Cucsat.G4415 (gene) Cucumber (B10) v3

Overview
NameCucsat.G4415
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionXyloglucan endotransglucosylase/hydrolase
Locationctg1173: 506446 .. 507935 (+)
RNA-Seq ExpressionCucsat.G4415
SyntenyCucsat.G4415
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTTAAAGGAGCCAAAAAAATGTGTCCTTCCAACGGTGCTCTCCTCCTTCCACTTACTCATTCATAAAGCCGCTTCTTTCTTCTTCCTTTTCTCCACCATTTTTTTCCTCTTCTCTTTCGCACAATCGCCGAATGGGTTTCTCTTCTTTCACCTTCCTCTCTTTTCTCCTCCTCCTTCCCTTTTCTTCTCCTTCTCCTTCTCCTTCAAATCTCCCAATCCTTTCCTTCCATGAAGCCTATAATCACTTGTTCGGCGATGCCAATCTCCTCCTTCTCAACCATGGAAAATCTGTTCATCTTCATTTAGATGAACGAACAGGTCCTCTCTTCCAATCCTTTTTTCTTCCATTACATATTTATCTTAACCCTTTTGTTTTTCTCTTTTTCTTATTTTTTTTTTCTTTCTATTTTGGTTTTTGTTTTCAGGGGCTGGATTTCTCTCTCAGGATCTCTATCTTCATGGATTCTTTAGTGCTTCCATTAAATTGCCTGCTGATTATACTGCTGGTGTTGTGGTTGCTTTTTATGTGAGTAGGATTGTGGTATTCGTTGGTTTTTTGGGAAATGCTTTGAACTCTTGTCTCTTTAATCTCTTACTAATACTCCTTCTTTTCTTTGTTTTTTTTTTAGTCCATGAGTTTCTGATAATCGGATGACGATTTTAAATTTTTAGTTACTCTCTTTTCATTTGATTTTGTTCTGGATTCTTTTACTCTGCTTTTGTGTGTGTGTGTGTGTGGTAGTAGTAGTAGGGGTTTTAAGGTTTAGGATTGTGTTAAAAGGTTAAAGGAATCTCTAAACACAGCTGTGCCTTTTTAATACGGCGTGTTTACGTGGGAGTGCTTTTAAAACTTAGTTTTAAGCAGGGCTTTTCTTTTTCAAAAAAACAATTTTTTATGGGACCTAAAAGTCTGAATGAGATTTGTAAAGTTTTTAACCTTTTGTTAGCATCAACAAACCTTTTTTCATAGTTATTATTATTATTTTTCCATTATTGTTATGGAACTCTTGCTCCTATTTTCTCTCTTGCTCCCACTTCTAACGCAATGGGGACTTGATTGGAAGTTTCCGTCAGAGGGTGAGAGCGCAAGGGAGATAATAGGGAGTGAGTGAGAGCTTAATGGAAAAGTGGGAGTGACAGCGGGAGAGAGAATAAATGGAGCAGAGAAAGAGCTAAGAGGGGAACATAGAGAGCAAGTGCAAGAGGTAGCTCAAGGAGCAAGAGCACGAGGAAAAATTAGGGAGCGAGAGCTAAAGGAAGAATAGAGTGCAGGATGCAAGTATGAAATATAAATACCAAGAATAAAGAAAGGTTTGTTAAAGCTAGCGAAGGGTTTGAAAAACATATTTTGAGACATCAAGTTAAAAGTCATTTTGCAAAATTTTTAGTTCAAATTGTTTTTCTTACATTAGAAGCAATATGGTATGGAAGCGTCTATTGACCTGTCACTGTTGTGCTTTGCTCTACACTTCCATAAAAAACACGGTCATAAAATAAATTGCTAAGTGGGCGGCCAAGCCTTTCTTTAACTGGTTAAGACATTGCTTAAAGTTAAAAACCACTTTATGAGTACATTCTTGTAAAGTTGATTGCCTTTCTAAGTATTTATTAACGAATTTTTGCATTTATGAACACTTGGAAAGTCAATCCAAACATACCTTACAATTTCTCTTAAAAACATTTATAAACCATTTTCAAACCAGATGATTTTGGGTTTACTATGTTCTTGGCTAGGACACAACCCAAAAATACCTTTAGTTGTTGGGGTTAGAAATTTGCACTATAGTTTAATTGTGTATGGACTCGACCTGTAGTTTTAGTTGGTTTGGTTCAGTTTTTTGGGTCATTTATTCAGATTTTTTCTAAAGAAAAAATAGCAAGAATATTATCCCTTTTAACTCATAGATTAGTAACTCAATGTCGTAATTGTGATGGTAGATGTCGAATGGCGATATGTTCGAGAACAACCACGACGAGATTGATTTTGAGTTTTTAGGGAACATCAGAGGTAAAGAATGGAGGGTTCAGACTAATATTTACGGCAATGGGAGCACGAATGTTGGCAGAGAAGAAAGATATGGTCTCTGGTTTGATCCAGCTGAAGATTTGCATCAGTACAGCATTCTTTGGACTGATTCTCGCATTATGTAAGCTGTTTCTTTTTCTTTTTACATTTGTTCTTAAGTTCGGAATATCCCATGTTTTGTTGTGTTATGATGTTTTGCAGATGCCATGGAGAGGAGGGTGTGAATAGTTTATTTGGAAAGTTCTTTCAGAAAGTTATATGAAATTTGGAGTTTCCCATGTTTCTAAGCTTTTAGTTATTTTGTTTTAAGCTTTCAAATTTCTGTTTTACTGCTCATTCTTCAAACGTTCTCTTTTAGTCCTACAATTACTTTGTAAAAAAGAATACATTATTTAAAATTATTCATTTTCTGTCAGCCTAAATTTGAACTTGTTTTGAAACTGGATGGGTAGAGGTAGATTACTTGGCCGGTTTGGTAACCATTTTGGTTTTGGTTTTTGAATATTGTAATTGTTCTCTCAAATTCTTACCATGTTTTTTCATCTTTTCAAGTAGAAGAATTGAATGATCTTAGCCAAAAATTAAAAAAAAAAAAGAAGCTCTTTATAAACCATTTTTTTTAGTTTTCAAAACCTGACGAGGTTTTTGAATTTTCATATAGAAAGTAGATAACAAAGTAAATAAACTTGGAGGTGGCTTTGGATTGTCGCGCTGGGATCTTTGTAGGCTTAATTTTCTGACCCTAAAAACCAAAAACCAATTGGTTACCACTGAGACCCTTTACATGTGACTTCAAACATCTGTTTACGCGTAAGCATACTCATCTATTAAAGGAGCCACAAATATCCACATTAAGTTTCTTTTTTTTTTCTTTCTAAAATGATTAATCTTATTAATTATATAATGTTTGAAAACTCAAAAAAAGAAATAAAAAATCAGAATAAGCATGAAAGTTAAAAGGATTATAATAGGACTTAAACCTTCCACATTTTGTGACCCATTAATTCATTATCAATACCTTGAATCAAAACATACTGGTCTTTATTAGTATGTCCGTAGATTATGAGGTTGAATTGCTTAAGAACTTTTATATAAATGAGTCCTTCCACTTTTCTTTTATGTGTAGATTTTATGTGGATGAAGTTCCTATAAGAGAGGTTAAAAGAACAGCTTCAATGGGTGGTGAGTTTCCATCCAAACCAATGACTTTGTATGCAACAATTTGGGATGGATCAAGCTGGGCTACCAATGGAGGCAAATACAAAGTAAACTACAAATATGCTCCCTATATTGCTGAGTTCTCTGAATTCGTATTGCACGGTTGCACAGTTGATCCGATTGAACAAGTCTTCCCCAAGTGTGACCTTACACAGATCTCCGAAGCTTCCATCCCCAATAACATCACAACGGCTAAAAGAACAAAAATGGAGAGTTTTAGGAGGAAGCACATGACATACTCATACTGCTATGATCATCTTAGATACAAGATCCCCCCTGCAGAATGTGTTCTTGATCCTCAAGAAGCCAAACGACTCCAAAGGTTCGACCCTGTAACGTTTGGAAGAGGGCGGCGACACCATGCGAAACATCGTCACTCTAGCCAGGCAGAGTTTACTTCCGTTTGATAGGGCTGGGCAGTGTTTCATTATTTTGTTTTTTGGGTAATAATTCTAGGCAGTTTGATTTTGGATGGGTCTGTTCTTTTTTGTGTATAAAAGATAGATAGACAGTTGAATGAGTATAAATTTTATTTAGGAATTAGATGTCTTTCATGTTGGTTGGTTTTATGTATAGTTAACACCATTGGGATTATCAATTGTTGTTGTTGGTTGTTGGCTTTACAGTTTTGTGAAATTGATGATGATTAAGATTTATGTTCTTTTCATGTAAGAAAGAAATGTTGTGATGAGGCTATTATATTACATTTAAAATAAAATTTTGGTATAGTGCATAAGACTAGATGGCACT

