Cucsat.G6374 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G6374
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Light-regulated protein-like
Location	ctg1429: 413638 .. 415190 (+)
RNA-Seq Expression	Cucsat.G6374
Synteny	Cucsat.G6374

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGAGCATGGTTCAAATGAGGCAAGTTCTCAGATATTTAAGCAAATTAACAAAGATTAACGGAATCAAAGCATATCTATGGATTTTCTTCGAGAATGTTTGTGATATAAGAAATATCAAGAAATGAGGGAGAAAGAGACGAGATATAATAATGTCAATTCAAATCTACACAACCACTCGTTTCTCAAGGAGAAAAAAAGTTGCTTTCATCTCAACATTATTGATTTAAAACCTTATCCAGTCACGAGATATCTTGCCAACTTTATCTGTTTAACCTTATAAATCTGAATTCTACTCTAAAGATACATCCAAGCACCAACTTCACAGCAGACCGAACCGAACCATTGTTCATCATGCAGTTCCAGGCAGCTCTTTCCATAGCATCTCCATCATGCTCCCTCCTCCCACCAACAGCCAAATCAATGGCCTTCTCAATCCCAACGAGGTCCATGCCAAGGCAAAGCAAAGGAACCCTAAAAGCAAAGGCAAGTGCAGTAGGACAAGACCCTTCAACTGTTGACTACAGCTCCATGTCCTCGTAAGCCAAATCATTTTATATTTGGTTGTTACCCCACAATATGTCTGATTTTAAAACCTTCATTTACTCTTTTGTGTCTATTTTTGCAGTGTTTTTCCAGCAGAGGCTTGTGACACTGTTGGAGGTGAAGCTTGTGATGTGGAAATGTATCCTGAAGTAAAGCTAAAACCAGAGGCCAAAAAAGGGAATAGTGTTACAGAGCCAGTTGAGAGAGAGTATCTACAATATGACAGTCCCAAGACGTAAGATCTCAAAGCAATAAACCATAGGACCTTTCATCCTCTATTAATTCGTTTCCTATGAAACAACACTATTTCATACTTCTACATGCATTCATATTCTTGTTTTTTAATGATTGCTGCAGAGTCTTTCCAGCGGAGGCTTGTGATGATTTGGGTGGTGAATTCTGTGATCCAGAGTATCAAAAAGGAGTTTACTAGAAAAAAATCTTATTGGGAATTAGTACATATAAACAAGTGTTGAGCCTAGGGTCAACTTTCAGTTGTTTTTTAAATTTTCTTCTCTTTTGTTGACTTTCTCTTATGCCTGTAAATGATTAATAAAACTACAAAGCTCTTCAATGCTGATCAATACTCGATATTCTGAAAGAACATAAAGACCATCTCTTCTAAGAGAAATACAAGCTATGGTAATAGAACAACAGAGAGAACTTTTTTTGTGATCGTCTGGAAGGCAATAATTTTCCACAAACAAACTGCTTGTTCACTTGGTGAGAAAATAGAAAGAATTTCAAGCTGTTTCAAGATTGACATATCAAAAGCTTGATTGATTTATAATATACAGACAACAATGAATCACCCATCAAAAAAGTTATCTTATACAGAACTAAGATTAGACAATAGAGAAACTGATATCAGAAGATTGTTCTATAACAACAAATACTAATATGTCAACAGTAAAATATCACAGAAGTTTTAAAAAGAATAGATTAATAGACATACTTACAAATGAATTGCTGAAGCTGCCAAGATATTCACTGTTCCCTACTGTCTTC

Coding sequence (CDS)

ATGCAGTTCCAGGCAGCTCTTTCCATAGCATCTCCATCATGCTCCCTCCTCCCACCAACAGCCAAATCAATGGCCTTCTCAATCCCAACGAGGTCCATGCCAAGGCAAAGCAAAGGAACCCTAAAAGCAAAGGCAAGTGCAGTAGGACAAGACCCTTCAACTGTTGACTACAGCTCCATGTCCTCTGTTTTTCCAGCAGAGGCTTGTGACACTGTTGGAGGTGAAGCTTGTGATGTGGAAATGTATCCTGAAGTAAAGCTAAAACCAGAGGCCAAAAAAGGGAATAGTGTTACAGAGCCAGTTGAGAGAGAGTATCTACAATATGACAGTCCCAAGACAGTCTTTCCAGCGGAGGCTTGTGATGATTTGGGTGGTGAATTCTGTGATCCAGAGTATCAAAAAGGAGTTTACTAG

Protein sequence

MQFQAALSIASPSCSLLPPTAKSMAFSIPTRSMPRQSKGTLKAKASAVGQDPSTVDYSSMSSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTVFPAEACDDLGGEFCDPEYQKGVY

Homology

[Close]

BLAST of Cucsat.G6374 vs. ExPASy Swiss-Prot
Match: Q96500 (Light-regulated protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIR1 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.3e-24
Identity = 62/128 (48.44%), Postives = 83/128 (64.84%), Query Frame = 0


Query: 8   SIASPSCSLLPPTAKSMAFSIPTRSMPRQSKGTLKAKASAVGQDPSTVDY-SSMSSVFPA 67
           S++SP  + L P A   +     RS    S       +S++  DP+TVDY SS+ SVFPA
Sbjct: 18  SVSSPKLTFLLPHATKASRLSSLRSNNSSS-------SSSLTSDPNTVDYNSSILSVFPA 77

Query: 68  EACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTVFPAEACDDLGGE 127
           EAC+ + G AC  ++YPEVKL  +       +EPV+REY +Y+SPKTVF  EACDDLGGE
Sbjct: 78  EACEVISGYACSADIYPEVKLDTKPVSRPVASEPVDREYEEYNSPKTVFREEACDDLGGE 137

Query: 128 FCDPEYQK 135
           FC+P++QK
Sbjct: 138 FCEPDFQK 138

[Close]

BLAST of Cucsat.G6374 vs. ExPASy Swiss-Prot
Match: Q03200 (Light-regulated protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=LIR1 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.5e-23
Identity = 62/127 (48.82%), Postives = 77/127 (60.63%), Query Frame = 0


Query: 4   QAALSIASPSCSLLPPTAKSMAFSIPTRSMPRQSKGTLKAKASAVGQDPSTVDYSSMSSV 63
           Q A S      ++LP   K  +  I     PR+    ++A A+AV  + + VDYSS  SV
Sbjct: 2   QTAASSVVGLSAVLPAAVKGRSLQI---QAPRRVALRVRAAAAAVAVEAAEVDYSSNISV 61

Query: 64  FPAEACDTVGGEACDVEMYPEVKLKPEA--KKGNSVTEPVEREYLQYDSPKTVFPAEACD 123
           FP EACD +GGEAC+V+MYPE KL   A      +  E V+R+YL YD P TVFP EACD
Sbjct: 62  FPMEACDLIGGEACNVQMYPEAKLSSSAAVAVSRAAAEEVDRDYLSYDEPTTVFPEEACD 121

Query: 124 DLGGEFC 129
           DLGGEFC
Sbjct: 122 DLGGEFC 125

[Close]

BLAST of Cucsat.G6374 vs. NCBI nr
Match: NP_001267523.1 (light-regulated protein-like [Cucumis sativus] >KGN46414.1 hypothetical protein Csa_005346 [Cucumis sativus] >BAA06153.1 CR9 [Cucumis sativus] >CBZ13178.1 putative cytokinin-repressed protein [Cucumis sativus] >prf||2016504A cytokinin-repressed protein CR9 [Cucumis sativus])

HSP 1 Score: 274 bits (700), Expect = 1.14e-92
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MQFQAALSIASPSCSLLPPTAKSMAFSIPTRSMPRQSKGTLKAKASAVGQDPSTVDYSSM 60
           MQFQAALSIASPSCSLLPPTAKSMAFSIPTRSMPRQSKGTLKAKASAVGQDPSTVDYSSM
Sbjct: 1   MQFQAALSIASPSCSLLPPTAKSMAFSIPTRSMPRQSKGTLKAKASAVGQDPSTVDYSSM 60

Query: 61  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTVFPAEAC 120
           SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTVFPAEAC
Sbjct: 61  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTVFPAEAC 120

Query: 121 DDLGGEFCDPEYQKGVY 137
           DDLGGEFCDPEYQKGVY
Sbjct: 121 DDLGGEFCDPEYQKGVY 137

[Close]

BLAST of Cucsat.G6374 vs. NCBI nr
Match: KAA0039854.1 (light-regulated protein-like [Cucumis melo var. makuwa] >TYK24647.1 light-regulated protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 259 bits (663), Expect = 5.03e-87
Identity = 130/137 (94.89%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 1   MQFQAALSIASPSCSLLPPTAKSMAFSIPTRSMPRQSKGTLKAKASAVGQDPSTVDYSSM 60
           MQ QAALSIA PSCSLLPPTAK MAFSI TRS+PRQSKGTLKAKASAVGQ+PSTVDYSSM
Sbjct: 1   MQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSKGTLKAKASAVGQEPSTVDYSSM 60

Query: 61  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTVFPAEAC 120
           SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG+SVTEPVEREYLQYDSPKTVFPAEAC
Sbjct: 61  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTVFPAEAC 120

Query: 121 DDLGGEFCDPEYQKGVY 137
           DDLGGEFCDPEYQKGVY
Sbjct: 121 DDLGGEFCDPEYQKGVY 137

[Close]

BLAST of Cucsat.G6374 vs. NCBI nr
Match: XP_008459906.1 (PREDICTED: light-regulated protein-like [Cucumis melo])

HSP 1 Score: 258 bits (659), Expect = 2.05e-86
Identity = 129/137 (94.16%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 1   MQFQAALSIASPSCSLLPPTAKSMAFSIPTRSMPRQSKGTLKAKASAVGQDPSTVDYSSM 60
           MQ QAALSIA PSCSLLPPTAK MAFSI TRS+PRQS+GTLKAKASAVGQ+PSTVDYSSM
Sbjct: 1   MQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSQGTLKAKASAVGQEPSTVDYSSM 60

Query: 61  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTVFPAEAC 120
           SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG+SVTEPVEREYLQYDSPKTVFPAEAC
Sbjct: 61  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTVFPAEAC 120

Query: 121 DDLGGEFCDPEYQKGVY 137
           DDLGGEFCDPEYQKGVY
Sbjct: 121 DDLGGEFCDPEYQKGVY 137

[Close]

BLAST of Cucsat.G6374 vs. NCBI nr
Match: XP_038906788.1 (light-regulated protein, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 231 bits (588), Expect = 1.68e-75
Identity = 120/143 (83.92%), Postives = 128/143 (89.51%), Query Frame = 0


Query: 1   MQFQAALSIASPS-CSLLPPTAKSMAFSIPTRSMPRQ-----SKGTLKAKASAVGQDPST 60
           MQ QAALS+A+PS CSLLPPTAKSMAFS+ +RS+ R       +  LKAKASAVGQDPST
Sbjct: 1   MQLQAALSVATPSSCSLLPPTAKSMAFSVRSRSIGRHPTSQTQRPILKAKASAVGQDPST 60

Query: 61  VDYSSMSSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTV 120
           VDYSS+SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKK  SVTEPV+REYLQYDSPKTV
Sbjct: 61  VDYSSISSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKQGSVTEPVDREYLQYDSPKTV 120

Query: 121 FPAEACDDLGGEFCDPEYQKGVY 137
           FPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 FPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of Cucsat.G6374 vs. NCBI nr
Match: XP_022953556.1 (light-regulated protein-like [Cucurbita moschata] >KAG7014620.1 Light-regulated protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 224 bits (571), Expect = 6.54e-73
Identity = 118/143 (82.52%), Postives = 124/143 (86.71%), Query Frame = 0


Query: 1   MQFQAALSIASPS-CSLLPPTAKSMAFSIPTRSMPRQS-----KGTLKAKASAVGQDPST 60
           MQ QAA S+A PS C LLPPT K MAFSIP+RSM R       +  LKAKASAVGQDPST
Sbjct: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60

Query: 61  VDYSSMSSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTV 120
           VDYSSMSSVFPAEAC+TVGGEACDVEMYPEVKLKPEAKKG SV+E V+REYLQYDSPKTV
Sbjct: 61  VDYSSMSSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEAVDREYLQYDSPKTV 120

Query: 121 FPAEACDDLGGEFCDPEYQKGVY 137
           FPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 FPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of Cucsat.G6374 vs. ExPASy TrEMBL
Match: Q39636 (CR9 protein OS=Cucumis sativus OX=3659 GN=CR9 PE=2 SV=1)

HSP 1 Score: 274 bits (700), Expect = 5.53e-93
Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0


Query: 1   MQFQAALSIASPSCSLLPPTAKSMAFSIPTRSMPRQSKGTLKAKASAVGQDPSTVDYSSM 60
           MQFQAALSIASPSCSLLPPTAKSMAFSIPTRSMPRQSKGTLKAKASAVGQDPSTVDYSSM
Sbjct: 1   MQFQAALSIASPSCSLLPPTAKSMAFSIPTRSMPRQSKGTLKAKASAVGQDPSTVDYSSM 60

Query: 61  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTVFPAEAC 120
           SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTVFPAEAC
Sbjct: 61  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTVFPAEAC 120

Query: 121 DDLGGEFCDPEYQKGVY 137
           DDLGGEFCDPEYQKGVY
Sbjct: 121 DDLGGEFCDPEYQKGVY 137

[Close]

BLAST of Cucsat.G6374 vs. ExPASy TrEMBL
Match: A0A5D3DLY7 (Light-regulated protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001960 PE=4 SV=1)

HSP 1 Score: 259 bits (663), Expect = 2.44e-87
Identity = 130/137 (94.89%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 1   MQFQAALSIASPSCSLLPPTAKSMAFSIPTRSMPRQSKGTLKAKASAVGQDPSTVDYSSM 60
           MQ QAALSIA PSCSLLPPTAK MAFSI TRS+PRQSKGTLKAKASAVGQ+PSTVDYSSM
Sbjct: 1   MQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSKGTLKAKASAVGQEPSTVDYSSM 60

Query: 61  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTVFPAEAC 120
           SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG+SVTEPVEREYLQYDSPKTVFPAEAC
Sbjct: 61  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTVFPAEAC 120

Query: 121 DDLGGEFCDPEYQKGVY 137
           DDLGGEFCDPEYQKGVY
Sbjct: 121 DDLGGEFCDPEYQKGVY 137

[Close]

BLAST of Cucsat.G6374 vs. ExPASy TrEMBL
Match: A0A1S3CBQ8 (light-regulated protein-like OS=Cucumis melo OX=3656 GN=LOC103498886 PE=4 SV=1)

HSP 1 Score: 258 bits (659), Expect = 9.92e-87
Identity = 129/137 (94.16%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 1   MQFQAALSIASPSCSLLPPTAKSMAFSIPTRSMPRQSKGTLKAKASAVGQDPSTVDYSSM 60
           MQ QAALSIA PSCSLLPPTAK MAFSI TRS+PRQS+GTLKAKASAVGQ+PSTVDYSSM
Sbjct: 1   MQLQAALSIAPPSCSLLPPTAKLMAFSIQTRSLPRQSQGTLKAKASAVGQEPSTVDYSSM 60

Query: 61  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTVFPAEAC 120
           SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKG+SVTEPVEREYLQYDSPKTVFPAEAC
Sbjct: 61  SSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGSSVTEPVEREYLQYDSPKTVFPAEAC 120

Query: 121 DDLGGEFCDPEYQKGVY 137
           DDLGGEFCDPEYQKGVY
Sbjct: 121 DDLGGEFCDPEYQKGVY 137

[Close]

BLAST of Cucsat.G6374 vs. ExPASy TrEMBL
Match: A0A6J1GNA5 (light-regulated protein-like OS=Cucurbita moschata OX=3662 GN=LOC111456061 PE=4 SV=1)

HSP 1 Score: 224 bits (571), Expect = 3.17e-73
Identity = 118/143 (82.52%), Postives = 124/143 (86.71%), Query Frame = 0


Query: 1   MQFQAALSIASPS-CSLLPPTAKSMAFSIPTRSMPRQS-----KGTLKAKASAVGQDPST 60
           MQ QAA S+A PS C LLPPT K MAFSIP+RSM R       +  LKAKASAVGQDPST
Sbjct: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSIPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60

Query: 61  VDYSSMSSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTV 120
           VDYSSMSSVFPAEAC+TVGGEACDVEMYPEVKLKPEAKKG SV+E V+REYLQYDSPKTV
Sbjct: 61  VDYSSMSSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEAVDREYLQYDSPKTV 120

Query: 121 FPAEACDDLGGEFCDPEYQKGVY 137
           FPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 FPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of Cucsat.G6374 vs. ExPASy TrEMBL
Match: A0A6J1JSC1 (light-regulated protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111488476 PE=4 SV=1)

HSP 1 Score: 222 bits (566), Expect = 1.83e-72
Identity = 116/143 (81.12%), Postives = 124/143 (86.71%), Query Frame = 0


Query: 1   MQFQAALSIASPS-CSLLPPTAKSMAFSIPTRSMPRQS-----KGTLKAKASAVGQDPST 60
           MQ QAA S+A PS C LLPPT K MAFS+P+RSM R       +  LKAKASAVGQDPST
Sbjct: 1   MQLQAAPSLAHPSSCYLLPPTTKLMAFSVPSRSMRRHPTSQTHRPILKAKASAVGQDPST 60

Query: 61  VDYSSMSSVFPAEACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTV 120
           VDYSS+SSVFPAEAC+TVGGEACDVEMYPEVKLKPEAKKG SV+E V+REYLQYDSPKTV
Sbjct: 61  VDYSSVSSVFPAEACETVGGEACDVEMYPEVKLKPEAKKGGSVSEAVDREYLQYDSPKTV 120

Query: 121 FPAEACDDLGGEFCDPEYQKGVY 137
           FPAEACDDLGGEFCDPEYQKGVY
Sbjct: 121 FPAEACDDLGGEFCDPEYQKGVY 143

[Close]

BLAST of Cucsat.G6374 vs. TAIR 10
Match: AT3G26740.1 (CCR-like )

HSP 1 Score: 113.2 bits (282), Expect = 1.6e-25
Identity = 62/128 (48.44%), Postives = 83/128 (64.84%), Query Frame = 0


Query: 8   SIASPSCSLLPPTAKSMAFSIPTRSMPRQSKGTLKAKASAVGQDPSTVDY-SSMSSVFPA 67
           S++SP  + L P A   +     RS    S       +S++  DP+TVDY SS+ SVFPA
Sbjct: 18  SVSSPKLTFLLPHATKASRLSSLRSNNSSS-------SSSLTSDPNTVDYNSSILSVFPA 77

Query: 68  EACDTVGGEACDVEMYPEVKLKPEAKKGNSVTEPVEREYLQYDSPKTVFPAEACDDLGGE 127
           EAC+ + G AC  ++YPEVKL  +       +EPV+REY +Y+SPKTVF  EACDDLGGE
Sbjct: 78  EACEVISGYACSADIYPEVKLDTKPVSRPVASEPVDREYEEYNSPKTVFREEACDDLGGE 137

Query: 128 FCDPEYQK 135
           FC+P++QK
Sbjct: 138 FCEPDFQK 138

The following BLAST results are available for this feature:

BLAST of Cucsat.G6374 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96500	2.3e-24	48.44	Light-regulated protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIR1...	[more]
Q03200	1.5e-23	48.82	Light-regulated protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of Cucsat.G6374 vs. NCBI nr


Match Name	E-value	Identity	Description
NP_001267523.1	1.14e-92	100.00	light-regulated protein-like [Cucumis sativus] >KGN46414.1 hypothetical protein ...	[more]
KAA0039854.1	5.03e-87	94.89	light-regulated protein-like [Cucumis melo var. makuwa] >TYK24647.1 light-regula...	[more]
XP_008459906.1	2.05e-86	94.16	PREDICTED: light-regulated protein-like [Cucumis melo]	[more]
XP_038906788.1	1.68e-75	83.92	light-regulated protein, chloroplastic-like [Benincasa hispida]	[more]
XP_022953556.1	6.54e-73	82.52	light-regulated protein-like [Cucurbita moschata] >KAG7014620.1 Light-regulated ...	[more]

BLAST of Cucsat.G6374 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q39636	5.53e-93	100.00	CR9 protein OS=Cucumis sativus OX=3659 GN=CR9 PE=2 SV=1	[more]
A0A5D3DLY7	2.44e-87	94.89	Light-regulated protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3CBQ8	9.92e-87	94.16	light-regulated protein-like OS=Cucumis melo OX=3656 GN=LOC103498886 PE=4 SV=1	[more]
A0A6J1GNA5	3.17e-73	82.52	light-regulated protein-like OS=Cucurbita moschata OX=3662 GN=LOC111456061 PE=4 ...	[more]
A0A6J1JSC1	1.83e-72	81.12	light-regulated protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of Cucsat.G6374 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G26740.1	1.6e-25	48.44	CCR-like	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009856	Light regulated Lir1	PFAM	PF07207	Lir1	coord: 4..113 e-value: 3.5E-34 score: 117.9
IPR009856	Light regulated Lir1	PANTHER	PTHR36762	LIGHT-REGULATED PROTEIN 1, CHLOROPLASTIC	coord: 4..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 31..56
None	No IPR available	PANTHER	PTHR36762:SF4	LIGHT-REGULATED PROTEIN-LIKE	coord: 4..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G6374.T1	Cucsat.G6374.T1	mRNA
Cucsat.G6374.T3	Cucsat.G6374.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009507	chloroplast