Cucsat.G4325 (gene) Cucumber (B10) v3

Overview
NameCucsat.G4325
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionPLASMODESMATA CALLOSE-BINDING PROTEIN 3-like
Locationctg1170: 637615 .. 638783 (+)
RNA-Seq ExpressionCucsat.G4325
SyntenyCucsat.G4325
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTGAAATCCTAAAATTTTTGGCTTCAGAGTCCAAAGTGAGCAAATTTTTATACTCTTTAACCCAAAATAGTTCATTGTTGAAACAAATAATGTTTTAACTTTTGGAAGTATAAAATTATCTAGAAATATCATAACTGAAAAAGTAGGATAGAAGAGAGAAAAAAAAAGGTGAATAGAGACACACTGGCACCGCCCTCTACATTCTCTTCCTCACTAGAAATCTCCATTGTCCCATAATTCTCTTTTTCTTTCTCTCTCTTTTTTCCGGTTTTGCCACTTCTCTTAAATCCACAATTCTTCTCTTCTCTCATCTGTACTCTCTCAGAATCTTTCCTCAACCATGGCGGTTCTCTTGCTCTGTTATCTGATATTCTTGGCCTTCACTTCCCATTCAAGTAAGCTTCTGGAATCTTCATTTTCATTTCTTGGTTTTGTTTACTGGCTTCCATTTGAAGTTTTTCTGCAGCTTAAAATGAGGTTTTACACAAGAATCGTTGAAACCCTCTGAAGGGTTTTCAAGAAATCAGTGGAAATTAGAAAATAAGCTGTTGGATTAATTTTTTTTTTAAAAAATCTGATGAACCCTTTTTCTGGAATCTTGTTTAGGTGCTACTTATTGCATTTGTAAAGATGGACTGAGTGATCAAGCCCTTCAGAAAAGTTTGGATTATGCTTGTGGAGCTGGAGCTGATTGTACACCAATCCTTCAAAATGGCCCTTGTTATCAACCCAATACTGTGAAAGATCATTGCAGTTATGCTGTTAATAGCTATTTTCAAAGAAAGGGTCAGGTTCAAGGGAGTTGTGATTTTTCAGGCACTGCCTCGCCTAGCCAATCTCCTCCTGGTATTAGATTTTTATTTTCCATTTTTACTCATCTTCTTCATCAATTGGTTCTTTTTTTTGTTACTTACCATTTCTTTTGGGTCTTTTCTTGTTTTTCTTGTGTTTTTTCTTTTACAGCCGTAGCTTCTGGGTGTGTTTATCCTTCCAGTCCCAGGTACCCATTTCAATTTCTTCACTCTGATCTTTCAGTTTTTGAAGAATTGATCTCACATTCAACTTTTTAGATTGTGTTTTTCTGTTCAACAATGTTCAAAATGGAAAGTGGGCTTGAGTTGAATATTTTGTTTAATAAGAAACAAAGACTACCTGAGAATCAATGTTTTGGATGAGTTGAAATTTGAAAAGGTTTAAGGAAAAGTAAAGCACTGGTCTCTTAAACAATCCTCAAATATCTCCATTTTTTTTTACTGAGAATTTGTTTCTCAAAGTGGCATATTCCAATGACTTTTTTTAACCCAAAGTTGTCTTTTTTTTTTTTAAACTTTTCGAGTTGGTGTTGGTGAGAATCTTCTGCTTGATGTAAGAAAAGAAAAGAAAGTAAAAAAAAAAAAAATCTATCAAGAATCCAATTCCCTTCCCCTTCTTTCTCAATGATCAAGCTTGGCTTTATTGAATATCTTTTCCCCTTGGAAAGTTACAATTGTTGAAAATGTTTTTGTAATATATTACTTTGGATTATCTTATGGGTAGAATCTGTTAACAAATTAACTTTTAGTTTTGCAGTCTCCCTCTCACAGTTTCTAAACTGTAGATATGATCTATTAATATCATTGATAATGTCTAAAACCGCTTCTTCTAACTGTTGCAACTTGCTAGACTAAGAATACAAGCTGTCTGATGTTGATATGGTTTTTCTTTGTCATCTCTGTCCTCTTCTTTCTCCAAGATAATAGCTCTATTGTTACACACTTGTCTTGTGTTCAAACCCCTACAATGATATTTTCACTTGTTGAGCCTTCTACAAATCACTAAGCTCAACATGTGAGAGAGGTGTTGAAAGTGTTGATATAATATTAAATTTATTGTCACCAGTTAACTTAAGCTTTCATGTCAATCGATAATTTTCAAACACTCATTTCCTTTTTCCTTTCCCTTTCTTTTCAGTTTCACAGGTACCCCGACTAGCACCACCCCATCAACCACTCCATCAACCACCATTCCCGGCACGACACCAGGAACCACAACAAACCCATCAACAACACCACCGTCGACAACAACTCCTGGCACAACCTCCCCTTCAGTGTTCGGGAATGGGATAAGCCCAACAGGTGGTGTCGGTCTGGGCGGGAACAGTATGGATGGCAGTGCTGCTGCAGGTCTCAATGCAGCAGCCTCTAACTTGTTCTTCTTCACAGCTACTGTGACATTTTGGTTGTCAATGTTCTGTTAGGTTAACCATGATGGAGGCCATTAGTTGATTTGTTTGGATGAATGGATGGATGGAAGGAAAAGCTAGGAAGGTTGTTTTCTAATGTCCTTTGCTGTGGAAAGGAAAAAAGAAAAAGAAAAGAAGAAGAAAAGGGTGGAGAATTTGATTCCTTATTGAGTGGTGGTATGATTTTCTACTAGAATGGAACCTGATCCTCTTAGATATTTTTCACTTTTGTGTATCTAATAGAGGCTGTATTTTCCTTAATTTAATGGGACTTTGTACCCACTAATCAATAATTCTGCTCTTTTGTTCATTATTAATTTCTTCATTTAATAATAAAGTCGTATGAGTTGTGTTACTCAATATGCTCTAAGTAAGTAGTTTATGGGAATTTGATTATGGTAAATATAGTTTTAAGATTTATATAAGGTCCATATTTATGAGGTGAATGGATGACAACATGGGTGGGACAAGAAATG

Coding sequence (CDS)

ATGGCGGTTCTCTTGCTCTGTTATCTGATATTCTTGGCCTTCACTTCCCATTCAAGTGCTACTTATTGCATTTGTAAAGATGGACTGAGTGATCAAGCCCTTCAGAAAAGTTTGGATTATGCTTGTGGAGCTGGAGCTGATTGTACACCAATCCTTCAAAATGGCCCTTGTTATCAACCCAATACTGTGAAAGATCATTGCAGTTATGCTGTTAATAGCTATTTTCAAAGAAAGGGTCAGGTTCAAGGGAGTTGTGATTTTTCAGGCACTGCCTCGCCTAGCCAATCTCCTCCTGCCGTAGCTTCTGGGTGTGTTTATCCTTCCAGTCCCAGTTTCACAGGTACCCCGACTAGCACCACCCCATCAACCACTCCATCAACCACCATTCCCGGCACGACACCAGGAACCACAACAAACCCATCAACAACACCACCGTCGACAACAACTCCTGGCACAACCTCCCCTTCAGTGTTCGGGAATGGGATAAGCCCAACAGGTGGTGTCGGTCTGGGCGGGAACAGTATGGATGGCAGTGCTGCTGCAGGTCTCAATGCAGCAGCCTCTAACTTGTTCTTCTTCACAGCTACTGTGACATTTTGGTTGTCAATGTTCTGTTAG

Protein sequence

MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQPNTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSPSFTGTPTSTTPSTTPSTTIPGTTPGTTTNPSTTPPSTTTPGTTSPSVFGNGISPTGGVGLGGNSMDGSAAAGLNAAASNLFFFTATVTFWLSMFC
Homology
[Close]
BLAST of Cucsat.G4325 vs. ExPASy Swiss-Prot
Match: Q9FZ86 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3 PE=1 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.9e-32
Identity = 68/109 (62.39%), Postives = 85/109 (77.98%), Query Frame = 0 

Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60
           MAV +L  +I LA   HSS T+C+CK+GLS+  LQK+LDYACGAGADC PI Q GPC+ P
Sbjct: 1   MAVFVL-VMILLAMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSS 110
           NTVK HCSYAVNS+FQ+KGQ  G+CDF+GTA+ S S P+  + C +P+S
Sbjct: 61  NTVKSHCSYAVNSFFQKKGQSLGTCDFAGTATFSASDPSYTT-CPFPAS 107

[Close]
BLAST of Cucsat.G4325 vs. ExPASy Swiss-Prot
Match: Q93V72 (PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 5.6e-28
Identity = 63/109 (57.80%), Postives = 80/109 (73.39%), Query Frame = 0 

Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60
           M+VLL   LI   FT +S+A YC+CK+G ++Q LQK++DYACG GADCT I   G CYQP
Sbjct: 1   MSVLLPLCLIISMFT-YSNAAYCLCKEG-NEQVLQKAIDYACGNGADCTQIQPTGACYQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSS 110
           NTVK+HC  AVNSY+Q+K     +CDF+G ASPS +PP+ AS C+  SS
Sbjct: 61  NTVKNHCDVAVNSYYQKKASSGATCDFNGAASPSTTPPSTASNCLTGSS 107

[Close]
BLAST of Cucsat.G4325 vs. ExPASy Swiss-Prot
Match: Q9FNQ2 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 9.6e-28
Identity = 59/109 (54.13%), Postives = 79/109 (72.48%), Query Frame = 0 

Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60
           MA L+L  L+ L+   HSSA++C+CK GLSD  LQ +LDYACG GADC P      C+ P
Sbjct: 1   MAALVLS-LLLLSLAGHSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSS 110
           + V+ HC+YAVNS+FQ+KGQ  GSC+F GTA+P+ S P+  +GC +P+S
Sbjct: 61  DNVRSHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSY-TGCAFPTS 107

[Close]
BLAST of Cucsat.G4325 vs. ExPASy Swiss-Prot
Match: Q9SD84 (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-27
Identity = 56/105 (53.33%), Postives = 77/105 (73.33%), Query Frame = 0 

Query: 5   LLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQPNTVK 64
           L+ YL+ L    H+SA++C+CK GLSD  LQK+LDYACG GADC P    G C+ P+ V+
Sbjct: 4   LVLYLLTLLMAGHTSASWCVCKTGLSDSVLQKTLDYACGNGADCNPTHPKGSCFNPDNVR 63

Query: 65  DHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSS 110
            HC+YAVNS+FQ+KGQ   SC+F+GTA+ + + P+  +GC +PSS
Sbjct: 64  AHCNYAVNSFFQKKGQASESCNFTGTATLTTTDPSY-TGCAFPSS 107

[Close]
BLAST of Cucsat.G4325 vs. ExPASy Swiss-Prot
Match: Q9FZD0 (Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=3702 GN=At1g26450 PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 1.9e-23
Identity = 56/109 (51.38%), Postives = 73/109 (66.97%), Query Frame = 0 

Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60
           MAVLL  +L+   FT +S+A  C+CKD  ++  LQK +D+ACG GADC  I   G CYQP
Sbjct: 1   MAVLLPLFLLSFMFT-YSNAAVCVCKDA-NELDLQKVIDFACGGGADCAQIQTTGACYQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSS 110
           NT+K+HC  AVNSY+Q+K     +CDF+G A  S SPP+  S C+  SS
Sbjct: 61  NTLKNHCDVAVNSYYQKKASTGATCDFNGAAVISTSPPSTTSSCLSSSS 107

[Close]
BLAST of Cucsat.G4325 vs. NCBI nr
Match: XP_004144176.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus] >XP_031742380.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis sativus] >KAE8647252.1 hypothetical protein Csa_018278 [Cucumis sativus] >KGN47648.1 hypothetical protein Csa_018913 [Cucumis sativus])

HSP 1 Score: 227 bits (578), Expect = 3.71e-73
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60
           MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSPRY 112
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSP +
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSPSF 112

[Close]
BLAST of Cucsat.G4325 vs. NCBI nr
Match: KAG6598636.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 221 bits (563), Expect = 5.09e-72
Identity = 110/124 (88.71%), Postives = 115/124 (92.74%), Query Frame = 0 

Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60
           MAVLLLCYLIFLAFTSHSSA+YCICKDG SDQALQK+LDYACGAGADCTPILQNGPC+QP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSPRYPFQFLHSD 120
           NT+KDHCSYAVNSYFQRKGQVQGSCDFSGTA  SQSPP  ASGCVY SS RYPFQF HS 
Sbjct: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSSSRYPFQFPHS- 120

Query: 121 LSVF 124
           L+VF
Sbjct: 121 LAVF 123

[Close]
BLAST of Cucsat.G4325 vs. NCBI nr
Match: XP_038886488.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida])

HSP 1 Score: 220 bits (561), Expect = 1.26e-70
Identity = 107/112 (95.54%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60
           MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCT ILQNGPC+QP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTAILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSPRY 112
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTA PSQSPPAVASGCVYPSSP +
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSF 112

[Close]
BLAST of Cucsat.G4325 vs. NCBI nr
Match: XP_008445454.1 (PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis melo] >KAA0064762.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 219 bits (557), Expect = 5.82e-70
Identity = 106/112 (94.64%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60
           MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADC+ ILQNGPC+QP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSPRY 112
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTA PSQSPPAVASGCVYPSSP +
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSF 112

[Close]
BLAST of Cucsat.G4325 vs. NCBI nr
Match: XP_022131475.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Momordica charantia])

HSP 1 Score: 211 bits (537), Expect = 6.41e-67
Identity = 99/110 (90.00%), Postives = 106/110 (96.36%), Query Frame = 0 

Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60
           MA++LLCYL+F+AFT HSSATYC+CKDG SDQALQKSLDYACGAGADCTPILQNGPC+QP
Sbjct: 1   MAIILLCYLLFMAFTGHSSATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSP 110
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTA+PS SPPA ASGCVYPSSP
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTATPSPSPPAGASGCVYPSSP 110

[Close]
BLAST of Cucsat.G4325 vs. ExPASy TrEMBL
Match: A0A0A0KDN8 (X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366460 PE=4 SV=1)

HSP 1 Score: 227 bits (578), Expect = 1.80e-73
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60
           MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSPRY 112
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSP +
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSPSF 112

[Close]
BLAST of Cucsat.G4325 vs. ExPASy TrEMBL
Match: A0A5A7V8S9 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00670 PE=4 SV=1)

HSP 1 Score: 219 bits (557), Expect = 2.82e-70
Identity = 106/112 (94.64%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60
           MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADC+ ILQNGPC+QP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSPRY 112
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTA PSQSPPAVASGCVYPSSP +
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSF 112

[Close]
BLAST of Cucsat.G4325 vs. ExPASy TrEMBL
Match: A0A1S3BDH0 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo OX=3656 GN=LOC103488471 PE=4 SV=1)

HSP 1 Score: 219 bits (557), Expect = 2.82e-70
Identity = 106/112 (94.64%), Postives = 109/112 (97.32%), Query Frame = 0 

Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60
           MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADC+ ILQNGPC+QP
Sbjct: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCSQILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSPRY 112
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTA PSQSPPAVASGCVYPSSP +
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTAMPSQSPPAVASGCVYPSSPSF 112

[Close]
BLAST of Cucsat.G4325 vs. ExPASy TrEMBL
Match: A0A6J1BPT8 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Momordica charantia OX=3673 GN=LOC111004672 PE=4 SV=1)

HSP 1 Score: 211 bits (537), Expect = 3.10e-67
Identity = 99/110 (90.00%), Postives = 106/110 (96.36%), Query Frame = 0 

Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60
           MA++LLCYL+F+AFT HSSATYC+CKDG SDQALQKSLDYACGAGADCTPILQNGPC+QP
Sbjct: 1   MAIILLCYLLFMAFTGHSSATYCVCKDGQSDQALQKSLDYACGAGADCTPILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSSP 110
           NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTA+PS SPPA ASGCVYPSSP
Sbjct: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTATPSPSPPAGASGCVYPSSP 110

[Close]
BLAST of Cucsat.G4325 vs. ExPASy TrEMBL
Match: A0A6J1HDW5 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LOC111462671 PE=4 SV=1)

HSP 1 Score: 202 bits (513), Expect = 1.14e-63
Identity = 98/109 (89.91%), Postives = 103/109 (94.50%), Query Frame = 0 

Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60
           MAVLLLC+LIFLAFTSHSSA+YCICKDG SDQALQK+LDYACGAGADCTPILQNGPC+QP
Sbjct: 1   MAVLLLCHLIFLAFTSHSSASYCICKDGQSDQALQKTLDYACGAGADCTPILQNGPCFQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSS 109
           NT+KDHCSYAVNSYFQRKGQVQGSCDFSGTA  SQSPP  ASGCVY SS
Sbjct: 61  NTIKDHCSYAVNSYFQRKGQVQGSCDFSGTAMLSQSPPVEASGCVYSSS 109

[Close]
BLAST of Cucsat.G4325 vs. TAIR 10
Match: AT2G03505.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 145.6 bits (366), Expect = 2.9e-35
Identity = 67/108 (62.04%), Postives = 85/108 (78.70%), Query Frame = 0 

Query: 4   LLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQPNTV 63
           LLL  L  LA T++SSATYC+C+DG+ ++ LQ S+DYACG   DC PI + GPCYQPNT+
Sbjct: 3   LLLSLLFLLALTTYSSATYCLCRDGVGEKDLQTSIDYACGVLKDCNPIHEKGPCYQPNTI 62

Query: 64  KDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQS-PPAVASGCVYPSSP 111
           K HC +AVN+YFQR GQ+ GSC+FSGTA+ SQ+ P  V +GC+YPSSP
Sbjct: 63  KSHCDWAVNTYFQRFGQISGSCNFSGTATTSQNLPSTVVTGCLYPSSP 110

[Close]
BLAST of Cucsat.G4325 vs. TAIR 10
Match: AT1G18650.1 (plasmodesmata callose-binding protein 3 )

HSP 1 Score: 139.4 bits (350), Expect = 2.1e-33
Identity = 68/109 (62.39%), Postives = 85/109 (77.98%), Query Frame = 0 

Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60
           MAV +L  +I LA   HSS T+C+CK+GLS+  LQK+LDYACGAGADC PI Q GPC+ P
Sbjct: 1   MAVFVL-VMILLAMAGHSSGTWCVCKEGLSEAMLQKTLDYACGAGADCGPIHQTGPCFNP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSS 110
           NTVK HCSYAVNS+FQ+KGQ  G+CDF+GTA+ S S P+  + C +P+S
Sbjct: 61  NTVKSHCSYAVNSFFQKKGQSLGTCDFAGTATFSASDPSYTT-CPFPAS 107

[Close]
BLAST of Cucsat.G4325 vs. TAIR 10
Match: AT1G13830.1 (Carbohydrate-binding X8 domain superfamily protein )

HSP 1 Score: 137.5 bits (345), Expect = 7.8e-33
Identity = 64/108 (59.26%), Postives = 82/108 (75.93%), Query Frame = 0 

Query: 4   LLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQPNTV 63
           +LL  L+ L+ T+ SSA YC+CKDG+ D  LQ S+DYACG  ADC PI   G CYQP+T+
Sbjct: 3   VLLGLLLLLSLTNSSSAIYCLCKDGIGDTELQTSIDYACGTLADCNPIHDKGTCYQPDTI 62

Query: 64  KDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPA-VASGCVYPSSP 111
           K HC +AVNSYFQ   QV GSC+FSGTA+ + +PP+ +A+GC+YPSSP
Sbjct: 63  KSHCDWAVNSYFQNAAQVPGSCNFSGTATTNPNPPSNLANGCIYPSSP 110

[Close]
BLAST of Cucsat.G4325 vs. TAIR 10
Match: AT1G69295.1 (plasmodesmata callose-binding protein 4 )

HSP 1 Score: 125.2 bits (313), Expect = 4.0e-29
Identity = 63/109 (57.80%), Postives = 80/109 (73.39%), Query Frame = 0 

Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60
           M+VLL   LI   FT +S+A YC+CK+G ++Q LQK++DYACG GADCT I   G CYQP
Sbjct: 1   MSVLLPLCLIISMFT-YSNAAYCLCKEG-NEQVLQKAIDYACGNGADCTQIQPTGACYQP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSS 110
           NTVK+HC  AVNSY+Q+K     +CDF+G ASPS +PP+ AS C+  SS
Sbjct: 61  NTVKNHCDVAVNSYYQKKASSGATCDFNGAASPSTTPPSTASNCLTGSS 107

[Close]
BLAST of Cucsat.G4325 vs. TAIR 10
Match: AT5G61130.1 (plasmodesmata callose-binding protein 1 )

HSP 1 Score: 124.4 bits (311), Expect = 6.8e-29
Identity = 59/109 (54.13%), Postives = 79/109 (72.48%), Query Frame = 0 

Query: 1   MAVLLLCYLIFLAFTSHSSATYCICKDGLSDQALQKSLDYACGAGADCTPILQNGPCYQP 60
           MA L+L  L+ L+   HSSA++C+CK GLSD  LQ +LDYACG GADC P      C+ P
Sbjct: 1   MAALVLS-LLLLSLAGHSSASWCVCKTGLSDTVLQATLDYACGNGADCNPTKPKQSCFNP 60

Query: 61  NTVKDHCSYAVNSYFQRKGQVQGSCDFSGTASPSQSPPAVASGCVYPSS 110
           + V+ HC+YAVNS+FQ+KGQ  GSC+F GTA+P+ S P+  +GC +P+S
Sbjct: 61  DNVRSHCNYAVNSFFQKKGQSPGSCNFDGTATPTNSDPSY-TGCAFPTS 107

The following BLAST results are available for this feature:
BLAST of Cucsat.G4325 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FZ862.9e-3262.39PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana OX=3702 GN=PDCB3... [more]
Q93V725.6e-2857.80PLASMODESMATA CALLOSE-BINDING PROTEIN 4 OS=Arabidopsis thaliana OX=3702 GN=PDCB4... [more]
Q9FNQ29.6e-2854.13PLASMODESMATA CALLOSE-BINDING PROTEIN 1 OS=Arabidopsis thaliana OX=3702 GN=PDCB1... [more]
Q9SD841.6e-2753.33PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2... [more]
Q9FZD01.9e-2351.38Carbohydrate-binding X8 domain-containing protein OS=Arabidopsis thaliana OX=370... [more]
BLAST of Cucsat.G4325 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004144176.13.71e-7398.21PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus] >XP_031742380.1 PLASMO... [more]
KAG6598636.15.09e-7288.71PLASMODESMATA CALLOSE-BINDING PROTEIN 3, partial [Cucurbita argyrosperma subsp. ... [more]
XP_038886488.11.26e-7095.54PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Benincasa hispida][more]
XP_008445454.15.82e-7094.64PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Cucumis melo] >KAA00647... [more]
XP_022131475.16.41e-6790.00PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Momordica charantia][more]
BLAST of Cucsat.G4325 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KDN81.80e-7398.21X8 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G366460 PE=4 SV=... [more]
A0A5A7V8S92.82e-7094.64PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo var. makuwa OX=1194... [more]
A0A1S3BDH02.82e-7094.64PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucumis melo OX=3656 GN=LOC10348... [more]
A0A6J1BPT83.10e-6790.00PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Momordica charantia OX=3673 GN=L... [more]
A0A6J1HDW51.14e-6389.91PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like OS=Cucurbita moschata OX=3662 GN=LO... [more]
BLAST of Cucsat.G4325 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G03505.12.9e-3562.04Carbohydrate-binding X8 domain superfamily protein [more]
AT1G18650.12.1e-3362.39plasmodesmata callose-binding protein 3 [more]
AT1G13830.17.8e-3359.26Carbohydrate-binding X8 domain superfamily protein [more]
AT1G69295.14.0e-2957.80plasmodesmata callose-binding protein 4 [more]
AT5G61130.16.8e-2954.13plasmodesmata callose-binding protein 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012946X8 domainSMARTSM00768X8_clscoord: 21..104
e-value: 1.4E-37
score: 140.9
IPR012946X8 domainPFAMPF07983X8coord: 22..92
e-value: 1.3E-21
score: 77.0
NoneNo IPR availableGENE3D1.20.58.1040coord: 15..99
e-value: 8.9E-10
score: 40.8
NoneNo IPR availablePANTHERPTHR31044:SF95PLASMODESMATA CALLOSE-BINDING PROTEIN 3-LIKE ISOFORM X1coord: 1..99
IPR044788Carbohydrate-binding X8 domain-containing protein, plantPANTHERPTHR31044BETA-1,3 GLUCANASEcoord: 1..99

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G4325.T1Cucsat.G4325.T1mRNA
Cucsat.G4325.T2Cucsat.G4325.T2mRNA
Cucsat.G4325.T5Cucsat.G4325.T5mRNA
Cucsat.G4325.T3Cucsat.G4325.T3mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
cellular_component GO:0009506 plasmodesma