Cucsat.G5363 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G5363
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	ATP-dependent DNA helicase
Location	ctg1267: 213509 .. 218078 (-)
RNA-Seq Expression	Cucsat.G5363
Synteny	Cucsat.G5363

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAACTAATTTCTAATGGTAGGTGAAGGAACTTGAATTGCCTTTATTTAGATGGGGATTTAGCCAAAAGTACTTGAGCATTGTAGGGTTTCTTTTTGTCATACTCAGGCAGTGTCTTAAATGCAACATTCCTAACTAAAGTACTTGAAAAACTGAAGCATTTCCCTAAAACGGGTACTTGAGTTTTCCTCTGAGTTAACTAATCGGAAGAAAATGAGGTACATTGTTCATAAAATCAAACTCCACTGTTTTCTTCGTCAAACTTACAAAACAGAACTTGAGTTGTTATAGCAGGCTTTAACTTACAAATCCAGTGTTCATTGATCATATATTAGTATAATTTTGTTTTACTTGTTGCTGGAAATGCTTGTCTTGTTTCTTTTTGTACCGATAAGAACTACTTCATTATTTCTGAATTGTGTGTTTAACGTATTGTGTAAATTGTATTGTGCAGGCTATTTGACAGAGAACATACGCGATGTTTACAGAACCATAGGGTCATCAACTTTCACCCAATCTTTTACTTCTGCATCTTAACCTTAGAGTTTTACAGTTATCTATCCATTTTCAAATTTTATCAATAGGAAAGCTAATACTTTTTTGTAAACATCTACTCTCCTGTCCACCCAATCAATCTTATTTTCTTCGAATTATTTGAAACTGAAACTGACAATTAGAATAATCCTTCCTTCTTAACAATAGTATCAGTGCAAAAGGGGAACAATTTCTCGATTCTGCCAGACAGGACTGCCAACCACCTCTAGTTTTGCCAGTGACGAGTGAAATGATTGGTGAGAATGAAGATGACAGTGCATTAATTGAAGCTGGGAAAATGGATAACTTGGCCACTTTCAAGAGTGGACTTTCAGAGGTTTGCTTGTTAAATACTAATTGCCTTCTAATGCCTTGGTTATGTATATTATTTTACCTGTTTTCTATTGTCAACGTCAAAGGATTGAGATAGTTATTTTCTGAAAGCAGTTTAGTTGCACATGAATTATATTGAATACTCGTGGTTTTGGTTATTAAAAGTGTTATATGACAATAGTTGTCATTATTTGTTATATTCGGTTTGATTGTACTTTGAGTTTAAGCTTTTCAGTTCATCAATGAAAAACCTTGTTTTCGTCTAAAAAAATTTGTTATATCTATCGCTCCAATTAATTTTTCCGGCTGGTGTCATATCCTGCTGCATACTTGTCTCTGAATGAGTATATTGTGTGCCGTGAGGCCTTTTTATTAACTTAATAAATCCTTCTTGTCTTGCTCATCTGTTTATGCATTGTTCTTTTGCGCGTGAATTTTGTAATAACTTCTTGGATGCTTTTGGACAGTTGACTACACATTCTAACCATATTTAGTATATACTTGACTCTCTTTTGGTGGGACACCCTTTTTTGGTAACAAAAAGATGATTTGGCGGGCTATTCTTCATTCTTTCTTCTAGACTTTAATGGGCAAGCATAATAAGCGTCTCTTTCAGGATTCTGCTTTCTCTTTTAATGTTTTTTTGTCTCGTGTTCCTTACAACCTTTTACTGGTGAAAAATTGGGCACCCTTTCAATAACTTTAGTCTCTCTTACTTCGTTTCCAATTGGTGCTCTTTTTGTAATCACCTTTAGGTGCTTTGGGTCTTCCCATATTTCATTTTATCAATATAATGTTCCTTATATAAAAAAAAAAAACAAAATCCTTCTTGTCTTGCTATTCTTTTTATTTGTTTATTTATTGTATTTTTTGGCCTTTCTTTTATTTTACCACCGGCTATTTGTACGATGTTTGATTACATAATTAAATGGAAGACAAATTGGGTAAACCATTGCATTTCCTTCCTTGTTTTTACCTATCTGAGTCTTATATTTTGATTGTTCCATTTGAATTTACTTCCAGGCTGAGGAAAAACTTTTTCAGTTGCTTTTAGAAGAGAGAATGAAGCTTGCTAGAAGTGCTGGAACTGCTCCGTAGGTTCTGCAGATACTTATTACGAAAAATGACATTTTACCCCAAATATCATGCATTTGTTTGTATGTATGTGGTTTATATGGAAAACCTTTCTTGCCTATTATCTTGCATTTCTTCTTATATGCAGGTATGCCATATGTGGTGATCAAACAGTTAAAAGAATTGCGCTGACTAGACCATCTACTAAGGCAAGATTAGCAAATATTGATGGTGTCAACCAGGTATATCCTTCAGGATTATACGATTACATATAACTTTATAATGGGGTTGAAGCGAAGTCATTAACATTGTATTTATCTATGCTTGTTTGACATGGATTTCGTACTTGAATGTCACCACCTCTTACATGTGCTAATTTGCAATAAATTGCTCTCAAATTTCAATGCATTTTTATCAATATTTTGTATGATCCACTCCGTACATCTGCACTCAGAGTTTGATTCCATGATCTTGCACCTTCAGGCTTTAGTTATTAGATTCTAACTAGCCAAAGTTGTGAGATTGTTATATGCTCTGTCCTGAAATGATTGTTAGACAATTCAATAATGGTACAGCATCTGCTAAAAATGCACGGAGATCTAATTCTTGAAGCAGTCAAGCGTCTATCACAACAAGTCAGTCTATCACTGGATGGCGAATATAGAGAAGAAGGAAATGGACAAGGTACTACAATGAGAAAACTCTATACAGAACCAAACCAACGACGACCCTTGGCTCCAGCAAAGTTTGAAGCTTGGAAAATGTGGCATGAAGATGGTCTTTCAATACAGAAAATTGCTGTAAGTATTTTGTTTTTTTGACTTTTTGAAGTTATTGAGAGAAAAAGGCTTATGAAGATGAACATAACAGAATGGCAATTTAGAAGCTTATTCACATGGAACTTCACCCTTGTATATAAATAAGTCTGAAAAAAAACACTTTGAATCAGTTTAGACTGCAAATATTTCAACTCTGGAATGCTCAGAATTTAAATACTTTTCACCTGAAAGAAGTTTACTTGCTGAAAAAACAAACTTCTTGAGTTGTTTTGGCTTTTCAGAGTTACGGTCTTTTTTTTAGAAGCACAGTGTGTTTAGAATTTTTGAAATCACATCTGTTTATTGTAAATCAAACACCATATGACTTTTGAACAATGCTTTTAATTGGAAATGAAATGCACTTTTTACCATTCTAGAAATTATATTAGCCTCGCCCTTACCATGTTCAGTGCATGTCTGGAGTGATATTGAAATTGCTAAAATCACTATTAGCATGTTCAAAATCAATATGAAACTCGCCTTGAAGCATGATAAATCGATTTATTGTTTAATTCTACACTCTTGAATTCAATCTTTTATATTATCAAAACTGATTTGAATGATTAAAAGAACATGTTTTAGAGTGAGTTTGAAAATAACAATGATTTTAACCAATTTAAAATCACTCATTTTATGTTAAACGTTGGCAGATATTTCTCTTTTCCCATTAATTGGCCTTATTCTGATATATCATTATTTATTTTGAAAATAGAACTTCCCTGGTAGATTGGCACCTATCAAAGAAACTACTGTTTTTGGGTATATTGTTGATGCAGTCCAGGAAGGATATGAAATCGACTGGACCAAGTTTTGTGATGAGATAGGACTTACATGTCAGATATTCTCCGACATTCAATCTGCTGTCACAAAGGTTGGATCTGCTGAGAAGTTGAAGGCGATAAAAGATGAATTACCAGAAGAAGTAAGTTGGATATTGTAAAATATGCCTTCTGTTTCTTAGACTTTAGTCCTCCATTGTTTCTTTTATGCATATACTTTTCAGTTTTTCAGTCTAATGCTCCATCGTCTGTATATGACTGGAAATTGATATTTGGATGACAGATAAATTATGCTCACATCAAGGCTTGTCTGGTAATGCAAAGTCGTGGAATGTCCCCGGAAGGCCTGGATAGAAAAACCGACGAACCAATGACTGGTGCATCAGTGCTTTCAGGGAGTCCAACTTCGATTCAGAAGAAAGAAGAGCCTTGTGTAATTGAAACACCATCAAATGGAGAAGAGGAAATTTCCGTTTCGTTAAAGCGCCAGAAAGTTTGTGAATTGGAGGAAGAACATCGGGTTCCGATAAAAGCAACCGAGAGCTTGCTAGTAGAGTGGCTGAAGAACAATGATGGGGTAAGTGAAATGAAGTCTGAAATATGTATCATTTTTTGCTTCTTATACTAATCTTTCCAAGCGCTCTTTGAAGTTCACCATAGTATGGTTTAAATGAAGAAGAATGCAATATGGCTTTTTGATAATGCAGGTAACACTTGACAATATGATGAAGCAGTTTAAACTTAAAGGATGTGAAGAAGAATCTCTAGTTGCTTTGCTTAATTCCCTTGAAGGCGATTTTGTGATATATAAAAAGAACAATATCTATAAGCTCATGTAAGCTCTAAAGCGTAACTATAAAACTCCCTAATTTTGTGTATAGGAATTTGGGAATAGGATTAAACCAAATCCAAGGTATTGGCGCATTCATTTGCCAGCTTTTCAAAGTAGAAGTAGTTTGTGTGGAAATAGCTTCCTAACAAATTTTGAATTTTATTCATTAATATTCATTTTAATTTTTATATCAAAATTTTAAATTAGT

Coding sequence (CDS)

CAACTAATTTCTAATGGCTATTTGACAGAGAACATACGCGATGTTTACAGAACCATAGGTATCAGTGCAAAAGGGGAACAATTTCTCGATTCTGCCAGACAGGACTGCCAACCACCTCTAGTTTTGCCAGTGACGAGTGAAATGATTGGTGAGAATGAAGATGACAGTGCATTAATTGAAGCTGGGAAAATGGATAACTTGGCCACTTTCAAGAGTGGACTTTCAGAGGCTGAGGAAAAACTTTTTCAGTTGCTTTTAGAAGAGAGAATGAAGCTTGCTAGAAGTGCTGGAACTGCTCCGTATGCCATATGTGGTGATCAAACAGTTAAAAGAATTGCGCTGACTAGACCATCTACTAAGGCAAGATTAGCAAATATTGATGGTGTCAACCAGCATCTGCTAAAAATGCACGGAGATCTAATTCTTGAAGCAGTCAAGCGTCTATCACAACAAGTCAGTCTATCACTGGATGGCGAATATAGAGAAGAAGGAAATGGACAAGGTACTACAATGAGAAAACTCTATACAGAACCAAACCAACGACGACCCTTGGCTCCAGCAAAGTTTGAAGCTTGGAAAATGTGGCATGAAGATGGTCTTTCAATACAGAAAATTGCTAACTTCCCTGGTAGATTGGCACCTATCAAAGAAACTACTGTTTTTGGGTATATTGTTGATGCAGTCCAGGAAGGATATGAAATCGACTGGACCAAGTTTTGTGATGAGATAGGACTTACATGTCAGATATTCTCCGACATTCAATCTGCTGTCACAAAGGTTGGATCTGCTGAGAAGTTGAAGGCGATAAAAGATGAATTACCAGAAGAAATAAATTATGCTCACATCAAGGCTTGTCTGGTAATGCAAAGTCGTGGAATGTCCCCGGAAGGCCTGGATAGAAAAACCGACGAACCAATGACTGGTGCATCAGTGCTTTCAGGGAGTCCAACTTCGATTCAGAAGAAAGAAGAGCCTTGTGTAATTGAAACACCATCAAATGGAGAAGAGGAAATTTCCGTTTCGTTAAAGCGCCAGAAAGTTTGTGAATTGGAGGAAGAACATCGGGTTCCGATAAAAGCAACCGAGAGCTTGCTAGTAGAGTGGCTGAAGAACAATGATGGGGTAACACTTGACAATATGATGAAGCAGTTTAAACTTAAAGGATGTGAAGAAGAATCTCTAGTTGCTTTGCTTAATTCCCTTGAAGGCGATTTTGTGATATATAAAAAGAACAATATCTATAAGCTCATGTAA

Protein sequence

QLISNGYLTENIRDVYRTIGISAKGEQFLDSARQDCQPPLVLPVTSEMIGENEDDSALIEAGKMDNLATFKSGLSEAEEKLFQLLLEERMKLARSAGTAPYAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGEYREEGNGQGTTMRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTVFGYIVDAVQEGYEIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYAHIKACLVMQSRGMSPEGLDRKTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISVSLKRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNSLEGDFVIYKKNNIYKLM

Homology

[Close]

BLAST of Cucsat.G5363 vs. NCBI nr
Match: XP_011653463.2 (uncharacterized protein LOC101222028 [Cucumis sativus] >KGN53928.2 hypothetical protein Csa_019113 [Cucumis sativus])

HSP 1 Score: 634 bits (1635), Expect = 3.04e-220
Identity = 317/317 (100.00%), Postives = 317/317 (100.00%), Query Frame = 0


Query: 27  YAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGEY 86
           YAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGEY
Sbjct: 568 YAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGEY 627

Query: 87  REEGNGQGTTMRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTV 146
           REEGNGQGTTMRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTV
Sbjct: 628 REEGNGQGTTMRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTV 687

Query: 147 FGYIVDAVQEGYEIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYA 206
           FGYIVDAVQEGYEIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYA
Sbjct: 688 FGYIVDAVQEGYEIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYA 747

Query: 207 HIKACLVMQSRGMSPEGLDRKTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISV 266
           HIKACLVMQSRGMSPEGLDRKTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISV
Sbjct: 748 HIKACLVMQSRGMSPEGLDRKTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISV 807

Query: 267 SLKRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNS 326
           SLKRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNS
Sbjct: 808 SLKRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNS 867

Query: 327 LEGDFVIYKKNNIYKLM 343
           LEGDFVIYKKNNIYKLM
Sbjct: 868 LEGDFVIYKKNNIYKLM 884

[Close]

BLAST of Cucsat.G5363 vs. NCBI nr
Match: XP_008442016.1 (PREDICTED: ATP-dependent DNA helicase RecQ-like isoform X2 [Cucumis melo])

HSP 1 Score: 583 bits (1504), Expect = 3.73e-202
Identity = 295/317 (93.06%), Postives = 305/317 (96.21%), Query Frame = 0


Query: 27  YAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGEY 86
           YA+CGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVK LSQQVSLSLDGEY
Sbjct: 444 YAVCGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKLLSQQVSLSLDGEY 503

Query: 87  REEGNGQGTTMRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTV 146
           REEGNGQGTT RKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGR APIKETTV
Sbjct: 504 REEGNGQGTTTRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTV 563

Query: 147 FGYIVDAVQEGYEIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYA 206
            GYIVDAVQEGYEIDWTKFC+EIGLTC+IFS+IQSAVTKVGSAEKLKAIKDELPEEINYA
Sbjct: 564 CGYIVDAVQEGYEIDWTKFCNEIGLTCRIFSNIQSAVTKVGSAEKLKAIKDELPEEINYA 623

Query: 207 HIKACLVMQSRGMSPEGLDRKTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISV 266
           HIKACLVMQS GMSPEGLDRKTDEPM GAS+LSGSPTSI+KKEEPCVIETPSNGEEEISV
Sbjct: 624 HIKACLVMQSCGMSPEGLDRKTDEPMIGASLLSGSPTSIKKKEEPCVIETPSNGEEEISV 683

Query: 267 SLKRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNS 326
           SLKRQKV E EEE +VP+KATESLL+EWLKNNDGVTLDNMM+QFK  G EEESLVALLNS
Sbjct: 684 SLKRQKVRESEEERQVPVKATESLLIEWLKNNDGVTLDNMMEQFK--GSEEESLVALLNS 743

Query: 327 LEGDFVIYKKNNIYKLM 343
           LEGDFVIYKKNNIYKLM
Sbjct: 744 LEGDFVIYKKNNIYKLM 758

[Close]

BLAST of Cucsat.G5363 vs. NCBI nr
Match: XP_008442015.1 (PREDICTED: ATP-dependent DNA helicase RecQ-like isoform X1 [Cucumis melo])

HSP 1 Score: 583 bits (1504), Expect = 1.76e-200
Identity = 295/317 (93.06%), Postives = 305/317 (96.21%), Query Frame = 0


Query: 27  YAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGEY 86
           YA+CGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVK LSQQVSLSLDGEY
Sbjct: 568 YAVCGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKLLSQQVSLSLDGEY 627

Query: 87  REEGNGQGTTMRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTV 146
           REEGNGQGTT RKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGR APIKETTV
Sbjct: 628 REEGNGQGTTTRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTV 687

Query: 147 FGYIVDAVQEGYEIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYA 206
            GYIVDAVQEGYEIDWTKFC+EIGLTC+IFS+IQSAVTKVGSAEKLKAIKDELPEEINYA
Sbjct: 688 CGYIVDAVQEGYEIDWTKFCNEIGLTCRIFSNIQSAVTKVGSAEKLKAIKDELPEEINYA 747

Query: 207 HIKACLVMQSRGMSPEGLDRKTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISV 266
           HIKACLVMQS GMSPEGLDRKTDEPM GAS+LSGSPTSI+KKEEPCVIETPSNGEEEISV
Sbjct: 748 HIKACLVMQSCGMSPEGLDRKTDEPMIGASLLSGSPTSIKKKEEPCVIETPSNGEEEISV 807

Query: 267 SLKRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNS 326
           SLKRQKV E EEE +VP+KATESLL+EWLKNNDGVTLDNMM+QFK  G EEESLVALLNS
Sbjct: 808 SLKRQKVRESEEERQVPVKATESLLIEWLKNNDGVTLDNMMEQFK--GSEEESLVALLNS 867

Query: 327 LEGDFVIYKKNNIYKLM 343
           LEGDFVIYKKNNIYKLM
Sbjct: 868 LEGDFVIYKKNNIYKLM 882

[Close]

BLAST of Cucsat.G5363 vs. NCBI nr
Match: KAA0041766.1 (ATP-dependent DNA helicase RecQ-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 556 bits (1434), Expect = 1.03e-191
Identity = 281/305 (92.13%), Postives = 293/305 (96.07%), Query Frame = 0


Query: 27  YAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGEY 86
           YA+CGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVK LSQQVSLSLDGEY
Sbjct: 444 YAVCGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKLLSQQVSLSLDGEY 503

Query: 87  REEGNGQGTTMRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTV 146
           REEGNGQGTT RKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGR APIKETTV
Sbjct: 504 REEGNGQGTTTRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTV 563

Query: 147 FGYIVDAVQEGYEIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYA 206
            GYIVDAVQEGYEIDWTKFC+EIGLTC+IFS+IQSAVTKVGSAEKLKAIKDELPEEINYA
Sbjct: 564 CGYIVDAVQEGYEIDWTKFCNEIGLTCRIFSNIQSAVTKVGSAEKLKAIKDELPEEINYA 623

Query: 207 HIKACLVMQSRGMSPEGLDRKTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISV 266
           HIKACLVMQS GMSPEGLDRKTDEPM GAS+LSGSPTSI+KKEEPCVIETPSNGEEEISV
Sbjct: 624 HIKACLVMQSCGMSPEGLDRKTDEPMIGASLLSGSPTSIKKKEEPCVIETPSNGEEEISV 683

Query: 267 SLKRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNS 326
           SLKRQKV E EEE +VP+KATESLL+EWLKNNDGVTLDNMM+QFK  G EEESLVALLNS
Sbjct: 684 SLKRQKVRESEEERQVPVKATESLLIEWLKNNDGVTLDNMMEQFK--GSEEESLVALLNS 743

Query: 327 LEGDF 331
           LEG++
Sbjct: 744 LEGNW 746

[Close]

BLAST of Cucsat.G5363 vs. NCBI nr
Match: XP_038883532.1 (ATP-dependent DNA helicase RecQ-like [Benincasa hispida])

HSP 1 Score: 558 bits (1437), Expect = 2.77e-190
Identity = 282/323 (87.31%), Postives = 297/323 (91.95%), Query Frame = 0


Query: 27  YAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGEY 86
           YAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLIL+AVKRLSQ+V LSLDGEY
Sbjct: 569 YAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILQAVKRLSQEVGLSLDGEY 628

Query: 87  REEGNGQGTTMRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTV 146
           +EEGNGQGTT RK YTE NQ RPLAPAKFEAWKMWHEDGLSIQKIANFPGR APIKETTV
Sbjct: 629 KEEGNGQGTTTRKPYTESNQWRPLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTV 688

Query: 147 FGYIVDAVQEGYEIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYA 206
            GYI+DAVQEGY IDWTKFCDEIGLTC+IFS++QSA+ KVGSAEKLKAIKDELPEEINYA
Sbjct: 689 SGYILDAVQEGYAIDWTKFCDEIGLTCRIFSNVQSAIMKVGSAEKLKAIKDELPEEINYA 748

Query: 207 HIKACLVMQSRGMSPEGL------DRKTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNG 266
           HIKACLVMQS GMSPEGL      DRKTDEPM G S  SGSPTS+ KKEEPC+ ETPSNG
Sbjct: 749 HIKACLVMQSCGMSPEGLLTGSHQDRKTDEPMNGTSSFSGSPTSLPKKEEPCITETPSNG 808

Query: 267 EEEISVSLKRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESL 326
           EEEISVSLKRQKVCELEEE RVP+KATESLLVEWLKNNDGVTL+N+++QFK  G EEESL
Sbjct: 809 EEEISVSLKRQKVCELEEERRVPVKATESLLVEWLKNNDGVTLNNIIEQFK--GSEEESL 868

Query: 327 VALLNSLEGDFVIYKKNNIYKLM 343
           VALLNSLEGDFVIYKKNNIYKLM
Sbjct: 869 VALLNSLEGDFVIYKKNNIYKLM 889

[Close]

BLAST of Cucsat.G5363 vs. ExPASy TrEMBL
Match: A0A0A0L1A4 (ATP-dependent DNA helicase OS=Cucumis sativus OX=3659 GN=Csa_4G188732 PE=3 SV=1)

HSP 1 Score: 634 bits (1636), Expect = 6.19e-224
Identity = 317/318 (99.69%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 26  RYAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGE 85
           +YAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGE
Sbjct: 340 QYAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGE 399

Query: 86  YREEGNGQGTTMRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETT 145
           YREEGNGQGTTMRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETT
Sbjct: 400 YREEGNGQGTTMRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETT 459

Query: 146 VFGYIVDAVQEGYEIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINY 205
           VFGYIVDAVQEGYEIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINY
Sbjct: 460 VFGYIVDAVQEGYEIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINY 519

Query: 206 AHIKACLVMQSRGMSPEGLDRKTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEIS 265
           AHIKACLVMQSRGMSPEGLDRKTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEIS
Sbjct: 520 AHIKACLVMQSRGMSPEGLDRKTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEIS 579

Query: 266 VSLKRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLN 325
           VSLKRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLN
Sbjct: 580 VSLKRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLN 639

Query: 326 SLEGDFVIYKKNNIYKLM 343
           SLEGDFVIYKKNNIYKLM
Sbjct: 640 SLEGDFVIYKKNNIYKLM 657

[Close]

BLAST of Cucsat.G5363 vs. ExPASy TrEMBL
Match: A0A1S3B4R4 (ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103486004 PE=3 SV=1)

HSP 1 Score: 583 bits (1504), Expect = 1.80e-202
Identity = 295/317 (93.06%), Postives = 305/317 (96.21%), Query Frame = 0


Query: 27  YAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGEY 86
           YA+CGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVK LSQQVSLSLDGEY
Sbjct: 444 YAVCGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKLLSQQVSLSLDGEY 503

Query: 87  REEGNGQGTTMRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTV 146
           REEGNGQGTT RKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGR APIKETTV
Sbjct: 504 REEGNGQGTTTRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTV 563

Query: 147 FGYIVDAVQEGYEIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYA 206
            GYIVDAVQEGYEIDWTKFC+EIGLTC+IFS+IQSAVTKVGSAEKLKAIKDELPEEINYA
Sbjct: 564 CGYIVDAVQEGYEIDWTKFCNEIGLTCRIFSNIQSAVTKVGSAEKLKAIKDELPEEINYA 623

Query: 207 HIKACLVMQSRGMSPEGLDRKTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISV 266
           HIKACLVMQS GMSPEGLDRKTDEPM GAS+LSGSPTSI+KKEEPCVIETPSNGEEEISV
Sbjct: 624 HIKACLVMQSCGMSPEGLDRKTDEPMIGASLLSGSPTSIKKKEEPCVIETPSNGEEEISV 683

Query: 267 SLKRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNS 326
           SLKRQKV E EEE +VP+KATESLL+EWLKNNDGVTLDNMM+QFK  G EEESLVALLNS
Sbjct: 684 SLKRQKVRESEEERQVPVKATESLLIEWLKNNDGVTLDNMMEQFK--GSEEESLVALLNS 743

Query: 327 LEGDFVIYKKNNIYKLM 343
           LEGDFVIYKKNNIYKLM
Sbjct: 744 LEGDFVIYKKNNIYKLM 758

[Close]

BLAST of Cucsat.G5363 vs. ExPASy TrEMBL
Match: A0A1S3B4Q2 (ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103486004 PE=3 SV=1)

HSP 1 Score: 583 bits (1504), Expect = 8.53e-201
Identity = 295/317 (93.06%), Postives = 305/317 (96.21%), Query Frame = 0


Query: 27  YAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGEY 86
           YA+CGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVK LSQQVSLSLDGEY
Sbjct: 568 YAVCGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKLLSQQVSLSLDGEY 627

Query: 87  REEGNGQGTTMRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTV 146
           REEGNGQGTT RKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGR APIKETTV
Sbjct: 628 REEGNGQGTTTRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTV 687

Query: 147 FGYIVDAVQEGYEIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYA 206
            GYIVDAVQEGYEIDWTKFC+EIGLTC+IFS+IQSAVTKVGSAEKLKAIKDELPEEINYA
Sbjct: 688 CGYIVDAVQEGYEIDWTKFCNEIGLTCRIFSNIQSAVTKVGSAEKLKAIKDELPEEINYA 747

Query: 207 HIKACLVMQSRGMSPEGLDRKTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISV 266
           HIKACLVMQS GMSPEGLDRKTDEPM GAS+LSGSPTSI+KKEEPCVIETPSNGEEEISV
Sbjct: 748 HIKACLVMQSCGMSPEGLDRKTDEPMIGASLLSGSPTSIKKKEEPCVIETPSNGEEEISV 807

Query: 267 SLKRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNS 326
           SLKRQKV E EEE +VP+KATESLL+EWLKNNDGVTLDNMM+QFK  G EEESLVALLNS
Sbjct: 808 SLKRQKVRESEEERQVPVKATESLLIEWLKNNDGVTLDNMMEQFK--GSEEESLVALLNS 867

Query: 327 LEGDFVIYKKNNIYKLM 343
           LEGDFVIYKKNNIYKLM
Sbjct: 868 LEGDFVIYKKNNIYKLM 882

[Close]

BLAST of Cucsat.G5363 vs. ExPASy TrEMBL
Match: A0A5A7TI77 (ATP-dependent DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G001150 PE=3 SV=1)

HSP 1 Score: 556 bits (1434), Expect = 4.97e-192
Identity = 281/305 (92.13%), Postives = 293/305 (96.07%), Query Frame = 0


Query: 27  YAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGEY 86
           YA+CGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVK LSQQVSLSLDGEY
Sbjct: 444 YAVCGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKLLSQQVSLSLDGEY 503

Query: 87  REEGNGQGTTMRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTV 146
           REEGNGQGTT RKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGR APIKETTV
Sbjct: 504 REEGNGQGTTTRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRSAPIKETTV 563

Query: 147 FGYIVDAVQEGYEIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYA 206
            GYIVDAVQEGYEIDWTKFC+EIGLTC+IFS+IQSAVTKVGSAEKLKAIKDELPEEINYA
Sbjct: 564 CGYIVDAVQEGYEIDWTKFCNEIGLTCRIFSNIQSAVTKVGSAEKLKAIKDELPEEINYA 623

Query: 207 HIKACLVMQSRGMSPEGLDRKTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEEISV 266
           HIKACLVMQS GMSPEGLDRKTDEPM GAS+LSGSPTSI+KKEEPCVIETPSNGEEEISV
Sbjct: 624 HIKACLVMQSCGMSPEGLDRKTDEPMIGASLLSGSPTSIKKKEEPCVIETPSNGEEEISV 683

Query: 267 SLKRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVALLNS 326
           SLKRQKV E EEE +VP+KATESLL+EWLKNNDGVTLDNMM+QFK  G EEESLVALLNS
Sbjct: 684 SLKRQKVRESEEERQVPVKATESLLIEWLKNNDGVTLDNMMEQFK--GSEEESLVALLNS 743

Query: 327 LEGDF 331
           LEG++
Sbjct: 744 LEGNW 746

[Close]

BLAST of Cucsat.G5363 vs. ExPASy TrEMBL
Match: A0A6J1HNL0 (ATP-dependent DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111465921 PE=3 SV=1)

HSP 1 Score: 491 bits (1264), Expect = 3.90e-164
Identity = 250/320 (78.12%), Postives = 274/320 (85.62%), Query Frame = 0


Query: 27  YAICGDQTVKRIALTRPSTKARLANIDGVNQHLLKMHGDLILEAVKRLSQQVSLSLDGEY 86
           YAICGD TVK+IALTRPSTKARLANIDGVNQHLLKMHGDLIL+AVK LSQ+V LSLDGE 
Sbjct: 609 YAICGDLTVKKIALTRPSTKARLANIDGVNQHLLKMHGDLILQAVKHLSQEVGLSLDGEC 668

Query: 87  REEGNGQGTTMRKLYTEPNQRRPLAPAKFEAWKMWHEDGLSIQKIANFPGRLAPIKETTV 146
           +E+GNGQ TT RKLYTE NQ RPLAPAKFEAWKMW+EDGLSI KIANFPGR APIKETTV
Sbjct: 669 KEDGNGQCTTARKLYTESNQGRPLAPAKFEAWKMWYEDGLSIPKIANFPGRSAPIKETTV 728

Query: 147 FGYIVDAVQEGYEIDWTKFCDEIGLTCQIFSDIQSAVTKVGSAEKLKAIKDELPEEINYA 206
            GYI+DA QEGY IDWTKFCDEIGLTC IFSDIQSAV+KVGS +KLKAIKDELPEEI+YA
Sbjct: 729 SGYILDAAQEGYTIDWTKFCDEIGLTCSIFSDIQSAVSKVGSTDKLKAIKDELPEEISYA 788

Query: 207 HIKACLVMQSRGMSPEGL---DRKTDEPMTGASVLSGSPTSIQKKEEPCVIETPSNGEEE 266
           HIKACL+MQ  G+SPE     D KTDEPM      SGSPTS Q+KEEP V    +   EE
Sbjct: 789 HIKACLLMQKCGISPESTLPRDEKTDEPMNVVPKFSGSPTSKQQKEEPNVAAACNPSTEE 848

Query: 267 ISVSLKRQKVCELEEEHRVPIKATESLLVEWLKNNDGVTLDNMMKQFKLKGCEEESLVAL 326
           I +SLKRQKVCE +EE+R+P+KAT S LVEWLKNNDGVTLDNMM+ FK  G EEESLVA+
Sbjct: 849 IPISLKRQKVCESDEENRIPVKATVSSLVEWLKNNDGVTLDNMMQNFK--GSEEESLVAM 908

Query: 327 LNSLEGDFVIYKKNNIYKLM 343
           LN+LEGDFVIY+KNN+YKLM
Sbjct: 909 LNALEGDFVIYRKNNVYKLM 926

The following BLAST results are available for this feature:

BLAST of Cucsat.G5363 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G5363 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011653463.2	3.04e-220	100.00	uncharacterized protein LOC101222028 [Cucumis sativus] >KGN53928.2 hypothetical ...	[more]
XP_008442016.1	3.73e-202	93.06	PREDICTED: ATP-dependent DNA helicase RecQ-like isoform X2 [Cucumis melo]	[more]
XP_008442015.1	1.76e-200	93.06	PREDICTED: ATP-dependent DNA helicase RecQ-like isoform X1 [Cucumis melo]	[more]
KAA0041766.1	1.03e-191	92.13	ATP-dependent DNA helicase RecQ-like isoform X2 [Cucumis melo var. makuwa]	[more]
XP_038883532.1	2.77e-190	87.31	ATP-dependent DNA helicase RecQ-like [Benincasa hispida]	[more]

BLAST of Cucsat.G5363 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1A4	6.19e-224	99.69	ATP-dependent DNA helicase OS=Cucumis sativus OX=3659 GN=Csa_4G188732 PE=3 SV=1	[more]
A0A1S3B4R4	1.80e-202	93.06	ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103486004 PE=3 SV=1	[more]
A0A1S3B4Q2	8.53e-201	93.06	ATP-dependent DNA helicase OS=Cucumis melo OX=3656 GN=LOC103486004 PE=3 SV=1	[more]
A0A5A7TI77	4.97e-192	92.13	ATP-dependent DNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A6J1HNL0	3.90e-164	78.13	ATP-dependent DNA helicase OS=Cucurbita maxima OX=3661 GN=LOC111465921 PE=3 SV=1	[more]

BLAST of Cucsat.G5363 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029491	Helicase Helix-turn-helix domain	PFAM	PF14493	HTH_40	coord: 62..158 e-value: 5.8E-18 score: 65.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G5363.T7	Cucsat.G5363.T7	mRNA
Cucsat.G5363.T2	Cucsat.G5363.T2	mRNA
Cucsat.G5363.T3	Cucsat.G5363.T3	mRNA
Cucsat.G5363.T1	Cucsat.G5363.T1	mRNA
Cucsat.G5363.T8	Cucsat.G5363.T8	mRNA
Cucsat.G5363.T6	Cucsat.G5363.T6	mRNA
Cucsat.G5363.T9	Cucsat.G5363.T9	mRNA
Cucsat.G5363.T10	Cucsat.G5363.T10	mRNA
Cucsat.G5363.T11	Cucsat.G5363.T11	mRNA
Cucsat.G5363.T12	Cucsat.G5363.T12	mRNA
Cucsat.G5363.T13	Cucsat.G5363.T13	mRNA
Cucsat.G5363.T15	Cucsat.G5363.T15	mRNA
Cucsat.G5363.T14	Cucsat.G5363.T14	mRNA
Cucsat.G5363.T16	Cucsat.G5363.T16	mRNA
Cucsat.G5363.T4	Cucsat.G5363.T4	mRNA
Cucsat.G5363.T5	Cucsat.G5363.T5	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
biological_process	GO:0044237	cellular metabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0043138	3'-5' DNA helicase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0004386	helicase activity