Cucsat.G6390 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G6390
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	DNA primase large subunit
Location	ctg1429: 704526 .. 713092 (+)
RNA-Seq Expression	Cucsat.G6390
Synteny	Cucsat.G6390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCAACTTACGGGTCCATCCCGGTTCAGTTTTCATGGCGCGTTTTAAACTCCATCTATTCTCAGCTTCAGTGCCACGATCAGTGACTGCCATGGAACCCTATCGTTCTCACAGAAAATCTCCCATCTCAACCAATTCCACTACCACTCTCCCACTCTACCGCTCTGCTCCTCCTCTTGAAGTCAGGCTTGAAGATTTTGAGCTTTATGCCATAGATCGTCTTCGAGGTGACACATTTCTCTCTGCCTCGGTTTTCATTTTCTAATCTTATGCTCGTCATCATCTTATATTTTGGTTGCTGTTTATTGGGTTTGTGGTAATTTATGATTTTAAGCGGTCTTGATGGAGTATGGCTTGCCTGGTTATAACATTGCTGAATGAAGCAATGTAATTTAGGGGGTAGGGAGATGGTAGGAGTTTGAATTGTTTTTGTTAGCTAGAGATTTGAATTGAGGGAAGTTGGTGGCTTTATATTTGGACGAATTGGATATTACGAGTTGATGTGCTATGAATCACCAAATAAAGATAACAGAAAGCGTAAAGCAACTGAAAATTTAACACGGAGATTTGCATGGTTTAATGATAGTGTGTAGTGCAATAACAGTGTGTTGAAGGATGACAGTTTATTATTAGAGAATAATTCAGAATATGTAGAGCTATAGAGTTTATGTAGCGAAGCGCACTGATCTGAACTTTAGGGTCAAAATTTGTAAATATGCCAAGGTTTTGGGCCCTGTTCATAATCATTTGAAGCGCCAGACCGTAAATTCAAGGCATTCTAATCGGTGTTACATGCCATTATTAGTGTTATTTTCATCAATGGCTGTTCTAGAAGAATCCTGAACTGGAATCTTTACCCGCTATTGTTGTTTGAGCGCAGTTCTTAAAGGGATTTCTGATGGGTTATCTCGAGGAAAGAAATCTGAAGAAATGGAGAAACTGGTGAGGTTTGATTTTTTTTCACCAACGTTTAAACACTATTATTTTTCCTACTTTTCTCTAATGGCATTATTATTTTTACACTGCACAGGTTAGAGAATTGTTGAAAACCAACATGAAACATCCACAGGCATCTGAGGTTGTGAACAAGGATATAATATCTCACTTTGTTCTGCGCCTTGTGTATTGCCGAACGTAAGTTTACCCCCTTCTTCTTCTTGTACTTCTTTTTCTTCTTCTTTCTCTCTCTTTTAAATTATTTTTTGGCTTAGCTTTTGTTTATGATTATTTTGGCTTGGTCTCAGGGAGGACTTGAGAAAATGGTTTCTTTCTATGGAAACTATGCTATTCCGACATCGTTTTCTTTCTGAAGGTCCTGAATCTCAGGTATACGATACATTCTTTAGTGCTCTCTCCATGCTTGTTCAACTGTCTGTTGCGTGGACACTGCCACTGTGTACTTCAATTCTCTTTTCTCCATTTTCAGAAGCAGGTATTTGCGGAGCTTGGTCTCTCATACAAAGCAATCAGTAATGCAGAATTTGAGGTAATTTAGATATTTAATTTCATTGGCAATAATATCAAATATTTATAGTCCCAAGTTGTCACATTGATCAAAGATTCAAAATGTACAACCTTCTTTACCTTGTGAAATGTATTGGGCCTCTCTTTCTCGTCCATGAGTTTTCTTTGAAATAACTTATACATTTTCCTTCTTGTAGGCTGTAAGGGACAAATTGGTTCAAGTTGCTCGGTTGATTGGTCAGCCTGCACCAAGTAGTAAGAATCATAGTTTTCACTTTTAATCTTCAAACTTGTATAACATCATGTGAGATAATTTTGGAGACCTGAGGGTATATTGAAAGTATTAAATATAGTGTGGGCATTTTAAAAATAAACTCAAAAGTTCAAGTTAATTGTCAATTTCTTTTTCGTCTTGGGTGGGCCTCCTTGTATGTTTGCTGTGTGTTTACTATCTTGTGCTGTAGAGAGTATAGTGTGAGAGTTTATTTTTATATTATCCTTGTGCTCATCTCCTTTTTTTTTTTTTTGCAGGTGATGCTATATACTATAAGGTAACCTCTGTTTAGTCAGAGATTTCTTCTAATATGCATTGCGGTTGCAATCTCAATATGGTTTTGAAATTATTTTGTTTTAGTTCAGGAAGCGGAGTGTTGCAATCGGTAATTTAGTTGATGTTCATATGAATTGTAGAGATGAAACTGTTCATCTGTAAATAATATCAAGATTCACTGTTTCTCTTGATAGAACGTTGTGAGATATCCAATACTAAATTTTTGACCATTTCATCTATTGTCCAAGGAAAAAGAAAAGTTTTCTCGATTGATGGATTATTTCCTTTAGTTCTGTCATTTGTTTGGGAAGTTGAAAACTGCCGATGGATTATTTTACTGTTATTGAGTACTTGGAAATGTTTGGTATTGTGTGGATAGGATAACATACATCACATGAATGCATTCGTACATGGATCAATGGTGGATCCAATTTGGTAACAAAACTTTTTTCCTAAGAAAAAAATGTAATGGGACCCATTTCTCGATACATGAACTATGAAGTGCTATCTTTTTCTTAAATTGTTCTGTTTGAAATATTGCACCTAGATTTCTTGCATCCATGGCTTGATAAGTTGGATACCTTGTTCCTGCTGACGTGGGTCCTTGGTTTTTTATACTTTCTATGATCATTATTGATGAATTTTGTGTTCGTAGAAAAAGAAAAAAAGAAACAAAATGAAAATCCAGCTTGTTGGATGTTCTTTTCTCTAATATGTTTCCTAACTAATCATATGAAGGTACCATGGGAAGAAGTTCCAGAGCTTGTGGCTGGTCGAAGAGTATTCCTCCATAAAGGATATGCATATATTGCTATTTATCAGGTTAATATTATGCTTACATATATGTATATTTGTTTTCATTTCATCAATGAAATTTTTTGTTTCTAGTTAAAAACACATGCCTTTATTTCTATATTTCATGCACTTTCTTGGTCTTAAATAGTTCTTTCTAATTTTCCTCCATATATTTCGTAGGTGGTTTCCCTTGTTGCAACACAATTCCGCAGTTACCTATCGAAGGCCCTAAGTCTGACGAACAGGTTGCTAAGAGAGCTTGATTCTGATCATGTTACATTAAATTTTCCATCAAATTACTATCTCATAAATAATTGCAGTATTCATGGATGATAACTTCGTTTCCTATTACAGAAAGATAATGTGTGATAATTTCATTTTCTCATAAATTTTATTTATTTTATGAAGCTTAAGAAGACCCAAGCTAGTACATGACAAAATTTTCATTTTTTAAATGACTAAAAGCTATGAATTTTGTTTCCAGGAAATGGACATCTACAATAAGAGAACAAGAGAAAGATCGGTTGGCCCCAGTGAGTATTATTAACAGTAAACATGTGTAGTGTACTGTGAACGGCTGTTATACTTGTGGTGCCTGACATATGTTAAATACTTTATAGATAGTAGAAGCCCTTTGCACGAGCTACCTGGGTCCTGACTACTCACAGGTAGTTTATTTTATTAAGTGGTACATTATCACCTGATGTAATCTGATATCATTCGTTGCTTAATATTTCTCCAGCCAAGAGAGTATGCGGATATATCAATAAAGGACCTTGACCAAATAGCTAAAAGTTCATTTCCACTTTGCATGCGACACCTATTTGAAAAGGTTAGAAGACCCCAAAACTTGGCCTAGTAAATCTGGAAGTTGTTCTCTCTCTTCCTCCCTGCTATTTCTTCTTGTTTTTGGTACCTAATATTGAATATATTGGTCAATTTTCATTGATTTATTTTACTCGTGCAGCTGAAAGAAGATCATCATTTGAAGCATGGAGGGAGGATGCAATTAGGTCTCTTTCTCAAGGTTGTACACTGCTGATTTACATTTTGAAGTAATTTTCATTTCTTCTTTCTGTTTGATATTATAATCACTGAAGCTTTGAGTAAATCAAATAAAACTATCTTTCATTCAAGTGCTAAATTGTTTTGTTTTTCTAATGAAGAGTTGAAATGCTCTTATGATATGAAATTGCGCACATGTTCCTCCATTCCCTTTTGCATGGTTAAATTTTTCTTAATGAATGATTAATGAGTAATTTTGATATCAGCTAATTTTTGTTATCATTTGATATGGAACTAGCATTCCTTTCTAGAAACATCCGAAAGATATCAAAGCAGGAGAATCACTTTTTGTACCTAAACGGAAGACTATCGAATTTACACCAAAGCTATATTTCTAGGATCAAAACCATAGGAACATCTGAAAAAAAAGTATTGACTGGTTTGAAGGTTTAAGCGGTAAATGCTGTTTAATTTAGATGATCAATGATATTTGTATGTGAGGAGAATCAACCATCATGAATAAATAATATGTAGTTGATTGAAGTATGCTTAGTATAGTTGATAGAAGTATTTATGTGCGATGCTCCTTTCATTATTGGTATGGAGCCTTTTTAATCTTTACTCTTCAACTCTTCACATGCAGGGTGTTGGTTTGAAGCTTGATGATGCCCTGGCTTTCTGGAGAGCTGAGTTCTCCCAGAGAGTAAGCATAACATTACTCTTTTAGGTTATCTGCAATGGAATAAACATCAGTAAATACAACAGCACAGGAGCATGAATATTCATTATTTTCTTTGCCTTTTCTTCATAAGCTATATACTGGAACCTGATGACCAGTTATAATTGTTTGTTTGTTTATTTATTTATTATAAATTGGGTTTCTTTTCATTATTTAAGTTATAGTTAATGTGCACTTCAATTATATAAGAAGTAAATTTACATCCTAATTTTTATTCACGAATAATTATTGATACAAGATTGTAGGACCCAGTTATAGAAATAGAGAATTATTAGTAGAATAGTAGTACGATCATTAGAATTTAGAAGGGGCATATTAATAACTAGATAGCATGTTTGCTAGGGCTTTTACTTATAAATAGGAGAAGTAGGTTGGAAGCAAAGGTGTGAAGAATTTTGTAATGATTTCCTTTGGGAAATTTGAGAGAGAGTAGCCCTCTCAAAAGGCATGTTATATTGTAGTTTTTCATTGATGTTGCAATATAAATCTATCTTTTAGTGTTCTTTGTTGTTCTTGAGTATTCTTTGAAGATATCCTAACAGTTTCTTAACAAGAGTTTACACGATACTCTCAATCAAAATTAATTATAATTGGACTATGATCACAAAATAAGTTAGATTTAAAAGCACTGGGAAGTGGGAGGAGCAATAGGACTTAGTCACCTTTCCTTGTCAATAAATATTATATTTCATGTCTTCTTAGCCCTGTCCTCACTGATTATATTCACACTCATTCATAGCTATTGCTTTATCCTTTTATTGTAGGTTGGTGCTGAGAGGTTTGACAAAGAATATGCATACAGTATCAGGCATAACTATGGAAAAGAAGGCAAGAGAGTGGTAAGAGACGACCTTTAAAATTCTTTAAAATGCAGATTTGTTTTTGAAACAGGAAAACTTTTAAGATGCAGAATTAGTAGGGTCAACACATATAGATTTATGTTTTAGGAAACGTCAAATATTTTTGTATCTTTTTTTGACATTTTCTAGCGACCTATTTCTCAAGAACATGATTTAATGGTTTCTTATGTTTTATTTGACCTCTCCATCTTTGTCCTACTCATACAGCTATAAGCAGATTTGTATAATTTTGGGCTCTCTTGATTTGTATCTATGATTCTTCTATCTTTCTCTTCTGTTTTATTTGGTTTCTATTACTTCTCTAGGCCTTGCATCAGATCTATTACGTTGTTGGCATGACCTAAGCTTGTCAAAATATGTACTAGTAATGCAGTATGATGATAGCAGATGTTGGATTTAAGTTTTTAATATAACCGCTTCCATTAATGTTCCCCTATTTTGCCTATTTATAGATTAAAATTCTTTGACAGAAAGTTGTCCACATACGTATCTATTTACTTCGGTACTGTGTTTTATTTATATAATCATCCGATTAATTTATTTTTGCCTTTTTACGTTAGAAGATCCATTAGGGAGCCGGCCTACACACAATTTCTTTGTAAAATTATGATCTATTTAATATCTTTACTAGGATTATTCGCCTTATTCCTGTCAAAAAGTAATCTCATCATCACCTAGTGTTGGAGATCATCATGGATGTCCCTATAGACATTTCAGGTACGCTTGTTTAAACAATTTCCTGATATCTTGAATTTTAGCCTGAAAAGATTTAACCAATATATTTGTTTGTATGTTGCATAGAAAGAAAGCCGTGTTGTGTTCAAAAGTTGTTTTTACGCTAAAGTGGGACCTTTAATTTGGAATAGTAGAAGATGTGGAATAGAGGTTTAGAGCAGCAACGAGGCCTGTCAGGAAACTAAGTTAATTATGCATGCTAAGGGTAGTTTGGGCTTTTGGTGCATGATTCTATTAGAAAGGGTTTTAAAAGGCCCTCTTGGTTGTGCACGTAGGCACTAGTTGCAAGTCTGGCAAAAGAAGGTGCACATTACACACGTGCATGCTTTATGAAGCCCCAACACTCAAAAGCCCTAGACCTTGGGGCTTTTTCATTATTTTTAAATAATAGTAATAATTAAGTGTTTTCCTTATTTATTAACTAAAAAACCGAGTATATTTTTTCCACTTCAACTTTGCTTTACCTATCCTGTATAGTACTTTTATATATAGTGCACCTCCAAAAAAACATCCATGCTTTTTTTGCGCCTTGCACTTAATCCTTAGAAGACTATTGTACTTTATTCGGTCCATCCTAAGCTTTAAAAAGACCAATTAGAGGCACATGCAAAGAAGGAAGGAAAAACAAATATATCAAGTAGGGAGGAAGAGAGGGTTAATTTTCATGCTAATTAGGTTAGAGCTTTTTAGTCTTGAAAATTTCTAATTAGTTTTTTTCTACTTGTATCTCACCTTGAATTAGTTTTTGGCTCAAGGAAGCACTAATAAAAGGTAGCAAGGTTTCAGGCCTAACATCTTGGTAATAGAGTAGATCAAAGTATCTTGTGATATGGCAGTGAAGATGGTAAGGAATGTATAGAATTGAAGTTGGTATTTAAGACGGTCCAAATGTAAGTGTATTAATTAGCTGTGCCCGTGTTGAAAGGGCTTGCTATTTTTTAGTGAGGGATGGAGTCAATAATATACAAACTAGATTCCATGATGCCAGAGCAAGTAAATCTTCATCTATCTACTGTCTGGATGATGTTTTTGCCATTTTCTGCTTCACTTTGTTGCATTGTTTTTTCATGATCATTTTCTTAATTACAACGTAAAAGTTACACTACTTTCAGGTATATTTTTCTCATTGTTTGACATATGGATTTCTTTAACAGTGAAGACAACTTAAGAGCAGCTCTTGGTAAAATGGGAGTAAATAACCGGACAATGGAAGATATAATGGACAAAGTGCGAAATAGACATTATCAGGTTCTCAATTTACTGCCTCTTAATTTTTATGTTATGTCAGTTGGGATTAATGTTAATAGTTGTCATGTATCTTTAGTTGGCATGCACCTTGACATTTGAATCAATCCATGGCTCGACATGTGATGCTGGGATTAATCATCCAAACCAGTACTTCATTGATAGTCAAAAGGTCCTGCAATCTAAGGTAGATCATTTTTCTCACAAGTGCTTTAGTTTTCCTTTTGTGCATAATATTCTGTGGTCCTGCCTTGATGAGTTCTTCACATCTATCCTTGTTTAGTTGGTATTGTTATGGGAGTTATATACACCAAAGCCAATATCTACTGCAGATTCAACTACACATAGTCTGTCATTGTGTTGCTCATGTAACTTCATCGTGTTGTAATTTTGATGCCTTCTTTTATGGACACTGAATTTTGCTACCATATGCGTAATATTGCCCTTGTGAGAGTTTGTCCCTTCCCTTATCACGCAACTTAGGCTGACCGCATGACAGATTCTGAACTCAATGGATGCTACCCTACTATGAGTTATTTTATTATCCAGGGAGTTAACGTAGGTGATTTTAGGGACATCAGCATTGTTTTCGAGTTTGGCCACTATGGCAAGAAATACCATTATGTGAAATGTTTAGAGCCTTGGCTACGAAGGATCGAAGTTGGGGCCGTATATCTTGTTTTAGACAAAGTTTGTTCACATAGCATACAATTCAAAGTTGAAACTTAATACATGCACTTGTTATTTGCAGAATAATTCAACATCCTAGTAACACGTTCAAGCGCCTCAAGTGGGAATCTACTTGGGATTCTTCAGGTTTGTCAGTTCTTGATACCTACTCATATTGTTTGGTATCAAATCACATTTCATGCAGCCTTTTGTTCCACTGGGAAATTCTCTTACAAGGTGAGTCAAACCATTAAGATCTTTGATCTTTAGAACTGTAAATTTATACATTTATACATGTAAAGTTCTCAACTGGTCCCTAGATGTTCTTTTCCTTCAAGGTGGATGAGGTTTTTGTTGCTTTGGATAGTTCTATTGTCGAAATTTTCTTAGTCGTTTTATTCTTCAATATTTTATTTTATTTTGGCTCTTGTAATATTTGGAAGCCTTCTACTCTACTTCTTTGGTTTCTCTTTCATTTTCTAGCAGTTTGGAACTTTCTAATTGTCCATTTTTTTTAATTCATTGTTTAGTTGGGTATTGTTATGCGAGGAAGAAGAATCAAAATTTTGATCTTTAGATCGAGCATGCAATTTATTTATGTT

Coding sequence (CDS)

ACCAACTTACGGGTCCATCCCGGTTCAGTTTTCATGGCGCGTTTTAAACTCCATCTATTCTCAGCTTCAGTGCCACGATCAGTGACTGCCATGGAACCCTATCGTTCTCACAGAAAATCTCCCATCTCAACCAATTCCACTACCACTCTCCCACTCTACCGCTCTGCTCCTCCTCTTGAAGTCAGGCTTGAAGATTTTGAGCTTTATGCCATAGATCGTCTTCGAGTTCTTAAAGGGATTTCTGATGGGTTATCTCGAGGAAAGAAATCTGAAGAAATGGAGAAACTGGTTAGAGAATTGTTGAAAACCAACATGAAACATCCACAGGCATCTGAGGTTGTGAACAAGGATATAATATCTCACTTTGTTCTGCGCCTTGTGTATTGCCGAACGGAGGACTTGAGAAAATGGTTTCTTTCTATGGAAACTATGCTATTCCGACATCGTTTTCTTTCTGAAGGTCCTGAATCTCAGAAGCAGGTATTTGCGGAGCTTGGTCTCTCATACAAAGCAATCAGTAATGCAGAATTTGAGGCTGTAAGGGACAAATTGGTTCAAGTTGCTCGGTTGATTGGTCAGCCTGCACCAAGTAGTGATGCTATATACTATAAGGTACCATGGGAAGAAGTTCCAGAGCTTGTGGCTGGTCGAAGAGTATTCCTCCATAAAGGATATGCATATATTGCTATTTATCAGGTGGTTTCCCTTGTTGCAACACAATTCCGCAGTTACCTATCGAAGGCCCTAAGTCTGACGAACAGGAAATGGACATCTACAATAAGAGAACAAGAGAAAGATCGGTTGGCCCCAATAGTAGAAGCCCTTTGCACGAGCTACCTGGGTCCTGACTACTCACAGCCAAGAGAGTATGCGGATATATCAATAAAGGACCTTGACCAAATAGCTAAAAGTTCATTTCCACTTTGCATGCGACACCTATTTGAAAAGCTGAAAGAAGATCATCATTTGAAGCATGGAGGGAGGATGCAATTAGGTCTCTTTCTCAAGGGTGTTGGTTTGAAGCTTGATGATGCCCTGGCTTTCTGGAGAGCTGAGTTCTCCCAGAGAGTTGGTGCTGAGAGGTTTGACAAAGAATATGCATACAGTATCAGGCATAACTATGGAAAAGAAGGCAAGAGAGTGGATTATTCGCCTTATTCCTGTCAAAAAGTAATCTCATCATCACCTAGTGTTGGAGATCATCATGGATGTCCCTATAGACATTTCAGTGAAGACAACTTAAGAGCAGCTCTTGGTAAAATGGGAGTAAATAACCGGACAATGGAAGATATAATGGACAAAGTGCGAAATAGACATTATCAGTTGGCATGCACCTTGACATTTGAATCAATCCATGGCTCGACATGTGATGCTGGGATTAATCATCCAAACCAGTACTTCATTGATAGTCAAAAGGTCCTGCAATCTAAGAATAATTCAACATCCTAG