Coding sequence (CDS)

ATGTCCGTAGATTATGAGGTTGAATTGCTTAAGAACTTTTATATAAATGAGTCCTTCCACTTTTCTTTTATGTGTAGATTTTATGTGGATGAAGTTCCTATAAGAGAGGTTAAAAGAACAGCTTCAATGGGTGGTGAGTTTCCATCCAAACCAATGACTTTGTATGCAACAATTTGGGATGGATCAAGCTGGGCTACCAATGGAGGCAAATACAAAGTAAACTACAAATATGCTCCCTATATTGCTGAGTTCTCTGAATTCGTATTGCACGGTTGCACAGTTGATCCGATTGAACAAGTCTTCCCCAAGTGTGACCTTACACAGATCTCCGAAGCTTCCATCCCCAATAACATCACAACGGCTAAAAGAACAAAAATGGAGAGTTTTAGGAGGAAGCACATGACATACTCATACTGCTATGATCATCTTAGATACAAGATCCCCCCTGCAGAATGTGTTCTTGATCCTCAAGAAGCCAAACGACTCCAAAGGTTCGACCCTGTAACGTTTGGAAGAGGGCGGCGACACCATGCGAAACATCGTCACTCTAGCCAGGCAGAGTTTACTTCCGTTTGA

Protein sequence

MSVDYEVELLKNFYINESFHFSFMCRFYVDEVPIREVKRTASMGGEFPSKPMTLYATIWDGSSWATNGGKYKVNYKYAPYIAEFSEFVLHGCTVDPIEQVFPKCDLTQISEASIPNNITTAKRTKMESFRRKHMTYSYCYDHLRYKIPPAECVLDPQEAKRLQRFDPVTFGRGRRHHAKHRHSSQAEFTSV
Homology
[Close]
BLAST of Cucsat.G4415 vs. ExPASy Swiss-Prot
Match: Q8LDS2 (Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis thaliana OX=3702 GN=XTH27 PE=2 SV=2)

HSP 1 Score: 109.4 bits (272), Expect = 3.6e-23
Identity = 53/71 (74.65%), Postives = 58/71 (81.69%), Query Frame = 0 

Query: 65  NLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDERTGAGFLSQDLYLHGFFSASIKLPA 124
           NLPI SF E+Y  LFGD NL +   GKSV L LDERTG+GF+S D YLHGFFSASIKLP+
Sbjct: 25  NLPITSFEESYTQLFGDKNLFVHQDGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPS 84

Query: 125 DYTAGVVVAFY 136
           DYTAGVVVAFY
Sbjct: 85  DYTAGVVVAFY 95

[Close]
BLAST of Cucsat.G4415 vs. ExPASy Swiss-Prot
Match: Q38909 (Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis thaliana OX=3702 GN=XTH28 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 6.8e-22
Identity = 55/96 (57.29%), Postives = 68/96 (70.83%), Query Frame = 0 

Query: 40  MGFSSFTFLSFLLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDE 99
           MGF +  FL F+ L        +   LP++ F E Y  LFGD NL++   GKSV L LDE
Sbjct: 1   MGFIT-RFLVFMSLFTSLVSGFALQKLPLIQFDEGYTQLFGDQNLIVHRDGKSVRLTLDE 60

Query: 100 RTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 136
           RTG+GF+S D+YLHGFFS+SIKLPADY+AGVV+AFY
Sbjct: 61  RTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFY 95

[Close]
BLAST of Cucsat.G4415 vs. ExPASy Swiss-Prot
Match: Q38908 (Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis thaliana OX=3702 GN=XTH30 PE=2 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 5.1e-17
Identity = 50/96 (52.08%), Postives = 64/96 (66.67%), Query Frame = 0 

Query: 40  MGFSSFTFLSFLLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDE 99
           M  SS+  +  L+L      S + +NL  LSF E+ + LFGDANL+      SV L LD 
Sbjct: 1   MSKSSYNHIFILILCLCLRSSSAFTNLNTLSFEESLSPLFGDANLVRSPDDLSVRLLLDR 60

Query: 100 RTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 136
            TG+GF+S ++Y HGF+S+ IKLPADYTAGVVVAFY
Sbjct: 61  YTGSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFY 96

[Close]
BLAST of Cucsat.G4415 vs. ExPASy Swiss-Prot
Match: Q8L7H3 (Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis thaliana OX=3702 GN=XTH29 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.3e-14
Identity = 38/71 (53.52%), Postives = 50/71 (70.42%), Query Frame = 0 

Query: 65  NLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDERTGAGFLSQDLYLHGFFSASIKLPA 124
           N+  + F E  +HLFG+ NL+     +SV L LD+ TG+GF+S  +Y HGFFS+ IKLP 
Sbjct: 34  NINPIFFDEGLSHLFGEGNLIRSPDDRSVRLLLDKYTGSGFISSSMYQHGFFSSLIKLPG 93

Query: 125 DYTAGVVVAFY 136
            YTAG+VVAFY
Sbjct: 94  AYTAGIVVAFY 104

[Close]
BLAST of Cucsat.G4415 vs. ExPASy Swiss-Prot
Match: Q9SV61 (Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thaliana OX=3702 GN=XTH1 PE=3 SV=3)

HSP 1 Score: 66.2 bits (160), Expect = 3.5e-10
Identity = 34/78 (43.59%), Postives = 47/78 (60.26%), Query Frame = 0 

Query: 69  LSFHEAYNHLFGDANLLLLNHGKSVHLHLDERTGAGFLSQDLYLHGFFSASIKLPADYTA 128
           + F + Y   +G  N+L LN GK V L LD  +G+GF S++ Y  GFF   IK+P   T+
Sbjct: 37  VGFDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKDTS 96

Query: 129 GVVVAFYFPSEGESAREI 147
           GVV AFY  S+G +  E+
Sbjct: 97  GVVTAFYLTSKGNTHDEV 114

[Close]
BLAST of Cucsat.G4415 vs. NCBI nr
Match: CCH26641.1 (putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus])

HSP 1 Score: 192 bits (489), Expect = 1.02e-57
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0 

Query: 40  MGFSSFTFLSFLLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDE 99
           MGFSSFTFLSFLLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDE
Sbjct: 1   MGFSSFTFLSFLLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDE 60

Query: 100 RTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 135
           RTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY
Sbjct: 61  RTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 96

[Close]
BLAST of Cucsat.G4415 vs. NCBI nr
Match: XP_004142294.1 (probable xyloglucan endotransglucosylase/hydrolase protein 28 [Cucumis sativus] >KGN49677.1 hypothetical protein Csa_018522 [Cucumis sativus])

HSP 1 Score: 192 bits (489), Expect = 1.02e-57
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0 

Query: 40  MGFSSFTFLSFLLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDE 99
           MGFSSFTFLSFLLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDE
Sbjct: 1   MGFSSFTFLSFLLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDE 60

Query: 100 RTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 135
           RTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY
Sbjct: 61  RTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 96

