Cucsat.G4990 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G4990
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Ribosomal RNA small subunit methyltransferase A
Location	ctg1227: 1450344 .. 1453429 (-)
RNA-Seq Expression	Cucsat.G4990
Synteny	Cucsat.G4990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAAATTTGATTGGTGTCAAATGATTAGTGGAGGAAGCGAAGTCGATCCATGGATCCGAACTGTAGCCAAAATAATAAATCCTTCCTCTTAAAATCTTCTACAACTTTGCAACTCCCGGCTCTTTTTTTCCCGATCCATTGGCTGAAATTTTGTGGTGTTCAATTTGAATTTGAATCCTCAATTTGTAGAACAGCAACAGTCTTTCGCTTCCAAATTTCTTCGTTAAGGTAGATTTCTGTGTTTCTTCTTCAGCTTTTAGTTTTTCTTCTTTTTTTTTTAATTGCTTTATCATTATTGATTTGATTGCGCGTTTCGCTTAAGATTCCTGGATATATATATATATTTTTTGGGTTACTTTCGGTTGCAATGTTTGAAAAACAAGTTTTCGGAAAGTCAATTACTAGTGGGAGAAGGAGGAGGTTGCTTCAGGAATAAATTGAATTAAGATTTTGTTTGTGTTTGGAATTTGAGAGTTTTGAAGATTTAGAGGTATTTGTTGGTTTATATTTTCAGTGCTTGAATGAGTTTGAAATCGAACAAGAGAACGTGATTTTTTTTTTTTTTGTCCTTTTTTTTATATGTAGAAACAATATTAAATTTTAGGTTCTTTGAATTTAGCCGACTTTTTGAGTAGAAGCAATCTCTTGAAACGAAATAAGGGCAGGGATTTCTCATGGCTTTAATCGGGAATTTTGAGGGAGATAAATTTAGTAAAGGCGTGTTTCCTTTTTCGGACACAGCTCGATTTTGTCAAGTTGGTTTCTCGGTAATGGTTATTGTTTTGATTTATCTTTTTCCAATTCTGTGAAAGCTTCTATATAGATTGGGCAACTGGATTTAGAAATTTTTGTCTATCGTACTCATATCCTAAAAATATTATATATTTCATTAGCTATTTTTTTCTTGTTCTTCTGTCTTGATTCTACAATCTGGAAACTTGGTCAAAAACCTTGAAGAATCTTAGATGATTCCTGATTTTCAAGGCCTGAAGTGGTCAAACAGAGTAATCTCTCTTCTTTTTCTTCCTTCCTGAGCTTGTGAGATTCTTTGGATACATTCAAAACTCCATCGTTTAGTCTATTATGCTACATTAAATGTGATGAAATTCGATTGTTTCTTTCTTAATTTCGTTAATATCGGCAATCTATGATTGCAGCAATCTCGTTTGTTGTCGTTTCGCAATTTGATTTTTCGGTTTCTTCCTGCTTTCTTATCCTTTACAGGGAAAAACTTGCTCCATTTCACATCTCATACTTTAGAATCTACTTGTGATTACCTTATATTTCTTTGGAGGGACTTGGTACTTGTTAGCAAAGAAAATTGAACTCACACATGTCTGTGGCATTTCCCCAACTCTCGTGGTGGTTATGGAGTGGGAAGCATAAAGAACCTCGAAGCTCGAATGGTGGGTCTGCTTTAAATGCTTCACTAGATACAGCCAACCGGGAAACGGACACTCTAAAATTTCCTTTAGTTAATGGGGCCAACTTATCATCCTCATCTAGAAGGGTGAAGAGGAAATGGCATAGTCGAGAAGAAAGAAAAATTGATAGGGAATACGACATTGTTCTTGTTCCATCTGATGGAGGATGTGTTTCAGGGTCTGAGTCTGATGATTCAGATTGGTCGATCGGATGGTCGGAGCCCCACGGACCTGGATTCCAGAGTGATGATGAATCAGATAACAGTTTTGCTGTGCTGGTTCCATGTTATGGACGCATTTACAATGATTTTGTGGACGAGACTAAGAATAGTATCTTAAGTGCCGTTGGGAACATTAACGACAGTTTTTCTGCTGGTAAGAGTTGTTTCTTCTCAAGCTTGCATATAGTTGGTGTTGCTTGTTAGTTATTGCTTTTGCCTACCAAAAGATTCTTCTAGTCCTCTTTCGTACATAGTGACTCGATAAACTTCGTTCATTTCCTATGTCAGGTTAATTTCATTGTTCACAATCTAACTTACACTGTAAATGTTGGAAATCAAATAAACGTATTTCCAAGAAGGAAAAACTTGCATGTAATTATGTCTCATATTCATAGACCCTTATTTATAGGAAGATGACGCTATTTTCTTTTATGAATCATGCTCAGCAGGAGGCGTTGTGAAACTTCATCTCTAAGAAATATTACTTGACACATTCTCAATAGGATAATGATGTATGAGAAAAAGATATCATGTACTAAAACTGAGCAAGCAAATAGGCTTACATGCTGATAGTGTAGAATGATAGGATCAAATTGAACTTGTTTCAATGTATAAACCTCCTAGCTCCCTTACAGATACTCTAAATAACCATAGTAGGACTTTAATAGAATTATATTCTGTTTGCTTTGGGCCTTTTCGGAAATATTTGGAGTTTCCCTGTTCTGATTGGCTTCATATTGTGTGAATGTTAAAGCCAATGCGAATAATACTAAAAATAAGTTACTACAATTGTAATTTTCTTTTGGTTTGCTTTACGTTTGTTTTAAGCTGATTATGTCTGCACTTCTCCATGGAACAGAGAGCAAGAAATATATGGAACAGTGGCTGTCCTCTCTTCAGAACTGCTAATGCTCTGATTCCAAGAAAGAAAACCATTTTGTGATATATAGTCATTTAAAAAAACTGAAAAAAATTTGAAAAAGGAAAAAAGAAAAAGATATAGAATACTATCTATTCTGGCTTCTTTTGACAGTACTTGCTGAGAAGCAAATTGGATGCAGACAGTGGGTGGAGATTCTCATCTTTTCAATTCTTTTTGACCATATTATGCTCTTAAAAAGAGAGACTTAAAAAGAATATGACCTCATCCGGGATGAAGCTTGTAAAAATGGGATGTAAATAATTTGAGACTCCTTTATAAATATGGAAGACGGAGACAGAGGAGGAAAAAGGTTGAGCCAACCAGCCATTGGGTTTGAAGAAAAAAAATCTTAAAGAGGTGGAAGTGGAAGTGGAAGTGTTTTGTAATTCTTTTGGAGTTTTTATGTATAAAGTGGGAAGTGTTTAATTTCATGTGAAAAGTTGGTGTAAATAGTGAGTCCATTTATGTATGGTTCAATGATGTAAATATGATATGAGTGGGTTTGGTTCATCTAAAATGCCTGCTCTGAAGGATGGACCCATTTGTAAAATTTGTTGTACATAGTAACACAGTTGTGCAGTGCAGGCATGAAAATTGTAGATACCTCTATCCTCATTCAATGTAATATTCTTTAATATAATATATATATATATCTATATATGTATGTGTATAGCGATAGAACCTATGAACTAATTTTCCTTTCTTATATTGGTTGTTGTTTGTAATGAGAAATATAATTAT

Coding sequence (CDS)

ATGTCTGTGGCATTTCCCCAACTCTCGTGGTGGTTATGGAGTGGGAAGCATAAAGAACCTCGAAGCTCGAATGGTGGGTCTGCTTTAAATGCTTCACTAGATACAGCCAACCGGGAAACGGACACTCTAAAATTTCCTTTAGTTAATGGGGCCAACTTATCATCCTCATCTAGAAGGGTGAAGAGGAAATGGCATAGTCGAGAAGAAAGAAAAATTGATAGGGAATACGACATTGTTCTTGTTCCATCTGATGGAGGATGTGTTTCAGGGTCTGAGTCTGATGATTCAGATTGGTCGATCGGATGGTCGGAGCCCCACGGACCTGGATTCCAGAGTGATGATGAATCAGATAACAGTTTTGCTGTGCTGGTTCCATGTTATGGACGCATTTACAATGATTTTGTGGACGAGACTAAGAATAGTATCTTAAGTGCCGTTGGGAACATTAACGACAGTTTTTCTGCTGAGAGCAAGAAATATATGGAACAGTGGCTGTCCTCTCTTCAGAACTGCTAA

Protein sequence

MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANLSSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC

Homology

[Close]

BLAST of Cucsat.G4990 vs. NCBI nr
Match: XP_004152600.1 (uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736756.1 uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736757.1 uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736758.1 uncharacterized protein LOC101213956 [Cucumis sativus] >KGN62990.2 hypothetical protein Csa_022594 [Cucumis sativus])

HSP 1 Score: 355 bits (911), Expect = 9.81e-124
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANLSSSSRRV 60
           MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANLSSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANLSSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 171
           AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 171

[Close]

BLAST of Cucsat.G4990 vs. NCBI nr
Match: XP_038886443.1 (uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886444.1 uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886445.1 uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886446.1 uncharacterized protein LOC120076637 [Benincasa hispida])

HSP 1 Score: 354 bits (909), Expect = 1.98e-123
Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANLSSSSRRV 60
           MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGAN+SSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 171
           AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 171

[Close]

BLAST of Cucsat.G4990 vs. NCBI nr
Match: XP_008444920.1 (PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo] >XP_008444921.1 PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo] >XP_016900065.1 PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo])

HSP 1 Score: 353 bits (907), Expect = 4.00e-123
Identity = 168/171 (98.25%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANLSSSSRRV 60
           MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGAN+SSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERK+DREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF
Sbjct: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 171
           AVLVPCYGRIYNDFVDETKNSILSA+GNINDSFSAESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSLQNC 171

[Close]

BLAST of Cucsat.G4990 vs. NCBI nr
Match: XP_022997281.1 (uncharacterized protein LOC111492231 isoform X2 [Cucurbita maxima])

HSP 1 Score: 332 bits (852), Expect = 9.77e-115
Identity = 160/171 (93.57%), Postives = 166/171 (97.08%), Query Frame = 0


Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANLSSSSRRV 60
           MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGAN+SSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSALNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERKIDREYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCMSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 171
           AVLVPCY RIYNDFVDETK S+LSAVGNI+DSFS ESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTESKKYMEQWLSSLQNC 171

[Close]

BLAST of Cucsat.G4990 vs. NCBI nr
Match: XP_023545352.1 (uncharacterized protein LOC111804795 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332 bits (851), Expect = 1.39e-114
Identity = 159/171 (92.98%), Postives = 166/171 (97.08%), Query Frame = 0


Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANLSSSSRRV 60
           MSVAFPQLSWWL SGKHKEP+SSNGGS+LNASLDTANRETDTLKF LVNGAN+SSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSSLNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERKIDREYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCISGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 171
           AVLVPCY RIYNDFVDETK S+LSAVGNI+DSFS ESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTESKKYMEQWLSSLQNC 171

[Close]

BLAST of Cucsat.G4990 vs. ExPASy TrEMBL
Match: A0A1S3BB05 (uncharacterized protein LOC103488121 OS=Cucumis melo OX=3656 GN=LOC103488121 PE=4 SV=1)

HSP 1 Score: 353 bits (907), Expect = 1.94e-123
Identity = 168/171 (98.25%), Postives = 171/171 (100.00%), Query Frame = 0


Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANLSSSSRRV 60
           MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGAN+SSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERK+DREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF
Sbjct: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 171
           AVLVPCYGRIYNDFVDETKNSILSA+GNINDSFSAESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSLQNC 171

[Close]

BLAST of Cucsat.G4990 vs. ExPASy TrEMBL
Match: A0A6J1K730 (uncharacterized protein LOC111492231 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492231 PE=4 SV=1)

HSP 1 Score: 332 bits (852), Expect = 4.73e-115
Identity = 160/171 (93.57%), Postives = 166/171 (97.08%), Query Frame = 0


Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANLSSSSRRV 60
           MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGAN+SSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSALNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERKIDREYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCMSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 171
           AVLVPCY RIYNDFVDETK S+LSAVGNI+DSFS ESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTESKKYMEQWLSSLQNC 171

[Close]

BLAST of Cucsat.G4990 vs. ExPASy TrEMBL
Match: A0A6J1HCV7 (uncharacterized protein LOC111462457 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462457 PE=4 SV=1)

HSP 1 Score: 331 bits (849), Expect = 1.36e-114
Identity = 159/171 (92.98%), Postives = 166/171 (97.08%), Query Frame = 0


Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANLSSSSRRV 60
           MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGAN+SSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSALNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERKIDREYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCMSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 171
           AVLVPCY RIYNDFVDETK S+LSAVGNI+DSFS ESKKYMEQWLS+LQNC
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTESKKYMEQWLSALQNC 171

[Close]

BLAST of Cucsat.G4990 vs. ExPASy TrEMBL
Match: A0A6J1KDE3 (uncharacterized protein LOC111492231 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492231 PE=4 SV=1)

HSP 1 Score: 329 bits (844), Expect = 8.13e-114
Identity = 161/172 (93.60%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANLSSSSRRV 60
           MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGAN+SSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSALNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERKIDREYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCMSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFS-AESKKYMEQWLSSLQNC 171
           AVLVPCY RIYNDFVDETK S+LSAVGNI+DSFS AESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTAESKKYMEQWLSSLQNC 172

[Close]

BLAST of Cucsat.G4990 vs. ExPASy TrEMBL
Match: A0A6J1HCV2 (uncharacterized protein LOC111462457 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462457 PE=4 SV=1)

HSP 1 Score: 328 bits (841), Expect = 2.33e-113
Identity = 160/172 (93.02%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANLSSSSRRV 60
           MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGAN+SSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSALNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120
           KRKWHSREERKIDREYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCMSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFS-AESKKYMEQWLSSLQNC 171
           AVLVPCY RIYNDFVDETK S+LSAVGNI+DSFS AESKKYMEQWLS+LQNC
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTAESKKYMEQWLSALQNC 172

[Close]

BLAST of Cucsat.G4990 vs. TAIR 10
Match: AT4G38060.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-17
Identity = 55/133 (41.35%), Postives = 70/133 (52.63%), Query Frame = 0


Query: 38  RETDTLKFPLVNGANLSSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSD 97
           +ET+ LKFP       +  +R  KRK    E         + +V  DG           +
Sbjct: 20  KETEALKFP-------TKIARVNKRKELELESFGSSGSESVDVVAGDG----------PE 79

Query: 98  WSIGWSEPHGPGFQSDDE-SDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAE 157
           WS+GW+EPHGP FQSDDE +D  F VLVPCY R   +      N +LSAV N+ +    +
Sbjct: 80  WSVGWTEPHGPDFQSDDEGNDGGFLVLVPCY-RAVVEGSSNNNNQLLSAVKNLPNGLPPD 134

Query: 158 SKKYMEQWLSSLQ 170
            K YMEQWLSSLQ
Sbjct: 140 GKNYMEQWLSSLQ 134

[Close]

BLAST of Cucsat.G4990 vs. TAIR 10
Match: AT5G65480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 85.9 bits (211), Expect = 3.5e-17
Identity = 63/173 (36.42%), Postives = 88/173 (50.87%), Query Frame = 0


Query: 1   MSVAFPQLSWWLWSG---KHKEPRSS--NGGSALNASLDTANRETDTLKFPLVNGANLSS 60
           M+V+FP+L  WL  G   K +E + S   G S+L+ SL    ++T T K       + SS
Sbjct: 1   MAVSFPRLPRWLCGGSNTKDREKKESIPKGSSSLSPSL----KKTTTSK-----TGSSSS 60

Query: 61  SSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDE 120
           S ++ KR W  R       E D +      G V   E DD +WSIGW EPHGPGF+++D+
Sbjct: 61  SVKKTKRGWIGRGGSGSGGEEDKI------GNVVFPEPDDPEWSIGWVEPHGPGFKAEDD 120

Query: 121 SDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSL 169
               F VLVP Y ++ +   ++  N   S         +A   K MEQWLSS+
Sbjct: 121 DCGGFVVLVPLYKKVMDGSGNQIPNGFFSP--------AAPDGKNMEQWLSSM 150

[Close]

BLAST of Cucsat.G4990 vs. TAIR 10
Match: AT4G38060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.9 bits (159), Expect = 3.7e-11
Identity = 44/113 (38.94%), Postives = 57/113 (50.44%), Query Frame = 0


Query: 38  RETDTLKFPLVNGANLSSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSD 97
           +ET+ LKFP       +  +R  KRK    E         + +V  DG           +
Sbjct: 20  KETEALKFP-------TKIARVNKRKELELESFGSSGSESVDVVAGDG----------PE 79

Query: 98  WSIGWSEPHGPGFQSDDE-SDNSFAVLVPCYGRIYNDFVDETKNSILSAVGNI 150
           WS+GW+EPHGP FQSDDE +D  F VLVPCY R   +      N +LSAV N+
Sbjct: 80  WSVGWTEPHGPDFQSDDEGNDGGFLVLVPCY-RAVVEGSSNNNNQLLSAVKNL 114

The following BLAST results are available for this feature:

BLAST of Cucsat.G4990 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G4990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004152600.1	9.81e-124	100.00	uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736756.1 uncharact...	[more]
XP_038886443.1	1.98e-123	99.42	uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886444.1 unchara...	[more]
XP_008444920.1	4.00e-123	98.25	PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo] >XP_008444921.1 P...	[more]
XP_022997281.1	9.77e-115	93.57	uncharacterized protein LOC111492231 isoform X2 [Cucurbita maxima]	[more]
XP_023545352.1	1.39e-114	92.98	uncharacterized protein LOC111804795 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cucsat.G4990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BB05	1.94e-123	98.25	uncharacterized protein LOC103488121 OS=Cucumis melo OX=3656 GN=LOC103488121 PE=...	[more]
A0A6J1K730	4.73e-115	93.57	uncharacterized protein LOC111492231 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HCV7	1.36e-114	92.98	uncharacterized protein LOC111462457 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KDE3	8.13e-114	93.60	uncharacterized protein LOC111492231 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HCV2	2.33e-113	93.02	uncharacterized protein LOC111462457 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Cucsat.G4990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38060.2	1.6e-17	41.35	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G65480.1	3.5e-17	36.42	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G38060.1	3.7e-11	38.94	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34464:SF5	SUBFAMILY NOT NAMED	coord: 1..170
None	No IPR available	PANTHER	PTHR34464	OS09G0376300 PROTEIN	coord: 1..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G4990.T1	Cucsat.G4990.T1	mRNA
Cucsat.G4990.T6	Cucsat.G4990.T6	mRNA
Cucsat.G4990.T5	Cucsat.G4990.T5	mRNA
Cucsat.G4990.T3	Cucsat.G4990.T3	mRNA
Cucsat.G4990.T4	Cucsat.G4990.T4	mRNA
Cucsat.G4990.T2	Cucsat.G4990.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
molecular_function	GO:0008168	methyltransferase activity