Protein sequence

TNLRVHPGSVFMARFKLHLFSASVPRSVTAMEPYRSHRKSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKSEEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRFLSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEVPELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLAPIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRVDYSPYSCQKVISSSPSVGDHHGCPYRHFSEDNLRAALGKMGVNNRTMEDIMDKVRNRHYQLACTLTFESIHGSTCDAGINHPNQYFIDSQKVLQSKNNSTS

Homology

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BLAST of Cucsat.G6390 vs. ExPASy Swiss-Prot
Match: Q84WJ2 (Probable DNA primase large subunit OS=Arabidopsis thaliana OX=3702 GN=At1g67320 PE=2 SV=2)

HSP 1 Score: 485.7 bits (1249), Expect = 4.5e-136
Identity = 243/352 (69.03%), Postives = 294/352 (83.52%), Query Frame = 0


Query: 6   MEPYRSHRKSPISTN--STTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGK 65
           ME  RS +++ +S +  ST TLPLY +AP +EVRLE+FEL+AIDRLRVLKG+SDGL+R +
Sbjct: 1   MEVIRSQKRT-VSNDVVSTPTLPLYLTAPHMEVRLEEFELFAIDRLRVLKGVSDGLARAR 60

Query: 66  KSEEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRH 125
              EM+ LV  L K +M+    SE++NKDIISHFVLRLVYCR+++L+KWFLSMET LFRH
Sbjct: 61  NPNEMDDLVETLWKEHMRLSNVSEMINKDIISHFVLRLVYCRSDELKKWFLSMETALFRH 120

Query: 126 RFLSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWE 185
           RF  +  E Q+ +  E GL YKA+  AE E+++++L  VAR  GQ +   + IYYKVP+E
Sbjct: 121 RFRLKKIEEQRAIVGEFGLPYKAVIGAELESLKERLGLVARSHGQISSDVENIYYKVPFE 180

Query: 186 EVPELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRL 245
           EVP+LVA RRV L KG+A++A  Q+VSLV TQFRS+LSKAL LTNRKWT+TIRE+EKDRL
Sbjct: 181 EVPDLVASRRVLLQKGFAFVAGTQLVSLVVTQFRSHLSKALILTNRKWTTTIREREKDRL 240

Query: 246 APIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGR 305
            PIVEAL TSYLGPDYSQ  EYADIS+KD+DQ++KSSFPLCMRHLFEKL+EDHHLKHGGR
Sbjct: 241 TPIVEALSTSYLGPDYSQSNEYADISLKDIDQVSKSSFPLCMRHLFEKLREDHHLKHGGR 300

Query: 306 MQLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKR 356
           MQLGLFLKGVGLKLDDALAFWR EF+++VG+ERFDKEYAY+IRHNYGKEGKR
Sbjct: 301 MQLGLFLKGVGLKLDDALAFWREEFTKKVGSERFDKEYAYAIRHNYGKEGKR 351

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BLAST of Cucsat.G6390 vs. ExPASy Swiss-Prot
Match: O89044 (DNA primase large subunit OS=Rattus norvegicus OX=10116 GN=Prim2 PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 7.3e-62
Identity = 132/339 (38.94%), Postives = 205/339 (60.47%), Query Frame = 0


Query: 24  TLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISD-GLSRGKKSEEME-KLVRELLKTNMK 83
           +L  Y   P   + L +FE  A DR+++LK I + G+S  K +E+ + KL  E+ K    
Sbjct: 25  SLQFYLQPPTENISLTEFESLAFDRVKLLKAIENLGVSYVKGTEQYQSKLEAEIRKLKFS 84

Query: 84  HPQ----ASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRFLSEGPESQKQVF 143
           + +      E   +D ISHF+LRL YC++EDLR+WF+  E  L R RF     +  +   
Sbjct: 85  YRENLEDEYEPRRRDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFSILPKDKVQSFL 144

Query: 144 AELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEVPELVAGRRVFLH 203
            +  L ++AIS+ E       ++  +  +      S+++ YKVP+ +  +L  GR+V+L 
Sbjct: 145 KDTHLHFEAISDEEKTLREQDIMASSPSLSGVRWESESV-YKVPFADALDLFRGRKVYLE 204

Query: 204 KGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLAPIVEALCTSYLGP 263
            G+AY+ +  +V+++  +FR+ LSKAL+LT R   +    Q  +RL P++  L  SY G 
Sbjct: 205 DGFAYVPLKDIVAIILNEFRATLSKALALTARSLPAV---QSDERLQPLLSHLSHSYTGQ 264

Query: 264 DYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQLGLFLKGVGLKL 323
           DYS  +    IS+  +D ++  SFP CMR L + L+E+HHL+HGGRMQ GLFLKG+GL L
Sbjct: 265 DYSTQKSTGKISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTL 324

Query: 324 DDALAFWRAEFSQ-RVGAERFDKEYAYSIRHNYGKEGKR 356
           + AL FW+ EF + ++  ++FDK Y+Y+IRH++GKEGKR
Sbjct: 325 EQALQFWKQEFIKGKMDPDKFDKGYSYNIRHSFGKEGKR 359

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BLAST of Cucsat.G6390 vs. ExPASy Swiss-Prot
Match: P33610 (DNA primase large subunit OS=Mus musculus OX=10090 GN=Prim2 PE=1 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.2e-61
Identity = 132/339 (38.94%), Postives = 205/339 (60.47%), Query Frame = 0


Query: 24  TLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISD-GLSRGKKSEEME-KLVRELLKTNMK 83
           +L  Y   P   + L +FE  A DR+++LK I + G+S  K +E+ + KL  E+ K    
Sbjct: 25  SLQFYLQPPTENISLTEFENLAFDRVKLLKAIENLGVSYVKGTEQYQSKLEAEIRKLKFS 84

Query: 84  HPQ----ASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRFLSEGPESQKQVF 143
           + +      E   +D ISHF+LRL YC++EDLR+WF+  E  L R RF     +  +   
Sbjct: 85  YRENLEDEYEPRRRDHISHFILRLAYCQSEDLRRWFIQQEMDLLRFRFSILPKDKVQSFL 144

Query: 144 AELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEVPELVAGRRVFLH 203
            +  L ++AIS+ E       ++  +  +      S+++ YKVP+ +  +L  GR+V+L 
Sbjct: 145 KDSHLHFEAISDEEKTLREQDIMASSPSLSGIKLESESV-YKVPFADALDLFRGRKVYLE 204

Query: 204 KGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLAPIVEALCTSYLGP 263
            G+AY+ +  +V+++  +FR+ LSKAL+LT R   +    Q  +RL P++  L  SY G 
Sbjct: 205 DGFAYVPLKDIVAIILNEFRATLSKALALTARSLPAV---QSDERLQPLLNHLSHSYTGQ 264

Query: 264 DYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQLGLFLKGVGLKL 323
           DYS  +    IS+  +D ++  SFP CMR L + L+E+HHL+HGGRMQ GLFLKG+GL L
Sbjct: 265 DYSTQKNTGKISLDQIDSLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTL 324

