Cucsat.G6044 (gene) Cucumber (B10) v3

Overview
NameCucsat.G6044
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionProtein ROOT PRIMORDIUM DEFECTIVE 1
Locationctg1425: 1359641 .. 1361825 (-)
RNA-Seq ExpressionCucsat.G6044
SyntenyCucsat.G6044
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATATTGTTTTTTTTTTCTTTTTATCGAACCCTCCCAGTCCCAACTCCAATCGGGAACTCACGACTCACGAGATAGCCTCCCCTCCACCCCCCTCTACAGTCCTCACGCACGCCACTCTCACTCTATCTATCACTCTGCCCCTCTCGTCCGGTCACCGGCCTGCCTCCATTGAAGCTTCCATTCGCCGTCCGCCGTTTGAAATCTCTGCCGTTTTCTTATGCTTTGTGTAACTTCTTGTGTTTTCAATAAAACTATTTTTACTCTTTGAGCATATTTAAGATTTTATCTTCTCTAATTCAAATGAACTCAATTGGATTAAGTAGAGTTGTTACCTGGTGTTTAATTTGAGAAATTGGATCAAATGAGTTAAATGCTTAGATTAAGATCATCAAATCTTCAAATTTCTTCTTTTTTTTTTTTTAATTAGGTCGATCTTACCCAAATAATTTTGGAGCTTAGTTACAGTTGGTTTTAGAATTCGAAAAGGAAGGGGTAGAAAAAGAAGATAGAAAAACTCTATCAAATGGTCGCTTAACTTAGGCATTTGTATGGTTTGCTTCCAGGATCACCTTTGTGGCACGACCTGTCATTGAATTTTATGGTGGACTTGATCCCAAACCATTTAACTTTGCCATTTTCATGGCTAGATGACTAAGACCGATTCCGGTCATCTCTTTAAATTTTAATTGCTTTCGTGGAATTGGTTCTTCCTCTTTCATTTATATTCTTTTGATTTGTCTTTGTTCATTTTAATCGTCTTCCCCCAGGCAGGCTTGTCTCTACAACCAGAGTGTATGATGGTATTCTAACCATAGGAAAAGATGTTGTATAAAGTACTGCAGAAGTCCAGGTATTGGGATCCTGGGCTCTCTTCTCCTTGTCCCCTCAAATACGTCCTTAGGAACTTTTCTTTATGGTCAATGAAGAAAGATCCTGACCTTGAATCAGCTCTATCTCGTAATCGTCGATGGATTGCCAATAACCAAATCAAGAATATCATCCTTCGTTGCCCCGATCAGGCAGCACCTGTTAAATTTCTCCAAAAGAAGTTTAAAACCCTCGACCTTCAAGGAAAAGCCCTTAACTGGCTGAAAAAGTACCCTTGCTGCTTTGAAGTTTATCTCGACAATGACGAGCACTACTTCCGGCTGACAAAGAGGATGATGGCTTTGGTTGAAGAGGAAGAAGTTGTCAAAGATATGCAGGAGCCTGCTATTGTCAAGCGTTTGACAAAATTGCTGATGATGGCTTCGAATCAGAGACTAAATGTCGTGAAACTCAGCGAATTAAGGCGGAATTTTGGGCTCCCGGATGACTTCTTGATAAGAATCATTCCCAAACATTCAGATATGTTTCGGATTGTAAATTATACTGGAAAAAAGAACTCAATGGAAATAGAACTCATATCTTGGAAACCAGAACTAGCAATTTCCAGCATAGAATCTTCAGCTTGCAAGCATGGGGTTGAGCCAGCTTTCTCATGCTCACTGCCAACAACTTGGGTAAATTCATGGGAAAAGTTCAATGAATTTAATGCCTCTCCATATGTTTCACCATATGTAAACCCTGCAGGCTTGGTGCAAGGTACCAGAGAGATGGAAAAGAGGACAGTGGGGTTAATTCATGAGATATTGTCATTGACATTATGGAAGAAAGCATCAATTATAAAGCTTGGACATTTCACCAAGGAATTTGGTCTGCCATTGAAGCTGAATGCATTACTGCTTAAGCACCCTGGCATATTCTATGTCTCAAACAAGTATCAGATCTACACTGTTGTACTTAGAGAAGGTTATAATGGATCAGAACTGATTGAGAAAGATCCATTAGTGGTTGTTAAAGAGAAGTTTGGAGAATTGATGCAGGAGGGACTTCATGAATATAACAAGAGACATCATTTGATGAATTTAGAAAAGAAAAGAATGAAGGGAATGCTTTTGGGCAGGTCAGAGAAGAACAAGAGGAAAGATTTTGAAACAGATGATTCTAATGGTCAAGGAAATAATCTAGGAGGTTTACTTGAGCCAGAGGAAAGGAAAAGATTCTATCAGTCTCTCTTTGATGATGATCCTACATGACTGATAGGTAGGTACTCGCTGGAACTTCTAGGCTTAATTTTCTGTAATCACGTTCATAGTACCTCACCTCATTTCACTGTTTGTTTCGTGCTTGGAAGTTAAAACCATTTGTGTCACACTTTTAAATGATATTCTCATATCATTAAAATTGGTATCACATGTGCATTCTTTCTTTTTTCTCTTTTTTTTTTCATTAAAAGCTCAATTTCTGATCACAAGTAAAAATGCAAAGGTGAATATGTTAATTG

