Cucsat.G4804 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTCATTTTTCTTTATTTTTAAAAAATAAAGAAAAAGGATGAACATATTATTATAAATAAATAAAATAAAATAATATTTGGCTCAAATCAATTTATTATGAACTTATCATAATCATTATCATTATCACATATTGTTTCTTTTTTTCTTTTTTCTTTTTCCATATTGTTGTTGGTTGGAGTAAGCAAATTGAACGAGGAGAGAGTTTATCTCCCAGCGAATGAATCAAGGAAAACCGAGCAGATTTTTCCTTCTGAGAAATGGAAGCTGATGTTTCAATTCATTTTCTATAAACCCTATTCTTCTTTTTCCTCTTCTTCTTTTCAATCTTTGTTTGTCATCACCCTTTTCTCTTTTACTCATTAGGGTTTTTCGGTCCATGGCTTTGTTGTTGTTGTTGTTGTTGTTGACTCCTATGAATCCACGTCTCGCTTTATTGTTTTCACTGCTTTTGGTTCTTTCTTCCGGCTCTGCAGCTAATGTCGTATTGATTGGGGCCAACGTTACACTTTCTTTCGACTCCATTGAAGCTAATTTCGGTTAGTTTCTTTTTTCTTTTTCTTTTGCATACTCTAATTGTCTCCATTTGTCTGCTCGTTTCATTATTTCCAAATTTCCCCTAACTCAATTGTCTTGTTGTGTATTGCTGAGTAGTTTCTGAGTCTGGCACTGGATTAAATGTTTTTGCTCTCGTCATCCCTACTCGTGGTTTACTGTATAGATTCTGCTGTTAATGTGGATTAATTAATCAATTTGTTTAAGATTCTGTCAGATAGTAAATGGCGATTTAGGATGATTTTTATGTTTTGAGAAGATAAATTGGATATTGGAATATGGATATGCAAGAAGGAAAAGAGGTGGCCAGTGAAAATACATGTAATGTAATACAGATTGATTATGGATTCAGTTATGTTATCGATGCCTTTCTTTCTTTTATTGTTTTCCCCCCCTTAAATCGCCGTAATGGATTCTGTTATTTATGAATGGAATTTCTTGTTTCAGCTCCTTCAATAGAAAGTTCGGGAGAACCTGGGGTGTTATATCTGGCAAAGCCTCTTGATGCTTGCTCGACATTGGAAAATAAAGTTGTGGTGCCTGTAAACACCAGTTCACCATTTGCGCTTATAGTTAGAGGAGGATGTAGCTTTGAGGATAAAGTGAGGAGAGCTCAAGTAGCTGGATTTAAAGCTGCAATCATTTATGACAATGAAGATGGTGGCTTAATTGCGAGTAATGACTTTTTGCACTGTTAACTACGTAGTCTACATGCCATTCTCTATTTATGGAAGTGGATTACTTTCTATACGATTTATTAGTTTTAACTATGTCTATGTTGCCATGCTTGCTGCATCTATTCAATTTGCTTGTAGTGTAGATACTGATGCTTCAATGATGGTTTATCTACTTTCAAACATTGAATTAAATTTAGTAGTTACAAATACTTCTAAAATAAATATACCTCAAGGACTTGCTGAATTAAATTTTAATTTTTTTAATGGAGAAACTGAAATAGCATTTCTTAAAAAATTAAAAATAATAAAAACTTACATAGCCGTTGGTTGTTGTCCATCCAAGATCTTCTCTTAAAACTAGTCCCTCTTTTTCTGAAGGATCTTGTCTAGAAAGATTGCCACAATAGGATCAGATGTCTTTTCAGTGTTGATATTCAATCATTATTGTATGGAATGTTCTTGGTCTTGGTATATCTTTGTTTTATATTTATGAAATAAATGATAAACTAGAAAAATTTAAATGACTTCATCAATTAGAATACTTATCTAATTCTTGAATTACAGTCCTTTTCTTTTTGCACAAATTCAACAATGTTTGCATATATGCTATGGGGTCACTGGAATCCTGGATGTAGGCTATCTTGTGTTTGTTGTATATGATTGTTGCAATTGTTTTGATATCTTGATGCTATTGCTTTATCAATGTAAGCTTTATGCCCATACTAGATAATTATAAGTTTCACACTTTTACTTTTCCCTGGTTTTCCTACTCTGTTAATGGGTATGGTGTTATTTGGTTAACCATTATTGCATGCATGCATGCATAAGAGTAAATGTTTTGAAAAGAAGACATTTTCTTGTTAGCTTGAATATTTCCTGGTCATGACTTTGAAGAGTTTGCAGTGGCAGGGAGCTCGGCTGGTATTAGAATACATGCTGTATTTGTTACTAAAACATCTGGCGAGACATTGAAGAAGTATGCAGGCTTGGCTAACGTTGAAATATGGATAGTTCCAAGCTTTGAAAACTCTGCATGGTCCATCATGGCTATCTCCTTTATTTCTCTTCTTGCAATGTCTGCAGTGCTTGCTACTTGTTTCTTCGTTCGAAGACATCGAATAAGACGAGGACGTCCTCGATCTTCTCATACTCAAGAGTTTCGGGGAATGAGCAGGCGTGTAGTAAAAGCAATGCCAAGTCTGATATTTACGACGGCTTTAGAGGATAATTGCACATCAATGACATGTGCCATATGCCTTGAGGACTATACTCCTGGTGAGAAGCTCAGAATTCTACCATGCCGCCACAGTAAGTTCACTCCTTTATTATTCTTCCTTTTTTTGTTTTTGGTAAGAAAAAGAAAGGCATATTTATAAAAAATCCAAAAAGACAACCTAAGGGCAAAGGGTTGAGAGGACCCTTCACACCTTTATTCGGAAGTTGATATTTTTCTTGTTATGCATGTATCTTGCATTTGTAATTATTTGTTGCACTTTGTGCTGTAGAGAACCTCTGTTGGTGTGGCTGGTCCTTGTGTCTTTTTTCCTTTCCATCTATAGCTTAGAGGCCCAACGTTCGTGGATTAGGTAAACATAAATGGGTTCTTAATCTTTATAAAACAAGTAGCATATTTGTAAAAAAATTTAAAAATCATCAAGGTAGTGGTTAATCGATGTCTTATTAACCAACTTCCCATTTATATATGCACCTATTTTTGGGGAAGGAAAATAAAAAAAATTCACTGAATTTGCAGAAAGCTGGACAGACAAAAGAACTTTCCTAGAATCTTGCAAAAAAGCTTCTCGCTTTGTGTTCATTACAGGAGGAGTATAATGAAAATGAGAGTTAGAGAAAGAACTCCCATAGGAAATGAAGAACCTAGCAAAAACAAGAACCACATCCTATTGGCTGTCTGCTCCATTAAAATGTGACAATTTCTTTCCAACCAAAAGGCCACAACACATATAACCACAGAACTCTTTGCTTACATGCATGCATTTACCTGCATTTGTTTCATATATATGATGCAGCTAACATCTTTGATTTGATTACTGAATATAGTTTAATTGGAACTAATTTTCAGAATTTCATGCCCTCTGTGTCGACTCTTGGCTTACTGCTTGGAGAACCTTCTGCCCGGTCTGCAAGCGAGATGCAAGAACTAGCACCGGTGATCCACCACCTTCAGCATCGACACCATTGCTTTCAAGCGCTCCCAGTTCGGTTGCTTCATCCTCTATTTTATCTTCTTCTAGATCATCATTACCACCAAGCTCAGCCATTCAAATATCCCCAGCATTAAGATCACCTTCGGTATCTCGAAACCACTCTCTCTCAAGCACCCCTTACCTTCACCAGTCTCTGATATCCTCCTACCACCAATCTCCGAGATCCTCCTACCACCAATCTCCATCCTTGAGTGTGAGCAGAAGTTCAGTTGAACTCAGAAATGCATCTTCCCAAAGATCTTACACTTCTCATTTAATTTCACCATATTCCTCGTGTTACCCATCTGTTTCACCTTTACATTCAAGATACATGATTCCGCACATTCCTAGTCCAAGCAATGCCTCACCAAGCATCATTGGTTCTTCTAGTCATCAACATAACCCCTTGCATTGTAGTGGGTCAGCTGCAAGCTTATCTCCATTCGCTTCGACTCGGTCTCTACCTGAATGCTGATATGAGAGCAAGAGCAAGAGCAAGAGCGTTGGAGAATCTTTCGTTCACAGACATTGACAACCTATAGAGGGTCGAGGGGTGGGGTGAGGTATGGTTATGGCAATGACATCATCTGGTCTGTAAATTGATTTGTTAGTCGTGATCGTGTCTAAATAGCCTGGTTGGCCGGCTTCATTGTATATTATTCCTTACTATTGCTCCATTTATTTTGGGTTTGAAGTGTTCCATTCTGTGGTACATCATACATACATATGTTGTAGAGGTTGGTTTCTTAAAATATGAAAGTGAAGCAGAGTAATTCTTGTGGGCGGTGGGTTTGTTTGGAATTCTTTAATAAATTTTGGGATATAGATGATAGATGGAGTGGAAGTGGATACTAAATATAAGAGCCTAACCATGAAAGAAACATTTGTAAAAAAATTTACCACTTCTTTGAGACCCTATGAATCAATTTTAACATAATTAGTTCA ATGGCTTTGTTGTTGTTGTTGTTGTTGTTGACTCCTATGAATCCACGTCTCGCTTTATTGTTTTCACTGCTTTTGGTTCTTTCTTCCGGCTCTGCAGCTAATGTCGTATTGATTGGGGCCAACGTTACACTTTCTTTCGACTCCATTGAAGCTAATTTCGCTCCTTCAATAGAAAGTTCGGGAGAACCTGGGGTGTTATATCTGGCAAAGCCTCTTGATGCTTGCTCGACATTGGAAAATAAAGTTGTGGTGCCTGTAAACACCAGTTCACCATTTGCGCTTATAGTTAGAGGAGGATGTAGCTTTGAGGATAAAGTGAGGAGAGCTCAAGTAGCTGGATTTAAAGCTGCAATCATTTATGACAATGAAGATGGTGGCTTAATTGCGATGGCAGGGAGCTCGGCTGGTATTAGAATACATGCTGTATTTGTTACTAAAACATCTGGCGAGACATTGAAGAAGTATGCAGGCTTGGCTAACGTTGAAATATGGATAGTTCCAAGCTTTGAAAACTCTGCATGGTCCATCATGGCTATCTCCTTTATTTCTCTTCTTGCAATGTCTGCAGTGCTTGCTACTTGTTTCTTCGTTCGAAGACATCGAATAAGACGAGGACGTCCTCGATCTTCTCATACTCAAGAGTTTCGGGGAATGAGCAGGCGTGTAGTAAAAGCAATGCCAAGTCTGATATTTACGACGGCTTTAGAGGATAATTGCACATCAATGACATGTGCCATATGCCTTGAGGACTATACTCCTGGTGAGAAGCTCAGAATTCTACCATGCCGCCACAAATTTCATGCCCTCTGTGTCGACTCTTGGCTTACTGCTTGGAGAACCTTCTGCCCGGTCTGCAAGCGAGATGCAAGAACTAGCACCGGTGATCCACCACCTTCAGCATCGACACCATTGCTTTCAAGCGCTCCCAGTTCGGTTGCTTCATCCTCTATTTTATCTTCTTCTAGATCATCATTACCACCAAGCTCAGCCATTCAAATATCCCCAGCATTAAGATCACCTTCGGTATCTCGAAACCACTCTCTCTCAAGCACCCCTTACCTTCACCAGTCTCTGATATCCTCCTACCACCAATCTCCGAGATCCTCCTACCACCAATCTCCATCCTTGAGTGTGAGCAGAAGTTCAGTTGAACTCAGAAATGCATCTTCCCAAAGATCTTACACTTCTCATTTAATTTCACCATATTCCTCGTGTTACCCATCTGTTTCACCTTTACATTCAAGATACATGATTCCGCACATTCCTAGTCCAAGCAATGCCTCACCAAGCATCATTGGTTCTTCTAGTCATCAACATAACCCCTTGCATTGTAGTGGGTCAGCTGCAAGCTTATCTCCATTCGCTTCGACTCGGTCTCTACCTGAATGCTGA MALLLLLLLLTPMNPRLALLFSLLLVLSSGSAANVVLIGANVTLSFDSIEANFAPSIESSGEPGVLYLAKPLDACSTLENKVVVPVNTSSPFALIVRGGCSFEDKVRRAQVAGFKAAIIYDNEDGGLIAMAGSSAGIRIHAVFVTKTSGETLKKYAGLANVEIWIVPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRGRPRSSHTQEFRGMSRRVVKAMPSLIFTTALEDNCTSMTCAICLEDYTPGEKLRILPCRHKFHALCVDSWLTAWRTFCPVCKRDARTSTGDPPPSASTPLLSSAPSSVASSSILSSSRSSLPPSSAIQISPALRSPSVSRNHSLSSTPYLHQSLISSYHQSPRSSYHQSPSLSVSRSSVELRNASSQRSYTSHLISPYSSCYPSVSPLHSRYMIPHIPSPSNASPSIIGSSSHQHNPLHCSGSAASLSPFASTRSLPEC Homology
BLAST of Cucsat.G4804 vs. ExPASy Swiss-Prot
Match: Q8VZ14 (Receptor homology region, transmembrane domain- and RING domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=RMR2 PE=2 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 2.2e-90 Identity = 175/254 (68.90%), Postives = 207/254 (81.50%), Query Frame = 0
BLAST of Cucsat.G4804 vs. ExPASy Swiss-Prot
Match: Q10R93 (Receptor homology region, transmembrane domain- and RING domain-containing protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0167500 PE=2 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 8.7e-87 Identity = 168/259 (64.86%), Postives = 203/259 (78.38%), Query Frame = 0
BLAST of Cucsat.G4804 vs. ExPASy Swiss-Prot
Match: Q69U49 (Receptor homology region, transmembrane domain- and RING domain-containing protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RMR1 PE=2 SV=2) HSP 1 Score: 303.9 bits (777), Expect = 1.9e-81 Identity = 159/254 (62.60%), Postives = 195/254 (76.77%), Query Frame = 0
BLAST of Cucsat.G4804 vs. ExPASy Swiss-Prot
Match: Q0WPW5 (Receptor homology region, transmembrane domain- and RING domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=RMR4 PE=2 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 8.8e-71 Identity = 141/253 (55.73%), Postives = 186/253 (73.52%), Query Frame = 0
BLAST of Cucsat.G4804 vs. ExPASy Swiss-Prot
Match: F4HZZ5 (Receptor homology region, transmembrane domain- and RING domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=RMR5 PE=2 SV=1) HSP 1 Score: 247.7 bits (631), Expect = 1.6e-64 Identity = 130/249 (52.21%), Postives = 176/249 (70.68%), Query Frame = 0
BLAST of Cucsat.G4804 vs. NCBI nr
Match: XP_004138647.2 (receptor homology region, transmembrane domain- and RING domain-containing protein 2 isoform X1 [Cucumis sativus] >KGN63108.1 hypothetical protein Csa_022426 [Cucumis sativus]) HSP 1 Score: 498 bits (1283), Expect = 6.19e-174 Identity = 268/274 (97.81%), Postives = 268/274 (97.81%), Query Frame = 0
BLAST of Cucsat.G4804 vs. NCBI nr
Match: XP_008441229.1 (PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 2-like isoform X2 [Cucumis melo]) HSP 1 Score: 482 bits (1241), Expect = 9.89e-168 Identity = 253/267 (94.76%), Postives = 260/267 (97.38%), Query Frame = 0
BLAST of Cucsat.G4804 vs. NCBI nr
Match: XP_008441228.1 (PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 2-like isoform X1 [Cucumis melo]) HSP 1 Score: 475 bits (1223), Expect = 5.96e-165 Identity = 252/270 (93.33%), Postives = 260/270 (96.30%), Query Frame = 0
BLAST of Cucsat.G4804 vs. NCBI nr
Match: XP_038885132.1 (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like isoform X1 [Benincasa hispida]) HSP 1 Score: 456 bits (1172), Expect = 2.72e-157 Identity = 238/264 (90.15%), Postives = 246/264 (93.18%), Query Frame = 0
BLAST of Cucsat.G4804 vs. NCBI nr
Match: XP_022939223.1 (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like [Cucurbita moschata]) HSP 1 Score: 446 bits (1146), Expect = 2.50e-153 Identity = 235/266 (88.35%), Postives = 245/266 (92.11%), Query Frame = 0
BLAST of Cucsat.G4804 vs. ExPASy TrEMBL
Match: A0A0A0LMS9 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G403140 PE=4 SV=1) HSP 1 Score: 498 bits (1283), Expect = 3.00e-174 Identity = 268/274 (97.81%), Postives = 268/274 (97.81%), Query Frame = 0
BLAST of Cucsat.G4804 vs. ExPASy TrEMBL
Match: A0A1S3B2Y0 (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485424 PE=4 SV=1) HSP 1 Score: 482 bits (1241), Expect = 4.79e-168 Identity = 253/267 (94.76%), Postives = 260/267 (97.38%), Query Frame = 0
BLAST of Cucsat.G4804 vs. ExPASy TrEMBL
Match: A0A1S3B2Z2 (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485424 PE=4 SV=1) HSP 1 Score: 475 bits (1223), Expect = 2.89e-165 Identity = 252/270 (93.33%), Postives = 260/270 (96.30%), Query Frame = 0
BLAST of Cucsat.G4804 vs. ExPASy TrEMBL
Match: A0A6J1FL26 (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111445201 PE=4 SV=1) HSP 1 Score: 446 bits (1146), Expect = 1.21e-153 Identity = 235/266 (88.35%), Postives = 245/266 (92.11%), Query Frame = 0
BLAST of Cucsat.G4804 vs. ExPASy TrEMBL
Match: A0A6J1JSS3 (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111489445 PE=4 SV=1) HSP 1 Score: 444 bits (1143), Expect = 3.45e-153 Identity = 234/266 (87.97%), Postives = 246/266 (92.48%), Query Frame = 0
BLAST of Cucsat.G4804 vs. TAIR 10
Match: AT1G71980.1 (Protease-associated (PA) RING/U-box zinc finger family protein ) HSP 1 Score: 333.6 bits (854), Expect = 1.6e-91 Identity = 175/254 (68.90%), Postives = 207/254 (81.50%), Query Frame = 0
BLAST of Cucsat.G4804 vs. TAIR 10
Match: AT4G09560.1 (Protease-associated (PA) RING/U-box zinc finger family protein ) HSP 1 Score: 268.5 bits (685), Expect = 6.2e-72 Identity = 141/253 (55.73%), Postives = 186/253 (73.52%), Query Frame = 0
BLAST of Cucsat.G4804 vs. TAIR 10
Match: AT1G35630.1 (Protease-associated (PA) RING/U-box zinc finger family protein ) HSP 1 Score: 247.7 bits (631), Expect = 1.1e-65 Identity = 130/249 (52.21%), Postives = 176/249 (70.68%), Query Frame = 0
BLAST of Cucsat.G4804 vs. TAIR 10
Match: AT1G22670.1 (Protease-associated (PA) RING/U-box zinc finger family protein ) HSP 1 Score: 217.2 bits (552), Expect = 1.6e-56 Identity = 132/260 (50.77%), Postives = 172/260 (66.15%), Query Frame = 0
BLAST of Cucsat.G4804 vs. TAIR 10
Match: AT5G66160.2 (receptor homology region transmembrane domain ring H2 motif protein 1 ) HSP 1 Score: 153.3 bits (386), Expect = 2.9e-37 Identity = 106/249 (42.57%), Postives = 142/249 (57.03%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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