Cucsat.G5767 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGAAGGATGCGCATAACACAAAACAATAGTGATATCAAAATAAAAAAGTAAAGTGGAAAGTTAATTCATGTTTATCCTTTCTTATTTTTATAAGTCTAATATTCATACTATATATATTGTATTGTAAAGAAAAGGAAAAGGCGGAAGCAAAGCTGTCGTCCATCTTTGGTTTTCCGTTTTCCATTATTGCCGTAGGCTCACCTCCGATCACCAACCGGCTGCTCTAGTTTTAAATTCTTCTCTTTTTGTCTCCATTGATCTCCAACCAAACCCAACCTCTTATTCAATTTCTTCTATCTTATCTTCCTCCCTCCGTTGCCGTTACCGATCGGCGGCACTTCCCCTACCGTTACTCTTCTTTTTTCTCTTCTTGCCTCACTTTCTGCTGCATCAATCCGTCGGAATCTACTTGGGTTAATTCCTTTTTTCTTTTTTCTCTGTTTTAACACATTAGGGTAAATTTTGAATTGGATTTAAAACAAGATTTCTAATTCTGTTTTTTGGAATTCATTCTATAAAATTTTATTCGAAATGCTGATTTGAAATTCTTCCAATCCAGGGGTTCCTAACACAGGGTGAGAGATTTCAGCATCAATGGCTTTTAGAAGTGTCTCGTTCCCATCTACAGCTCCCATTTCTCATGTTCAGTAAGCTCCCATTTTTGCATCTGGGTTTCTCTTTAATCCTTTAATTCTTTGTGTTTTGTCTTCGAATTATCTAGGGTTAACTTCATTTCTCCATTTTTTTTCACCTGCAATTTGTTTGATTTTTTTTTCAACTGTAATTTGTTTGATTTTCCTTCTTGCTCATGGTTAAATTTTGTGGAGCCTGATCTATTTATAATATATTTTTTTTTTTTTTGAAGTAACCTTTGTGATTTAGAAGGATGGATCATGTTTGATGATGAAATTCTTCTTTTCATTTGTTTAAATGTTACTTCAAAAACCTCTGTGATCATCTGAGGTCCCTCTTTACTTCTATGCTTGAGGAGCCGCAATTTTCAGGCGTCCACAAGGAGAGCTATACACGTCACCATCCATTTTACTACCAATTGTTTTTGGAGAAATGACGGCAGAACATCATGAATGACACAGAATAGCCTCTATTGACAAAAAATAATTATGTTTTATGCATTGGATCTCTTGGTCCCATTTGAATTCACTTTTGTTATTTGAACATAACAGGCTAATGCCTTCTCTTAGAGTTTAACGTTCCAGTTTAGCATAATAAAAAGAAAAGAAAAAAACTCACCATTCTACAATAAACTGCAGCTAGCTATTAAGTTTTACTTCTGAAGTTCAAGAACATTGATTGGAACTTATTCAATGTCCCTCTTTTAGGCGTTGGCAATTTTTTTGAAGTAAATGAAGTATTTTTTTATGTTCTATGATTTTCCTCACCCGGCTATGTCTTTTAAGTTTTACGTTATTCTCTAAACGTATTGCATAATTTTTGTTTTATGCAGAAGATTCAAAGACTTGCAGTCTTTTGTTGGAATCAACTACGTTAAACCATACACGTCAACTGGCCTTGTTTTGGAGTTACCCCCAAACTGCAAAGCTAGTAAACTATTTTTGGGCACCAGGGGTTCAGTCCAAACAAGAGCTACAGTGATATCTGGAGAAGGAGGAAGTCTGTCTTCTTCCAATGGAAATGCTGTAGTTGTGAATGATATCACATCTTTCAATCAGCCAGATTCAGCTTCAATAAGTAAAAGTTTTCCCATCGATGAAGATGAATATGATTTTGATCGCCCAACGGAAGGTTTTGCTTCTGTTGCAGATGCCATTGAAGATGTTCGCCAGGGAAAGGTGGTTCATTATTCTAGTTTTTCTCTTTCTTCAACTTTTTTTTATGTCATTTGACATGAGAGCATCTATTTTTCTACCCTGATTTTCACTTCATCTTAGTTACAAGAATTTTGATGTTTCAGATGGTGCTTGTGGTTGATGATGAAGATAGAGAAAACGAGGGAGATTTGATCATGGCTGCACAAGCTGCAACTCCGGAAGCCATGGCTTTTATTGTAAAACATGGAACAGGTATTGTTTGTGTGGCCATGAAAGGTGAAGACCTGGAGAGGTTACAGATTCCACTTATGGTGAATGAAAAGGAGAACGAGGAGAAACTTTGTACTGCTTTTACGGTGACAGTGGTATGAGTTCTTCACTTGGCATTTTAGAGTATTATTCAAAATTTAATAAATGTAGTCAGTAATCCCTGTAAGAGTGCTCATAATTACAGTTTTATTGACACTTTCTTCTGCTTAATATTTTTTTCAAATCAATTTGTCCTTGTAGCATAGCAATTTCGTATGATATATAATGCAATTTTTTACAGGATGCAAGAGAAGGTACAACCACCGGAGTCTCAGCTAGCGATAGGGCCGCAACAGTATTGGCACTTGCATCAAGAAATTCAAAACCTTATGATTTTAAGCGGCCAGGCCATATTTTTCCCCTCAAGTACAGGGAAGGTGGTGTTTTGAAGAGAGCTGGACATACTGAAGCATCTGTTGATCTTGCGGTGCTTGCTGGATTAGCCCCGGTTGGAATCCTTTGTGAGGTAGTTGATGAAGATGGTTCTATGGCTAGGTTACCAAAACTCCGTGAATTTGCCAAACGGGAAAACATAAAAATCATTTCCATTGCTGATTTAGTCAGGTAAGTGGATATCTTTCTTGTTAAAGTTGTGATTGTGTTAGCTCTGCATAATAATCTATATCTTGAAATACCCTTTATATGAAACAAGTTTCTTGCTTGTATAATGACCACAACTTCATTTCAGCTTTACAACAAAACTATGTGTTGTATTCTTATTCATATATTTCATTTCTTGTTCCCCATGGTTTAGTTCTAACAAATGAAGGTATTGACGACAGGTATAGGAGGAAGAGAGATAGATTAGTTGAATGTGCTGGAGATGCTGCTCGTATGCCGACTAAATGGGGACCATTTCAGGCATATTGCTACAGATCTATTTTAGATGGAATTGAGCATATTGCAATGGTTAAGGTAACTACTTTTGTCTCATAGTGCAAAGCTTTGTAAAAGCACTTCTATTACTGGTGCAACTATATTTGAACGCTTTTGTTAGTGTTGCATGATGAGCCTGCCCCAATCTGAAGAAGTTATTTTATTCGAATTTCTCTTGAGATGTTCTATCTTTTAGTTCCTAAATTCTGCCAAGTACCGAGCATGGTGGCGCGCTCTTAGATGAAATTTCAGCATCATAATGAGATCAGGACTTGATTACAAATTTACGGACTACTTGCTTTTGGCAGGGTGATATTGGTGATGGACAAGATATTCTGGTGAGGGTACACTCAGAATGCCTCACTGGAGATATTTTTGGATCAGCTAGATGCGACTGCGGAAACCAGCTTGCGCTAGCGATGCAGATGATTGAGGCAGAAGGCAGGGGTGTCTTGGTTTATCTTCGTGGTCATGAAGGACGAGGCATAGGTTTGGGCCACAAACTTCGTGCATATAACTTGCAAGATGCTGGGCGGGATACTGTTGAAGCAAATGAGGATCTAGGATTGCCTGTGGATTCTCGCGAATATGGGATTGGTGCACAGGTACATATGGATTTAACCTGAAGACGAAACAACTTTTATTAGATCACATGAGTACGTTCCTTTTGGCTTTTATAACAAAATCTAATCTCCTCTTTGTTTCGTGCAGATTTTAAGGGGTCTTGGGGTGAGAACAATGAAGCTAATGACAAACAACCCGACAAAGTACAAAGGCCTAAAGGGGTATGGCTTAGAAGTCTCAGGTAGAGTTCCCCTGATAACACCAATTACAAAGGACAACAAGAGATACCTAGAGACGAAGCGTGCCAAAATGGGGCATGTCTACAACTTGGAGTTTGGTGGTAGATTAAGAAATCGAATTGATGAACATGAAACATCGAATGGCAGTGTTGCATCAAGTGATGCTGTGGCTTGAGCTAGTAATGCGGGACTTTAAAGAGAGAAAAAGAAAGGGTTGATAATCAAAGGTGTTGGAAGAGAAAATGACGCTGCTGCAGCTGCTGGCTGACCCATAAGAGATAAAAGTCTAACTTGTACTAAAAACCATAACATTGGGTGTTATAGTTATTATTGATTCGGTTTAATTTGTTGGGATTATTGTTTGATTGGAAAATTCACAACGGGGATGAAGTTTCAAGAATTAGAATAATCCATGATATGTGGAATGAACTTACGGTGCTACTCTAAGAAAGAAGCACAGATATGGGACAGATATAATCAATACACACGTTAGGACACGATTTGTTTAATGATAAAGTTCATAAAACAGTACTAATATGTAATAGTATTGAAACTTATGGTTGAAATACGCTTCCTAATAGAAAAAGCCTTTTTTTTTTTAGTAAAACATTCCTGGGTCTATTTCTGCATGATATATGGGCAATTTCAGGTTGTGGGTGGCGGTGGAGCCATTAATGTAAGAAGTTGGACGAAGAAGGGGTTTATCGGTTGCCATTGACTGAGGCCAACACAAAGAACCGGCGTTGGAGTCTGGTTTGTGGTCGGTCGCTGGTGGCTGGCTGGTGTGATTCCAATAAATGGTGGGCTTGACGGGAAAGTTTAAAGTTGGTCGAGGGGTTTTGATTCAGGGGCACTTGCAAAAATGGCAAAATAAGATATAATAATTAAGTCCAAAGCATATACATTATATTATTGCAAAAATGGCAAAAACGAAGTCTAGTTCACACATCAAGAGGTAAAATGTCACAAATGCCCTTGTTACTAATATACGTTTGATACATCTAATACACTCCTTAATATACCTGATATTTCTTGATACACTCGATACATTTTATTGATACACCTGATGCACCTGATACACTCGATACCGAAATATACTAATATATGTTTAAAACACCTGATACACTGCATATACATT ATGGTGCTTGTGGTTGATGATGAAGATAGAGAAAACGAGGGAGATTTGATCATGGCTGCACAAGCTGCAACTCCGGAAGCCATGGCTTTTATTGTAAAACATGGAACAGGTATTGTTTGTGTGGCCATGAAAGGTGAAGACCTGGAGAGGTTACAGATTCCACTTATGGTGAATGAAAAGGAGAACGAGGAGAAACTTTGTACTGCTTTTACGGTGACAGTGGATGCAAGAGAAGGTACAACCACCGGAGTCTCAGCTAGCGATAGGGCCGCAACAGTATTGGCACTTGCATCAAGAAATTCAAAACCTTATGATTTTAAGCGGCCAGGCCATATTTTTCCCCTCAAGTACAGGGAAGGTGGTGTTTTGAAGAGAGCTGGACATACTGAAGCATCTGTTGATCTTGCGGTGCTTGCTGGATTAGCCCCGGTTGGAATCCTTTGTGAGGTAGTTGATGAAGATGGTTCTATGGCTAGGTTACCAAAACTCCGTGAATTTGCCAAACGGGAAAACATAAAAATCATTTCCATTGCTGATTTAGTCAGGTAA MVLVVDDEDRENEGDLIMAAQAATPEAMAFIVKHGTGIVCVAMKGEDLERLQIPLMVNEKENEEKLCTAFTVTVDAREGTTTGVSASDRAATVLALASRNSKPYDFKRPGHIFPLKYREGGVLKRAGHTEASVDLAVLAGLAPVGILCEVVDEDGSMARLPKLREFAKRENIKIISIADLVR Homology
BLAST of Cucsat.G5767 vs. ExPASy Swiss-Prot
Match: P47924 (Bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RIBA1 PE=1 SV=2) HSP 1 Score: 303.5 bits (776), Expect = 1.6e-81 Identity = 149/182 (81.87%), Postives = 168/182 (92.31%), Query Frame = 0
BLAST of Cucsat.G5767 vs. ExPASy Swiss-Prot
Match: Q0E079 (Probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RIBA2 PE=2 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 4.3e-79 Identity = 147/182 (80.77%), Postives = 164/182 (90.11%), Query Frame = 0
BLAST of Cucsat.G5767 vs. ExPASy Swiss-Prot
Match: Q6NLQ7 (Monofunctional riboflavin biosynthesis protein RIBA 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RIBA2 PE=1 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 7.4e-79 Identity = 144/182 (79.12%), Postives = 167/182 (91.76%), Query Frame = 0
BLAST of Cucsat.G5767 vs. ExPASy Swiss-Prot
Match: Q6Z234 (Probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RIBA1 PE=2 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 1.8e-77 Identity = 148/182 (81.32%), Postives = 165/182 (90.66%), Query Frame = 0
BLAST of Cucsat.G5767 vs. ExPASy Swiss-Prot
Match: Q0AXM5 (Riboflavin biosynthesis protein RibBA OS=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) OX=335541 GN=ribBA PE=3 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 4.3e-55 Identity = 109/181 (60.22%), Postives = 143/181 (79.01%), Query Frame = 0
BLAST of Cucsat.G5767 vs. NCBI nr
Match: XP_004150928.1 (bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Cucumis sativus] >XP_011656512.1 bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic [Cucumis sativus] >KGN45942.1 hypothetical protein Csa_005146 [Cucumis sativus]) HSP 1 Score: 355 bits (910), Expect = 5.43e-118 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Cucsat.G5767 vs. NCBI nr
Match: XP_008445639.1 (PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like [Cucumis melo] >KAA0049663.1 bifunctional riboflavin biosynthesis protein RIBA 1 [Cucumis melo var. makuwa] >TYK18509.1 bifunctional riboflavin biosynthesis protein RIBA 1 [Cucumis melo var. makuwa]) HSP 1 Score: 355 bits (910), Expect = 5.43e-118 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Cucsat.G5767 vs. NCBI nr
Match: XP_038885189.1 (bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like [Benincasa hispida]) HSP 1 Score: 348 bits (893), Expect = 2.00e-115 Identity = 178/182 (97.80%), Postives = 181/182 (99.45%), Query Frame = 0
BLAST of Cucsat.G5767 vs. NCBI nr
Match: XP_023550403.1 (bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023550404.1 bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 345 bits (885), Expect = 2.20e-114 Identity = 175/182 (96.15%), Postives = 181/182 (99.45%), Query Frame = 0
BLAST of Cucsat.G5767 vs. NCBI nr
Match: XP_022994018.1 (bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like isoform X2 [Cucurbita maxima] >XP_022994019.1 bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 345 bits (885), Expect = 2.20e-114 Identity = 175/182 (96.15%), Postives = 181/182 (99.45%), Query Frame = 0
BLAST of Cucsat.G5767 vs. ExPASy TrEMBL
Match: A0A5D3D4N7 (GTP cyclohydrolase II OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5066G00100 PE=3 SV=1) HSP 1 Score: 355 bits (910), Expect = 2.63e-118 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Cucsat.G5767 vs. ExPASy TrEMBL
Match: A0A0A0KC47 (GTP cyclohydrolase II OS=Cucumis sativus OX=3659 GN=Csa_6G029440 PE=3 SV=1) HSP 1 Score: 355 bits (910), Expect = 2.63e-118 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Cucsat.G5767 vs. ExPASy TrEMBL
Match: A0A1S3BD69 (GTP cyclohydrolase II OS=Cucumis melo OX=3656 GN=LOC103488598 PE=3 SV=1) HSP 1 Score: 355 bits (910), Expect = 2.63e-118 Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0
BLAST of Cucsat.G5767 vs. ExPASy TrEMBL
Match: A0A6J1K3Y9 (GTP cyclohydrolase II OS=Cucurbita maxima OX=3661 GN=LOC111489835 PE=3 SV=1) HSP 1 Score: 345 bits (885), Expect = 1.07e-114 Identity = 175/182 (96.15%), Postives = 181/182 (99.45%), Query Frame = 0
BLAST of Cucsat.G5767 vs. ExPASy TrEMBL
Match: A0A6J1FEW9 (GTP cyclohydrolase II OS=Cucurbita moschata OX=3662 GN=LOC111445086 PE=3 SV=1) HSP 1 Score: 345 bits (885), Expect = 1.07e-114 Identity = 175/182 (96.15%), Postives = 181/182 (99.45%), Query Frame = 0
BLAST of Cucsat.G5767 vs. TAIR 10
Match: AT5G64300.1 (GTP cyclohydrolase II ) HSP 1 Score: 303.5 bits (776), Expect = 1.1e-82 Identity = 149/182 (81.87%), Postives = 168/182 (92.31%), Query Frame = 0
BLAST of Cucsat.G5767 vs. TAIR 10
Match: AT2G22450.1 (riboflavin biosynthesis protein, putative ) HSP 1 Score: 294.7 bits (753), Expect = 5.2e-80 Identity = 144/182 (79.12%), Postives = 167/182 (91.76%), Query Frame = 0
BLAST of Cucsat.G5767 vs. TAIR 10
Match: AT5G59750.1 (DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II ) HSP 1 Score: 214.2 bits (544), Expect = 9.0e-56 Identity = 108/182 (59.34%), Postives = 144/182 (79.12%), Query Frame = 0
BLAST of Cucsat.G5767 vs. TAIR 10
Match: AT5G59750.2 (DHBP synthase RibB-like alpha/beta domain;GTP cyclohydrolase II ) HSP 1 Score: 214.2 bits (544), Expect = 9.0e-56 Identity = 108/182 (59.34%), Postives = 144/182 (79.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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