Query: 324 DDALAFWRAEFSQ-RVGAERFDKEYAYSIRHNYGKEGKR 356
           + AL FW+ EF + ++  ++FDK Y+Y+IRH++GKEGKR
Sbjct: 325 EQALQFWKQEFIRGKMDPDKFDKGYSYNIRHSFGKEGKR 359

[Close]

BLAST of Cucsat.G6390 vs. ExPASy Swiss-Prot
Match: P49643 (DNA primase large subunit OS=Homo sapiens OX=9606 GN=PRIM2 PE=1 SV=2)

HSP 1 Score: 235.3 bits (599), Expect = 1.1e-60
Identity = 132/338 (39.05%), Postives = 204/338 (60.36%), Query Frame = 0


Query: 25  LPLYRSAPPLEVRLEDFELYAIDRLRVLKGISD-GLSRGKKSEEME-KLVRELLKTNMKH 84
           L  Y   P   + L +FE  AIDR+++LK + + G+S  K +E+ + KL  EL K    +
Sbjct: 26  LQFYLQPPSENISLIEFENLAIDRVKLLKSVENLGVSYVKGTEQYQSKLESELRKLKFSY 85

Query: 85  PQ----ASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRFLSEGPESQKQVFA 144
            +      E   +D ISHF+LRL YC++E+LR+WF+  E  L R RF     +  +    
Sbjct: 86  RENLEDEYEPRRRDHISHFILRLAYCQSEELRRWFIQQEMDLLRFRFSILPKDKIQDFLK 145

Query: 145 ELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEVPELVAGRRVFLHK 204
           +  L ++AIS+ E      ++V  +  +       ++I YK+P+ +  +L  GR+V+L  
Sbjct: 146 DSQLQFEAISDEEKTLREQEIVASSPSLSGLKLGFESI-YKIPFADALDLFRGRKVYLED 205

Query: 205 GYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLAPIVEALCTSYLGPD 264
           G+AY+ +  +V+++  +FR+ LSKAL+LT R   +    Q  +RL P++  L  SY G D
Sbjct: 206 GFAYVPLKDIVAIILNEFRAKLSKALALTARSLPAV---QSDERLQPLLNHLSHSYTGQD 265

Query: 265 YSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQLGLFLKGVGLKLD 324
           YS       IS+  +D ++  SFP CMR L + L+E+HHL+HGGRMQ GLFLKG+GL L+
Sbjct: 266 YSTQGNVGKISLDQIDLLSTKSFPPCMRQLHKALRENHHLRHGGRMQYGLFLKGIGLTLE 325

Query: 325 DALAFWRAEFSQ-RVGAERFDKEYAYSIRHNYGKEGKR 356
            AL FW+ EF + ++  ++FDK Y+Y+IRH++GKEGKR
Sbjct: 326 QALQFWKQEFIKGKMDPDKFDKGYSYNIRHSFGKEGKR 359

[Close]

BLAST of Cucsat.G6390 vs. ExPASy Swiss-Prot
Match: Q9VPH2 (DNA primase large subunit OS=Drosophila melanogaster OX=7227 GN=Prim2 PE=1 SV=2)

HSP 1 Score: 232.6 bits (592), Expect = 6.8e-60
Identity = 131/358 (36.59%), Postives = 213/358 (59.50%), Query Frame = 0


Query: 17  ISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKK--SEEMEKLV-- 76
           + T     + LY   P  +V +++FE  A++RLR+L+ +    +R  +  S+E +++V  
Sbjct: 20  LETKYPHNVMLYHYPPTEDVHIDEFEELALERLRLLRVLDRASTRNLRVLSDEWKEIVSA 79

Query: 77  ---RELLKT---------NMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETML 136
              RE L++         + KH    +   +D +SHF+LRL YCR+EDL +WF++ E  L
Sbjct: 80  DLTREGLRSYLRLCSTGGSAKHEADIQTRRRDYLSHFILRLAYCRSEDLARWFVAREMEL 139

Query: 137 FRHRFLSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAI-YYK 196
           FR++F +      KQ     G     ++ A+ + V+D L +    +GQ     + + +YK
Sbjct: 140 FRYKFAALSSFEVKQFLEANGFEIHPLTEAQKDEVKDGLYE--STVGQSVAKIELLDFYK 199

Query: 197 VPWEEVPELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQE 256
           VP+ +V +LV GRR FL  GYAY+  + +VSLV T+ +  + + L        + + + E
Sbjct: 200 VPFTQVLDLVRGRRCFLKAGYAYVNTHDLVSLVGTKQQDEIEQGLQAAK----TMVEDVE 259

Query: 257 KD-RLAPIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHL 316
            D R++  ++AL  SY G DY+  R+ A + I+ LDQ++K+S PLCMR   E ++ +HH+
Sbjct: 260 ADERISRTLKALHNSYTGRDYTVCRD-AAVPIESLDQLSKTSMPLCMRMCHEHIRANHHI 319

Query: 317 KHGGRMQLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 357
           KH GRMQ GLFLKG+G+ L+D+L FWR EF++++ A++F + Y Y+I HNYGK+G  V
Sbjct: 320 KHSGRMQYGLFLKGIGVALEDSLRFWREEFTKKMDADKFTRSYEYNIYHNYGKKGSMV 370

[Close]

BLAST of Cucsat.G6390 vs. NCBI nr
Match: KGN46457.1 (hypothetical protein Csa_005048 [Cucumis sativus])

HSP 1 Score: 707 bits (1824), Expect = 8.99e-255
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   RSVTAMEPYRSHRKSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLS 60
           RSVTAMEPYRSHRKSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLS
Sbjct: 15  RSVTAMEPYRSHRKSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLS 74

Query: 61  RGKKSEEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETML 120
           RGKKSEEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETML
Sbjct: 75  RGKKSEEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETML 134

Query: 121 FRHRFLSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKV 180
           FRHRFLSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKV
Sbjct: 135 FRHRFLSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKV 194

Query: 181 PWEEVPELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEK 240
           PWEEVPELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEK
Sbjct: 195 PWEEVPELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEK 254

Query: 241 DRLAPIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKH 300
           DRLAPIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKH
Sbjct: 255 DRLAPIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKH 314

Query: 301 GGRMQLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 356
           GGRMQLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV
Sbjct: 315 GGRMQLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 370

[Close]

BLAST of Cucsat.G6390 vs. NCBI nr
Match: XP_004140536.1 (probable DNA primase large subunit [Cucumis sativus])

HSP 1 Score: 699 bits (1805), Expect = 3.49e-252
Identity = 351/351 (100.00%), Postives = 351/351 (100.00%), Query Frame = 0


Query: 6   MEPYRSHRKSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS 65
           MEPYRSHRKSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS
Sbjct: 1   MEPYRSHRKSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS 60

Query: 66  EEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF 125
           EEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF
Sbjct: 61  EEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF 120

Query: 126 LSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV 185
           LSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV
Sbjct: 121 LSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV 180

Query: 186 PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLAP 245
           PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLAP
Sbjct: 181 PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLAP 240

Query: 246 IVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQ 305
           IVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQ
Sbjct: 241 IVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQ 300

Query: 306 LGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 356
           LGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV
Sbjct: 301 LGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 351

[Close]

BLAST of Cucsat.G6390 vs. NCBI nr
Match: XP_008459852.1 (PREDICTED: probable DNA primase large subunit [Cucumis melo])