Coding sequence (CDS)

ATGTTGTATAAAGTACTGCAGAAGTCCAGGTATTGGGATCCTGGGCTCTCTTCTCCTTGTCCCCTCAAATACGTCCTTAGGAACTTTTCTTTATGGTCAATGAAGAAAGATCCTGACCTTGAATCAGCTCTATCTCGTAATCGTCGATGGATTGCCAATAACCAAATCAAGAATATCATCCTTCGTTGCCCCGATCAGGCAGCACCTGTTAAATTTCTCCAAAAGAAGTTTAAAACCCTCGACCTTCAAGGAAAAGCCCTTAACTGGCTGAAAAAGTACCCTTGCTGCTTTGAAGTTTATCTCGACAATGACGAGCACTACTTCCGGCTGACAAAGAGGATGATGGCTTTGGTTGAAGAGGAAGAAGTTGTCAAAGATATGCAGGAGCCTGCTATTGTCAAGCGTTTGACAAAATTGCTGATGATGGCTTCGAATCAGAGACTAAATGTCGTGAAACTCAGCGAATTAAGGCGGAATTTTGGGCTCCCGGATGACTTCTTGATAAGAATCATTCCCAAACATTCAGATATGTTTCGGATTGTAAATTATACTGGAAAAAAGAACTCAATGGAAATAGAACTCATATCTTGGAAACCAGAACTAGCAATTTCCAGCATAGAATCTTCAGCTTGCAAGCATGGGGTTGAGCCAGCTTTCTCATGCTCACTGCCAACAACTTGGGTAAATTCATGGGAAAAGTTCAATGAATTTAATGCCTCTCCATATGTTTCACCATATGTAAACCCTGCAGGCTTGGTGCAAGGTACCAGAGAGATGGAAAAGAGGACAGTGGGGTTAATTCATGAGATATTGTCATTGACATTATGGAAGAAAGCATCAATTATAAAGCTTGGACATTTCACCAAGGAATTTGGTCTGCCATTGAAGCTGAATGCATTACTGCTTAAGCACCCTGGCATATTCTATGTCTCAAACAAGTATCAGATCTACACTGTTGTACTTAGAGAAGGTTATAATGGATCAGAACTGATTGAGAAAGATCCATTAGTGGTTGTTAAAGAGAAGTTTGGAGAATTGATGCAGGAGGGACTTCATGAATATAACAAGAGACATCATTTGATGAATTTAGAAAAGAAAAGAATGAAGGGAATGCTTTTGGGCAGGTCAGAGAAGAACAAGAGGAAAGATTTTGAAACAGATGATTCTAATGGTCAAGGAAATAATCTAGGAGGTTTACTTGAGCCAGAGGAAAGGAAAAGATTCTATCAGTCTCTCTTTGATGATGATCCTACATGA

Protein sequence

MLYKVLQKSRYWDPGLSSPCPLKYVLRNFSLWSMKKDPDLESALSRNRRWIANNQIKNIILRCPDQAAPVKFLQKKFKTLDLQGKALNWLKKYPCCFEVYLDNDEHYFRLTKRMMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPKHSDMFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGLPLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHEYNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLFDDDPT
Homology
BLAST of Cucsat.G6044 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.3e-30
Identity = 87/244 (35.66%), Postives = 132/244 (54.10%), Query Frame = 0

Query: 7   EEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPKHSDMFR 66
           +E  +++  E  +V +L KL+MM+ ++R+ + K+S L+ + GLP +F   I  ++   FR
Sbjct: 167 DEMRIRNELEDVLVVKLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFR 226

Query: 67  IVNYTGKKNSMEIELISWKPELAISSIESSACKHGVE------------PAFS-CSLP-- 126
           +V          +EL  W PELA+S+ E S   +               P F+   LP  
Sbjct: 227 VV---PTPRGPALELTHWDPELAVSAAELSEDDNRTRESEERNLIIDRPPKFNRVKLPRG 286

Query: 127 -TTWVNSWEKFNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIK 186
                +   K ++F    Y+SPY + + L  GT E EK   G+IHE+LSLT  K+  +  
Sbjct: 287 LNLSKSETRKISQFRDMQYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDH 346

Query: 187 LGHFTKEFGLPLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKF 235
           L HF +EF    +L  +L++HP +FYVS K +  +V LRE Y  SELI+KDPL +VKEK 
Sbjct: 347 LTHFREEFRFSQQLRGMLIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKM 406

BLAST of Cucsat.G6044 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 5.3e-29
Identity = 84/247 (34.01%), Postives = 130/247 (52.63%), Query Frame = 0

Query: 7   EEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPKHSDMFR 66
           +E  +K+  E   V +L KLLMM+ ++R+ + K++ L+ + GLP +F   I  ++   FR
Sbjct: 152 DELHLKNESEGLAVTKLRKLLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFR 211

Query: 67  IVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEKFN---- 126
           +V          +EL  W PELA+S+ E +  ++        +L    ++   KFN    
Sbjct: 212 VVQ---MDRGPGLELTHWDPELAVSAAEVAEEENRAREEQERNL---IIDRPLKFNRVKL 271

Query: 127 ---------------EFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKAS 186
                          +F   PY+SPY + + L  G+ E EK   G++HEILSLTL K+  
Sbjct: 272 PQGLKLSRGEARRVAQFKEMPYISPYSDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTL 331

Query: 187 IIKLGHFTKEFGLPLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVK 235
           +  L HF +EF     L  +L++HP +FYVS K    +V LRE Y  S+L+EK  LV++K
Sbjct: 332 VDHLTHFREEFRFSQSLRGMLIRHPDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLK 391

BLAST of Cucsat.G6044 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.9e-27
Identity = 89/288 (30.90%), Postives = 143/288 (49.65%), Query Frame = 0

Query: 7   EEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPKHSDMFR 66
           +E  +++  E   V +L KLLMM+  +R+ + K++ L+ + GLP +F   +  ++   FR
Sbjct: 146 DELRLRNESEGLAVAKLRKLLMMSQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFR 205

Query: 67  IVNYTGKKNSMEIELISWKPELAISSI----ESSACKHGVEPAFSCSLPTTW-------- 126
           +V          +EL  W PELA+S+     E S  +   E       P  +        
Sbjct: 206 VVR---MDRGPALELTHWDPELAVSAAELAEEESRAREAEERNLIIDRPLKFNRVRLPKG 265

Query: 127 ----VNSWEKFNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIK 186
                    +   F   PY+SPY + + L  G+ E EK   G++HEILSLT+ K+  +  
Sbjct: 266 LKLTRGEARRIARFKEMPYISPYADFSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDH 325

Query: 187 LGHFTKEFGLPLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKF 246
           L HF +EF     L  ++++HP +FYVS K    +V LRE Y  S+L+EK+ LV++KEK 
Sbjct: 326 LTHFREEFRFSQSLRGMIIRHPDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKM 385

Query: 247 GELMQEGLHEYNKRHHL-MNLEKKRMKGMLLGRSEKNKRKDFETDDSN 278
             L+   +  + +R  +    E + M G L  R + +   D E DD +
Sbjct: 386 RALV--AVPRFPRRAAVGTGEEAEGMNGSLQSRDQVS---DEEYDDED 425

BLAST of Cucsat.G6044 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 8.4e-27
Identity = 84/253 (33.20%), Postives = 130/253 (51.38%), Query Frame = 0

Query: 7   EEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPKHSDMFR 66
           E E V D Q P  V RL KL+MM++  R+ +  +   R  FGLP+DF   +I KH   FR
Sbjct: 138 EHEAVLD-QIPDAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFR 197

Query: 67  IVNYTGKKNSMEIELISWKPELAISSIE---------SSACKHGVEPAFSCSLPTTW--- 126
           +++    ++   IE++   P L+I +IE                V  +F  + P  +   
Sbjct: 198 LIDGEETRDKY-IEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIG 257

Query: 127 ------VNSWEKFNEFNASPYVSPYVNPAGL----VQGTREMEKRTVGLIHEILSLTLWK 186
                 V  W++       PY SPY + +G     ++    +EKR+V  IHE+LSLT+ K
Sbjct: 258 KYFRIAVWKWQRL------PYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEK 317

Query: 187 KASIIKLGHFTKEFGLPLKLNALLLKHPGIFYVS---NKYQIYTVVLREGYNGSELIEKD 235
           K ++ ++ HF     LP KL   LL+H GIFY+S   N  +++TV LREGY   EL+E +
Sbjct: 318 KITLERIAHFRNVMNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPN 377

BLAST of Cucsat.G6044 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.2e-17
Identity = 70/242 (28.93%), Postives = 112/242 (46.28%), Query Frame = 0

Query: 4   LVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPKHSD 63
           L  +E VV       +  RL KL++M+ +  L +  +  ++   GLPDD+L         
Sbjct: 118 LDRQERVVYQTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDS 177

Query: 64  MFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHG----------VEPAFSCSLPTT 123
            FR V+       + ++       L++    +   + G          + P+  C L   
Sbjct: 178 SFRFVDMEDGVKGLAVDYNGGDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGCRLRVK 237

Query: 124 WVNSWEKFNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGH 183
            +  W    EF   PYVSPY + + L   +   EKR VG +HE+L L +   A   KL  
Sbjct: 238 -IEDW--LMEFQKLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLC 297

Query: 184 FTKEFGLPLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGEL 236
             K FGLP K++    +HP IFY+S K +  T +LRE Y     +E  P++ V++K+ +L
Sbjct: 298 LKKHFGLPQKVHKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQL 356

BLAST of Cucsat.G6044 vs. NCBI nr
Match: XP_011656637.1 (protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Cucumis sativus] >KGN46146.1 hypothetical protein Csa_005696 [Cucumis sativus])

HSP 1 Score: 605 bits (1559), Expect = 3.06e-216
Identity = 304/305 (99.67%), Postives = 305/305 (100.00%), Query Frame = 0

Query: 1   MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPK 60
           MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPK
Sbjct: 114 MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPK 173

Query: 61  HSDMFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 120
           HSD+FRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK
Sbjct: 174 HSDIFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 233

Query: 121 FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGL 180
           FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGL
Sbjct: 234 FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGL 293

Query: 181 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 240
           PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE
Sbjct: 294 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 353

Query: 241 YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF 300
           YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF
Sbjct: 354 YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF 413

Query: 301 DDDPT 305
           DDDPT
Sbjct: 414 DDDPT 418

BLAST of Cucsat.G6044 vs. NCBI nr
Match: KAA0054949.1 (protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYK22738.1 protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa])

HSP 1 Score: 597 bits (1540), Expect = 2.39e-213
Identity = 300/305 (98.36%), Postives = 303/305 (99.34%), Query Frame = 0

Query: 1   MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPK 60
           MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNV+KLSELRRNFGLPDDFLIRIIPK
Sbjct: 114 MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVLKLSELRRNFGLPDDFLIRIIPK 173

Query: 61  HSDMFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 120
           HSD+FRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK
Sbjct: 174 HSDIFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 233

Query: 121 FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGL 180
           FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHF+KEFGL
Sbjct: 234 FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFSKEFGL 293

Query: 181 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 240
           PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE
Sbjct: 294 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 353

Query: 241 YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF 300
           YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF
Sbjct: 354 YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF 413

Query: 301 DDDPT 305
           DD P 
Sbjct: 414 DDGPA 418

BLAST of Cucsat.G6044 vs. NCBI nr
Match: XP_016899452.1 (PREDICTED: LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 586 bits (1510), Expect = 8.85e-209
Identity = 294/305 (96.39%), Postives = 298/305 (97.70%), Query Frame = 0

Query: 1   MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPK 60
           MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNV+KLSELRRNFGLPDDFLIRIIPK
Sbjct: 114 MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVLKLSELRRNFGLPDDFLIRIIPK 173

Query: 61  HSDMFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 120
           HSD+FRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK
Sbjct: 174 HSDIFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 233

Query: 121 FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGL 180
           FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHF+KEFGL
Sbjct: 234 FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFSKEFGL 293

Query: 181 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 240
           PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE
Sbjct: 294 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 353

Query: 241 YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF 300
           YNKRHHLMNLEKKRMKG   G+  KNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF
Sbjct: 354 YNKRHHLMNLEKKRMKGXAFGQIRKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF 413

Query: 301 DDDPT 305
           DD P 
Sbjct: 414 DDGPA 418

BLAST of Cucsat.G6044 vs. NCBI nr
Match: KAE8652910.1 (hypothetical protein Csa_022672 [Cucumis sativus])

HSP 1 Score: 578 bits (1490), Expect = 1.02e-205
Identity = 292/293 (99.66%), Postives = 293/293 (100.00%), Query Frame = 0

Query: 1   MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPK 60
           MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPK
Sbjct: 114 MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPK 173

Query: 61  HSDMFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 120
           HSD+FRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK
Sbjct: 174 HSDIFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 233

Query: 121 FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGL 180
           FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGL
Sbjct: 234 FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGL 293

Query: 181 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 240
           PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE
Sbjct: 294 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 353

Query: 241 YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERK 293
           YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERK
Sbjct: 354 YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERK 406

BLAST of Cucsat.G6044 vs. NCBI nr
Match: XP_038886354.1 (protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida] >XP_038886355.1 protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida] >XP_038886356.1 protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida] >XP_038886357.1 protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida])

HSP 1 Score: 563 bits (1451), Expect = 8.50e-200
Identity = 280/302 (92.72%), Postives = 293/302 (97.02%), Query Frame = 0

Query: 1   MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPK 60
           MMALVEEEE VKDMQEP +VKRL KLLMMASNQRLNVVKL EL++NFGL DD+LIRI+PK
Sbjct: 114 MMALVEEEEAVKDMQEPVVVKRLAKLLMMASNQRLNVVKLGELKQNFGLSDDYLIRIVPK 173

Query: 61  HSDMFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 120
           +SDMFRIVNYTGKKNSMEIELISWKPELAIS+IESSACKHGVEPAFSCSLPTTWVNSWEK
Sbjct: 174 YSDMFRIVNYTGKKNSMEIELISWKPELAISNIESSACKHGVEPAFSCSLPTTWVNSWEK 233

Query: 121 FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGL 180
           F+EFNASPYVSPY NPAGLVQGT+EMEKR VGLIHEILSLTLWKKASIIKLGHF++EFGL
Sbjct: 234 FHEFNASPYVSPYENPAGLVQGTKEMEKRIVGLIHEILSLTLWKKASIIKLGHFSREFGL 293

Query: 181 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 240
           PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGS+LIEKDPLVVVKEKFGELMQEGLHE
Sbjct: 294 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSKLIEKDPLVVVKEKFGELMQEGLHE 353

Query: 241 YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF 300
           YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFE DD +GQGNNLGGLLEPEERKRFYQSLF
Sbjct: 354 YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFEPDDPDGQGNNLGGLLEPEERKRFYQSLF 413

Query: 301 DD 302
           DD
Sbjct: 414 DD 415

BLAST of Cucsat.G6044 vs. ExPASy TrEMBL
Match: A0A0A0KEF0 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G057120 PE=4 SV=1)

HSP 1 Score: 605 bits (1559), Expect = 1.48e-216
Identity = 304/305 (99.67%), Postives = 305/305 (100.00%), Query Frame = 0

Query: 1   MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPK 60
           MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPK
Sbjct: 114 MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPK 173

Query: 61  HSDMFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 120
           HSD+FRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK
Sbjct: 174 HSDIFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 233

Query: 121 FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGL 180
           FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGL
Sbjct: 234 FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGL 293

Query: 181 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 240
           PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE
Sbjct: 294 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 353

Query: 241 YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF 300
           YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF
Sbjct: 354 YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF 413

Query: 301 DDDPT 305
           DDDPT
Sbjct: 414 DDDPT 418

BLAST of Cucsat.G6044 vs. ExPASy TrEMBL
Match: A0A5D3DGZ3 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00680 PE=4 SV=1)

HSP 1 Score: 597 bits (1540), Expect = 1.16e-213
Identity = 300/305 (98.36%), Postives = 303/305 (99.34%), Query Frame = 0

Query: 1   MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPK 60
           MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNV+KLSELRRNFGLPDDFLIRIIPK
Sbjct: 114 MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVLKLSELRRNFGLPDDFLIRIIPK 173

Query: 61  HSDMFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 120
           HSD+FRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK
Sbjct: 174 HSDIFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 233

Query: 121 FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGL 180
           FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHF+KEFGL
Sbjct: 234 FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFSKEFGL 293

Query: 181 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 240
           PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE
Sbjct: 294 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 353

Query: 241 YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF 300
           YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF
Sbjct: 354 YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF 413

Query: 301 DDDPT 305
           DD P 
Sbjct: 414 DDGPA 418

BLAST of Cucsat.G6044 vs. ExPASy TrEMBL
Match: A0A1S4DTX7 (LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103485622 PE=4 SV=1)

HSP 1 Score: 586 bits (1510), Expect = 4.28e-209
Identity = 294/305 (96.39%), Postives = 298/305 (97.70%), Query Frame = 0

Query: 1   MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPK 60
           MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNV+KLSELRRNFGLPDDFLIRIIPK
Sbjct: 114 MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVLKLSELRRNFGLPDDFLIRIIPK 173

Query: 61  HSDMFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 120
           HSD+FRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK
Sbjct: 174 HSDIFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 233

Query: 121 FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGL 180
           FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHF+KEFGL
Sbjct: 234 FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFSKEFGL 293

Query: 181 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 240
           PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE
Sbjct: 294 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 353

Query: 241 YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF 300
           YNKRHHLMNLEKKRMKG   G+  KNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF
Sbjct: 354 YNKRHHLMNLEKKRMKGXAFGQIRKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF 413

Query: 301 DDDPT 305
           DD P 
Sbjct: 414 DDGPA 418

BLAST of Cucsat.G6044 vs. ExPASy TrEMBL
Match: A0A6J1FG34 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111445385 PE=4 SV=1)

HSP 1 Score: 550 bits (1418), Expect = 4.34e-195
Identity = 272/302 (90.07%), Postives = 290/302 (96.03%), Query Frame = 0

Query: 1   MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPK 60
           MMALVEEEE +KDMQEPA V+RL KLLMMASNQRLNV+KL EL+R FGLPDD+LIRI+PK
Sbjct: 114 MMALVEEEETIKDMQEPAFVERLAKLLMMASNQRLNVLKLGELKRIFGLPDDYLIRIVPK 173

Query: 61  HSDMFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 120
           HSDMFRIVNYTGK+NSMEIEL+SWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK
Sbjct: 174 HSDMFRIVNYTGKRNSMEIELVSWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 233

Query: 121 FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGL 180
           F+EFNASPY+SPY N AGLV+ T+EMEKRTVGLIHEILSLTLWKKASI+KLGHF++EFGL
Sbjct: 234 FHEFNASPYISPYANHAGLVKDTKEMEKRTVGLIHEILSLTLWKKASIMKLGHFSREFGL 293

Query: 181 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 240
           PLKLNALLLKHPGIFYVSNKYQIYTV+LREGYNGSELIEKDPLVVVKEKFGELMQEGLHE
Sbjct: 294 PLKLNALLLKHPGIFYVSNKYQIYTVLLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 353

Query: 241 YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF 300
           YN+RHHLMNLEKKRMKGMLLGRSEKNKRKD E DD + QGNNLGGLLEPEERKRFYQSLF
Sbjct: 354 YNRRHHLMNLEKKRMKGMLLGRSEKNKRKDSEPDDLDDQGNNLGGLLEPEERKRFYQSLF 413

Query: 301 DD 302
           DD
Sbjct: 414 DD 415

BLAST of Cucsat.G6044 vs. ExPASy TrEMBL
Match: A0A6J1K3L2 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita maxima OX=3661 GN=LOC111489755 PE=4 SV=1)

HSP 1 Score: 550 bits (1417), Expect = 6.16e-195
Identity = 272/302 (90.07%), Postives = 290/302 (96.03%), Query Frame = 0

Query: 1   MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPK 60
           MMALVEEEE VKDMQEPA V+RL KLLMMASNQRLNV+KL ELRRNFGLPDD+LIRI+PK
Sbjct: 114 MMALVEEEETVKDMQEPAFVERLAKLLMMASNQRLNVLKLGELRRNFGLPDDYLIRIVPK 173

Query: 61  HSDMFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 120
           HSDMFRIVNYTGK+NSMEIEL+SWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK
Sbjct: 174 HSDMFRIVNYTGKRNSMEIELVSWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 233

Query: 121 FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGL 180
           F+EFNASPY+SPY   AGLV+ T+EMEKRTVGLIHEILSLTLWKKASI+KLGHF++EFGL
Sbjct: 234 FHEFNASPYISPYAIHAGLVKDTKEMEKRTVGLIHEILSLTLWKKASIMKLGHFSREFGL 293

Query: 181 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 240
           PLKLNALLLKHPGIFYVSNKYQIYTV+LREGYNGSELIEKDPLVVVKE+FGELMQEGLHE
Sbjct: 294 PLKLNALLLKHPGIFYVSNKYQIYTVLLREGYNGSELIEKDPLVVVKERFGELMQEGLHE 353

Query: 241 YNKRHHLMNLEKKRMKGMLLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRFYQSLF 300
           YN+RHHLMNLEKKRMKGMLLGRS+KNKRKDFE DD + QGNNLGGLLEPEERKRFYQ LF
Sbjct: 354 YNRRHHLMNLEKKRMKGMLLGRSKKNKRKDFEPDDLDDQGNNLGGLLEPEERKRFYQYLF 413

Query: 301 DD 302
           DD
Sbjct: 414 DD 415

BLAST of Cucsat.G6044 vs. TAIR 10
Match: AT2G31290.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 414.1 bits (1063), Expect = 9.9e-116
Identity = 199/307 (64.82%), Postives = 253/307 (82.41%), Query Frame = 0

Query: 1   MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPK 60
           MM LVEEEE+VKD QEP +  RL KLLM++ NQRLNVVKL+E +R+FG PDD++IRI+PK
Sbjct: 108 MMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRLNVVKLNEFKRSFGFPDDYVIRIVPK 167

Query: 61  HSDMFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 120
           +SD+FR+VNY+G+K+SMEIEL+ WKPELA+S++E++A K G EP+FSCSLP+TW   WE+
Sbjct: 168 YSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEAAAKKCGSEPSFSCSLPSTWTKPWER 227

Query: 121 FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGL 180
           F EFNA PY+SPY +   LV+G++E EKR+VGL+HE+LSLTLWKK SI+KL HF +EFGL
Sbjct: 228 FMEFNAFPYISPYEDHGDLVEGSKESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGL 287

Query: 181 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 240
           P KLN +LLKHPGIFYV NKYQ++TV+LREGYNGSELI KDPLVVVK+KFGELMQ+GL+E
Sbjct: 288 PEKLNGMLLKHPGIFYVGNKYQVHTVILREGYNGSELIHKDPLVVVKDKFGELMQQGLYE 347

Query: 241 YNKRHHLMNLEKKRMKGM-----LLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRF 300
           YN R +L NLEKKR KG+     ++ + ++N  +D + D+    G+  GGL +PEERKRF
Sbjct: 348 YNHRRYLANLEKKREKGIESLKPVVRKKDRNHDRD-DVDEEENHGDRPGGLFDPEERKRF 407

Query: 301 YQSLFDD 303
           YQ LF D
Sbjct: 408 YQILFSD 413

BLAST of Cucsat.G6044 vs. TAIR 10
Match: AT2G31290.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 414.1 bits (1063), Expect = 9.9e-116
Identity = 199/307 (64.82%), Postives = 253/307 (82.41%), Query Frame = 0

Query: 1   MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPK 60
           MM LVEEEE+VKD QEP +  RL KLLM++ NQRLNVVKL+E +R+FG PDD++IRI+PK
Sbjct: 108 MMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRLNVVKLNEFKRSFGFPDDYVIRIVPK 167

Query: 61  HSDMFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWVNSWEK 120
           +SD+FR+VNY+G+K+SMEIEL+ WKPELA+S++E++A K G EP+FSCSLP+TW   WE+
Sbjct: 168 YSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEAAAKKCGSEPSFSCSLPSTWTKPWER 227

Query: 121 FNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTKEFGL 180
           F EFNA PY+SPY +   LV+G++E EKR+VGL+HE+LSLTLWKK SI+KL HF +EFGL
Sbjct: 228 FMEFNAFPYISPYEDHGDLVEGSKESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGL 287

Query: 181 PLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQEGLHE 240
           P KLN +LLKHPGIFYV NKYQ++TV+LREGYNGSELI KDPLVVVK+KFGELMQ+GL+E
Sbjct: 288 PEKLNGMLLKHPGIFYVGNKYQVHTVILREGYNGSELIHKDPLVVVKDKFGELMQQGLYE 347

Query: 241 YNKRHHLMNLEKKRMKGM-----LLGRSEKNKRKDFETDDSNGQGNNLGGLLEPEERKRF 300
           YN R +L NLEKKR KG+     ++ + ++N  +D + D+    G+  GGL +PEERKRF
Sbjct: 348 YNHRRYLANLEKKREKGIESLKPVVRKKDRNHDRD-DVDEEENHGDRPGGLFDPEERKRF 407

Query: 301 YQSLFDD 303
           YQ LF D
Sbjct: 408 YQILFSD 413

BLAST of Cucsat.G6044 vs. TAIR 10
Match: AT3G63090.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 170.2 bits (430), Expect = 2.5e-42
Identity = 98/271 (36.16%), Postives = 162/271 (59.78%), Query Frame = 0

Query: 1   MMALVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPK 60
           + A ++EE+ +    EP +V +L +LLMMA ++ ++  KL  ++R+FG P+DFL++++ K
Sbjct: 124 LRAFLDEEQRIYSENEPLLVSKLCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQK 183

Query: 61  HSDMFRIVNYTGKKNSMEIELISWKPELAISSIESSA----CKHGV--EPAFSCSLPTTW 120
           + + FR+     +  S  +EL+SW P+ A S IE  A     K GV   P ++  LP+ +
Sbjct: 184 YPNYFRLTGLPEEGKSF-LELVSWNPDFAKSKIELRAEDETLKTGVRIRPNYNVKLPSGF 243

Query: 121 -----VNSWEKFNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASII 180
                +  W +  ++    Y+SPY + + L Q ++EMEKRTVG++HE+LSL+L K+  + 
Sbjct: 244 FLRKEMREWTR--DWLEQDYISPYEDVSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVP 303

Query: 181 KLGHFTKEFGLPLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEK 240
            LG F  EF      +++  +H GIFY+S K  I T VLRE Y   EL+++DPL+ +K+K
Sbjct: 304 TLGKFCDEFRFSNAFSSVFTRHSGIFYLSLKGGIKTAVLREAYKDDELVDRDPLLAIKDK 363

Query: 241 FGELMQEGLHEYNKRHHLMNLEKKRMKGMLL 261
           F  L++EG  E   R  L   + ++ + M+L
Sbjct: 364 FLRLLEEGWQERKDRLKLQREQVQKDREMML 391

BLAST of Cucsat.G6044 vs. TAIR 10
Match: AT5G21970.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 142.5 bits (358), Expect = 5.6e-34
Identity = 84/238 (35.29%), Postives = 131/238 (55.04%), Query Frame = 0

Query: 4   LVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPKHSD 63
           L++E + + +       + +T+ LMM+ +++L + K+   RR+FGLP DF I  +     
Sbjct: 141 LLDEHDKLLEENGDKAAEHVTRCLMMSVDKKLPLDKIVHFRRDFGLPLDFRINWVYNFPQ 200

Query: 64  MFRIVNYTGKKNSMEIELISWKPELAISSIESSA------CKHG---VEPAFSCSLPTTW 123
            F++V     +    +EL+SW P  AI+ +E         C+H    +  AF    P ++
Sbjct: 201 HFKVVKLGDGEE--YLELVSWNPAWAITELEKKTLGITEDCEHKPGMLSLAFPMKFPPSY 260

Query: 124 VNSWE---KFNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKL 183
              +    K   F    Y+SPY +  GL  G++E +KR + ++HE+LS TL K+     L
Sbjct: 261 KKMYRYRGKIEHFQKRSYLSPYADARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHL 320

Query: 184 GHFTKEFGLPLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEK 230
            HF +EF +P KL  + LKH GIFYVS + + ++V L EGY G ELIEK PL++ KEK
Sbjct: 321 THFRREFVMPQKLMRIFLKHCGIFYVSERGKRFSVFLTEGYEGPELIEKCPLILWKEK 376

BLAST of Cucsat.G6044 vs. TAIR 10
Match: AT5G48040.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 140.2 bits (352), Expect = 2.8e-33
Identity = 89/255 (34.90%), Postives = 133/255 (52.16%), Query Frame = 0

Query: 4   LVEEEEVVKDMQEPAIVKRLTKLLMMASNQRLNVVKLSELRRNFGLPDDFLIRIIPKHSD 63
           L  EE  V  + E  ++ RL KLLM+   + L++  +  LR + GLP D+   +I KH D
Sbjct: 129 LYYEEVDVSRVNERDVLVRLCKLLMLTCERTLSLHSIDHLRWDLGLPYDYRDSLITKHPD 188

Query: 64  MFRIVNYTGKKNSMEIELISWKPELAISSIESSACKHGVEPAFSCSLPTTWV-------N 123
           +F +V  +   +   ++LI W   LA+S ++    +  V      + P  +         
Sbjct: 189 LFSLVKLSSDLDG--LKLIHWDEHLAVSQMQ---LREDVGNDERMAFPVKFTRGFGLKRK 248

Query: 124 SWEKFNEFNASPYVSPYVNPAGLVQGTREMEKRTVGLIHEILSLTLWKKASIIKLGHFTK 183
           S E   E+   PY SPYV+ + L   T   EKR VG+ HE+L LT+ KK     + +  K
Sbjct: 249 SIEWLQEWQRLPYTSPYVDASHLDPRTDLSEKRNVGVFHELLHLTIGKKTERKNVSNLRK 308

Query: 184 EFGLPLKLNALLLKHPGIFYVSNKYQIYTVVLREGYNGSELIEKDPLVVVKEKFGELMQE 243
            F LP K   +  +HPGIFY+S K    TV+LRE Y+   LIEK PLV V+EKF  +M E
Sbjct: 309 PFALPQKFTKVFERHPGIFYISMKCDTQTVILREAYDRRHLIEKHPLVEVREKFANMMNE 368

Query: 244 GLHEYNKRHHLMNLE 252
           G  + ++  +  ++E
Sbjct: 369 GFLDRSRGLYQKSVE 378

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0MFS51.3e-3035.66Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... [more]
Q65XL55.3e-2934.01Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... [more]
B6TTV82.9e-2730.90Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... [more]
Q689D68.4e-2733.20Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... [more]
Q9ZUZ61.2e-1728.93Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... [more]
Match NameE-valueIdentityDescription
XP_011656637.13.06e-21699.67protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Cucumis sativus] >KGN46146.... [more]
KAA0054949.12.39e-21398.36protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo var. makuwa] >TYK22738.1 prote... [more]
XP_016899452.18.85e-20996.39PREDICTED: LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis mel... [more]
KAE8652910.11.02e-20599.66hypothetical protein Csa_022672 [Cucumis sativus][more]
XP_038886354.18.50e-20092.72protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida] >XP_0388... [more]
Match NameE-valueIdentityDescription
A0A0A0KEF01.48e-21699.67PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G057120 PE=4 S... [more]
A0A5D3DGZ31.16e-21398.36Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A1S4DTX74.28e-20996.39LOW QUALITY PROTEIN: protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656... [more]
A0A6J1FG344.34e-19590.07protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114453... [more]
A0A6J1K3L26.16e-19590.07protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucurbita maxima OX=3661 GN=LOC111489755 ... [more]
Match NameE-valueIdentityDescription
AT2G31290.19.9e-11664.82Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT2G31290.29.9e-11664.82Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT3G63090.12.5e-4236.16Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT5G21970.15.6e-3435.29Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT5G48040.12.8e-3334.90Ubiquitin carboxyl-terminal hydrolase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 35..350
e-value: 4.0E-107
score: 357.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..418
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 379..418
NoneNo IPR availablePANTHERPTHR31476:SF5UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEINcoord: 22..406
IPR045040PORR familyPANTHERPTHR31476PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTICcoord: 22..406

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G6044.T1Cucsat.G6044.T1mRNA
Cucsat.G6044.T3Cucsat.G6044.T3mRNA
Cucsat.G6044.T2Cucsat.G6044.T2mRNA
Cucsat.G6044.T4Cucsat.G6044.T4mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding