Cucsat.G4908 (gene) Cucumber (B10) v3

Overview
NameCucsat.G4908
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Descriptionsuccinate dehydrogenase subunit 5, mitochondrial
Locationctg1227: 143136 .. 144545 (-)
RNA-Seq ExpressionCucsat.G4908
SyntenyCucsat.G4908
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCAAATCATTCAAATGAAACATATGATCCTCATCCTCCGTTTCCACAATCTCCGCCACCCCGAACCACCCACTGCCCCCCAACGCCTCAAAGTAAAGCCTTCCTCTGTCCCTCAGCACATCTTTCTCCGCCACACAAACTAGCACCCTCCCACTCCCCAGCCCCGCCAGCCTCCCTGCTCCTTCTGCCACTGGATTCACCCATGGGTCGTCATTCTCCGGTCTCGCTGGACAAATAAACCCCCACAGCTGATCAAATAACCTCGCCTTCACTGGATTCTCTGCCTCCTTACCAATTCTCACACTGCCCCAAAAGTATGGATGCTCCAAAGCAACTCCAATGAGATTGATGTTCACCCCACAATCAGGATCTCCGGCCACCATTGCCAGGTTGTGAGCAATGTTGGCACCAGCACTAGCTCCGGCCAAAAACACCCTTTTGAAATCTACATGTTTGTTCATCCACATCTCAGGTCCTTTCCCATCACGGTGTGAAATGACCCATTGAAGGGCAGCCCACGAGTCTTCGTAAGCTGTGGGAATGGGATGCTCTGGCGCCTTCCTGTAGTTAACGGAAACTGCCACGACTTTGGCTTCAGCAGTAAGGGCGTTGAGATAGTTGTGGTACTTGGCCGTGAAAGGTGATTGTGTGCAGAAGCAACCACCGTGAAAATAGACTACTACTGGAAGGCGTTGAGTTGAGTGAGTGAGGTTTGGGAGGAAGAGTCTCGCTGAGACGCCAAATGTCGGGAGTAATGTTACATCTTTAGATGTGACGCCGGTGAGAGGATCGGTTCCCGATGGGACGAAATCAATTCCGACAAGTCGCTCAATTCTTCCATTCTTGTAGATACGAATAAGCGGGAGTAACTCGAAGGCTGTTTCTGGTTCGCCGGATTCCATTGAAGAAGGATATAACAGAGCCGAGCAAATGGCTTATTGAGTCCAAACTCCTGAGAGGGTCTATTCTTCTGATTTATGGATTGAAACATGAAGAATGTGTGGGCTTCGTTGCTTTATCTAGTTCGCTCCATTATTTATGGTAAGCTTCTACTACATTAAGTATTATCATCTCAAAATTTTTCACTAATGTTCGTTGAAATTTAATTGAGTGAATAAAACATGCGTACATGTTTCCGTACAAAAATAAATTGGTATGCAGTAAAAAAGAACTGAACATAAATTTTGAAAACATATTTTAGTTCATTTTATTGTGAAAGAAATAAAAATAAAGGCAAATCATGAATTAAATCGGCCTTGTAAAAGATTAGGGATTCAACTTTTTATTCATGTGTGATAGAGCTTAAAAGAAGAAGTGTTATTTTGTCGAAATCTAGAGGAATCTAAAACAAATTATCCAGAAACATATTTGAAGTTTTTCTAGTTAAAGAAAAGACTAAAACTAAAATTAAAGATCTAGTATAGGTCATGGATCATGTCCAATAAAAACGGAAAGTTTGAAGTTTAAAGATAATTTTGAAAACTCAAACTTAGTGGGAGATTTCCCTGTCCAAACCAAATTGATCAAATTTCATTAATCTGATGAAATAGCCATATTTTGAAACCAATGAAAAACTGAGCAAACTAATTAAACTAAAACGAACATAAAGTGGGCAATATGTGATAAGAAAGAATTTGGTCGGGGTCGATTTAGAAAATTCAAAATATAACATTTTTCAAAATTAAAAATCTTAAAACTCACTCAAACAGATGATGAATTGATTTGTACTTGTTAGAGTGAGTTTGAACATTTATAAAGGAAAATTGTAATTGATGACTATTTTAGCAATAATAATTAAGGATATAGCAACATTTTAAAAAAATTGCAAATATAGCAAAACTATCACGGATAAACCTCATATAATATATCAGTGATAAACTTATATCATTGATAGAATTTAACAAATTTTGCTATATTTACATTTTTTTAAAATTGTGCTATATACTTAATTAATTTGAATTTAATTGCTAAATTTGCGACTATCCATTTATAAATCCAACACTTGCGGATTGAGAAACCTACGGCCCAATAATTTCTCTAAAAGTACTGTCCAAAATGTTATGATTGGGCCATGACCCAATAAGACATACGTTCGGCCCAAAATCAAGTAAGACAGAGAAATTGAAGGAGGCGCTTCTTACAATTTACTCTTATTTTTGTTTCCGGTCATTTCGAACAGCCTCCGCTCTCTGAGTTAGCTTTTAATTTTGCAGTTTCAAGGTAAAGAGGGAAAGTCATGGAGAAAACTGTGATTCTTAGATCACTATTGCGTTCTGTTCGCGCCAGATCTTACGGCATCGCCGGAGTCACTCACCGGAATTTGCTCCAAAGTAATCATCAGGTTGCACGAAGCTTCTTCTATCTCTCGTCCCATCGTCCTTCTTTCTCAGATTCTCCACAGAGAGTTTCTTCTGGTACGCTTCTTAATTAGTTATTTTTCTTTCATAGATTTAAATCTTTCCTGATTAATTTGGAAGGAAGCGGAATTCCTTGTTCGCTATTCTTTGATCAACTTAATAAATGCTAGCTATTGAGCTTTTTTCTCACGATTGCCGATATGCTTGTGTATTACTCGTGATTAGTTAAATGTATGGTTCTTCTTCCATGAAGTACACATACAGATTTAGTTCTTCCAATTTAAAGTATTGCTCGCTGTATTCGTTTAGTAAATTGCTACATTATTTTCTGTATTAATATCTATCATCAGGTCAATTGTGCGACGAGTCTTTATAGTGCGCGCAGTGTGCTTTTTCTGTGAAATGCCAAACTTCTCCTTATCGTAACTTTAAGCAATGTCTTTGTCTCAAAGAATCTTAACAAAACCAATTTCGTATGTGAGGCCAAGGAATATCAAGTAAAATATTAAAATTCATTTACCATTGTATTTTATTATTTCAGGTCGCCATGGTGATCTGATTGTATGAACAATGTAGATACACTCAATTAAATTCTTATTTCTGCATTTTAATGTTTGAAAATATATCATATACCTGTCTCTGGTAAATTTCTGCAGATTGTAGCTATCCATCTGGTGTAGGGCACGCTAGATATTTTAGTGCTGATGTAGTTAGCATGCCCACAATTGAAGATCCCAAGCTTCAGAACGTTTTCAAGGATTTAATGGCTGCAAGTTGGGATAAGCTTCCTGAGGCGGTTATTTATGATGTAAAGACCGCGTTGTCTGGAAGCACTGATGATAAAGCTGGAAAAGAAATTGTGGAAAATGTTTTCCGAGCAGCTGAAGCGGCTGAGGAGTTTGGGGATATGCTTATCAATTTGAAAATGGAAATTGATGATAGCATTGGTCTTAGTGGCGAGGTATTGGACTTACAGATTTATCATTTTGTATTTTTTTTTTTGCCAGTTGTTTATAATGTAAAAACTTCTGAGACAATCTGCAGAATGTGAAGCCTTTGTCCGATGAGCTTAAGAAGGCATTACATACGGTTCATGAACGCTATATAGCCTACTTGGATTCATTTGGTCCTGAGGAAAACTATCTGCGGAAGAAAGTGGAAACAGAGTTAGGAACAAAGATGATATACTTGAAAATGAGATGCAGTGGCCTTGGATCTGAGTGGGGAAAGGTAAGAAGCCTTTCTGCTTTGTAGTTTCTAAGTTGCTATTTTTAAACATTTAAGTTGGTGAATTAAATATAGCCCATTAGGCAAATACAATTGCCAACTTAGAATCCTTGCACCATTACATTATAAAAGAGTGGAGTCTTTTGATCACAATATGTTAATTTTGAACTGGTAAGAAAGCTTATATGGGAACACTGGGCTAGGAGTTTGGTGACTCATCCTTGTTTACTTTTATAAACCCTGCAGATTAATACATGTTCAGCTATAATAATTTAATCATATACTTGCATTGGAAAGAGTTAACGCTTTTGTTATTCTAATTATAATAAATGGCTTTTCTTTTTTAAAATTTAATAAACGAATTTGATCATTTGTTTGTTAACCATGCCATCTTTGCTATTTTACTACAGGTTTCTGTGCTGGGAACCTCTGGTCTATCGGGGTCATATGTTGAGCAAAGAGCATAAATTTGGCACCTTTGAATGTTTGGCTGTAACTGCAAGCTTCCTTTAGTTTGGGTGTATGTTCTTCAATGTTTTATTGTCTACTCTCAGAACCAATTAATGTGGAGTTAAATTGCAATCGAATAAGATCTTACATCGACGAATGAGTTTTCAGAATTAAACATCCTTGCTTGTTTGCCAATTCTTGGATTCCTTTTGCCTTTATTTATTTATGAGAAGTTCCTTTTAAATTTTGCAAGTTTGTATCATCCGTTTCTGGTGTTTAGATTTATGAGTTCCTAAAGAGTTCCGTGTCATCTGCGGAGAGGGCAACCTTCACTATGATTTTCGCTACTGAACCTCGCATTACCGGTAAAATAGCTTAGAGGGTTAAAACAAATGTTTATGAAGTAATTTGTGTAGTTGGAATTAATCAGATCAAATAACTTGATGAGTTTTGTTACCAAGAAAGTACAAAAACAGAGTTTAGCTCCAAATCTGGACATCAATATGTCTTTACAATTTTGGTGCCTTTACTCCATAACCAAGATTCAGATGGCGACTTGGGCAGTGGCGGAAGTAAGACTGCCTTCCTGCAAAGACCGAACGGCCATCCTTCACAATGAAAAACTTCCTGCAAGATGGTGCGTCTCTTGAGATCCTCATCTAGAAAATTAAGACCATTTAAGCTTGAACATCGGGAAAAGTTGGCTTCCACAGAAAAGAAGGCTTCATTTGTTGCTGCAGTTGAACAACACGTGAGAAAACTCCGAACAGAGTAGAACTCATCTCCCATGTTATCTTCATTTCCAGATTCATCCATCTTCTCAATCTCCATTGAAGTAATATATAATTCTTTGGTTGCAGGTGAGAAAACCCAGGAGAAGCTGTCTGACAGGTTAGTCTTTCGTTTCAACTTTTCCATTGCTCGAGTTCTGATTTCTGATACAATTTCCTGAGAGTTGAGAAGTAGATCGAAACTGAGAAACAATTTTCATATAATAGGAAATAGAAACAAAAGGTTACAATATCTGTAGATATGTGACACGAGGATAAGTTGGTGAGTACTTCCTCTGTATCATCAAAGTCACTTGTAGGATAATCGTCCTCATCGTTAAACTTTGGCAGTGGTTTTCTAAAAGTATGGCAGTTGCAGAATGCATCCTTCAAAGCACCTGCTAGAAAGCATTTCCTGGAAGGATTTGGTGGGTCTTCTTGATAAAAGACCCCCATATTGGAGAAGCAAGATTTTCTGGTTGGTTTATGAGCCAGCAAACTATATAAAGAATTAATCGCCCCTTACTGTTCTAGGGTTCAGAATGACTATTTTTGACAGTGCCTTCATATCTTAATGAAAATAACGTTTTTTAATCCTTAGGTGTAAAGACAAAGATAGAAGAGAGCACAAGACACTCCAACTAATGATGTTGAACTGCACTAGAGATTCCCAGCACAAAGCTCACACTTAGAAAATTGATTGCCGTACTGTAAGCTAATCTAACACCTACTTTTCTAGGCGCTTGGATTCTCACTTGATGCTCAAGATTTGAGAGAATTGATACGTTTAACCAACCAATATCTCCTATTTTTGACAACTTGATCAGTGTGGCACTTCCATTATTAAAGCTCATGTGAGGAGAAGAGTACGAAAAACAAACAGCTGATCTTCAAAAGTTTGGTCTCAATCTGGTATGATGTCCACATACCAAGTTCGCTCGTTTTAAATGAAGAAGTTAATTAGTCTGTTTCTTTTCATAAATGCTCTATTTAGTACTTAGGGTCGTTTCGCTTTTAAATCAGTTCCACCTGATCGTATTGATGAAAAACGAACTGAAAATTGATGATATCCAGACTGTTACTATCAAGAGAGAGGAGGGGGAAAAAAATACACACACACACACCGAGATTAACCATTAATTTTTCCCAAATCGA

Coding sequence (CDS)

ATGGAGAAAACTGTGATTCTTAGATCACTATTGCGTTCTGTTCGCGCCAGATCTTACGGCATCGCCGGAGTCACTCACCGGAATTTGCTCCAAAGTAATCATCAGGTTGCACGAAGCTTCTTCTATCTCTCGTCCCATCGTCCTTCTTTCTCAGATTCTCCACAGAGAGTTTCTTCTGATTGTAGCTATCCATCTGGTGTAGGGCACGCTAGATATTTTAGTGCTGATGTAGTTAGCATGCCCACAATTGAAGATCCCAAGCTTCAGAACGTTTTCAAGGATTTAATGGCTGCAAGTTGGGATAAGCTTCCTGAGGCGGTTATTTATGATGTAAAGACCGCGTTGTCTGGAAGCACTGATGATAAAGCTGGAAAAGAAATTGTGGAAAATGTTTTCCGAGCAGCTGAAGCGGCTGAGGAGTTTGGGGATATGCTTATCAATTTGAAAATGGAAATTGATGATAGCATTGGTCTTAGTGGCGAGAATGTGAAGCCTTTGTCCGATGAGCTTAAGAAGGCATTACATACGGTTCATGAACGCTATATAGCCTACTTGGATTCATTTGGTCCTGAGGAAAACTATCTGCGGAAGAAAGTGGAAACAGAGTTAGGAACAAAGATGATATACTTGAAAATGAGATGCAGTGGCCTTGGATCTGAGTGGGGAAAGGTTTCTGTGCTGGGAACCTCTGGTCTATCGGGGTCATATGTTGAGCAAAGAGCATAA

Protein sequence

MEKTVILRSLLRSVRARSYGIAGVTHRNLLQSNHQVARSFFYLSSHRPSFSDSPQRVSSDCSYPSGVGHARYFSADVVSMPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVENVFRAAEAAEEFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGPEENYLRKKVETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Homology
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BLAST of Cucsat.G4908 vs. ExPASy Swiss-Prot
Match: Q9SX77 (Succinate dehydrogenase subunit 5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDH5 PE=1 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 8.0e-61
Identity = 115/162 (70.99%), Postives = 136/162 (83.95%), Query Frame = 0 

Query: 1   MPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVENVFRAAEAAE 60
           MP +ED  + N FKDLMAA W +LP AV+ D KTA+S +TDDKAG+E ++NVFRAAEA E
Sbjct: 96  MPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISKNTDDKAGQEALKNVFRAAEAVE 155

Query: 61  EFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGPEENYLRKKV 120
           EFG +L ++KMEIDDSIG+SGE VKPL +++  AL T ++RY  YLDSF PEE YL+KKV
Sbjct: 156 EFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTAYQRYAEYLDSFEPEEVYLKKKV 215

Query: 121 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 163
           E ELGTKMI+LKMRCSGLGSEWGKV+VLGTSGLSGSYVEQRA
Sbjct: 216 EMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSGSYVEQRA 257

[Close]
BLAST of Cucsat.G4908 vs. ExPASy Swiss-Prot
Match: Q0JDA2 (Succinate dehydrogenase subunit 5, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=SDH5 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 6.0e-56
Identity = 101/162 (62.35%), Postives = 134/162 (82.72%), Query Frame = 0 

Query: 1   MPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVENVFRAAEAAE 60
           +P I DP++++ FKDLMAASW  LP++++ + K A S +TDDKAGKE + NVFRAAEA E
Sbjct: 70  LPAISDPEVESAFKDLMAASWTGLPDSLVIEAKKAASKATDDKAGKEALLNVFRAAEACE 129

Query: 61  EFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGPEENYLRKKV 120
           EFG +L+ L+M +DD  G++GENV PL   ++ A+ + ++RY+ YL+SFGPEENYLRKKV
Sbjct: 130 EFGGVLVTLRMALDDLCGITGENVGPLPGYIEDAVKSAYKRYMKYLESFGPEENYLRKKV 189

Query: 121 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 163
           E ELGTKMI+LKMRCSG+GSEWGK++++GTSG+SGSYVE RA
Sbjct: 190 ENELGTKMIHLKMRCSGVGSEWGKITLIGTSGISGSYVELRA 231

[Close]
BLAST of Cucsat.G4908 vs. NCBI nr
Match: XP_004152731.1 (succinate dehydrogenase subunit 5, mitochondrial [Cucumis sativus] >KGN62537.1 hypothetical protein Csa_021793 [Cucumis sativus])

HSP 1 Score: 322 bits (825), Expect = 1.01e-109
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 1   MPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVENVFRAAEAAE 60
           MPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVENVFRAAEAAE
Sbjct: 80  MPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVENVFRAAEAAE 139

Query: 61  EFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGPEENYLRKKV 120
           EFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGPEENYLRKKV
Sbjct: 140 EFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGPEENYLRKKV 199

Query: 121 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 162
           ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Sbjct: 200 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 241

[Close]
BLAST of Cucsat.G4908 vs. NCBI nr
Match: XP_008444638.1 (PREDICTED: succinate dehydrogenase subunit 5, mitochondrial [Cucumis melo])

HSP 1 Score: 303 bits (776), Expect = 2.94e-102
Identity = 152/162 (93.83%), Postives = 156/162 (96.30%), Query Frame = 0 

Query: 1   MPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVENVFRAAEAAE 60
           MP I+DPKL  VFKDLMAASWDKLPE VIY+ KTALSGSTDDKAGKEIVENVFRAA AAE
Sbjct: 80  MPAIQDPKLNIVFKDLMAASWDKLPEPVIYEAKTALSGSTDDKAGKEIVENVFRAAVAAE 139

Query: 61  EFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGPEENYLRKKV 120
           EFGD+LINLKMEIDDSIGLSGENVKPLSDELKKALHTVH+RYIAYLDSFGPEENYLRKKV
Sbjct: 140 EFGDILINLKMEIDDSIGLSGENVKPLSDELKKALHTVHDRYIAYLDSFGPEENYLRKKV 199

Query: 121 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 162
           ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Sbjct: 200 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 241

[Close]
BLAST of Cucsat.G4908 vs. NCBI nr
Match: KAA0060875.1 (succinate dehydrogenase subunit 5 [Cucumis melo var. makuwa])

HSP 1 Score: 303 bits (776), Expect = 5.24e-102
Identity = 152/162 (93.83%), Postives = 156/162 (96.30%), Query Frame = 0 

Query: 1   MPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVENVFRAAEAAE 60
           MP I+DPKL  VFKDLMAASWDKLPE VIY+ KTALSGSTDDKAGKEIVENVFRAA AAE
Sbjct: 97  MPAIQDPKLNIVFKDLMAASWDKLPEPVIYEAKTALSGSTDDKAGKEIVENVFRAAVAAE 156

Query: 61  EFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGPEENYLRKKV 120
           EFGD+LINLKMEIDDSIGLSGENVKPLSDELKKALHTVH+RYIAYLDSFGPEENYLRKKV
Sbjct: 157 EFGDILINLKMEIDDSIGLSGENVKPLSDELKKALHTVHDRYIAYLDSFGPEENYLRKKV 216

Query: 121 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 162
           ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Sbjct: 217 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 258

[Close]
BLAST of Cucsat.G4908 vs. NCBI nr
Match: XP_022144355.1 (succinate dehydrogenase subunit 5, mitochondrial-like isoform X2 [Momordica charantia])

HSP 1 Score: 293 bits (749), Expect = 2.89e-98
Identity = 143/162 (88.27%), Postives = 153/162 (94.44%), Query Frame = 0 

Query: 1   MPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVENVFRAAEAAE 60
           MPTIED KLQNVFKDLMA SWD+LP +++YDVK ALSGSTDDKAGKE+VENVFRAAEA E
Sbjct: 72  MPTIEDSKLQNVFKDLMATSWDELPNSIVYDVKAALSGSTDDKAGKEVVENVFRAAEAVE 131

Query: 61  EFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGPEENYLRKKV 120
           EFG +LINLKM+IDDSIGLSGE+VKPLSDELK ALHTVH+RY  YLD+FGPEENYLRKKV
Sbjct: 132 EFGGILINLKMKIDDSIGLSGEDVKPLSDELKNALHTVHDRYTTYLDAFGPEENYLRKKV 191

Query: 121 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 162
           ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Sbjct: 192 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 233

[Close]
BLAST of Cucsat.G4908 vs. NCBI nr
Match: XP_022144354.1 (succinate dehydrogenase subunit 5, mitochondrial-like isoform X1 [Momordica charantia])

HSP 1 Score: 293 bits (749), Expect = 3.79e-98
Identity = 143/162 (88.27%), Postives = 153/162 (94.44%), Query Frame = 0 

Query: 1   MPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVENVFRAAEAAE 60
           MPTIED KLQNVFKDLMA SWD+LP +++YDVK ALSGSTDDKAGKE+VENVFRAAEA E
Sbjct: 80  MPTIEDSKLQNVFKDLMATSWDELPNSIVYDVKAALSGSTDDKAGKEVVENVFRAAEAVE 139

Query: 61  EFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGPEENYLRKKV 120
           EFG +LINLKM+IDDSIGLSGE+VKPLSDELK ALHTVH+RY  YLD+FGPEENYLRKKV
Sbjct: 140 EFGGILINLKMKIDDSIGLSGEDVKPLSDELKNALHTVHDRYTTYLDAFGPEENYLRKKV 199

Query: 121 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 162
           ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Sbjct: 200 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 241

[Close]
BLAST of Cucsat.G4908 vs. ExPASy TrEMBL
Match: A0A0A0LP60 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360050 PE=4 SV=1)

HSP 1 Score: 322 bits (825), Expect = 4.91e-110
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 

Query: 1   MPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVENVFRAAEAAE 60
           MPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVENVFRAAEAAE
Sbjct: 80  MPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVENVFRAAEAAE 139

Query: 61  EFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGPEENYLRKKV 120
           EFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGPEENYLRKKV
Sbjct: 140 EFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGPEENYLRKKV 199

Query: 121 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 162
           ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Sbjct: 200 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 241

[Close]
BLAST of Cucsat.G4908 vs. ExPASy TrEMBL
Match: A0A1S3BAR6 (succinate dehydrogenase subunit 5, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103487909 PE=4 SV=1)

HSP 1 Score: 303 bits (776), Expect = 1.42e-102
Identity = 152/162 (93.83%), Postives = 156/162 (96.30%), Query Frame = 0 

Query: 1   MPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVENVFRAAEAAE 60
           MP I+DPKL  VFKDLMAASWDKLPE VIY+ KTALSGSTDDKAGKEIVENVFRAA AAE
Sbjct: 80  MPAIQDPKLNIVFKDLMAASWDKLPEPVIYEAKTALSGSTDDKAGKEIVENVFRAAVAAE 139

Query: 61  EFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGPEENYLRKKV 120
           EFGD+LINLKMEIDDSIGLSGENVKPLSDELKKALHTVH+RYIAYLDSFGPEENYLRKKV
Sbjct: 140 EFGDILINLKMEIDDSIGLSGENVKPLSDELKKALHTVHDRYIAYLDSFGPEENYLRKKV 199

Query: 121 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 162
           ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Sbjct: 200 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 241

[Close]
BLAST of Cucsat.G4908 vs. ExPASy TrEMBL
Match: A0A5A7V4R2 (Succinate dehydrogenase subunit 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00070 PE=4 SV=1)

HSP 1 Score: 303 bits (776), Expect = 2.54e-102
Identity = 152/162 (93.83%), Postives = 156/162 (96.30%), Query Frame = 0 

Query: 1   MPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVENVFRAAEAAE 60
           MP I+DPKL  VFKDLMAASWDKLPE VIY+ KTALSGSTDDKAGKEIVENVFRAA AAE
Sbjct: 97  MPAIQDPKLNIVFKDLMAASWDKLPEPVIYEAKTALSGSTDDKAGKEIVENVFRAAVAAE 156

Query: 61  EFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGPEENYLRKKV 120
           EFGD+LINLKMEIDDSIGLSGENVKPLSDELKKALHTVH+RYIAYLDSFGPEENYLRKKV
Sbjct: 157 EFGDILINLKMEIDDSIGLSGENVKPLSDELKKALHTVHDRYIAYLDSFGPEENYLRKKV 216

Query: 121 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 162
           ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Sbjct: 217 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 258

[Close]
BLAST of Cucsat.G4908 vs. ExPASy TrEMBL
Match: A0A6J1CRE2 (succinate dehydrogenase subunit 5, mitochondrial-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014059 PE=4 SV=1)

HSP 1 Score: 293 bits (749), Expect = 1.40e-98
Identity = 143/162 (88.27%), Postives = 153/162 (94.44%), Query Frame = 0 

Query: 1   MPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVENVFRAAEAAE 60
           MPTIED KLQNVFKDLMA SWD+LP +++YDVK ALSGSTDDKAGKE+VENVFRAAEA E
Sbjct: 72  MPTIEDSKLQNVFKDLMATSWDELPNSIVYDVKAALSGSTDDKAGKEVVENVFRAAEAVE 131

Query: 61  EFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGPEENYLRKKV 120
           EFG +LINLKM+IDDSIGLSGE+VKPLSDELK ALHTVH+RY  YLD+FGPEENYLRKKV
Sbjct: 132 EFGGILINLKMKIDDSIGLSGEDVKPLSDELKNALHTVHDRYTTYLDAFGPEENYLRKKV 191

Query: 121 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 162
           ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Sbjct: 192 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 233

[Close]
BLAST of Cucsat.G4908 vs. ExPASy TrEMBL
Match: A0A6J1CS25 (succinate dehydrogenase subunit 5, mitochondrial-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014059 PE=4 SV=1)

HSP 1 Score: 293 bits (749), Expect = 1.83e-98
Identity = 143/162 (88.27%), Postives = 153/162 (94.44%), Query Frame = 0 

Query: 1   MPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVENVFRAAEAAE 60
           MPTIED KLQNVFKDLMA SWD+LP +++YDVK ALSGSTDDKAGKE+VENVFRAAEA E
Sbjct: 80  MPTIEDSKLQNVFKDLMATSWDELPNSIVYDVKAALSGSTDDKAGKEVVENVFRAAEAVE 139

Query: 61  EFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGPEENYLRKKV 120
           EFG +LINLKM+IDDSIGLSGE+VKPLSDELK ALHTVH+RY  YLD+FGPEENYLRKKV
Sbjct: 140 EFGGILINLKMKIDDSIGLSGEDVKPLSDELKNALHTVHDRYTTYLDAFGPEENYLRKKV 199

Query: 121 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 162
           ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Sbjct: 200 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 241

[Close]
BLAST of Cucsat.G4908 vs. TAIR 10
Match: AT1G47420.1 (succinate dehydrogenase 5 )

HSP 1 Score: 234.6 bits (597), Expect = 5.7e-62
Identity = 115/162 (70.99%), Postives = 136/162 (83.95%), Query Frame = 0 

Query: 1   MPTIEDPKLQNVFKDLMAASWDKLPEAVIYDVKTALSGSTDDKAGKEIVENVFRAAEAAE 60
           MP +ED  + N FKDLMAA W +LP AV+ D KTA+S +TDDKAG+E ++NVFRAAEA E
Sbjct: 96  MPEMEDSDVLNAFKDLMAADWAELPSAVVKDAKTAISKNTDDKAGQEALKNVFRAAEAVE 155

Query: 61  EFGDMLINLKMEIDDSIGLSGENVKPLSDELKKALHTVHERYIAYLDSFGPEENYLRKKV 120
           EFG +L ++KMEIDDSIG+SGE VKPL +++  AL T ++RY  YLDSF PEE YL+KKV
Sbjct: 156 EFGGILTSIKMEIDDSIGMSGEGVKPLPNDITDALRTAYQRYAEYLDSFEPEEVYLKKKV 215

Query: 121 ETELGTKMIYLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA 163
           E ELGTKMI+LKMRCSGLGSEWGKV+VLGTSGLSGSYVEQRA
Sbjct: 216 EMELGTKMIHLKMRCSGLGSEWGKVTVLGTSGLSGSYVEQRA 257

The following BLAST results are available for this feature:
BLAST of Cucsat.G4908 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SX778.0e-6170.99Succinate dehydrogenase subunit 5, mitochondrial OS=Arabidopsis thaliana OX=3702... [more]
Q0JDA26.0e-5662.35Succinate dehydrogenase subunit 5, mitochondrial OS=Oryza sativa subsp. japonica... [more]
BLAST of Cucsat.G4908 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004152731.11.01e-109100.00succinate dehydrogenase subunit 5, mitochondrial [Cucumis sativus] >KGN62537.1 h... [more]
XP_008444638.12.94e-10293.83PREDICTED: succinate dehydrogenase subunit 5, mitochondrial [Cucumis melo][more]
KAA0060875.15.24e-10293.83succinate dehydrogenase subunit 5 [Cucumis melo var. makuwa][more]
XP_022144355.12.89e-9888.27succinate dehydrogenase subunit 5, mitochondrial-like isoform X2 [Momordica char... [more]
XP_022144354.13.79e-9888.27succinate dehydrogenase subunit 5, mitochondrial-like isoform X1 [Momordica char... [more]
BLAST of Cucsat.G4908 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LP604.91e-110100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360050 PE=4 SV=1[more]
A0A1S3BAR61.42e-10293.83succinate dehydrogenase subunit 5, mitochondrial OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A5A7V4R22.54e-10293.83Succinate dehydrogenase subunit 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A6J1CRE21.40e-9888.27succinate dehydrogenase subunit 5, mitochondrial-like isoform X2 OS=Momordica ch... [more]
A0A6J1CS251.83e-9888.27succinate dehydrogenase subunit 5, mitochondrial-like isoform X1 OS=Momordica ch... [more]
BLAST of Cucsat.G4908 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G47420.15.7e-6270.99succinate dehydrogenase 5 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025397Succinate dehydrogenase subunit 5, mitochondrialPFAMPF14290DUF4370coord: 1..241
e-value: 2.0E-105
score: 351.9
IPR025397Succinate dehydrogenase subunit 5, mitochondrialPANTHERPTHR36139SUCCINATE DEHYDROGENASE SUBUNIT 5, MITOCHONDRIALcoord: 2..241
NoneNo IPR availablePANTHERPTHR36139:SF1SUCCINATE DEHYDROGENASE SUBUNIT 5, MITOCHONDRIALcoord: 2..241

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G4908.T5Cucsat.G4908.T5mRNA
Cucsat.G4908.T3Cucsat.G4908.T3mRNA
Cucsat.G4908.T4Cucsat.G4908.T4mRNA
Cucsat.G4908.T2Cucsat.G4908.T2mRNA
Cucsat.G4908.T1Cucsat.G4908.T1mRNA
Cucsat.G4908.T9Cucsat.G4908.T9mRNA
Cucsat.G4908.T11Cucsat.G4908.T11mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006099 tricarboxylic acid cycle
cellular_component GO:0045273 respiratory chain complex II