAATTTTGAAAATAGAAAAAAGAAATAATCTATGTGGCTGCCTACGTGGAATGATTTGGATTTTGGGGTAAGCTCATAGAAGGGAGTGGTGGGTGACAGCTTAAAATAAGAAATAAAAGAAATAAAAGAAATAAAAGAAATAAAAGAAATAAAAGAATTAAAAGAATTAAAAGAATTAAAAGAATTAAAAGAATTAAAAGAAAAAGTTAGGCTTTCGAGGAAGTTTCTGAAATCAGCACTTTATCAACAAAAAAATCTTCTCTTCATCCTCTTCTTCCACGAACCTTCTAGAATTGAAATTCCCAACTCCCCTTCCCGGAAAATTCTCACAACTTTCCTTCCTTCCATAACTCACACTTCGAACCTTCCTTTACGCTTTCTGGCTTTCCGACTTCCCTCCCATCATTACCCCATCTCATTTCCTTCATTCTTCTGGCTCCTCTCATGGAGGAGCCGACCGCCAATCCCACCCCTACTCCTATCGATTCCTACAGATCTGTTCCCACTCCTTTCTTGACCAAGACCTATCAGCTTGTCGACGACCGCTCAATCGACCATGTCATTTCATGGAACGACGACGGATCTACCTTCATCGTCTGGAACACCATGGCTTTCGCTAAAGATTTGCTTCCCAAGTATTTCAAGCATAATAACTTCACCAGCTTTCTCCGTCAGCTCAATACTTATGTAATCAATCCTCTACTGGATTTCAATTTCATTCATGTTTCCTTCTCAGCGGTCGTGGATTTTTCTTTCATTTTGGATTTCTTTTTTTGTTCTGTTTTAGGGATTTAGAAAGGTTGTATCGGATCGTTGGGAGTTCGCGAACGAGTGCTTTCGCAAAGGCAAGAAACAGCTTCTTTGTGAGATTCAGCGTCGGAAATTGGTCGGTCCGGTTCCGTCCACTGCTTCTAACGCGGCTGTGGTGACAACCGTTGGTGCTTCAGCGATTCCGTCTGTCCAAGTATTGACATTGACGGGAAATTCTTCAGGTGAAGAACAAGTGATTTCGTCTGATGAGACTCCAACCAGAGCTCTTGCAGAGCTGATTGACGAGAACGATCGGCTGAGAAGAGAGAAAGTTCAGCTCACGGAACAATTGGACGAGGTGAAATCTTTGTGCAATAACATCTTCTCGTTGATGTCGAGCTTCGTTGAAAGTCAATTTAAGAACAGTTTCAAAGTGAGGGAGAGCGTTTTGGAATCGGCAAAATCGCTCGATCTTTTCCCGGTGAAGCGGCCAGCCGGTGAAGAGGGAACGGCGGAGGTGAAGGAGGAGGAGGAGGAGAGGAATCAGATCGGGGCGAAGCGAGCGAGGGAATATAGGGAGGGGGCGACGGAGAGGGCGGAGGATGATACTGCTTTGCGGCTTCAACCACCGGATAGATGGGTAGTCAAAGCAGAGAGGATAAATTGTCAAAAATAAAGTTGATGATGAGGAGAAGACGTGGCAGGATCAGATCCACTGAGAGAATTATGAAACGGATCTGTATTTAACGGTTAGGATAGAGTATGGGCTTTTTCTTCAGATTCTTAGTTCAAGTGATGAGCGATGCAGAGAATCATCTCCCCAAAAGGTGGGAATATGGCACGTGTGACGTGTGCCACCATTTTAGGGGGCAAATTTAGGAACTTTCAATGAATATTCCCCTTTTTACTTCTTTTTCTTTTTCTTTTCTTCTTTTTTTTTTCTTTTTCTTTTTATAAACAAAACAAATTTGTAGATGAAACTGCAAAAATATCAAATCACCAAACCAAAGCATTTAACAAATTTATTCGCATTTTATCTTTACTTTACACACCTACTTCCTTCATCATATATTCAGTTCAGTTATGTTTGAAGTATATCAACTCATACAAGGTCAGAAAAGGAATCTGCGGATAGTTGTGTATGC ATGTTGCTACAAATTCTTTCAATATACAGGAACTTGCTTCTTCATGTTGCTCTGTCTCTCTCGCTTTCTGTTTTTATCATCTTCTTCAATATCCCATCCCTTTTCCTTCATGGCATATTCACTTACATCCACCCCGATAATACCAACAGCGGCGTCCGAGCCGCAATTAGACGACCTGACAGTTCTAGCTCCGGCACTGGACTAAAGGGGTACCGGAACTTGTCCTCAACTGCTGCCGCTGAGATCAAGAAAAGAACAAAGTCGAAGGACAAGGCTGAGTTTGATGAAAGCAAGGCGCAGATCTTCAGGTTAAAGCTGGATGAGAATCATCTGCAAACGCGGATCTATTTCAAAGAATACAGAGATGCTTTCACCTTTTCATTTGTGGGTATTTCTTGTTTAATGCTGCAAATTTTCGTGGGTGCATCAAAAAATTCTGGGGTTTGGGGAAATGGGATTTTTGTTCCTCTTCTGTTTGTGATCTTTGCTGGGTGTAAGCTATTTGTATCTCTCACAAAGGTTGCTTTTGAGAAATCTGCTTCCAGAACGTTGGATAGGCAATTAAGTTTACTCTTTGGAGTTTTTGGGTTTCTTTTTGGACTTCTAACTTGTTCTGCTTTTAGTCCTCTTATATTGGATTTTGATCTCCGTGAAATTGGTGGTATGGGGGCATGCTTTGTTGCTATCTTAATGGGGTTGTGTGCTGGGTTTTTGTTTATACCTGCAACCAAAATCACTCGATCATTTTGGCTTGGAACTGATCAAATTAGATGCAATTTGGATATGGTTTATTGTGGATGGTTTTCTAGGATAGTTTTGTATTCGAGTCAGGCAGCCATGGCTTTCACCACCTTGCTGTGGGTTAACCCATTAGCTGAAATTTTCATTAAGAAGAACATTGGCGAAGGTACAATTGGACATATGTCTAGTGAAATTCGAAATGCTGACAGATTGGTCGGAAGCATAGGATTCTCGAAGGAAGATTTTGCCAAACTTAGGCTTTGGTGTTTGACACTATCTGGTTTCTTGCAAATCATTGCAGTAAGGCAGAACTTGCAAATGTATCTGAACGAAGCTCTGTTATCTTGGTACCAAAGATTGCATGCTGGGAAAGTTCCTGACTTGGATTTCAGTAGAGCAAAGGTTTTTCTACATAATCACTACTTATGTGTGTCTGCTTTGCAGTTTTTTGCTCCACCAGCCTTAGTTTTGCTTTTTGTTGGGTTATCTCAAATTGATATCAACTCTTTCAAAAATACCAATTTGGTAAGTTTTCTTCTTCCCTGTTCTTCTTTTGTCAACCAAGTGGCTCTGTTAATGGCTTGGTGGATTGTCTCCGTACTGACTCTTTATACATCTGCCACCATTGTGCTATATCGTCGTGGTATCTTGTATGTTTCTTGA MLLQILSIYRNLLLHVALSLSLSVFIIFFNIPSLFLHGIFTYIHPDNTNSGVRAAIRRPDSSSSGTGLKGYRNLSSTAAAEIKKRTKSKDKAEFDESKAQIFRLKLDENHLQTRIYFKEYRDAFTFSFVGISCLMLQIFVGASKNSGVWGNGIFVPLLFVIFAGCKLFVSLTKVAFEKSASRTLDRQLSLLFGVFGFLFGLLTCSAFSPLILDFDLREIGGMGACFVAILMGLCAGFLFIPATKITRSFWLGTDQIRCNLDMVYCGWFSRIVLYSSQAAMAFTTLLWVNPLAEIFIKKNIGEGTIGHMSSEIRNADRLVGSIGFSKEDFAKLRLWCLTLSGFLQIIAVRQNLQMYLNEALLSWYQRLHAGKVPDLDFSRAKVFLHNHYLCVSALQFFAPPALVLLFVGLSQIDINSFKNTNLVSFLLPCSSFVNQVALLMAWWIVSVLTLYTSATIVLYRRGILYVS Homology
BLAST of Cucsat.G645 vs. ExPASy Swiss-Prot
Match: Q7SY10 (Transmembrane protein 161B OS=Danio rerio OX=7955 GN=tmem161b PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.7e-07 Identity = 80/317 (25.24%), Postives = 133/317 (41.96%), Query Frame = 0
BLAST of Cucsat.G645 vs. NCBI nr
Match: XP_004140782.1 (uncharacterized protein LOC101217739 [Cucumis sativus] >KGN57359.1 hypothetical protein Csa_009970 [Cucumis sativus]) HSP 1 Score: 894 bits (2311), Expect = 0.0 Identity = 465/467 (99.57%), Postives = 467/467 (100.00%), Query Frame = 0
BLAST of Cucsat.G645 vs. NCBI nr
Match: XP_008439191.1 (PREDICTED: transmembrane protein 161B [Cucumis melo]) HSP 1 Score: 852 bits (2202), Expect = 1.38e-310 Identity = 441/467 (94.43%), Postives = 454/467 (97.22%), Query Frame = 0
BLAST of Cucsat.G645 vs. NCBI nr
Match: XP_038882659.1 (transmembrane protein 161B [Benincasa hispida]) HSP 1 Score: 822 bits (2122), Expect = 2.20e-298 Identity = 425/467 (91.01%), Postives = 441/467 (94.43%), Query Frame = 0
BLAST of Cucsat.G645 vs. NCBI nr
Match: KAA0033628.1 (transmembrane protein 161B [Cucumis melo var. makuwa]) HSP 1 Score: 772 bits (1993), Expect = 1.70e-277 Identity = 397/422 (94.08%), Postives = 409/422 (96.92%), Query Frame = 0
BLAST of Cucsat.G645 vs. NCBI nr
Match: XP_022141264.1 (uncharacterized protein LOC111011705 [Momordica charantia]) HSP 1 Score: 751 bits (1938), Expect = 2.32e-270 Identity = 386/467 (82.66%), Postives = 418/467 (89.51%), Query Frame = 0
BLAST of Cucsat.G645 vs. ExPASy TrEMBL
Match: A0A0A0L8M8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G181950 PE=3 SV=1) HSP 1 Score: 894 bits (2311), Expect = 0.0 Identity = 465/467 (99.57%), Postives = 467/467 (100.00%), Query Frame = 0
BLAST of Cucsat.G645 vs. ExPASy TrEMBL
Match: A0A1S3AYU7 (transmembrane protein 161B OS=Cucumis melo OX=3656 GN=LOC103484062 PE=3 SV=1) HSP 1 Score: 852 bits (2202), Expect = 6.66e-311 Identity = 441/467 (94.43%), Postives = 454/467 (97.22%), Query Frame = 0
BLAST of Cucsat.G645 vs. ExPASy TrEMBL
Match: A0A5A7SSR6 (Transmembrane protein 161B OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold239G00660 PE=3 SV=1) HSP 1 Score: 772 bits (1993), Expect = 8.22e-278 Identity = 397/422 (94.08%), Postives = 409/422 (96.92%), Query Frame = 0
BLAST of Cucsat.G645 vs. ExPASy TrEMBL
Match: A0A6J1CI38 (uncharacterized protein LOC111011705 OS=Momordica charantia OX=3673 GN=LOC111011705 PE=3 SV=1) HSP 1 Score: 751 bits (1938), Expect = 1.12e-270 Identity = 386/467 (82.66%), Postives = 418/467 (89.51%), Query Frame = 0
BLAST of Cucsat.G645 vs. ExPASy TrEMBL
Match: A0A6J1G034 (uncharacterized protein LOC111449456 OS=Cucurbita moschata OX=3662 GN=LOC111449456 PE=3 SV=1) HSP 1 Score: 746 bits (1925), Expect = 1.15e-268 Identity = 384/469 (81.88%), Postives = 422/469 (89.98%), Query Frame = 0
BLAST of Cucsat.G645 vs. TAIR 10
Match: AT5G52180.1 (LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transmembrane protein 161AB, predicted (InterPro:IPR019395); Has 82 Blast hits to 82 proteins in 35 species: Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 450.7 bits (1158), Expect = 1.5e-126 Identity = 232/473 (49.05%), Postives = 324/473 (68.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|