![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Cucsat.G5732 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAACTTCTGTCAATTAGTTAAAGAAATCCAACACCGTTTTTTAAAAACATTGGGCCAAAATTCCATCTTCAATTTTGCTTTTAAACAGTGTCATTTCCGTAATAAAACTAAACTCTAAGTCCTATTCCATTTTTTCATTTTTATATATTTCATCCCATCTTCATCTTCATCTTCATCTTCATCTTCATCAACTCAACCCAACCCAACCCAACCGACCCAGTGGAATATGGATGTTGTTACTCAAAGAAACTCCTCTTCCTCCGTTTCCATGTTGAATCCCAACGCTCCTTTGTTCGTTCCCATGGCCTATAGAACGGTGGAGGATTTCTCCGACCAGTGGTGGGAGCTCATCCAGTCCTCCCCCTGGTTCCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGAACTTTCTTTTGGTGAAAATGAAGAATTCATCCTTCCGGATCTTGAAAGTTTCTTCGACGACTTCACTCGTCAACGTAAGAAACGAAATCGAGTCATCGAGTCAGTTTATTTCTTTTCCTTCTCTTAATCGAGCTTTCTAATTTGTTGTTTATTTTGTTTTCTTCTTCAGAGGAAGAGGAAGAATTGGAATTCTCGAAGGATTTAGTTCCAATGGGTGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATTGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAACCGAGATAGATTTCACGCGCTCAATCGAGTACGTTTCTTCATCAGAACTCCAGAAACAGTTTGAATTGTTGTTGATCTAGGGTTTTTCATTTCCTTTTTTTTTTTTTTTTAATGTACAGAGTCTAGAACTTGATCTGTTACAAATTAACTCTGATGAATCTGTGTTTAGTTCTTGTAAATTTGAACCAAGTCTTTACTTTCGATTATGATAAAATAAAAAAGAGTTTCAAAATTCTCAACAAAGTAGATCCATCCATCACTAACAACATCAGAATTCAAATTCTTATTCTCTTCTCTAATCTTGATAATCGCCAAAATTCTCTAGTAATTAATGTTGTTGAGTTCATCATCTTGCCATGGAATTGCAGTTTTTCTAATTTTCTGAAGAACTTTGATAACTTCTTCGTTAGTGACATTGCCTGTAACAATCACTTTGTTCATCTCCATATCTACATTATATGTTTCTATATCTGCAAATGGAGAAGAAAAGAAAGGAAAATAAACCCCAAATGAATTACTTAACCATAGGAGGCTCTGACGAAGACATTGAAAACACAAACCTTGGATTTTCTTGATGGCTTTGAGAATCTTCTTGATACACTCCTCACAATGCAAAAAGACCTTCAATTCCACCACCTATGGCCAGAAAAACAACACCCATTAGAACCCGTAAGAAATCAAATTCCAAGAATTTTCTCTCTTAGAAATACTTGCATTAGCCATTCTGTGACTGATCAATTCCTGATTTCAAGTGCAAAAATCTGAAGAGTGTTGAGGAAATAAAATGGTATTTCTTATCCTTCAACAAAAGGAAGTGTTTTGGTTAAGTAAAGAATTTATGTATGTTGATAGAGGAAAAAAGTAAGACGAAGGAATTGGATTCTTCATTTGGTGGATTGTTGGATGCAATTTTCAGCTCAAAAAGGTGAGATTCTTGATTGAGGAAGAATAGAATGTTGTGTGGAAATATCCTCAATTTTTACTTAGCTGAGCTTTTTCTTTTTTTTCTTTTGGGGATATGGCCATTTTCTGAATTCTGTGTCCCCCACATTGCACTTTCGGTATCCACTCCCCTCTTTTGTCGTTAACATGACCCACTTTCTCAGCAAATATCTTTCACTTTTTCCTTTATTATTATTTCAAAGTCACACACTATCATAAATTCTTTATTTTTTAAGATAAGATTATGTAATATTATTTTGTTTTTGATTTCCAAAAGATTCTAATTTCTAATCTTTCTTTTTATTTATATAATTAAAATCTTGACGTGTTTGTCTGATAGTTTGTGTTGGAAAAGGTGGGCTTCTATGGACCTGGATGTAGATTGTCACAAAAGGCACATGAATCTTCTAGGCCCATTTTAATATTGGTTCGGCCCACTTATGTTGAACAAAAATGACTTCACGTGTCATTTTAAGAGATTTTGATACCATACTTTTCTATTCTACCTACATAAATTCCTTTTAAAAATTGACTATTTATACTCATGTTAGGATTTTTCCACCCATTTTGTACAAAAATCAAACAAACGCAAATATATATAAAGGAAAAAAAAAAAAAGCTTTTGTTTTCAATATCTCGTAAAAGAAAATTTCAATTTTAGAGCTATGTTTAGACCATAGAAGATTTTGTAGAATTTCTCAGTCCATTCTTGAGAAGACGAGGTGACACACATGAGTTTCATTAGAGAATTGAAAACGGTTGATTTTTATGATTGTATGTTTGGATTATTGTATATTTTAAATTTCTACTGTCTCCTTTCTATTCTTTATGGACCACAGTAGCTTTTTTTTTAAAAAAAATAATTATCATTCTTGTTTTGTTCTTTTCAAATCTTTTGAAGAATAATAACTAATATAGATAATTTTTGGTATAATGTGCATACATTTCGTTTATGTCCGAATTCTTGGTTTAATAGAGCCATAAACCTTTACTATAGATATGTAGCCATTTACTCAAGTTCTTTTGTTCTGTTTAATTTTATATTGAGACGATTATAAGAACAATGTACACTATTTTGGTATAATGTATGGATGTTAGTAGGTTCATAAACTGTTGTTATAAATATGTAATATGCATGAGGTGATATGCTCTAAATTGATA ATGGATGTTGTTACTCAAAGAAACTCCTCTTCCTCCGTTTCCATGTTGAATCCCAACGCTCCTTTGTTCGTTCCCATGGCCTATAGAACGGTGGAGGATTTCTCCGACCAGTGGTGGGAGCTCATCCAGTCCTCCCCCTGGTTCCGTGAGTACTGGCTTCAAGAACGCTTTCAAGATCCTCAAAATGAACTTTCTTTTGGTGAAAATGAAGAATTCATCCTTCCGGATCTTGAAAGTTTCTTCGACGACTTCACTCGTCAACAGGAAGAGGAAGAATTGGAATTCTCGAAGGATTTAGTTCCAATGGGTGCTTTCAAATGGCAGAAGGCTCGGTCTGGAGCGGAGGTTCCTAAGTATGCTCAAAAGGCTCCCAAGATTGTGAACGTGAAAGTGAGTCCGAGAACGATTCACCAACCGAGATAG MDVVTQRNSSSSVSMLNPNAPLFVPMAYRTVEDFSDQWWELIQSSPWFREYWLQERFQDPQNELSFGENEEFILPDLESFFDDFTRQQEEEELEFSKDLVPMGAFKWQKARSGAEVPKYAQKAPKIVNVKVSPRTIHQPR Homology
BLAST of Cucsat.G5732 vs. ExPASy Swiss-Prot
Match: I1JIC4 (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Glycine max OX=3847 GN=ERD15 PE=2 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 5.2e-32 Identity = 70/130 (53.85%), Postives = 90/130 (69.23%), Query Frame = 0
BLAST of Cucsat.G5732 vs. ExPASy Swiss-Prot
Match: Q39096 (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana OX=3702 GN=ERD15 PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 5.8e-15 Identity = 56/156 (35.90%), Postives = 76/156 (48.72%), Query Frame = 0
BLAST of Cucsat.G5732 vs. ExPASy Swiss-Prot
Match: Q94AR4 (Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana OX=3702 GN=CID2 PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.3e-10 Identity = 48/140 (34.29%), Postives = 72/140 (51.43%), Query Frame = 0
BLAST of Cucsat.G5732 vs. NCBI nr
Match: KGN45812.1 (hypothetical protein Csa_005499 [Cucumis sativus]) HSP 1 Score: 285 bits (730), Expect = 3.80e-97 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of Cucsat.G5732 vs. NCBI nr
Match: KAA0052043.1 (Poly(A)-binding protein C-terminal interacting protein 6 [Cucumis melo var. makuwa] >TYK04518.1 Poly(A)-binding protein C-terminal interacting protein 6 [Cucumis melo var. makuwa]) HSP 1 Score: 283 bits (724), Expect = 3.13e-96 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of Cucsat.G5732 vs. NCBI nr
Match: XP_038884078.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Benincasa hispida]) HSP 1 Score: 275 bits (702), Expect = 7.09e-93 Identity = 134/140 (95.71%), Postives = 137/140 (97.86%), Query Frame = 0
BLAST of Cucsat.G5732 vs. NCBI nr
Match: NP_001295813.1 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis sativus] >AAQ18141.1 poly(A)-binding protein C-terminal interacting protein 6 [Cucumis sativus]) HSP 1 Score: 268 bits (686), Expect = 2.02e-90 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Cucsat.G5732 vs. NCBI nr
Match: KAG6602602.1 (Protein EARLY RESPONSIVE TO DEHYDRATION 15, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 258 bits (659), Expect = 2.56e-86 Identity = 123/140 (87.86%), Postives = 131/140 (93.57%), Query Frame = 0
BLAST of Cucsat.G5732 vs. ExPASy TrEMBL
Match: A0A0A0KBP8 (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus OX=3659 GN=Csa_6G013350 PE=4 SV=1) HSP 1 Score: 285 bits (730), Expect = 1.84e-97 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of Cucsat.G5732 vs. ExPASy TrEMBL
Match: A0A5D3BZS0 (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001350 PE=4 SV=1) HSP 1 Score: 283 bits (724), Expect = 1.51e-96 Identity = 138/140 (98.57%), Postives = 139/140 (99.29%), Query Frame = 0
BLAST of Cucsat.G5732 vs. ExPASy TrEMBL
Match: Q6ELF9 (Poly(A)-binding protein C-terminal interacting protein 6 OS=Cucumis sativus OX=3659 PE=2 SV=1) HSP 1 Score: 268 bits (686), Expect = 9.79e-91 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Cucsat.G5732 vs. ExPASy TrEMBL
Match: A0A6J1JP33 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita maxima OX=3661 GN=LOC111487067 PE=4 SV=1) HSP 1 Score: 255 bits (651), Expect = 2.06e-85 Identity = 122/140 (87.14%), Postives = 129/140 (92.14%), Query Frame = 0
BLAST of Cucsat.G5732 vs. ExPASy TrEMBL
Match: A0A6J1JQA7 (protein EARLY RESPONSIVE TO DEHYDRATION 15-like OS=Cucurbita maxima OX=3661 GN=LOC111488890 PE=4 SV=1) HSP 1 Score: 254 bits (650), Expect = 2.93e-85 Identity = 122/140 (87.14%), Postives = 131/140 (93.57%), Query Frame = 0
BLAST of Cucsat.G5732 vs. TAIR 10
Match: AT2G41430.1 (dehydration-induced protein (ERD15) ) HSP 1 Score: 82.0 bits (201), Expect = 4.1e-16 Identity = 56/156 (35.90%), Postives = 76/156 (48.72%), Query Frame = 0
BLAST of Cucsat.G5732 vs. TAIR 10
Match: AT2G41430.4 (dehydration-induced protein (ERD15) ) HSP 1 Score: 82.0 bits (201), Expect = 4.1e-16 Identity = 56/156 (35.90%), Postives = 76/156 (48.72%), Query Frame = 0
BLAST of Cucsat.G5732 vs. TAIR 10
Match: AT2G41430.2 (dehydration-induced protein (ERD15) ) HSP 1 Score: 82.0 bits (201), Expect = 4.1e-16 Identity = 56/156 (35.90%), Postives = 76/156 (48.72%), Query Frame = 0
BLAST of Cucsat.G5732 vs. TAIR 10
Match: AT2G41430.5 (dehydration-induced protein (ERD15) ) HSP 1 Score: 82.0 bits (201), Expect = 4.1e-16 Identity = 56/156 (35.90%), Postives = 76/156 (48.72%), Query Frame = 0
BLAST of Cucsat.G5732 vs. TAIR 10
Match: AT2G41430.3 (dehydration-induced protein (ERD15) ) HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12 Identity = 34/83 (40.96%), Postives = 46/83 (55.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|