[Close]
BLAST of Cucsat.G4415 vs. NCBI nr
Match: XP_008454733.1 (PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 28 [Cucumis melo])

HSP 1 Score: 169 bits (427), Expect = 2.47e-48
Identity = 90/103 (87.38%), Postives = 92/103 (89.32%), Query Frame = 0 

Query: 40  MGFSSFTFLSF-------LLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKS 99
           MGFSSFTFL F       LLLLPFSS SPS  NLP+LSFHEAYNHLFGDANLLLLNHGKS
Sbjct: 1   MGFSSFTFLCFSLLPSFLLLLLPFSSSSPS--NLPVLSFHEAYNHLFGDANLLLLNHGKS 60

Query: 100 VHLHLDERTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 135
           VHL+LDERTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY
Sbjct: 61  VHLYLDERTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 101

[Close]
BLAST of Cucsat.G4415 vs. NCBI nr
Match: XP_038891480.1 (probable xyloglucan endotransglucosylase/hydrolase protein 28 [Benincasa hispida])

HSP 1 Score: 160 bits (405), Expect = 4.39e-45
Identity = 87/102 (85.29%), Postives = 88/102 (86.27%), Query Frame = 0 

Query: 40  MGFSSFTFLSF------LLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSV 99
           MGFSS TFL F      L LLPF+S SPS  NLPILSF EAYNHLFGDANLLLLN GKSV
Sbjct: 1   MGFSSLTFLCFSFFSFLLFLLPFASSSPS--NLPILSFQEAYNHLFGDANLLLLNDGKSV 60

Query: 100 HLHLDERTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 135
           HLHLDERTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY
Sbjct: 61  HLHLDERTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 100

[Close]
BLAST of Cucsat.G4415 vs. NCBI nr
Match: XP_023513342.1 (probable xyloglucan endotransglucosylase/hydrolase protein 28 [Cucurbita pepo subsp. pepo] >XP_023513354.1 probable xyloglucan endotransglucosylase/hydrolase protein 28 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 143 bits (361), Expect = 1.68e-38
Identity = 79/101 (78.22%), Postives = 83/101 (82.18%), Query Frame = 0 

Query: 40  MGFSSFTFLSF-----LLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSVH 99
           M FSSF+FL F     LLLLP SS   SP NLPIL F EAY HLFGD NLL+L  GKSVH
Sbjct: 1   MAFSSFSFLCFPLSFILLLLPSSS---SPPNLPILFFDEAYTHLFGDHNLLVLKDGKSVH 60

Query: 100 LHLDERTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 135
           LHLDERTGAGF+SQDLYLHGFFSASIKLPADY+AGVVVAFY
Sbjct: 61  LHLDERTGAGFVSQDLYLHGFFSASIKLPADYSAGVVVAFY 98

[Close]
BLAST of Cucsat.G4415 vs. ExPASy TrEMBL
Match: A0A0A0KMP2 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=Csa_5G057140 PE=3 SV=1)

HSP 1 Score: 192 bits (489), Expect = 4.95e-58
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0 

Query: 40  MGFSSFTFLSFLLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDE 99
           MGFSSFTFLSFLLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDE
Sbjct: 1   MGFSSFTFLSFLLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDE 60

Query: 100 RTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 135
           RTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY
Sbjct: 61  RTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 96

[Close]
BLAST of Cucsat.G4415 vs. ExPASy TrEMBL
Match: N0DX43 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=xth31 PE=3 SV=1)

HSP 1 Score: 192 bits (489), Expect = 4.95e-58
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0 

Query: 40  MGFSSFTFLSFLLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDE 99
           MGFSSFTFLSFLLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDE
Sbjct: 1   MGFSSFTFLSFLLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDE 60

Query: 100 RTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 135
           RTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY
Sbjct: 61  RTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 96

[Close]
BLAST of Cucsat.G4415 vs. ExPASy TrEMBL
Match: A0A1S3C021 (Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo OX=3656 GN=LOC103495069 PE=3 SV=1)

HSP 1 Score: 169 bits (427), Expect = 1.19e-48
Identity = 90/103 (87.38%), Postives = 92/103 (89.32%), Query Frame = 0 