HSP 1 Score: 682 bits (1761), Expect = 1.76e-245
Identity = 343/351 (97.72%), Postives = 344/351 (98.01%), Query Frame = 0


Query: 6   MEPYRSHRKSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS 65
           MEPY   RKS +STNSTT LPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS
Sbjct: 1   MEPYLPQRKSSVSTNSTTALPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS 60

Query: 66  EEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF 125
           EEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF
Sbjct: 61  EEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF 120

Query: 126 LSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV 185
           LSE PESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV
Sbjct: 121 LSESPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV 180

Query: 186 PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLAP 245
           PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRL P
Sbjct: 181 PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLTP 240

Query: 246 IVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQ 305
           IVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQ
Sbjct: 241 IVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQ 300

Query: 306 LGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 356
           LGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV
Sbjct: 301 LGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 351

[Close]

BLAST of Cucsat.G6390 vs. NCBI nr
Match: TYK24680.1 (putative DNA primase large subunit [Cucumis melo var. makuwa])

HSP 1 Score: 679 bits (1753), Expect = 2.60e-243
Identity = 341/351 (97.15%), Postives = 343/351 (97.72%), Query Frame = 0


Query: 6   MEPYRSHRKSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS 65
           MEPY   RKS +STNSTT LPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS
Sbjct: 1   MEPYLPQRKSSVSTNSTTALPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS 60

Query: 66  EEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF 125
           EEMEKLV+ELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF
Sbjct: 61  EEMEKLVKELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF 120

Query: 126 LSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV 185
           LSE PESQKQVFAELGLSYKAI NAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV
Sbjct: 121 LSESPESQKQVFAELGLSYKAIRNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV 180

Query: 186 PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLAP 245
           PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRL P
Sbjct: 181 PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLTP 240

Query: 246 IVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQ 305
           IVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQ
Sbjct: 241 IVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQ 300

Query: 306 LGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 356
           LGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV
Sbjct: 301 LGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 351

[Close]

BLAST of Cucsat.G6390 vs. NCBI nr
Match: KAA0039817.1 (putative DNA primase large subunit [Cucumis melo var. makuwa])

HSP 1 Score: 675 bits (1741), Expect = 1.81e-241
Identity = 341/352 (96.88%), Postives = 343/352 (97.44%), Query Frame = 0


Query: 6   MEPYRSHRKSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS 65
           MEPY   RKS +STNSTT LPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS
Sbjct: 1   MEPYLPQRKSSVSTNSTTALPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS 60

Query: 66  EEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF 125
           EEMEKLV+ELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF
Sbjct: 61  EEMEKLVKELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF 120

Query: 126 LSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV 185
           LSE PESQKQVFAELGLSYKAI NAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV
Sbjct: 121 LSESPESQKQVFAELGLSYKAIRNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV 180

Query: 186 PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNR-KWTSTIREQEKDRLA 245
           PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNR KWTSTIREQEKDRL 
Sbjct: 181 PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRLKWTSTIREQEKDRLT 240

Query: 246 PIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRM 305
           PIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRM
Sbjct: 241 PIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRM 300

Query: 306 QLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 356
           QLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV
Sbjct: 301 QLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 352

[Close]

BLAST of Cucsat.G6390 vs. ExPASy TrEMBL
Match: A0A0A0KDK9 (DNA primase large subunit OS=Cucumis sativus OX=3659 GN=Csa_6G094750 PE=3 SV=1)

HSP 1 Score: 707 bits (1824), Expect = 4.35e-255
Identity = 356/356 (100.00%), Postives = 356/356 (100.00%), Query Frame = 0


Query: 1   RSVTAMEPYRSHRKSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLS 60
           RSVTAMEPYRSHRKSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLS
Sbjct: 15  RSVTAMEPYRSHRKSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLS 74

Query: 61  RGKKSEEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETML 120
           RGKKSEEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETML
Sbjct: 75  RGKKSEEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETML 134

Query: 121 FRHRFLSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKV 180
           FRHRFLSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKV
Sbjct: 135 FRHRFLSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKV 194

Query: 181 PWEEVPELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEK 240
           PWEEVPELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEK
Sbjct: 195 PWEEVPELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEK 254

Query: 241 DRLAPIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKH 300
           DRLAPIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKH
Sbjct: 255 DRLAPIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKH 314

Query: 301 GGRMQLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 356
           GGRMQLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV
Sbjct: 315 GGRMQLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 370

[Close]

BLAST of Cucsat.G6390 vs. ExPASy TrEMBL
Match: A0A1S3CBL6 (probable DNA primase large subunit OS=Cucumis melo OX=3656 GN=LOC103498852 PE=3 SV=1)

HSP 1 Score: 682 bits (1761), Expect = 8.50e-246
Identity = 343/351 (97.72%), Postives = 344/351 (98.01%), Query Frame = 0


Query: 6   MEPYRSHRKSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS 65
           MEPY   RKS +STNSTT LPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS
Sbjct: 1   MEPYLPQRKSSVSTNSTTALPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS 60

Query: 66  EEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF 125
           EEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF
Sbjct: 61  EEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF 120

Query: 126 LSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV 185
           LSE PESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV
Sbjct: 121 LSESPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV 180

Query: 186 PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLAP 245
           PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRL P
Sbjct: 181 PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLTP 240

Query: 246 IVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQ 305
           IVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQ
Sbjct: 241 IVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQ 300

Query: 306 LGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 356
           LGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV
Sbjct: 301 LGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 351

[Close]

BLAST of Cucsat.G6390 vs. ExPASy TrEMBL
Match: A0A5D3DN30 (DNA primase large subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002300 PE=3 SV=1)

HSP 1 Score: 679 bits (1753), Expect = 1.26e-243
Identity = 341/351 (97.15%), Postives = 343/351 (97.72%), Query Frame = 0


Query: 6   MEPYRSHRKSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS 65
           MEPY   RKS +STNSTT LPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS
Sbjct: 1   MEPYLPQRKSSVSTNSTTALPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS 60

Query: 66  EEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF 125
           EEMEKLV+ELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF
Sbjct: 61  EEMEKLVKELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF 120

Query: 126 LSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV 185
           LSE PESQKQVFAELGLSYKAI NAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV
Sbjct: 121 LSESPESQKQVFAELGLSYKAIRNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV 180

Query: 186 PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLAP 245
           PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRL P
Sbjct: 181 PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLTP 240

Query: 246 IVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQ 305
           IVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQ
Sbjct: 241 IVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQ 300

Query: 306 LGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 356
           LGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV
Sbjct: 301 LGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 351

[Close]

BLAST of Cucsat.G6390 vs. ExPASy TrEMBL
Match: A0A5A7TE64 (DNA primase large subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00920 PE=3 SV=1)

HSP 1 Score: 675 bits (1741), Expect = 8.74e-242
Identity = 341/352 (96.88%), Postives = 343/352 (97.44%), Query Frame = 0


Query: 6   MEPYRSHRKSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS 65
           MEPY   RKS +STNSTT LPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS
Sbjct: 1   MEPYLPQRKSSVSTNSTTALPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS 60

Query: 66  EEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF 125
           EEMEKLV+ELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF
Sbjct: 61  EEMEKLVKELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF 120

