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Cucsat.G4978 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCTTTGAACATAAAATCAGCAAACACAATCGTCTTCCTCCGACCCATCCATTTCTCAAAATTTTCCAATTCCCAACAAAAAGAAAAATGAGTGTTCCTCAAGAACCAATTTCTACACAAACACTTGAATCCAAACTCCTCTCTTCTCAGTCCCAATGCCTCTTTTTACAATCTAAATTAAACAGTGCCAAGGCAATTCCATCCTTGATCTCTTTTTTCTTATTTATTTATTGCAATAACAAATGTTATTATCATTATTATTATAATTCATTAATTCTTCATCTTTTTATTTATTAAGGAAGAAGCGAAACTGAATGCACAAGGCTTGAAGAAGGCAATTGAACAGAACCGAATACTGAGGGAAGAGCGTTCATGTTTGGTTGAAGAATTGAAGACGTTGAAAGACTTTATTAACAAAGGAAAATCAACTCTTGATCGTGCTCGAGAAACCCAAATTCGTGTCCATGAATTGGAAAAAGAAGTTGAAATTTTAAAATTGGATTTGAATTTCTTCAAGTATCAACACCAAATGCAAAAGGTTAATCTCTAAAAATTAAACATCCTTTTCATCAATATCAAAAGTAATAATGCATGGTTACGTTGATTTGGTTTTACTTTTAGTAGTTTCAATTTTCACATATGGAAGAAGCTTTGATTGAGTCCGCTTTATCTAAATTAATGGGAAAAG ATCTTTGAACATAAAATCAGCAAACACAATCGTCTTCCTCCGACCCATCCATTTCTCAAAATTTTCCAATTCCCAACAAAAAGAAAAATGAGTGTTCCTCAAGAACCAATTTCTACACAAACACTTGAATCCAAACTCCTCTCTTCTCAGTCCCAATGCCTCTTTTTACAATCTAAATTAAACAGTGCCAAGGAAGAAGCGAAACTGAATGCACAAGGCTTGAAGAAGGCAATTGAACAGAACCGAATACTGAGGGAAGAGCGTTCATGTTTGGTTGAAGAATTGAAGACGTTGAAAGACTTTATTAACAAAGGAAAATCAACTCTTGATCGTGCTCGAGAAACCCAAATTCGTGTCCATGAATTGGAAAAAGAAGTTGAAATTTTAAAATTGGATTTGAATTTCTTCAAGTATCAACACCAAATGCAAAAGTTTCAATTTTCACATATGGAAGAAGCTTTGATTGAGTCCGCTTTATCTAAATTAATGGGAAAA IFEHKISKHNRLPPTHPFLKIFQFPTKRKMSVPQEPISTQTLESKLLSSQSQCLFLQSKLNSAKEEAKLNAQGLKKAIEQNRILREERSCLVEELKTLKDFINKGKSTLDRARETQIRVHELEKEVEILKLDLNFFKYQHQMQKFQFSHMEEALIESALSKLMGK Homology
BLAST of Cucsat.G4978 vs. NCBI nr
Match: XP_038885825.1 (uncharacterized protein LOC120076121 [Benincasa hispida]) HSP 1 Score: 107 bits (266), Expect = 2.42e-25 Identity = 58/80 (72.50%), Postives = 66/80 (82.50%), Query Frame = 0
BLAST of Cucsat.G4978 vs. NCBI nr
Match: XP_022131622.1 (uncharacterized protein LOC111004753 [Momordica charantia]) HSP 1 Score: 87.8 bits (216), Expect = 1.21e-17 Identity = 62/123 (50.41%), Postives = 77/123 (62.60%), Query Frame = 0
BLAST of Cucsat.G4978 vs. NCBI nr
Match: KAG7020228.1 (hypothetical protein SDJN02_16911, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 82.4 bits (202), Expect = 1.45e-15 Identity = 56/123 (45.53%), Postives = 77/123 (62.60%), Query Frame = 0
BLAST of Cucsat.G4978 vs. NCBI nr
Match: KAG6585310.1 (hypothetical protein SDJN03_18043, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 82.4 bits (202), Expect = 1.54e-15 Identity = 56/123 (45.53%), Postives = 77/123 (62.60%), Query Frame = 0
BLAST of Cucsat.G4978 vs. NCBI nr
Match: XP_027149444.1 (centriolin-like [Coffea eugenioides]) HSP 1 Score: 68.2 bits (165), Expect = 3.29e-10 Identity = 55/138 (39.86%), Postives = 76/138 (55.07%), Query Frame = 0
BLAST of Cucsat.G4978 vs. ExPASy TrEMBL
Match: A0A6J1BRI9 (uncharacterized protein LOC111004753 OS=Momordica charantia OX=3673 GN=LOC111004753 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 5.85e-18 Identity = 62/123 (50.41%), Postives = 77/123 (62.60%), Query Frame = 0
BLAST of Cucsat.G4978 vs. ExPASy TrEMBL
Match: A0A6P6USV6 (centriolin-like OS=Coffea arabica OX=13443 GN=LOC113713845 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.60e-10 Identity = 55/138 (39.86%), Postives = 76/138 (55.07%), Query Frame = 0
BLAST of Cucsat.G4978 vs. ExPASy TrEMBL
Match: A0A6A4LS94 (Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_10711 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.89e-10 Identity = 51/139 (36.69%), Postives = 79/139 (56.83%), Query Frame = 0
BLAST of Cucsat.G4978 vs. ExPASy TrEMBL
Match: A0A068VJT0 (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00007436001 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 4.13e-10 Identity = 55/138 (39.86%), Postives = 76/138 (55.07%), Query Frame = 0
BLAST of Cucsat.G4978 vs. ExPASy TrEMBL
Match: A0A484LDJ9 (Uncharacterized protein OS=Cuscuta campestris OX=132261 GN=CCAM_LOCUS16239 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 7.71e-10 Identity = 53/134 (39.55%), Postives = 75/134 (55.97%), Query Frame = 0
BLAST of Cucsat.G4978 vs. TAIR 10
Match: AT1G14680.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G09060.1); Has 8132 Blast hits to 6366 proteins in 685 species: Archae - 171; Bacteria - 671; Metazoa - 4046; Fungi - 445; Plants - 318; Viruses - 23; Other Eukaryotes - 2458 (source: NCBI BLink). ) HSP 1 Score: 45.1 bits (105), Expect = 5.8e-05 Identity = 40/116 (34.48%), Postives = 56/116 (48.28%), Query Frame = 0
BLAST of Cucsat.G4978 vs. TAIR 10
Match: AT4G09060.1 (unknown protein; LOCATED IN: membrane; EXPRESSED IN: leaf; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G14680.1); Has 8168 Blast hits to 6036 proteins in 601 species: Archae - 151; Bacteria - 570; Metazoa - 4684; Fungi - 544; Plants - 345; Viruses - 91; Other Eukaryotes - 1783 (source: NCBI BLink). ) HSP 1 Score: 43.1 bits (100), Expect = 2.2e-04 Identity = 40/129 (31.01%), Postives = 62/129 (48.06%), Query Frame = 0
BLAST of Cucsat.G4978 vs. TAIR 10
Match: AT4G09060.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G14680.1). ) HSP 1 Score: 43.1 bits (100), Expect = 2.2e-04 Identity = 40/129 (31.01%), Postives = 62/129 (48.06%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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