Query: 40  MGFSSFTFLSF-------LLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKS 99
           MGFSSFTFL F       LLLLPFSS SPS  NLP+LSFHEAYNHLFGDANLLLLNHGKS
Sbjct: 1   MGFSSFTFLCFSLLPSFLLLLLPFSSSSPS--NLPVLSFHEAYNHLFGDANLLLLNHGKS 60

Query: 100 VHLHLDERTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 135
           VHL+LDERTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY
Sbjct: 61  VHLYLDERTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 101

[Close]
BLAST of Cucsat.G4415 vs. ExPASy TrEMBL
Match: A0A6J1FUV1 (Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita moschata OX=3662 GN=LOC111447484 PE=3 SV=1)

HSP 1 Score: 142 bits (358), Expect = 1.94e-38
Identity = 78/101 (77.23%), Postives = 83/101 (82.18%), Query Frame = 0 

Query: 40  MGFSSFTFLSF-----LLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSVH 99
           M FSSF+FL F     LLLLP SS   SP NLPIL F EAY HLFGD NLL+L  GKSVH
Sbjct: 1   MAFSSFSFLCFPLSFILLLLPSSS---SPPNLPILFFDEAYTHLFGDDNLLVLKDGKSVH 60

Query: 100 LHLDERTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 135
           LHLD+RTGAGF+SQDLYLHGFFSASIKLPADY+AGVVVAFY
Sbjct: 61  LHLDQRTGAGFVSQDLYLHGFFSASIKLPADYSAGVVVAFY 98

[Close]
BLAST of Cucsat.G4415 vs. ExPASy TrEMBL
Match: A0A6J1JKQ1 (Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita maxima OX=3661 GN=LOC111485295 PE=3 SV=1)

HSP 1 Score: 141 bits (355), Expect = 8.91e-38
Identity = 78/101 (77.23%), Postives = 82/101 (81.19%), Query Frame = 0 

Query: 40  MGFSSFTFLSF-----LLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSVH 99
           M  SSF+FL F     LLLLP SS   SP NLPIL F EAY HLFGD NLL+L  GKSVH
Sbjct: 1   MALSSFSFLCFPLSFILLLLPSSS---SPPNLPILFFDEAYTHLFGDDNLLVLKDGKSVH 60

Query: 100 LHLDERTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 135
           LHLDERTGAGF+SQDLYLHGFFSASIKLPADY+AGVVVAFY
Sbjct: 61  LHLDERTGAGFVSQDLYLHGFFSASIKLPADYSAGVVVAFY 98

[Close]
BLAST of Cucsat.G4415 vs. TAIR 10
Match: AT2G01850.1 (endoxyloglucan transferase A3 )

HSP 1 Score: 109.4 bits (272), Expect = 2.6e-24
Identity = 53/71 (74.65%), Postives = 58/71 (81.69%), Query Frame = 0 

Query: 65  NLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDERTGAGFLSQDLYLHGFFSASIKLPA 124
           NLPI SF E+Y  LFGD NL +   GKSV L LDERTG+GF+S D YLHGFFSASIKLP+
Sbjct: 25  NLPITSFEESYTQLFGDKNLFVHQDGKSVRLTLDERTGSGFVSNDYYLHGFFSASIKLPS 84

Query: 125 DYTAGVVVAFY 136
           DYTAGVVVAFY
Sbjct: 85  DYTAGVVVAFY 95

[Close]
BLAST of Cucsat.G4415 vs. TAIR 10
Match: AT1G14720.1 (xyloglucan endotransglucosylase/hydrolase 28 )

HSP 1 Score: 105.1 bits (261), Expect = 4.8e-23
Identity = 55/96 (57.29%), Postives = 68/96 (70.83%), Query Frame = 0 

Query: 40  MGFSSFTFLSFLLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDE 99
           MGF +  FL F+ L        +   LP++ F E Y  LFGD NL++   GKSV L LDE
Sbjct: 1   MGFIT-RFLVFMSLFTSLVSGFALQKLPLIQFDEGYTQLFGDQNLIVHRDGKSVRLTLDE 60

Query: 100 RTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 136
           RTG+GF+S D+YLHGFFS+SIKLPADY+AGVV+AFY
Sbjct: 61  RTGSGFVSNDIYLHGFFSSSIKLPADYSAGVVIAFY 95

[Close]
BLAST of Cucsat.G4415 vs. TAIR 10
Match: AT1G32170.1 (xyloglucan endotransglucosylase/hydrolase 30 )

HSP 1 Score: 89.0 bits (219), Expect = 3.6e-18
Identity = 50/96 (52.08%), Postives = 64/96 (66.67%), Query Frame = 0 

Query: 40  MGFSSFTFLSFLLLLPFSSPSPSPSNLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDE 99
           M  SS+  +  L+L      S + +NL  LSF E+ + LFGDANL+      SV L LD 
Sbjct: 1   MSKSSYNHIFILILCLCLRSSSAFTNLNTLSFEESLSPLFGDANLVRSPDDLSVRLLLDR 60

Query: 100 RTGAGFLSQDLYLHGFFSASIKLPADYTAGVVVAFY 136
            TG+GF+S ++Y HGF+S+ IKLPADYTAGVVVAFY
Sbjct: 61  YTGSGFISSNMYQHGFYSSMIKLPADYTAGVVVAFY 96

[Close]
BLAST of Cucsat.G4415 vs. TAIR 10
Match: AT4G18990.1 (xyloglucan endotransglucosylase/hydrolase 29 )

HSP 1 Score: 80.1 bits (196), Expect = 1.7e-15
Identity = 38/71 (53.52%), Postives = 50/71 (70.42%), Query Frame = 0 

Query: 65  NLPILSFHEAYNHLFGDANLLLLNHGKSVHLHLDERTGAGFLSQDLYLHGFFSASIKLPA 124
           N+  + F E  +HLFG+ NL+     +SV L LD+ TG+GF+S  +Y HGFFS+ IKLP 
Sbjct: 34  NINPIFFDEGLSHLFGEGNLIRSPDDRSVRLLLDKYTGSGFISSSMYQHGFFSSLIKLPG 93

Query: 125 DYTAGVVVAFY 136
            YTAG+VVAFY
Sbjct: 94  AYTAGIVVAFY 104

[Close]
BLAST of Cucsat.G4415 vs. TAIR 10
Match: AT4G13080.1 (xyloglucan endotransglucosylase/hydrolase 1 )

HSP 1 Score: 66.2 bits (160), Expect = 2.5e-11
Identity = 34/78 (43.59%), Postives = 47/78 (60.26%), Query Frame = 0 

Query: 69  LSFHEAYNHLFGDANLLLLNHGKSVHLHLDERTGAGFLSQDLYLHGFFSASIKLPADYTA 128
           + F + Y   +G  N+L LN GK V L LD  +G+GF S++ Y  GFF   IK+P   T+
Sbjct: 34  VGFDDNYVVTWGQNNVLKLNQGKEVQLSLDHSSGSGFESKNHYESGFFQIRIKVPPKDTS 93

