Cucsat.G627 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AACATCGTCACTCTCGTTCTCCTTCTTTCAGAGGCAGCTGAATACGCAATTGTTGAGATCTCCTTCGCACCCGCCGTCTCAGGTTTCTCTCTTTTTCTTATCTCCATTGTTTATTGTTTCTTGTATTTTGGACTTCTTATGACCATAAACACTTCCTGTGGTTGAGTTTCGTTTTGTCAATATTGAAAACATTGTTGGGTTGGTTCAACAGATTCATTTTGGAAACAGGAAAGTATGGCGTACGCAGCAATGAAACCAACTAAGCCAGGCTTAGAAGACACGCAAGAGCAAATCCATAAGATCAGGATTACACTCTCCTCCAAAAATGTCAAGAACCTCGAGAAAGGTATTCATTCTTACATGTTGGATTATTGTTGTTGTTGTTTTCTTCTTCTTTTGTAATTTAGTGAATATGGGACTCAAATGAGACTGCGTTTTCGTTTCTTTAGTTAGTTAACTTTCATGTCACTAGTAGAGGATGATTGGTTGGTAATTTTCTTACAATGCTCTGATTATGAATACGATATGATGTTGTAAATACGTGAACAAATTATAGGGATAGTATTGTTGGATAGAATGGTTGAAGGATCCCTATTATGTGCCTAATGACCAATGTGAGTCTAGGGGTTGTTAAATTACTTCTTAAGATTGTAGTCTGTTTTGGTGGATGTCAGCATTGTTAATCCTCACTCCATTGATTTCAACTGCATAGTTGGATTATCATATAATTGGGTTTTTATTTTTCAAAGTTGTCCAATTCAATTAGTTTGTTGGTTTGATGTCATTTTTAATCAATAGTCTGCGCGGATTTGGTTCGTGGTGCGAAGGACAAGAGGTTGAGGGTGAAGGGACCAGTGAGAATGCCCACTAAAGTTCTTCTCATCACAACCAGAAAATCTCCATGTGGTGAAGGTACTTTATTTTCCACTTATCTGTGAACTTCTGAGTTTAAGTTCATTTTTCTCCTGGATTTGAGACTAATATATGTACATATCCCTTCGTGGCGGTTCATTGCATTTGGAACTCATTTCTTGTGAAGTCATTTGAATATTTGCTATCAAATTTGGAGAGGGGTGGATTCTTTTGGTTTTTATAGATATGAATCCGATGTTGAAAAATCATCAAAGGTCAATTCTTAGTGAAACTATTTCTTTGTTCGGTTCTTTATTGTAGGTACCAACACATGGGACAGATTTGAACTTCGTGTCCACAAGCGGGTTATCGACCTTTTCAGCTCTGCTGATGTAGTGAAGCAGATTACCTCCATCACCATTGAACCTGGGGTGGAGGTTGAGGTCACCATCGCCGATCAATGAGTGCACTCTTTTCATGTTTAGACTATTTTTAGTCTCATTAGACAGTTGTTACTTTTTGGGTTTGGAGCATACCTGTCAGGGTCATTGGGGTTTAAATGCAATAGTTGTTCCCATTATATGTTGAAATTAAAGACATTGATAGAGTTTCAATTCCTGGCAAATTTTTCTTGCTTTAGAACTAATGTTAATTTTGGCTATCTATGCAGATTTTGTATCTATAGCTGTGAATTCTCTTAATTGAGATTTAAATGTGCAGTGCTTGAATATCCATATCACGGTTCTTTAAATTCCAATCACATACTTGAATAAATAAGAACAT ATGGCGTACGCAGCAATGAAACCAACTAAGCCAGGCTTAGAAGACACGCAAGAGCAAATCCATAAGATCAGGATTACACTCTCCTCCAAAAATGTCAAGAACCTCGAGAAAGTCTGCGCGGATTTGGTTCGTGGTGCGAAGGACAAGAGGTTGAGGGTGAAGGGACCAGTGAGAATGCCCACTAAAGTTCTTCTCATCACAACCAGAAAATCTCCATGTGGTGAAGGTACCAACACATGGGACAGATTTGAACTTCGTGTCCACAAGCGGGTTATCGACCTTTTCAGCTCTGCTGATGTAGTGAAGCAGATTACCTCCATCACCATTGAACCTGGGGTGGAGGTTGAGGTCACCATCGCCGATCAATGA MAYAAMKPTKPGLEDTQEQIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLLITTRKSPCGEGTNTWDRFELRVHKRVIDLFSSADVVKQITSITIEPGVEVEVTIADQ Homology
BLAST of Cucsat.G627 vs. ExPASy Swiss-Prot
Match: Q9STY6 (40S ribosomal protein S20-2 OS=Arabidopsis thaliana OX=3702 GN=RPS20B PE=2 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 1.0e-55 Identity = 111/121 (91.74%), Postives = 112/121 (92.56%), Query Frame = 0
BLAST of Cucsat.G627 vs. ExPASy Swiss-Prot
Match: P49200 (40S ribosomal protein S20-1 OS=Arabidopsis thaliana OX=3702 GN=RPS20A PE=2 SV=2) HSP 1 Score: 214.2 bits (544), Expect = 8.5e-55 Identity = 109/120 (90.83%), Postives = 111/120 (92.50%), Query Frame = 0
BLAST of Cucsat.G627 vs. ExPASy Swiss-Prot
Match: P35686 (40S ribosomal protein S20 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS20 PE=2 SV=2) HSP 1 Score: 196.1 bits (497), Expect = 2.4e-49 Identity = 102/123 (82.93%), Postives = 110/123 (89.43%), Query Frame = 0
BLAST of Cucsat.G627 vs. ExPASy Swiss-Prot
Match: P23403 (40S ribosomal protein S20 OS=Xenopus laevis OX=8355 GN=rps20 PE=1 SV=1) HSP 1 Score: 170.6 bits (431), Expect = 1.1e-41 Identity = 80/107 (74.77%), Postives = 98/107 (91.59%), Query Frame = 0
BLAST of Cucsat.G627 vs. ExPASy Swiss-Prot
Match: Q3ZBH8 (40S ribosomal protein S20 OS=Bos taurus OX=9913 GN=RPS20 PE=3 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 1.8e-41 Identity = 82/117 (70.09%), Postives = 101/117 (86.32%), Query Frame = 0
BLAST of Cucsat.G627 vs. NCBI nr
Match: XP_004148131.3 (40S ribosomal protein S20-2 [Cucumis sativus] >XP_031739457.1 40S ribosomal protein S20-2 [Cucumis sativus] >KAE8650433.1 hypothetical protein Csa_010260 [Cucumis sativus]) HSP 1 Score: 238 bits (606), Expect = 8.14e-79 Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0
BLAST of Cucsat.G627 vs. NCBI nr
Match: XP_008439109.1 (PREDICTED: 40S ribosomal protein S20-2-like [Cucumis melo] >XP_022941728.1 40S ribosomal protein S20-2-like [Cucurbita moschata] >XP_022973095.1 40S ribosomal protein S20-2-like [Cucurbita maxima] >XP_023516475.1 40S ribosomal protein S20-2-like [Cucurbita pepo subsp. pepo] >XP_038878364.1 40S ribosomal protein S20-2-like [Benincasa hispida] >XP_038878373.1 40S ribosomal protein S20-2-like [Benincasa hispida] >XP_038878380.1 40S ribosomal protein S20-2-like [Benincasa hispida] >XP_038878389.1 40S ribosomal protein S20-2-like [Benincasa hispida] >KAA0067687.1 40S ribosomal protein S20-2-like [Cucumis melo var. makuwa] >KAG7030825.1 40S ribosomal protein S20-2 [Cucurbita argyrosperma subsp. argyrosperma] >TYK23691.1 40S ribosomal protein S20-2-like [Cucumis melo var. makuwa]) HSP 1 Score: 235 bits (599), Expect = 9.52e-78 Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0
BLAST of Cucsat.G627 vs. NCBI nr
Match: XP_022985516.1 (40S ribosomal protein S20-2-like [Cucurbita maxima] >XP_023551840.1 40S ribosomal protein S20-2-like [Cucurbita pepo subsp. pepo] >KAG7014816.1 40S ribosomal protein S20-2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 232 bits (591), Expect = 1.58e-76 Identity = 120/122 (98.36%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of Cucsat.G627 vs. NCBI nr
Match: XP_024198508.1 (40S ribosomal protein S20-2 [Rosa chinensis] >PRQ59871.1 putative ribosomal protein S10 [Rosa chinensis]) HSP 1 Score: 231 bits (590), Expect = 2.25e-76 Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of Cucsat.G627 vs. NCBI nr
Match: XP_008467267.1 (PREDICTED: 40S ribosomal protein S20-2 [Cucumis melo] >XP_016903425.1 PREDICTED: 40S ribosomal protein S20-2 [Cucumis melo] >XP_038906766.1 40S ribosomal protein S20-2 [Benincasa hispida] >XP_038906767.1 40S ribosomal protein S20-2 [Benincasa hispida] >KAA0055131.1 40S ribosomal protein S20-2 [Cucumis melo var. makuwa] >TYK20728.1 40S ribosomal protein S20-2 [Cucumis melo var. makuwa]) HSP 1 Score: 231 bits (589), Expect = 3.09e-76 Identity = 119/121 (98.35%), Postives = 119/121 (98.35%), Query Frame = 0
BLAST of Cucsat.G627 vs. ExPASy TrEMBL
Match: A0A5A7VKH9 (40S ribosomal protein S20-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00570 PE=3 SV=1) HSP 1 Score: 235 bits (599), Expect = 4.61e-78 Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0
BLAST of Cucsat.G627 vs. ExPASy TrEMBL
Match: A0A6J1IAH1 (40S ribosomal protein S20-2-like OS=Cucurbita maxima OX=3661 GN=LOC111471601 PE=3 SV=1) HSP 1 Score: 235 bits (599), Expect = 4.61e-78 Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0
BLAST of Cucsat.G627 vs. ExPASy TrEMBL
Match: A0A6J1FSX5 (40S ribosomal protein S20-2-like OS=Cucurbita moschata OX=3662 GN=LOC111447005 PE=3 SV=1) HSP 1 Score: 235 bits (599), Expect = 4.61e-78 Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0
BLAST of Cucsat.G627 vs. ExPASy TrEMBL
Match: A0A1S3AXJ9 (40S ribosomal protein S20-2-like OS=Cucumis melo OX=3656 GN=LOC103483999 PE=3 SV=1) HSP 1 Score: 235 bits (599), Expect = 4.61e-78 Identity = 121/122 (99.18%), Postives = 121/122 (99.18%), Query Frame = 0
BLAST of Cucsat.G627 vs. ExPASy TrEMBL
Match: A0A0A0L681 (Ribosomal_S10 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G176340 PE=3 SV=1) HSP 1 Score: 233 bits (594), Expect = 2.67e-77 Identity = 119/122 (97.54%), Postives = 120/122 (98.36%), Query Frame = 0
BLAST of Cucsat.G627 vs. TAIR 10
Match: AT3G47370.2 (Ribosomal protein S10p/S20e family protein ) HSP 1 Score: 217.2 bits (552), Expect = 7.1e-57 Identity = 111/121 (91.74%), Postives = 112/121 (92.56%), Query Frame = 0
BLAST of Cucsat.G627 vs. TAIR 10
Match: AT3G47370.1 (Ribosomal protein S10p/S20e family protein ) HSP 1 Score: 217.2 bits (552), Expect = 7.1e-57 Identity = 111/121 (91.74%), Postives = 112/121 (92.56%), Query Frame = 0
BLAST of Cucsat.G627 vs. TAIR 10
Match: AT3G47370.3 (Ribosomal protein S10p/S20e family protein ) HSP 1 Score: 217.2 bits (552), Expect = 7.1e-57 Identity = 111/121 (91.74%), Postives = 112/121 (92.56%), Query Frame = 0
BLAST of Cucsat.G627 vs. TAIR 10
Match: AT3G45030.1 (Ribosomal protein S10p/S20e family protein ) HSP 1 Score: 214.2 bits (544), Expect = 6.0e-56 Identity = 109/120 (90.83%), Postives = 111/120 (92.50%), Query Frame = 0
BLAST of Cucsat.G627 vs. TAIR 10
Match: AT5G62300.1 (Ribosomal protein S10p/S20e family protein ) HSP 1 Score: 214.2 bits (544), Expect = 6.0e-56 Identity = 109/120 (90.83%), Postives = 111/120 (92.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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