Cucsat.G5665 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G5665
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Unknown protein
Location	ctg1402: 290548 .. 291607 (+)
RNA-Seq Expression	Cucsat.G5665
Synteny	Cucsat.G5665

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AACACAACCATGGCTTCCACTATAAAAAGGGCCAAACCCTAAAGAACGTCTTTCATAACTTCAAGATCATAGAAATTGTAATAATATTGAGGAGATCAAAAGGCCAAATGGAACTCAGGCTTGAGAACATCCATAGTTTTTCAAAAGCACTTCTCCCACTCGAGCGATTCCATGATGTAGCAGATTTAAAATGCTCACCCAAAATGTTCTCCTTAATAATCTCTCGCCATTTCCCTCTTATCATTACATCTCTTCAACTTCTTCCTCCTTACTTCACAAATTTTTTTTGTCAAAACCAAATTTTCCAATACCAAATCCCCATCAAATCTTTTTACAATATCATGAACACTATGAAACAAAGATTTTATTCTTCAATGATACTCTTTCTTCATCACCAACAACCCCTCAATCAAATCTTCCTTCAGTTTCGCAATCCAAGTAAGTCTATACACACACTCAAAGACTTTCATTATTCAAGAATTTGTTTCATTTCTTGCAATCAAGTTTCGAGTTTGCATTTAAATTTCCTTAGGGGTGGTTGATGATCAAGATGTACTTTTTCATGGATTTCCATTGTCACCTTCAAGAGAGGAAGATGTAGGGGAAATTGATTATGGAATCTTTTTCTCAATTGACTCACTTGTGCTTAGATTCATTGCAACAGAGTTAGATGATTACGATGGTAATTAATTAATTTTAGAAAAAACAATCTTTTCTTTTCTCTCTTTAATTAAGTCGTTATTAACTTCTAAAATATATTCTCTTGTGGTAATTAATTTAGCATTGGTTACTCTAACGAATTCAGAAGTCAAATTCAGTGTTAATGATAAGGAGATAAGTCTTTACAAAGAGGTATATATATAATACAATTTAATTGAATTCTTTTTGCAATAATTATTTAAGTATTTTATAATAATGTGTGTGTGTTGTGTGTAGGTAGATGAATGTATAATTGGAGGGGTTGCAGATGAAGAAGAAAGTCGATTCTTTGTGTACCTAAATCCCAAAATACTTTTTAGAGATTTGGCAAATAAATCAGAAAGGATATGGATGTTCAAGTCTCCTAATTCCTATAGTATAATTGTTGCTCCTATTGGATTGTATGCCCAATTTTGTGTCTATTTTCCCCAACTAGAGGAAAAATCCAAGAGGCAAAGGATATGTTGATCATTTTTTTGATATTGTTGTTTTTTTTTTTCTCATAATAATAAAATTCAAAATATCAACTATTAACTA

Coding sequence (CDS)

CACAACCATGGCTTCCACTATAAAAAGGGCCAAACCCTAAAGAACGTCTTTCATAACTTCAAGATCATAGAAATTGTAATAATATTGAGGAGATCAAAAGGCCAAATGGAACTCAGGCTTGAGAACATCCATAGTTTTTCAAAAGCACTTCTCCCACTCGAGCGATTCCATGATGTAGCAGATTTAAAATGCTCACCCAAAATGTTCTCCTTAATAATCTCTCGCCATTTCCCTCTTATCATTACATCTCTTCAACTTCTTCCTCCTTACTTCACAAATTTTTTTTGTCAAAACCAAATTTTCCAATACCAAATCCCCATCAAATCTTTTTACAATATCATGAACACTATGAAACAAAGATTTTATTCTTCAATGATACTCTTTCTTCATCACCAACAACCCCTCAATCAAATCTTCCTTCAGTTTCGCAATCCAAGGGTGGTTGATGATCAAGATGTACTTTTTCATGGATTTCCATTGTCACCTTCAAGAGAGGAAGATGTAGGGGAAATTGATTATGGAATCTTTTTCTCAATTGACTCACTTGTGCTTAGATTCATTGCAACAGAGTTAGATGATTACGATGCATTGGTTACTCTAACGAATTCAGAAGTCAAATTCAGTGTTAATGATAAGGAGATAAGTCTTTACAAAGAGGTAGATGAATGTATAATTGGAGGGGTTGCAGATGAAGAAGAAAGTCGATTCTTTGTGTACCTAAATCCCAAAATACTTTTTAGAGATTTGGCAAATAAATCAGAAAGGATATGGATGTTCAAGTCTCCTAATTCCTATAGTATAATTGTTGCTCCTATTGGATTGTATGCCCAATTTTGTGTCTATTTTCCCCAACTAGAGGAAAAATCCAAGAGGCAAAGGATATGTTGA

Protein sequence

HNHGFHYKKGQTLKNVFHNFKIIEIVIILRRSKGQMELRLENIHSFSKALLPLERFHDVADLKCSPKMFSLIISRHFPLIITSLQLLPPYFTNFFCQNQIFQYQIPIKSFYNIMNTMKQRFYSSMILFLHHQQPLNQIFLQFRNPRVVDDQDVLFHGFPLSPSREEDVGEIDYGIFFSIDSLVLRFIATELDDYDALVTLTNSEVKFSVNDKEISLYKEVDECIIGGVADEEESRFFVYLNPKILFRDLANKSERIWMFKSPNSYSIIVAPIGLYAQFCVYFPQLEEKSKRQRIC

Homology

[Close]

BLAST of Cucsat.G5665 vs. NCBI nr
Match: XP_031744051.1 (uncharacterized protein LOC116404769 [Cucumis sativus])

HSP 1 Score: 365 bits (936), Expect = 9.74e-126
Identity = 184/185 (99.46%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 10  MELRLENIHSFSKALLPLERFHDVADLKCSPKMFSLIISRHFPLIITSLQLLPPYFTNFF 69
           MELRLENIHSFSKALLPLERFHDVADLKCSPKMFSLIISRHFPLIITSLQLLPPYFTNFF
Sbjct: 1   MELRLENIHSFSKALLPLERFHDVADLKCSPKMFSLIISRHFPLIITSLQLLPPYFTNFF 60

Query: 70  CQNQIFQYQIPIKSFYNIMNTMKQRFYSSMILFLHHQQPLNQIFLQFRNPRVVDDQDVLF 129
           CQNQIFQYQIPIKSFYNIMNTMKQRFYSSMILFLHHQQPLNQIFLQFRNPRVVDDQDVLF
Sbjct: 61  CQNQIFQYQIPIKSFYNIMNTMKQRFYSSMILFLHHQQPLNQIFLQFRNPRVVDDQDVLF 120

Query: 130 HGFPLSPSREEDVGEIDYGIFFSIDSLVLRFIATELDDYDALVTLTNSEVKFSVNDKEIS 189
           HGFPLSPSREEDVGEIDYGIFFSIDSLVLRFIATELDDYDALVTLTNSEVKFSVNDKEIS
Sbjct: 121 HGFPLSPSREEDVGEIDYGIFFSIDSLVLRFIATELDDYDALVTLTNSEVKFSVNDKEIS 180

Query: 190 LYKEM 194
           LYKE+
Sbjct: 181 LYKEV 185

[Close]

BLAST of Cucsat.G5665 vs. NCBI nr
Match: XP_008458677.1 (PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo])

HSP 1 Score: 309 bits (792), Expect = 8.11e-104
Identity = 156/184 (84.78%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 10  MELRLENIHSFSKALLPLERFHDVADLKCSPKMFSLIISRHFPLIITSLQLLPPYFTNFF 69
           MEL+LENIHSFSKALLPL+RF+D ADLKCSPKMFSLIISRHFPLIITSLQ+LPP+FTNF 
Sbjct: 1   MELKLENIHSFSKALLPLQRFNDTADLKCSPKMFSLIISRHFPLIITSLQILPPFFTNFL 60

Query: 70  CQNQIFQYQIPIKSFYNIMNTMKQRFYSSMILFLHHQQPLNQIFLQFRNPRVVDDQDVLF 129
           CQNQIFQ+QIPIKSFY+IMN+M  R YSSM L LH QQPL QI LQFRNPRVVDDQ+ L+
Sbjct: 61  CQNQIFQFQIPIKSFYDIMNSMTHRLYSSMTLSLHPQQPLIQIALQFRNPRVVDDQEALY 120

Query: 130 HGFPLSPSREEDVGEIDYGIFFSIDSLVLRFIATELDDYDALVTLTNSEVKFSVNDKEIS 189
           H FPLSPSREEDVGEIDYGIFFSI+SLV RFIA ELDD+DALVTLTNSEVKFSVNDK+I 
Sbjct: 121 HAFPLSPSREEDVGEIDYGIFFSIESLVFRFIAIELDDFDALVTLTNSEVKFSVNDKDII 180

Query: 190 LYKE 193
           LYKE
Sbjct: 181 LYKE 184

[Close]

BLAST of Cucsat.G5665 vs. NCBI nr
Match: KGN45641.1 (hypothetical protein Csa_005727 [Cucumis sativus])

HSP 1 Score: 191 bits (485), Expect = 1.94e-58
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 99  MILFLHHQQPLNQIFLQFRNPRVVDDQDVLFHGFPLSPSREEDVGEIDYGIFFSIDSLVL 158
           MILFLHHQQPLNQIFLQFRNPRVVDDQDVLFHGFPLSPSREEDVGEIDYGIFFSIDSLVL
Sbjct: 1   MILFLHHQQPLNQIFLQFRNPRVVDDQDVLFHGFPLSPSREEDVGEIDYGIFFSIDSLVL 60

Query: 159 RFIATELDDYDALVTLTNSEVKFSVNDKEISLYKEM 194
           RFIATELDDYDALVTLTNSEVKFSVNDKEISLYKE+
Sbjct: 61  RFIATELDDYDALVTLTNSEVKFSVNDKEISLYKEV 96

[Close]

BLAST of Cucsat.G5665 vs. NCBI nr
Match: TYK03000.1 (uncharacterized protein E5676_scaffold46G00940 [Cucumis melo var. makuwa])

HSP 1 Score: 117 bits (294), Expect = 8.41e-31
Identity = 58/71 (81.69%), Postives = 62/71 (87.32%), Query Frame = 0


Query: 99  MILFLHHQQPLNQIFLQFRNPRVVDDQDVLFHGFPLSPSREEDVGEIDYGIFFSIDSLVL 158
           M L LH QQPL QI LQFRNPRVVDDQ+ L+H FPLSPSREEDVGEIDYGIFFSI+SLV 
Sbjct: 1   MTLSLHPQQPLIQIALQFRNPRVVDDQEALYHAFPLSPSREEDVGEIDYGIFFSIESLVF 60

Query: 159 RFIATELDDYD 169
           RFIA ELDD+D
Sbjct: 61  RFIAIELDDFD 71

[Close]

BLAST of Cucsat.G5665 vs. NCBI nr
Match: XP_023000631.1 (uncharacterized protein LOC111494875 [Cucurbita maxima])

HSP 1 Score: 99.8 bits (247), Expect = 1.41e-22
Identity = 60/106 (56.60%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 88  MNTMKQRFYSSMILFLHHQQPLNQIFLQFRNPRVVDDQDVLFHGFPLSPSREEDVGEIDY 147
           M  MK+  Y+S+ L L +   LNQ+ LQF N R+ ++Q        L PSRE+DVGEIDY
Sbjct: 1   MKAMKRILYTSITLSLRNS--LNQMLLQFHNSRIGEEQ---VRQLSLLPSREKDVGEIDY 60

Query: 148 GIFFSIDSLVLRFIATELDDYDALVTLTNSEVKFSVNDKEISLYKE 193
           GIF SIDS V   IAT+L+D +ALVTLTNS+VKFSV  KEISL +E
Sbjct: 61  GIFVSIDSEVFERIATDLNDSNALVTLTNSQVKFSVEAKEISLVEE 101

[Close]

BLAST of Cucsat.G5665 vs. ExPASy TrEMBL
Match: A0A1S3C8E9 (uncharacterized protein LOC103498005 OS=Cucumis melo OX=3656 GN=LOC103498005 PE=4 SV=1)

HSP 1 Score: 309 bits (792), Expect = 3.93e-104
Identity = 156/184 (84.78%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 10  MELRLENIHSFSKALLPLERFHDVADLKCSPKMFSLIISRHFPLIITSLQLLPPYFTNFF 69
           MEL+LENIHSFSKALLPL+RF+D ADLKCSPKMFSLIISRHFPLIITSLQ+LPP+FTNF 
Sbjct: 1   MELKLENIHSFSKALLPLQRFNDTADLKCSPKMFSLIISRHFPLIITSLQILPPFFTNFL 60

Query: 70  CQNQIFQYQIPIKSFYNIMNTMKQRFYSSMILFLHHQQPLNQIFLQFRNPRVVDDQDVLF 129
           CQNQIFQ+QIPIKSFY+IMN+M  R YSSM L LH QQPL QI LQFRNPRVVDDQ+ L+
Sbjct: 61  CQNQIFQFQIPIKSFYDIMNSMTHRLYSSMTLSLHPQQPLIQIALQFRNPRVVDDQEALY 120

Query: 130 HGFPLSPSREEDVGEIDYGIFFSIDSLVLRFIATELDDYDALVTLTNSEVKFSVNDKEIS 189
           H FPLSPSREEDVGEIDYGIFFSI+SLV RFIA ELDD+DALVTLTNSEVKFSVNDK+I 
Sbjct: 121 HAFPLSPSREEDVGEIDYGIFFSIESLVFRFIAIELDDFDALVTLTNSEVKFSVNDKDII 180

Query: 190 LYKE 193
           LYKE
Sbjct: 181 LYKE 184

[Close]

BLAST of Cucsat.G5665 vs. ExPASy TrEMBL
Match: A0A0A0KCY3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002350 PE=4 SV=1)

HSP 1 Score: 191 bits (485), Expect = 9.40e-59
Identity = 95/96 (98.96%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 99  MILFLHHQQPLNQIFLQFRNPRVVDDQDVLFHGFPLSPSREEDVGEIDYGIFFSIDSLVL 158
           MILFLHHQQPLNQIFLQFRNPRVVDDQDVLFHGFPLSPSREEDVGEIDYGIFFSIDSLVL
Sbjct: 1   MILFLHHQQPLNQIFLQFRNPRVVDDQDVLFHGFPLSPSREEDVGEIDYGIFFSIDSLVL 60

Query: 159 RFIATELDDYDALVTLTNSEVKFSVNDKEISLYKEM 194
           RFIATELDDYDALVTLTNSEVKFSVNDKEISLYKE+
Sbjct: 61  RFIATELDDYDALVTLTNSEVKFSVNDKEISLYKEV 96

[Close]

BLAST of Cucsat.G5665 vs. ExPASy TrEMBL
Match: A0A5D3BV61 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00940 PE=4 SV=1)

HSP 1 Score: 117 bits (294), Expect = 4.07e-31
Identity = 58/71 (81.69%), Postives = 62/71 (87.32%), Query Frame = 0


Query: 99  MILFLHHQQPLNQIFLQFRNPRVVDDQDVLFHGFPLSPSREEDVGEIDYGIFFSIDSLVL 158
           M L LH QQPL QI LQFRNPRVVDDQ+ L+H FPLSPSREEDVGEIDYGIFFSI+SLV 
Sbjct: 1   MTLSLHPQQPLIQIALQFRNPRVVDDQEALYHAFPLSPSREEDVGEIDYGIFFSIESLVF 60

Query: 159 RFIATELDDYD 169
           RFIA ELDD+D
Sbjct: 61  RFIAIELDDFD 71

[Close]

BLAST of Cucsat.G5665 vs. ExPASy TrEMBL
Match: A0A6J1KGC4 (uncharacterized protein LOC111494875 OS=Cucurbita maxima OX=3661 GN=LOC111494875 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.85e-23
Identity = 60/106 (56.60%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 88  MNTMKQRFYSSMILFLHHQQPLNQIFLQFRNPRVVDDQDVLFHGFPLSPSREEDVGEIDY 147
           M  MK+  Y+S+ L L +   LNQ+ LQF N R+ ++Q        L PSRE+DVGEIDY
Sbjct: 1   MKAMKRILYTSITLSLRNS--LNQMLLQFHNSRIGEEQ---VRQLSLLPSREKDVGEIDY 60

Query: 148 GIFFSIDSLVLRFIATELDDYDALVTLTNSEVKFSVNDKEISLYKE 193
           GIF SIDS V   IAT+L+D +ALVTLTNS+VKFSV  KEISL +E
Sbjct: 61  GIFVSIDSEVFERIATDLNDSNALVTLTNSQVKFSVEAKEISLVEE 101

[Close]

BLAST of Cucsat.G5665 vs. ExPASy TrEMBL
Match: A0A6J1HM25 (uncharacterized protein LOC111464210 OS=Cucurbita moschata OX=3662 GN=LOC111464210 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 6.85e-23
Identity = 60/106 (56.60%), Postives = 74/106 (69.81%), Query Frame = 0


Query: 88  MNTMKQRFYSSMILFLHHQQPLNQIFLQFRNPRVVDDQDVLFHGFPLSPSREEDVGEIDY 147
           M  MK+  Y+S+ L L +   LNQ+ LQF N R+ ++Q        L PSRE+DVGEIDY
Sbjct: 1   MKAMKRILYTSITLSLRNS--LNQMLLQFHNSRIGEEQ---VRQLSLLPSREKDVGEIDY 60

Query: 148 GIFFSIDSLVLRFIATELDDYDALVTLTNSEVKFSVNDKEISLYKE 193
           GIF SIDS V   IAT+L+D +ALVTLTNS+VKFSV  KEISL +E
Sbjct: 61  GIFVSIDSEVFERIATDLNDSNALVTLTNSQVKFSVEAKEISLVEE 101

The following BLAST results are available for this feature:

BLAST of Cucsat.G5665 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G5665 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031744051.1	9.74e-126	99.46	uncharacterized protein LOC116404769 [Cucumis sativus]	[more]
XP_008458677.1	8.11e-104	84.78	PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo]	[more]
KGN45641.1	1.94e-58	98.96	hypothetical protein Csa_005727 [Cucumis sativus]	[more]
TYK03000.1	8.41e-31	81.69	uncharacterized protein E5676_scaffold46G00940 [Cucumis melo var. makuwa]	[more]
XP_023000631.1	1.41e-22	56.60	uncharacterized protein LOC111494875 [Cucurbita maxima]	[more]

BLAST of Cucsat.G5665 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C8E9	3.93e-104	84.78	uncharacterized protein LOC103498005 OS=Cucumis melo OX=3656 GN=LOC103498005 PE=...	[more]
A0A0A0KCY3	9.40e-59	98.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002350 PE=4 SV=1	[more]
A0A5D3BV61	4.07e-31	81.69	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1KGC4	6.85e-23	56.60	uncharacterized protein LOC111494875 OS=Cucurbita maxima OX=3661 GN=LOC111494875...	[more]
A0A6J1HM25	6.85e-23	56.60	uncharacterized protein LOC111464210 OS=Cucurbita moschata OX=3662 GN=LOC1114642...	[more]

BLAST of Cucsat.G5665 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.70.10.10		coord: 36..287 e-value: 9.1E-11 score: 43.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G5665.T1	Cucsat.G5665.T1	mRNA
Cucsat.G5665.T2	Cucsat.G5665.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane