Cucsat.G4727 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G4727
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	V-type proton ATPase subunit c''1
Location	ctg1227: 2549961 .. 2551364 (+)
RNA-Seq Expression	Cucsat.G4727
Synteny	Cucsat.G4727

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGGTTCGAACTATTACTATAATGTGCACGAATAAAAAGGTTTCAATATTCTCACGCGCGCGTGGACGTTTCTCGATACTCATCCGTCGATCTCCACAATCTTCAGATCAGGAACTCTATTCCTCCAGGGTTCACACCGGCCAATTTCAGATCAAATCCAATCCCTCTTTCAGATTCAAGTTCGGAGATTGATACTTAATCATGTCAACCGCCGTTGTCCTTACGCGTTCTAGCTCCTGGGCTCGCGCTCTCATCAACATCTCTCCCTACACTTTCTCCGCCATCGGTATCGCCATCGCCATCGGAGTTTCCGTCCTCGGCGCCGCCTGGTATTTCTTTACGTACACTTTGTCTTTCTTTTTACGAATGTTTATTTTGTCGATTTTGTTTTTGAATGGTGAGAATTTGCGTTTTTTCGATTTTGGTAGGGGGATTTACATCACGGGAAGCAGTTTGATTGGTGCGGCGATCAAAGCTCCTCGTATTACTTCCAAGAACTTGATTAGGTGAAGCCCTGACTCTATTTGATGAATTGTTCATATTGCTTTTGGTTGAATTCTTACTTTTATGGTAGGGTCCGGATATGTAATTAGGGGTTATGAAATGTTTAATTCTTGGACTGATACAACTGGGAACGAAGAAAATCGTTAGAATTTATTATCATTTAGAACAGAATTGAGCGTGAGTCCAGTGTTTCTGGACGAATATTGTTGAATGTAATATTGTACATTCCTTGTTCTTGTTTCTGTGGCGATTAATTTGACTATAACAACTTGAATGTTGCGTTCTTTCAGTGTAATTTTCTGTGAAGCTGTTGCTATATACGGTGTCATTGTTGCCATTATCTTACAGACCAAGTTAGAGAGTGTGTCAGCATCTCAGATATATGCTCCCGAGTCTCTAAGAGCAGGATACGCAATTTTTGCTTCTGGAATCATAGTTGGCTTTGCAAACCTTGTTTGCGGGTTTGTTGCCTTCTCTCTTACTTTACTGTTTCAATCGAAATCCTTAAATTTTGTTCTTTTAAAGTTCGTTTACTTTTTAGTTTGATGGTTTATTCTGATGAATCATTTCCGATGCTTTATTTCAAGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCATTATCAGATGCCCAGAACTCCTCCCTTTTTGTGAAAATTCTTGTAATCGAGATCTTCGGCAGTGCACTTGGGTTGTTCGGAGTAATTGTTGGGATAATTATGTCAGCTCAAGCCTCTTGGCCTGCAAAGAGAGGTTAATGATATGCCTCTTGAATTTTGAACACGACGAGATGTTAATGTTCAATTACGATGGGAAGGGTAACTTGTTTTTCTACTCTTGAGCTCTGTACTTTACCCCCTTCGATAGATAATGATATTCTTCTTGTAAAAGCTAGAGTGGGAAGTTTGTATGCATCTTTTAATTGTCTGGGTTTCGATCCTCTTCCCTTGGGAAACCATTTCTTCATTCTGATGTTGGTTTTAAATATTCTTCTTTTTGCCTTCTTTTTTTATGGGAAAACGTCTTTATATATTGTTCTGGTTATTTGAAAATACTGGAAATATTCAATAAGAGGAAGCCAATGTAGTAGGATTGCTTCCTTTTCTAGACGTGTGTAACATAATTTCTTGCAATTTACTTCTTGAATCTTTGTTGAACCAGTGATATTTATTGTTCTTTTATTGGATAACACTCTCCTAATCGTTAATCATATGTTCAAACAAGGATATTGATTTGCCAATTCAATCAGCTATTTTGTAACTTAGTTTCCAAATAATCAACTTGACTTGCAAAATTTGTGTAGCTGCTATATACTCGAGAACTGATATTGAACTCTTATATGATGGTAATGGATATAGTTTCAACTAAACTCATTCCTGATCAATGATGCCAAAGCTGAATTTGAAGACCGACTTTT

Coding sequence (CDS)

ATGTCAACCGCCGTTGTCCTTACGCGTTCTAGCTCCTGGGCTCGCGCTCTCATCAACATCTCTCCCTACACTTTCTCCGCCATCGGTATCGCCATCGCCATCGGAGTTTCCGTCCTCGGCGCCGCCTGGGGGATTTACATCACGGGAAGCAGTTTGATTGGTGCGGCGATCAAAGCTCCTCGTATTACTTCCAAGAACTTGATTAGTGTAATTTTCTGTGAAGCTGTTGCTATATACGGTGTCATTGTTGCCATTATCTTACAGACCAAGTTAGAGAGTGTGTCAGCATCTCAGATATATGCTCCCGAGTCTCTAAGAGCAGGATACGCAATTTTTGCTTCTGGAATCATAGTTGGCTTTGCAAACCTTGTTTGCGGGCTGTGTGTGGGAATCATTGGAAGCAGCTGTGCATTATCAGATGCCCAGAACTCCTCCCTTTTTGTGAAAATTCTTGTAATCGAGATCTTCGGCAGTGCACTTGGGTTGTTCGGAGTAATTGTTGGGATAATTATGTCAGCTCAAGCCTCTTGGCCTGCAAAGAGAGGTTAA

Protein sequence

MSTAVVLTRSSSWARALINISPYTFSAIGIAIAIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAKRG

Homology

[Close]

BLAST of Cucsat.G4727 vs. ExPASy Swiss-Prot
Match: Q9SZY7 (V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.9e-60
Identity = 127/137 (92.70%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 30  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 89
           GIYITGSSLIGAAI+APRITSKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  E
Sbjct: 44  GIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAE 103

Query: 90  SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 149
           SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLF
Sbjct: 104 SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLF 163

Query: 150 GVIVGIIMSAQASWPAK 167
           GVIVGIIMSAQA+WP K
Sbjct: 164 GVIVGIIMSAQATWPTK 180

[Close]

BLAST of Cucsat.G4727 vs. ExPASy Swiss-Prot
Match: Q9SLA2 (V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.9e-60
Identity = 127/137 (92.70%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 30  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 89
           GIYITGSSLIGAAI+APRITSKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  E
Sbjct: 42  GIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAE 101

Query: 90  SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 149
           SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLF
Sbjct: 102 SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLF 161

Query: 150 GVIVGIIMSAQASWPAK 167
           GVIVGIIMSAQA+WP K
Sbjct: 162 GVIVGIIMSAQATWPTK 178

[Close]

BLAST of Cucsat.G4727 vs. ExPASy Swiss-Prot
Match: P23968 (V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VMA16 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 5.8e-38
Identity = 80/133 (60.15%), Postives = 110/133 (82.71%), Query Frame = 0


Query: 30  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 89
           GI+ITGSS+IGA ++APRIT+KNLIS+IFCE VAIYG+I+AI+  +KL   +A  +Y+  
Sbjct: 78  GIFITGSSMIGAGVRAPRITTKNLISIIFCEVVAIYGLIIAIVFSSKLTVATAENMYSKS 137

Query: 90  SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 149
           +L  GY++F +GI VG +NL+CG+ VGI G++ A+SDA +S+LFVKILVIEIFGS LGL 
Sbjct: 138 NLYTGYSLFWAGITVGASNLICGIAVGITGATAAISDAADSALFVKILVIEIFGSILGLL 197

Query: 150 GVIVGIIMSAQAS 163
           G+IVG++M+ +AS
Sbjct: 198 GLIVGLLMAGKAS 210

[Close]

BLAST of Cucsat.G4727 vs. ExPASy Swiss-Prot
Match: Q91V37 (V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus OX=10090 GN=Atp6v0b PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 3.8e-37
Identity = 80/133 (60.15%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 30  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYA-- 89
           GIYITGSS+IG  +KAPRI +KNL+S+IFCEAVAIYG+I+AI++    E  SA++  A  
Sbjct: 68  GIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVISNMAEPFSATEPKAIG 127

Query: 90  PESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALG 149
             +  AGY++F +G+ VG +NL CG+CVGI+GS  AL+DAQN SLFVKIL++EIFGSA+G
Sbjct: 128 HRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIG 187

Query: 150 LFGVIVGIIMSAQ 161
           LFGVIV I+ +++
Sbjct: 188 LFGVIVAILQTSR 200

[Close]

BLAST of Cucsat.G4727 vs. ExPASy Swiss-Prot
Match: Q2TA24 (V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 6.4e-37
Identity = 79/133 (59.40%), Postives = 106/133 (79.70%), Query Frame = 0


Query: 30  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSAS--QIYA 89
           GIYITGSS+IG  +KAPRI +KNL+S+IFCEAVAIYG+I+AI++    E  SA+  +   
Sbjct: 68  GIYITGSSIIGGGVKAPRIKTKNLVSIIFCEAVAIYGIIMAIVISNMAEPFSATDPKAIG 127

Query: 90  PESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALG 149
             +  AGY++F +G+ VG +NL CG+CVGI+GS  AL+DAQN SLFVKIL++EIFGSA+G
Sbjct: 128 HRNYHAGYSMFGAGLTVGLSNLFCGVCVGIVGSGAALADAQNPSLFVKILIVEIFGSAIG 187

Query: 150 LFGVIVGIIMSAQ 161
           LFGVIV I+ +++
Sbjct: 188 LFGVIVAILQTSR 200

[Close]

BLAST of Cucsat.G4727 vs. NCBI nr
Match: XP_038885623.1 (V-type proton ATPase subunit c''1 [Benincasa hispida])

HSP 1 Score: 257 bits (656), Expect = 9.41e-85
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 30  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 89
           GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE
Sbjct: 44  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 103

Query: 90  SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 149
           SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF
Sbjct: 104 SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 163

Query: 150 GVIVGIIMSAQASWPAKRG 168
           GVIVGIIMSAQASWPAKRG
Sbjct: 164 GVIVGIIMSAQASWPAKRG 182

[Close]

BLAST of Cucsat.G4727 vs. NCBI nr
Match: XP_004138742.1 (V-type proton ATPase subunit c''1 [Cucumis sativus] >KGN62907.1 hypothetical protein Csa_021826 [Cucumis sativus])

HSP 1 Score: 257 bits (656), Expect = 9.41e-85
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 30  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 89
           GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE
Sbjct: 44  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 103

Query: 90  SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 149
           SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF
Sbjct: 104 SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 163

Query: 150 GVIVGIIMSAQASWPAKRG 168
           GVIVGIIMSAQASWPAKRG
Sbjct: 164 GVIVGIIMSAQASWPAKRG 182

[Close]

BLAST of Cucsat.G4727 vs. NCBI nr
Match: XP_008445147.1 (PREDICTED: V-type proton ATPase subunit c''1 [Cucumis melo] >KAA0064963.1 V-type proton ATPase subunit c''1 [Cucumis melo var. makuwa])

HSP 1 Score: 257 bits (656), Expect = 9.41e-85
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 30  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 89
           GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE
Sbjct: 44  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 103

Query: 90  SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 149
           SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF
Sbjct: 104 SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 163

Query: 150 GVIVGIIMSAQASWPAKRG 168
           GVIVGIIMSAQASWPAKRG
Sbjct: 164 GVIVGIIMSAQASWPAKRG 182

[Close]

BLAST of Cucsat.G4727 vs. NCBI nr
Match: XP_022962488.1 (V-type proton ATPase subunit c''1-like [Cucurbita moschata] >XP_022996666.1 V-type proton ATPase subunit c''1-like [Cucurbita maxima] >KAG6598594.1 V-type proton ATPase subunit c''1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029527.1 V-type proton ATPase subunit c''1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 254 bits (650), Expect = 7.72e-84
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 30  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 89
           GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE
Sbjct: 44  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 103

Query: 90  SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 149
           SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF
Sbjct: 104 SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 163

Query: 150 GVIVGIIMSAQASWPAKRG 168
           GVIVGIIMSAQASWPAK G
Sbjct: 164 GVIVGIIMSAQASWPAKTG 182

[Close]

BLAST of Cucsat.G4727 vs. NCBI nr
Match: XP_022951859.1 (V-type proton ATPase subunit c''2 [Cucurbita moschata] >XP_023002516.1 V-type proton ATPase subunit c''2 [Cucurbita maxima] >XP_023536708.1 V-type proton ATPase subunit c''2-like [Cucurbita pepo subsp. pepo] >KAG6585444.1 V-type proton ATPase subunit c''1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020363.1 V-type proton ATPase subunit c''1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 254 bits (650), Expect = 7.72e-84
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 30  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 89
           GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE
Sbjct: 44  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 103

Query: 90  SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 149
           SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF
Sbjct: 104 SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 163

Query: 150 GVIVGIIMSAQASWPAKRG 168
           GVIVGIIMSAQASWPAK G
Sbjct: 164 GVIVGIIMSAQASWPAKTG 182

[Close]

BLAST of Cucsat.G4727 vs. ExPASy TrEMBL
Match: A0A5A7V9W8 (V-type proton ATPase subunit c''1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002840 PE=3 SV=1)

HSP 1 Score: 257 bits (656), Expect = 4.56e-85
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 30  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 89
           GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE
Sbjct: 44  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 103

Query: 90  SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 149
           SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF
Sbjct: 104 SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 163

Query: 150 GVIVGIIMSAQASWPAKRG 168
           GVIVGIIMSAQASWPAKRG
Sbjct: 164 GVIVGIIMSAQASWPAKRG 182

[Close]

BLAST of Cucsat.G4727 vs. ExPASy TrEMBL
Match: A0A0A0LQ28 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379870 PE=3 SV=1)

HSP 1 Score: 257 bits (656), Expect = 4.56e-85
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 30  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 89
           GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE
Sbjct: 44  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 103

Query: 90  SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 149
           SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF
Sbjct: 104 SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 163

Query: 150 GVIVGIIMSAQASWPAKRG 168
           GVIVGIIMSAQASWPAKRG
Sbjct: 164 GVIVGIIMSAQASWPAKRG 182

[Close]

BLAST of Cucsat.G4727 vs. ExPASy TrEMBL
Match: A0A1S3BBZ9 (V-type proton ATPase subunit c''1 OS=Cucumis melo OX=3656 GN=LOC103488269 PE=3 SV=1)

HSP 1 Score: 257 bits (656), Expect = 4.56e-85
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 30  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 89
           GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE
Sbjct: 44  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 103

Query: 90  SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 149
           SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF
Sbjct: 104 SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 163

Query: 150 GVIVGIIMSAQASWPAKRG 168
           GVIVGIIMSAQASWPAKRG
Sbjct: 164 GVIVGIIMSAQASWPAKRG 182

[Close]

BLAST of Cucsat.G4727 vs. ExPASy TrEMBL
Match: A0A6J1KLI7 (V-type proton ATPase subunit c''2 OS=Cucurbita maxima OX=3661 GN=LOC111496333 PE=3 SV=1)

HSP 1 Score: 254 bits (650), Expect = 3.74e-84
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 30  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 89
           GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE
Sbjct: 44  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 103

Query: 90  SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 149
           SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF
Sbjct: 104 SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 163

Query: 150 GVIVGIIMSAQASWPAKRG 168
           GVIVGIIMSAQASWPAK G
Sbjct: 164 GVIVGIIMSAQASWPAKTG 182

[Close]

BLAST of Cucsat.G4727 vs. ExPASy TrEMBL
Match: A0A6J1K5F4 (V-type proton ATPase subunit c''1-like OS=Cucurbita maxima OX=3661 GN=LOC111491843 PE=3 SV=1)

HSP 1 Score: 254 bits (650), Expect = 3.74e-84
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 30  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 89
           GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE
Sbjct: 44  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 103

Query: 90  SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 149
           SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF
Sbjct: 104 SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 163

Query: 150 GVIVGIIMSAQASWPAKRG 168
           GVIVGIIMSAQASWPAK G
Sbjct: 164 GVIVGIIMSAQASWPAKTG 182

[Close]

BLAST of Cucsat.G4727 vs. TAIR 10
Match: AT2G25610.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 233.4 bits (594), Expect = 1.3e-61
Identity = 127/137 (92.70%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 30  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 89
           GIYITGSSLIGAAI+APRITSKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  E
Sbjct: 42  GIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAE 101

Query: 90  SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 149
           SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLF
Sbjct: 102 SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLF 161

Query: 150 GVIVGIIMSAQASWPAK 167
           GVIVGIIMSAQA+WP K
Sbjct: 162 GVIVGIIMSAQATWPTK 178

[Close]

BLAST of Cucsat.G4727 vs. TAIR 10
Match: AT4G32530.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 233.4 bits (594), Expect = 1.3e-61
Identity = 127/137 (92.70%), Postives = 133/137 (97.08%), Query Frame = 0


Query: 30  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 89
           GIYITGSSLIGAAI+APRITSKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  E
Sbjct: 44  GIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAE 103

Query: 90  SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLF 149
           SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNS+LFVKILVIEIFGSALGLF
Sbjct: 104 SLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSTLFVKILVIEIFGSALGLF 163

Query: 150 GVIVGIIMSAQASWPAK 167
           GVIVGIIMSAQA+WP K
Sbjct: 164 GVIVGIIMSAQATWPTK 180

[Close]

BLAST of Cucsat.G4727 vs. TAIR 10
Match: AT4G32530.2 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 217.6 bits (553), Expect = 7.5e-57
Identity = 127/167 (76.05%), Postives = 133/167 (79.64%), Query Frame = 0


Query: 30  GIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVSASQIYAPE 89
           GIYITGSSLIGAAI+APRITSKNLISVIFCEAVAIYGVIVAIILQTKLESV +S++Y  E
Sbjct: 44  GIYITGSSLIGAAIEAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSKMYDAE 103

Query: 90  SLRAGYAIFASGIIVGFANLVCG------------------------------LCVGIIG 149
           SLRAGYAIFASGIIVGFANLVCG                              LCVGIIG
Sbjct: 104 SLRAGYAIFASGIIVGFANLVCGSVSTLFSFLTVLVFGFHCQICNRGPHFSCRLCVGIIG 163

Query: 150 SSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQASWPAK 167
           SSCALSDAQNS+LFVKILVIEIFGSALGLFGVIVGIIMSAQA+WP K
Sbjct: 164 SSCALSDAQNSTLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPTK 210

[Close]

BLAST of Cucsat.G4727 vs. TAIR 10
Match: AT1G75630.1 (vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4 )

HSP 1 Score: 75.9 bits (185), Expect = 3.5e-14
Identity = 51/149 (34.23%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 16  FLNGENLRFFDFGRGIYITGSSLIGAA---IKAPRITSKNLISVIFCEAVAIYGVIVAII 75
           FL       F      Y T  S +G A   +  P +  K+++ V+    + IYG+I+A+I
Sbjct: 17  FLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVI 76

Query: 76  LQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSL 135
           + T +   + S       L  GYA  +SG+  G A L  G+ +GI+G +   ++AQ   L
Sbjct: 77  ISTGINPKAKSYY-----LFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKL 136

Query: 136 FVKILVIEIFGSALGLFGVIVGIIMSAQA 162
           FV +++I IF  AL L+G+IVGII+S++A
Sbjct: 137 FVGMILILIFAEALALYGLIVGIILSSRA 160

[Close]

BLAST of Cucsat.G4727 vs. TAIR 10
Match: AT1G19910.1 (ATPase, F0/V0 complex, subunit C protein )

HSP 1 Score: 75.9 bits (185), Expect = 3.5e-14
Identity = 51/149 (34.23%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 16  FLNGENLRFFDFGRGIYITGSSLIGAA---IKAPRITSKNLISVIFCEAVAIYGVIVAII 75
           FL       F      Y T  S +G A   +  P +  K+++ V+    + IYG+I+A+I
Sbjct: 16  FLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVI 75

Query: 76  LQTKLESVSASQIYAPESLRAGYAIFASGIIVGFANLVCGLCVGIIGSSCALSDAQNSSL 135
           + T +   + S       L  GYA  +SG+  G A L  G+ +GI+G +   ++AQ   L
Sbjct: 76  ISTGINPKAKSYY-----LFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKL 135

Query: 136 FVKILVIEIFGSALGLFGVIVGIIMSAQA 162
           FV +++I IF  AL L+G+IVGII+S++A
Sbjct: 136 FVGMILILIFAEALALYGLIVGIILSSRA 159

The following BLAST results are available for this feature:

BLAST of Cucsat.G4727 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZY7	1.9e-60	92.70	V-type proton ATPase subunit c''1 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''1 PE...	[more]
Q9SLA2	1.9e-60	92.70	V-type proton ATPase subunit c''2 OS=Arabidopsis thaliana OX=3702 GN=VHA-c''2 PE...	[more]
P23968	5.8e-38	60.15	V-type proton ATPase subunit c'' OS=Saccharomyces cerevisiae (strain ATCC 204508...	[more]
Q91V37	3.8e-37	60.15	V-type proton ATPase 21 kDa proteolipid subunit OS=Mus musculus OX=10090 GN=Atp6...	[more]
Q2TA24	6.4e-37	59.40	V-type proton ATPase 21 kDa proteolipid subunit OS=Bos taurus OX=9913 GN=ATP6V0B...	[more]

BLAST of Cucsat.G4727 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885623.1	9.41e-85	100.00	V-type proton ATPase subunit c''1 [Benincasa hispida]	[more]
XP_004138742.1	9.41e-85	100.00	V-type proton ATPase subunit c''1 [Cucumis sativus] >KGN62907.1 hypothetical pro...	[more]
XP_008445147.1	9.41e-85	100.00	PREDICTED: V-type proton ATPase subunit c''1 [Cucumis melo] >KAA0064963.1 V-type...	[more]
XP_022962488.1	7.72e-84	99.28	V-type proton ATPase subunit c''1-like [Cucurbita moschata] >XP_022996666.1 V-ty...	[more]
XP_022951859.1	7.72e-84	99.28	V-type proton ATPase subunit c''2 [Cucurbita moschata] >XP_023002516.1 V-type pr...	[more]

BLAST of Cucsat.G4727 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V9W8	4.56e-85	100.00	V-type proton ATPase subunit c''1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A0A0LQ28	4.56e-85	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379870 PE=3 SV=1	[more]
A0A1S3BBZ9	4.56e-85	100.00	V-type proton ATPase subunit c''1 OS=Cucumis melo OX=3656 GN=LOC103488269 PE=3 S...	[more]
A0A6J1KLI7	3.74e-84	99.28	V-type proton ATPase subunit c''2 OS=Cucurbita maxima OX=3661 GN=LOC111496333 PE...	[more]
A0A6J1K5F4	3.74e-84	99.28	V-type proton ATPase subunit c''1-like OS=Cucurbita maxima OX=3661 GN=LOC1114918...	[more]

BLAST of Cucsat.G4727 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25610.1	1.3e-61	92.70	ATPase, F0/V0 complex, subunit C protein	[more]
AT4G32530.1	1.3e-61	92.70	ATPase, F0/V0 complex, subunit C protein	[more]
AT4G32530.2	7.5e-57	76.05	ATPase, F0/V0 complex, subunit C protein	[more]
AT1G75630.1	3.5e-14	34.23	vacuolar H+-pumping ATPase 16 kDa proteolipid subunit 4	[more]
AT1G19910.1	3.5e-14	34.23	ATPase, F0/V0 complex, subunit C protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000245	V-ATPase proteolipid subunit	PRINTS	PR00122	VACATPASE	coord: 67..91 score: 34.11 coord: 123..149 score: 35.96 coord: 41..65 score: 23.26 coord: 150..173 score: 47.15
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 28..87 e-value: 1.1E-14 score: 54.5 coord: 112..171 e-value: 8.8E-10 score: 38.8
None	No IPR available	GENE3D	1.20.120.610		coord: 23..177 e-value: 3.6E-52 score: 178.0
None	No IPR available	PANTHER	PTHR10263	V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT	coord: 4..179
None	No IPR available	PANTHER	PTHR10263:SF56	V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT	coord: 4..179
None	No IPR available	CDD	cd18178	ATP-synt_Vo_c_ATP6F_rpt2	coord: 107..171 e-value: 4.93845E-25 score: 90.2587
None	No IPR available	CDD	cd18177	ATP-synt_Vo_c_ATP6F_rpt1	coord: 25..87 e-value: 5.92642E-26 score: 92.3255
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 104..172
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	81333	F1F0 ATP synthase subunit C	coord: 21..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G4727.T1	Cucsat.G4727.T1	mRNA
Cucsat.G4727.T2	Cucsat.G4727.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
cellular_component	GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain
molecular_function	GO:0015078	proton transmembrane transporter activity