Query: 129 GVVVAFYFPSEGESAREI 147
           GVV AFY  S+G +  E+
Sbjct: 94  GVVTAFYLTSKGNTHDEV 111

The following BLAST results are available for this feature:
BLAST of Cucsat.G4415 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LDS23.6e-2374.65Probable xyloglucan endotransglucosylase/hydrolase protein 27 OS=Arabidopsis tha... [more]
Q389096.8e-2257.29Probable xyloglucan endotransglucosylase/hydrolase protein 28 OS=Arabidopsis tha... [more]
Q389085.1e-1752.08Probable xyloglucan endotransglucosylase/hydrolase protein 30 OS=Arabidopsis tha... [more]
Q8L7H32.3e-1453.52Probable xyloglucan endotransglucosylase/hydrolase protein 29 OS=Arabidopsis tha... [more]
Q9SV613.5e-1043.59Putative xyloglucan endotransglucosylase/hydrolase protein 1 OS=Arabidopsis thal... [more]
BLAST of Cucsat.G4415 vs. NCBI nr
Match NameE-valueIdentityDescription
CCH26641.11.02e-57100.00putative xyloglucan endotransglucosylase/hydrolase [Cucumis sativus][more]
XP_004142294.11.02e-57100.00probable xyloglucan endotransglucosylase/hydrolase protein 28 [Cucumis sativus] ... [more]
XP_008454733.12.47e-4887.38PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 28 [Cucumi... [more]
XP_038891480.14.39e-4585.29probable xyloglucan endotransglucosylase/hydrolase protein 28 [Benincasa hispida... [more]
XP_023513342.11.68e-3878.22probable xyloglucan endotransglucosylase/hydrolase protein 28 [Cucurbita pepo su... [more]
BLAST of Cucsat.G4415 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMP24.95e-58100.00Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=Csa_5G05... [more]
N0DX434.95e-58100.00Xyloglucan endotransglucosylase/hydrolase OS=Cucumis sativus OX=3659 GN=xth31 PE... [more]
A0A1S3C0211.19e-4887.38Xyloglucan endotransglucosylase/hydrolase OS=Cucumis melo OX=3656 GN=LOC10349506... [more]
A0A6J1FUV11.94e-3877.23Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
A0A6J1JKQ18.91e-3877.23Xyloglucan endotransglucosylase/hydrolase OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
BLAST of Cucsat.G4415 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G01850.12.6e-2474.65endoxyloglucan transferase A3 [more]
AT1G14720.14.8e-2357.29xyloglucan endotransglucosylase/hydrolase 28 [more]
AT1G32170.13.6e-1852.08xyloglucan endotransglucosylase/hydrolase 30 [more]
AT4G18990.11.7e-1553.52xyloglucan endotransglucosylase/hydrolase 29 [more]
AT4G13080.12.5e-1143.59xyloglucan endotransglucosylase/hydrolase 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000757Glycoside hydrolase family 16PFAMPF00722Glyco_hydro_16coord: 3..120
e-value: 7.8E-38
score: 129.7
IPR000757Glycoside hydrolase family 16PROSITEPS51762GH16_2coord: 1..128
score: 21.120152
IPR010713Xyloglucan endo-transglycosylase, C-terminalPFAMPF06955XET_Ccoord: 161..196
e-value: 3.8E-13
score: 49.1
NoneNo IPR availableGENE3D2.60.120.200coord: 1..196
e-value: 1.8E-67
score: 229.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 216..235
NoneNo IPR availablePANTHERPTHR31062:SF235XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 27-RELATEDcoord: 1..217
IPR016455Xyloglucan endotransglucosylase/hydrolasePIRSFPIRSF005604EndGlu_transfcoord: 1..201
e-value: 6.2E-83
score: 276.2
IPR044791Beta-glucanase/XTHPANTHERPTHR31062XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATEDcoord: 1..217
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 9..200

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G4415.T1Cucsat.G4415.T1mRNA
Cucsat.G4415.T2Cucsat.G4415.T2mRNA
Cucsat.G4415.T11Cucsat.G4415.T11mRNA
Cucsat.G4415.T10Cucsat.G4415.T10mRNA
Cucsat.G4415.T3Cucsat.G4415.T3mRNA
Cucsat.G4415.T7Cucsat.G4415.T7mRNA
Cucsat.G4415.T6Cucsat.G4415.T6mRNA
Cucsat.G4415.T5Cucsat.G4415.T5mRNA
Cucsat.G4415.T4Cucsat.G4415.T4mRNA
Cucsat.G4415.T8Cucsat.G4415.T8mRNA
Cucsat.G4415.T9Cucsat.G4415.T9mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042546 cell wall biogenesis
biological_process GO:0071555 cell wall organization
biological_process GO:0010411 xyloglucan metabolic process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006073 cellular glucan metabolic process
cellular_component GO:0048046 apoplast
cellular_component GO:0005618 cell wall
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0016762 xyloglucan:xyloglucosyl transferase activity