Query: 126 LSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV 185
           LSE PESQKQVFAELGLSYKAI NAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV
Sbjct: 121 LSESPESQKQVFAELGLSYKAIRNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV 180

Query: 186 PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNR-KWTSTIREQEKDRLA 245
           PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNR KWTSTIREQEKDRL 
Sbjct: 181 PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRLKWTSTIREQEKDRLT 240

Query: 246 PIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRM 305
           PIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRM
Sbjct: 241 PIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRM 300

Query: 306 QLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 356
           QLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV
Sbjct: 301 QLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 352

[Close]

BLAST of Cucsat.G6390 vs. ExPASy TrEMBL
Match: A0A6J1H6N8 (probable DNA primase large subunit isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111460608 PE=3 SV=1)

HSP 1 Score: 648 bits (1671), Expect = 4.30e-232
Identity = 324/351 (92.31%), Postives = 336/351 (95.73%), Query Frame = 0


Query: 6   MEPYRSHRKSPISTNSTTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGKKS 65
           ME +RS RKS  +T S+TTLPLYRSAPPLEVRLE+FELYAIDRLRVLKGISDGLSRGKKS
Sbjct: 1   MELHRSQRKSSTATISSTTLPLYRSAPPLEVRLEEFELYAIDRLRVLKGISDGLSRGKKS 60

Query: 66  EEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF 125
           E+MEKLVR+LLK +MKHPQASE VNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF
Sbjct: 61  EDMEKLVRDLLKAHMKHPQASEAVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRHRF 120

Query: 126 LSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWEEV 185
           LSE PESQKQVF+ELGLSYKAI  AEFEAV+DKLVQVARLIGQP PS+DAIYYKVPWEEV
Sbjct: 121 LSESPESQKQVFSELGLSYKAIGYAEFEAVKDKLVQVARLIGQPVPSADAIYYKVPWEEV 180

Query: 186 PELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLAP 245
           PELVAGRRV LHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRL P
Sbjct: 181 PELVAGRRVLLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLTP 240

Query: 246 IVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQ 305
           IVEALCTSYLGPDYSQP EYADISIKDL+QIAKSSFPLCMRHLF+KLKEDHHLKHGGRMQ
Sbjct: 241 IVEALCTSYLGPDYSQPTEYADISIKDLEQIAKSSFPLCMRHLFDKLKEDHHLKHGGRMQ 300

Query: 306 LGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKRV 356
           LGLFLKGVGLKLDDALAFWRAEFSQRVG ERFDKEYAYSIRHNYGKEGKRV
Sbjct: 301 LGLFLKGVGLKLDDALAFWRAEFSQRVGVERFDKEYAYSIRHNYGKEGKRV 351

[Close]

BLAST of Cucsat.G6390 vs. TAIR 10
Match: AT1G67320.2 (DNA primase, large subunit family )

HSP 1 Score: 485.7 bits (1249), Expect = 3.2e-137
Identity = 243/352 (69.03%), Postives = 294/352 (83.52%), Query Frame = 0


Query: 6   MEPYRSHRKSPISTN--STTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGK 65
           ME  RS +++ +S +  ST TLPLY +AP +EVRLE+FEL+AIDRLRVLKG+SDGL+R +
Sbjct: 1   MEVIRSQKRT-VSNDVVSTPTLPLYLTAPHMEVRLEEFELFAIDRLRVLKGVSDGLARAR 60

Query: 66  KSEEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRH 125
              EM+ LV  L K +M+    SE++NKDIISHFVLRLVYCR+++L+KWFLSMET LFRH
Sbjct: 61  NPNEMDDLVETLWKEHMRLSNVSEMINKDIISHFVLRLVYCRSDELKKWFLSMETALFRH 120

Query: 126 RFLSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWE 185
           RF  +  E Q+ +  E GL YKA+  AE E+++++L  VAR  GQ +   + IYYKVP+E
Sbjct: 121 RFRLKKIEEQRAIVGEFGLPYKAVIGAELESLKERLGLVARSHGQISSDVENIYYKVPFE 180

Query: 186 EVPELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRL 245
           EVP+LVA RRV L KG+A++A  Q+VSLV TQFRS+LSKAL LTNRKWT+TIRE+EKDRL
Sbjct: 181 EVPDLVASRRVLLQKGFAFVAGTQLVSLVVTQFRSHLSKALILTNRKWTTTIREREKDRL 240

Query: 246 APIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGR 305
            PIVEAL TSYLGPDYSQ  EYADIS+KD+DQ++KSSFPLCMRHLFEKL+EDHHLKHGGR
Sbjct: 241 TPIVEALSTSYLGPDYSQSNEYADISLKDIDQVSKSSFPLCMRHLFEKLREDHHLKHGGR 300

Query: 306 MQLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKR 356
           MQLGLFLKGVGLKLDDALAFWR EF+++VG+ERFDKEYAY+IRHNYGKEGKR
Sbjct: 301 MQLGLFLKGVGLKLDDALAFWREEFTKKVGSERFDKEYAYAIRHNYGKEGKR 351

[Close]

BLAST of Cucsat.G6390 vs. TAIR 10
Match: AT1G67320.1 (DNA primase, large subunit family )

HSP 1 Score: 469.9 bits (1208), Expect = 1.8e-132
Identity = 238/352 (67.61%), Postives = 289/352 (82.10%), Query Frame = 0


Query: 6   MEPYRSHRKSPISTN--STTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGK 65
           ME  RS +++ +S +  ST TLPLY +AP +EVRLE+FEL+AIDRLRVLKG+SDGL+R +
Sbjct: 1   MEVIRSQKRT-VSNDVVSTPTLPLYLTAPHMEVRLEEFELFAIDRLRVLKGVSDGLARAR 60

Query: 66  KSEEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRH 125
              EM+ LV  L K +M+    SE++NKDIISHFVLRLVYCR+++L+KWFLSMET LFRH
Sbjct: 61  NPNEMDDLVETLWKEHMRLSNVSEMINKDIISHFVLRLVYCRSDELKKWFLSMETALFRH 120

Query: 126 RFLSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSSDAIYYKVPWE 185
           RF  +  E Q+ +  E GL YKA+  AE E+++++L  VAR  GQ +   + IYYKVP+E
Sbjct: 121 RFRLKKIEEQRAIVGEFGLPYKAVIGAELESLKERLGLVARSHGQISSDVENIYYKVPFE 180

Query: 186 EVPELVAGRRVFLHKGYAYIAIYQVVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRL 245
           EVP+LVA RRV L KG+A++A  Q+VSLV TQFRS+LSKAL LTNRKWT+TIRE+EKDRL
Sbjct: 181 EVPDLVASRRVLLQKGFAFVAGTQLVSLVVTQFRSHLSKALILTNRKWTTTIREREKDRL 240

Query: 246 APIVEALCTSYLGPDYSQPREYADISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGR 305
            PIVEAL TSYLGPDYSQ  EYADIS+KD+DQ++KSSFPLCMRHLFEKL+EDHHLKHGGR
Sbjct: 241 TPIVEALSTSYLGPDYSQSNEYADISLKDIDQVSKSSFPLCMRHLFEKLREDHHLKHGGR 300

Query: 306 MQLGLFLKGVGLKLDDALAFWRAEFSQRVGAERFDKEYAYSIRHNYGKEGKR 356
           MQLGLF     LKLDDALAFWR EF+++VG+ERFDKEYAY+IRHNYGKEGKR
Sbjct: 301 MQLGLF-----LKLDDALAFWREEFTKKVGSERFDKEYAYAIRHNYGKEGKR 346

[Close]

BLAST of Cucsat.G6390 vs. TAIR 10
Match: AT1G67320.3 (DNA primase, large subunit family )

HSP 1 Score: 468.4 bits (1204), Expect = 5.2e-132
Identity = 243/388 (62.63%), Postives = 294/388 (75.77%), Query Frame = 0


Query: 6   MEPYRSHRKSPISTN--STTTLPLYRSAPPLEVRLEDFELYAIDRLRVLKGISDGLSRGK 65
           ME  RS +++ +S +  ST TLPLY +AP +EVRLE+FEL+AIDRLRVLKG+SDGL+R +
Sbjct: 1   MEVIRSQKRT-VSNDVVSTPTLPLYLTAPHMEVRLEEFELFAIDRLRVLKGVSDGLARAR 60

Query: 66  KSEEMEKLVRELLKTNMKHPQASEVVNKDIISHFVLRLVYCRTEDLRKWFLSMETMLFRH 125
              EM+ LV  L K +M+    SE++NKDIISHFVLRLVYCR+++L+KWFLSMET LFRH
Sbjct: 61  NPNEMDDLVETLWKEHMRLSNVSEMINKDIISHFVLRLVYCRSDELKKWFLSMETALFRH 120

Query: 126 RFLSEGPESQKQVFAELGLSYKAISNAEFEAVRDKLVQVARLIGQPAPSS---------- 185
           RF  +  E Q+ +  E GL YKA+  AE E+++++L  VAR  GQ +             
Sbjct: 121 RFRLKKIEEQRAIVGEFGLPYKAVIGAELESLKERLGLVARSHGQISSDGTCNMLYFDPM 180

Query: 186 --------------------------DAIYYKVPWEEVPELVAGRRVFLHKGYAYIAIYQ 245
                                     + IYYKVP+EEVP+LVA RRV L KG+A++A  Q
Sbjct: 181 FTLSHLAVKLVPFLMEKFLSFLSFAVENIYYKVPFEEVPDLVASRRVLLQKGFAFVAGTQ 240

Query: 246 VVSLVATQFRSYLSKALSLTNRKWTSTIREQEKDRLAPIVEALCTSYLGPDYSQPREYAD 305
           +VSLV TQFRS+LSKAL LTNRKWT+TIRE+EKDRL PIVEAL TSYLGPDYSQ  EYAD
Sbjct: 241 LVSLVVTQFRSHLSKALILTNRKWTTTIREREKDRLTPIVEALSTSYLGPDYSQSNEYAD 300

Query: 306 ISIKDLDQIAKSSFPLCMRHLFEKLKEDHHLKHGGRMQLGLFLKGVGLKLDDALAFWRAE 356
           IS+KD+DQ++KSSFPLCMRHLFEKL+EDHHLKHGGRMQLGLFLKGVGLKLDDALAFWR E
Sbjct: 301 ISLKDIDQVSKSSFPLCMRHLFEKLREDHHLKHGGRMQLGLFLKGVGLKLDDALAFWREE 360

The following BLAST results are available for this feature:

BLAST of Cucsat.G6390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84WJ2	4.5e-136	69.03	Probable DNA primase large subunit OS=Arabidopsis thaliana OX=3702 GN=At1g67320 ...	[more]
O89044	7.3e-62	38.94	DNA primase large subunit OS=Rattus norvegicus OX=10116 GN=Prim2 PE=2 SV=1	[more]
P33610	1.2e-61	38.94	DNA primase large subunit OS=Mus musculus OX=10090 GN=Prim2 PE=1 SV=1	[more]
P49643	1.1e-60	39.05	DNA primase large subunit OS=Homo sapiens OX=9606 GN=PRIM2 PE=1 SV=2	[more]
Q9VPH2	6.8e-60	36.59	DNA primase large subunit OS=Drosophila melanogaster OX=7227 GN=Prim2 PE=1 SV=2	[more]

BLAST of Cucsat.G6390 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46457.1	8.99e-255	100.00	hypothetical protein Csa_005048 [Cucumis sativus]	[more]
XP_004140536.1	3.49e-252	100.00	probable DNA primase large subunit [Cucumis sativus]	[more]
XP_008459852.1	1.76e-245	97.72	PREDICTED: probable DNA primase large subunit [Cucumis melo]	[more]
TYK24680.1	2.60e-243	97.15	putative DNA primase large subunit [Cucumis melo var. makuwa]	[more]
KAA0039817.1	1.81e-241	96.88	putative DNA primase large subunit [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G6390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDK9	4.35e-255	100.00	DNA primase large subunit OS=Cucumis sativus OX=3659 GN=Csa_6G094750 PE=3 SV=1	[more]
A0A1S3CBL6	8.50e-246	97.72	probable DNA primase large subunit OS=Cucumis melo OX=3656 GN=LOC103498852 PE=3 ...	[more]
A0A5D3DN30	1.26e-243	97.15	DNA primase large subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7TE64	8.74e-242	96.88	DNA primase large subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A6J1H6N8	4.30e-232	92.31	probable DNA primase large subunit isoform X2 OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of Cucsat.G6390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67320.2	3.2e-137	69.03	DNA primase, large subunit family	[more]
AT1G67320.1	1.8e-132	67.61	DNA primase, large subunit family	[more]
AT1G67320.3	5.2e-132	62.63	DNA primase, large subunit family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007238	DNA primase large subunit, eukaryotic/archaeal	PFAM	PF04104	DNA_primase_lrg	coord: 184..399 e-value: 8.2E-70 score: 235.2
IPR007238	DNA primase large subunit, eukaryotic/archaeal	PANTHER	PTHR10537	DNA PRIMASE LARGE SUBUNIT	coord: 13..394
None	No IPR available	GENE3D	1.20.930.80		coord: 1..257 e-value: 1.5E-72 score: 246.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR10537:SF5	DNA PRIMASE LARGE SUBUNIT	coord: 13..394
IPR016558	DNA primase, large subunit, eukaryotic	CDD	cd07322	PriL_PriS_Eukaryotic	coord: 34..391 e-value: 1.22993E-151 score: 432.456

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G6390.T1	Cucsat.G6390.T1	mRNA
Cucsat.G6390.T10	Cucsat.G6390.T10	mRNA
Cucsat.G6390.T7	Cucsat.G6390.T7	mRNA
Cucsat.G6390.T8	Cucsat.G6390.T8	mRNA
Cucsat.G6390.T6	Cucsat.G6390.T6	mRNA
Cucsat.G6390.T5	Cucsat.G6390.T5	mRNA
Cucsat.G6390.T4	Cucsat.G6390.T4	mRNA
Cucsat.G6390.T3	Cucsat.G6390.T3	mRNA
Cucsat.G6390.T2	Cucsat.G6390.T2	mRNA
Cucsat.G6390.T9	Cucsat.G6390.T9	mRNA
Cucsat.G6390.T11	Cucsat.G6390.T11	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006269	DNA replication, synthesis of RNA primer
cellular_component	GO:0005658	alpha DNA polymerase:primase complex
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding