Cucsat.G6080 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTATTATGATATTGAAAACAGACAGAATTCTAAATTAAGAGCCGTAGGACTTTAAACTTCTCTTCTACTTACATAAACTGTTTCTTTTCACAATTTCTCTTATAGAAAAATTTCACTTCTCTTAGTTATGTTCAATCTTACCTCTTCCTTATTCCCTACTTTCTTCCATAGGAATATTTCCTCAAAACCTTTCTTCCAAAAATCCCTAAACAACCAAAAGTTACCATCTTTCACCACTTTTAACCACTTCCAGCTCCTCTTCAACCTCCTCGACTACGATGGTGACGGCAAGATCTCGACGAAAGAGCTCAGTCAATTTCTCTATCGTCTAGGATATAAAAAGCTGAAAGCTACAATGGAAGCTGAAGAAATGGTGAAGGAAATGGATTCAGACCGTGATGGATTCATTGAAATGGATGAATTTTTAGAGTGAGTATGACTTACATATTAGTTTAAGCACTTTTTATAAAACGTGCTTCAACTTTTGATCTAAAATAGACCATTTAAATACTACTTTGATTTCATTTTAATCTTTATACTTTCAAATTTGGTTTATATTTTTCCTTTATTTATTTTGACTGTACTTGTATATTTTGGAAAATTTAAAAGAGACGACTGGGTTAGGCGTAACGGATGGTAAACACATTCTTAGCTTTTAATTTTGATGACGAAACGTTTTAATATAGGGTTTTGCAGAAGGGGGAGGAAGAAGAAGAAATTCTTAGGGAAGCTTTTCTGATATTTGATGGTGATAAGAATGGATTGATTTGTGCTGAGAAGTTAAAGAGAACATTGAGCAAATTTGGATGGCAAAAATGTGACCTCAAACAATGTAAAAAGATGATTGAAGGAGTTGATCATGATGGCGATGGCTATGTGAATTTTCAAGACTTTCGGCTCATGATGACACAGAAAAGATAATCATATATATAATATAGAGATTATTATCTGTAATTTTATATTTGATTTATCTCTAAGAAATGTAATGTCGTCTTTAATTAATGCTTATGATTATGACTTGTAATAATATATCTTCTTTTTCTTTTCTTTTTTTAAAAATTGTAATGGGTTTGAATTTTTCAATTGATTAAATTACAAAATTTATTCATGTTACAAAGTACGTATTTGTACTTGGCAACATTTTTAATTCAGTCTTTAGAATTTTGGGTTTT ATGTTCAATCTTACCTCTTCCTTATTCCCTACTTTCTTCCATAGGAATATTTCCTCAAAACCTTTCTTCCAAAAATCCCTAAACAACCAAAAGTTACCATCTTTCACCACTTTTAACCACTTCCAGCTCCTCTTCAACCTCCTCGACTACGATGGTGACGGCAAGATCTCGACGAAAGAGCTCAGTCAATTTCTCTATCGTCTAGGATATAAAAAGCTGAAAGCTACAATGGAAGCTGAAGAAATGGTGAAGGAAATGGATTCAGACCGTGATGGATTCATTGAAATGGATGAATTTTTAGAGGTTTTGCAGAAGGGGGAGGAAGAAGAAGAAATTCTTAGGGAAGCTTTTCTGATATTTGATGGTGATAAGAATGGATTGATTTGTGCTGAGAAGTTAAAGAGAACATTGAGCAAATTTGGATGGCAAAAATGTGACCTCAAACAATGTAAAAAGATGATTGAAGGAGTTGATCATGATGGCGATGGCTATGTGAATTTTCAAGACTTTCGGCTCATGATGACACAGAAAAGATAA MFNLTSSLFPTFFHRNISSKPFFQKSLNNQKLPSFTTFNHFQLLFNLLDYDGDGKISTKELSQFLYRLGYKKLKATMEAEEMVKEMDSDRDGFIEMDEFLEVLQKGEEEEEILREAFLIFDGDKNGLICAEKLKRTLSKFGWQKCDLKQCKKMIEGVDHDGDGYVNFQDFRLMMTQKR Homology
BLAST of Cucsat.G6080 vs. ExPASy Swiss-Prot
Match: P02595 (Calmodulin OS=Patinopecten sp. OX=6574 PE=1 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 9.0e-06 Identity = 29/68 (42.65%), Postives = 41/68 (60.29%), Query Frame = 0
BLAST of Cucsat.G6080 vs. ExPASy Swiss-Prot
Match: P11121 (Calmodulin OS=Pyuridae sp. OX=7734 PE=1 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 9.0e-06 Identity = 29/68 (42.65%), Postives = 41/68 (60.29%), Query Frame = 0
BLAST of Cucsat.G6080 vs. ExPASy Swiss-Prot
Match: P62184 (Calmodulin OS=Renilla reniformis OX=6136 PE=1 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 9.0e-06 Identity = 29/68 (42.65%), Postives = 41/68 (60.29%), Query Frame = 0
BLAST of Cucsat.G6080 vs. ExPASy Swiss-Prot
Match: P02594 (Calmodulin OS=Electrophorus electricus OX=8005 GN=calm PE=2 SV=2) HSP 1 Score: 50.4 bits (119), Expect = 1.5e-05 Identity = 29/68 (42.65%), Postives = 41/68 (60.29%), Query Frame = 0
BLAST of Cucsat.G6080 vs. ExPASy Swiss-Prot
Match: A8I1Q0 (Calmodulin OS=Heterocapsa triquetra OX=66468 PE=2 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 1.5e-05 Identity = 29/68 (42.65%), Postives = 41/68 (60.29%), Query Frame = 0
BLAST of Cucsat.G6080 vs. NCBI nr
Match: XP_004153117.1 (calmodulin-beta [Cucumis sativus] >KGN46235.1 hypothetical protein Csa_005220 [Cucumis sativus]) HSP 1 Score: 196 bits (499), Expect = 7.81e-62 Identity = 103/117 (88.03%), Postives = 109/117 (93.16%), Query Frame = 0
BLAST of Cucsat.G6080 vs. NCBI nr
Match: KAA0040005.1 (calmodulin-like protein 7 [Cucumis melo var. makuwa]) HSP 1 Score: 184 bits (468), Expect = 3.47e-58 Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0
BLAST of Cucsat.G6080 vs. NCBI nr
Match: XP_008460131.1 (PREDICTED: calmodulin-like protein 7 [Cucumis melo]) HSP 1 Score: 186 bits (473), Expect = 7.06e-58 Identity = 98/117 (83.76%), Postives = 106/117 (90.60%), Query Frame = 0
BLAST of Cucsat.G6080 vs. NCBI nr
Match: EEF50402.1 (calmodulin, putative [Ricinus communis]) HSP 1 Score: 72.8 bits (177), Expect = 4.40e-13 Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 0
BLAST of Cucsat.G6080 vs. NCBI nr
Match: XP_002511733.2 (probable calcium-binding protein CML18 [Ricinus communis]) HSP 1 Score: 72.8 bits (177), Expect = 6.43e-13 Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 0
BLAST of Cucsat.G6080 vs. ExPASy TrEMBL
Match: A0A0A0K8Z4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G076830 PE=4 SV=1) HSP 1 Score: 196 bits (499), Expect = 3.78e-62 Identity = 103/117 (88.03%), Postives = 109/117 (93.16%), Query Frame = 0
BLAST of Cucsat.G6080 vs. ExPASy TrEMBL
Match: A0A5A7TEW8 (Calmodulin-like protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002880 PE=4 SV=1) HSP 1 Score: 184 bits (468), Expect = 1.68e-58 Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0
BLAST of Cucsat.G6080 vs. ExPASy TrEMBL
Match: A0A1S3CBX8 (calmodulin-like protein 7 OS=Cucumis melo OX=3656 GN=LOC103499032 PE=4 SV=1) HSP 1 Score: 186 bits (473), Expect = 3.42e-58 Identity = 98/117 (83.76%), Postives = 106/117 (90.60%), Query Frame = 0
BLAST of Cucsat.G6080 vs. ExPASy TrEMBL
Match: B9RDE4 (Calmodulin, putative OS=Ricinus communis OX=3988 GN=RCOM_1612330 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 2.13e-13 Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 0
BLAST of Cucsat.G6080 vs. ExPASy TrEMBL
Match: A0A2P5B057 (Parvalbumin OS=Trema orientale OX=63057 GN=TorRG33x02_336390 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 5.15e-13 Identity = 36/63 (57.14%), Postives = 47/63 (74.60%), Query Frame = 0
BLAST of Cucsat.G6080 vs. TAIR 10
Match: AT1G66410.1 (calmodulin 4 ) HSP 1 Score: 50.1 bits (118), Expect = 1.4e-06 Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
BLAST of Cucsat.G6080 vs. TAIR 10
Match: AT5G37780.1 (calmodulin 1 ) HSP 1 Score: 50.1 bits (118), Expect = 1.4e-06 Identity = 29/70 (41.43%), Postives = 42/70 (60.00%), Query Frame = 0
BLAST of Cucsat.G6080 vs. TAIR 10
Match: AT5G17470.1 (EF hand calcium-binding protein family ) HSP 1 Score: 49.3 bits (116), Expect = 2.4e-06 Identity = 27/55 (49.09%), Postives = 35/55 (63.64%), Query Frame = 0
BLAST of Cucsat.G6080 vs. TAIR 10
Match: AT2G41110.1 (calmodulin 2 ) HSP 1 Score: 48.9 bits (115), Expect = 3.2e-06 Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0
BLAST of Cucsat.G6080 vs. TAIR 10
Match: AT2G27030.1 (calmodulin 5 ) HSP 1 Score: 48.9 bits (115), Expect = 3.2e-06 Identity = 28/70 (40.00%), Postives = 42/70 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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