Cucsat.G431 (gene) Cucumber (B10) v3

Overview
NameCucsat.G431
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionSerine incorporator
Locationctg1: 8875514 .. 8877038 (-)
RNA-Seq ExpressionCucsat.G431
SyntenyCucsat.G431
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAGATGAAGCAGAGGTATGTTTTCTAATGAAGTGTAGCAGCAATCCAAAAACCTTAAATTTATCTATAACAGTATCAACTTACTTTTAGCATCAAATTCCACATAAATGTCTCAACAGCTGCTCCCTCGGATTATTCACGTCGACAATTTTTTATATAGCTTCCTTCTGTGGAATTGGCTTAATGTACTCCTTATACGTTCCAAAACTGAGATGTGTTCTCAATATATTCTTCATCTCTTGGACTTTGATTTTGCTCATTGTGATGATGGCTGTATCTTTACATTCAAAGGTATGCTCCTCAAAATCGCCCTTTTTTCGTTCATAACTACAAAGCTTTTTCATATTCAGCAAGAATATCGCAGTTGTCAGCAGTTTCTATTTCAAAAGAAAGATTTAACTTACTGGTTAAGAATTTTCTTTGGAACTATAAAAGTCAGGTTAATAGAGGTCTGTTGTCATCCGGTATCATGGCTTCGTACGTTGTCTTCCTCTGCTGGTCTGCCATTAGAAGGTTGAAGAATTAACACTGTGTTTTGATATTGGCTTGCTATTTTGAAGTTGAATGGTGAATCTGAAACTGGTTTTGAATGAAACTATGATCTTACTAATTCTAGTGAATGGCTTCTCAGTGAACCTACGACCGAAAAATGCAGTGCACGGAAGGAAGAGAGTGGGAACAGTGACTGGATTACAATACTTGTGAGAATTTACAGCTTCTTCTTGAACTTTGTGGTTTCCTTTGATCATACATTGAGGAGCACACTGCTCTTTCATCTAGTTTGTGCTTTTGAAGTTCCAAAGTGTGCATAAGTTGGTCTAGACATTACAATTATTTTATGTACTGAACGCCTTATTCTTTGTTACGGAAGTCATCATACAAGACGAGCTCGAAAATGTTGATGATCAAGCAATTTAATTTTCTTTGCCAGAAAATCCTGTCTCTCTAACTGATATTTTCCTTTGTTGTGTTTGTAGAGTTTCTTAATTGCAATATGTGCTGTTGTCATGGCAACCTTCTCAACTGGTATTGATTCACAATCATTTCAGGTTACTTTCTTTTGACTTTTCATCTTCAAATGTTCATCTAAACTTCAGCTAATATTTCAAAAGTATTTTCTGAACTACCAAACAAAGAAACTATCTGAACAATCACATTGTTTAAAAACAGAAAATATTTAAAGTCACCAAAAGTTTTTACACATCTCAACGTCTTCATTTTCCATCTTTATGGATTTTTTTTATGACAACTGAATACTGAAGTATGTTTCCGATGCTGAGCAGTTCCGAAAAGATGAAGTGAAAGAGGAAGATGATATTCCTTACAAGTATGGTTTTTTCCATCTCACATTCTCTCTCGGGGCCATGTACTTTGCTATGCTCTTCATCAGCTGGAACCTCAACAACTCAGCCACAAAGTAAGAAAACGCTGTTGTATCTAAAACTCACATCTCTTTCTAATACTCAGTTTGATTAGGCTGGTCTGTGAGACTCTTAGCACAAGATTGCATTTCCATTGTAAAGTTGGCCAATTAGTTCGAATTATCTCACTCCCGACTTATGTGATCCTCATAGTGTTTCAAGTTTGAAGCTCTTATACAGTTGTGAAATGTTTAGGTGGAGTATGGATGTTGGATGGACAAGTACTTGGGTTAAAATCATCAATGAATGGTTTGCAGCCACAATATACTGTAAGTACAATCATACTCAATAACCATTCCCATTCCATTTTTAAAAATTATGCTTATAAATGATACTTATGCTTGTAAGTTTTTATAGGTTTCGTTATTTACATTTTACAGATCCATCAAAATACAAACCAAGTTTGAAAAGGAAAACGGTTTTCAAAACCTTTGTGTTTTTAACATATAGCACATAGATTGTAAACGATTTTAAAAATTAGAAGCTACAAACGAAATCACTATCGAATGAGATTTTAGTATAACAAATTTGCAACAACTCTCACCATTCACCAACGTGCGAATAAGATTTTCATTCTAGAAACCAAGACACTTTGATAACCCCTGAGAAATAACATTCAAAAGTATACAAAACACGTTTTCTACATATGGCATTTAACAATTAATCTTACGAGACAACATAACCATAACTCAGTTTGAATTGTACAGTGTGGACGTTAATGTCTCCAGTGGTGAGAAAGGCAAAGGTGAGAGATTATGAGGAAGGAGCTGTAGTGCAAGAGGCAAATGATTCAGCAGATTCAGCAGATTCAGCAATTCCTTGACATTGAATTTTGGAATATTTTCTTTTCTTTTCTTTTTCTGTACTCTCATTTATCTTTGTCCATCCATTTTTTTATTTTGATTATATTACTGTTGTTGTCATTCTTTTAAAATGATAAATGAAAAGTTTCAC

Coding sequence (CDS)

ATGTACTCCTTATACGTTCCAAAACTGAGATGTGTTCTCAATATATTCTTCATCTCTTGGACTTTGATTTTGCTCATTGTGATGATGGCTGTATCTTTACATTCAAAGGTTAATAGAGGTCTGTTGTCATCCGGTATCATGGCTTCGTACGTTGTCTTCCTCTGCTGGTCTGCCATTAGAAGTGAACCTACGACCGAAAAATGCAGTGCACGGAAGGAAGAGAGTGGGAACAGTGACTGGATTACAATACTTAGTTTCTTAATTGCAATATGTGCTGTTGTCATGGCAACCTTCTCAACTGGTATTGATTCACAATCATTTCAGTTCCGAAAAGATGAAGTGAAAGAGGAAGATGATATTCCTTACAAGTATGGTTTTTTCCATCTCACATTCTCTCTCGGGGCCATGTACTTTGCTATGCTCTTCATCAGCTGGAACCTCAACAACTCAGCCACAAAGTGGAGTATGGATGTTGGATGGACAAGTACTTGGGTTAAAATCATCAATGAATGGTTTGCAGCCACAATATACTTGTGGACGTTAATGTCTCCAGTGGTGAGAAAGGCAAAGGTGAGAGATTATGAGGAAGGAGCTGTAGTGCAAGAGGCAAATGATTCAGCAGATTCAGCAGATTCAGCAATTCCTTGA

Protein sequence

MYSLYVPKLRCVLNIFFISWTLILLIVMMAVSLHSKVNRGLLSSGIMASYVVFLCWSAIRSEPTTEKCSARKEESGNSDWITILSFLIAICAVVMATFSTGIDSQSFQFRKDEVKEEDDIPYKYGFFHLTFSLGAMYFAMLFISWNLNNSATKWSMDVGWTSTWVKIINEWFAATIYLWTLMSPVVRKAKVRDYEEGAVVQEANDSADSADSAIP
Homology
[Close]
BLAST of Cucsat.G431 vs. NCBI nr
Match: XP_031737843.1 (probable serine incorporator isoform X3 [Cucumis sativus])

HSP 1 Score: 223 bits (567), Expect = 3.71e-69
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0 

Query: 1   MLERRAERFFLVPLEEHFKMPAAWWKHQAEVWWGNQRMSQGGEGRGEHTRQGNSDFVSWE 60
           MLERRAE FFLVPLEEHFKMPAAWWKHQAEVWWGNQRMSQGGEGRGEHTRQGNSDFVSWE
Sbjct: 1   MLERRAESFFLVPLEEHFKMPAAWWKHQAEVWWGNQRMSQGGEGRGEHTRQGNSDFVSWE 60

Query: 61  TPNADYANEKKKSLRVRYVYSIIFLITNLIAWFLRDYGQRILPQLH 106
           TPNADYANEKKKSLRVRYVYSIIFLITNLIAWFLRDYGQRILPQLH
Sbjct: 61  TPNADYANEKKKSLRVRYVYSIIFLITNLIAWFLRDYGQRILPQLH 106

[Close]
BLAST of Cucsat.G431 vs. NCBI nr
Match: XP_004134388.2 (probable serine incorporator isoform X1 [Cucumis sativus] >KGN56781.1 hypothetical protein Csa_011520 [Cucumis sativus])

HSP 1 Score: 223 bits (567), Expect = 9.52e-69
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0 

Query: 1   MLERRAERFFLVPLEEHFKMPAAWWKHQAEVWWGNQRMSQGGEGRGEHTRQGNSDFVSWE 60
           MLERRAE FFLVPLEEHFKMPAAWWKHQAEVWWGNQRMSQGGEGRGEHTRQGNSDFVSWE
Sbjct: 1   MLERRAESFFLVPLEEHFKMPAAWWKHQAEVWWGNQRMSQGGEGRGEHTRQGNSDFVSWE 60

Query: 61  TPNADYANEKKKSLRVRYVYSIIFLITNLIAWFLRDYGQRILPQLH 106
           TPNADYANEKKKSLRVRYVYSIIFLITNLIAWFLRDYGQRILPQLH
Sbjct: 61  TPNADYANEKKKSLRVRYVYSIIFLITNLIAWFLRDYGQRILPQLH 106

[Close]
BLAST of Cucsat.G431 vs. NCBI nr
Match: XP_031737842.1 (probable serine incorporator isoform X2 [Cucumis sativus])

HSP 1 Score: 187 bits (475), Expect = 3.37e-55
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0 

Query: 20  MPAAWWKHQAEVWWGNQRMSQGGEGRGEHTRQGNSDFVSWETPNADYANEKKKSLRVRYV 79
           MPAAWWKHQAEVWWGNQRMSQGGEGRGEHTRQGNSDFVSWETPNADYANEKKKSLRVRYV
Sbjct: 1   MPAAWWKHQAEVWWGNQRMSQGGEGRGEHTRQGNSDFVSWETPNADYANEKKKSLRVRYV 60

Query: 80  YSIIFLITNLIAWFLRDYGQRILPQLH 106
           YSIIFLITNLIAWFLRDYGQRILPQLH
Sbjct: 61  YSIIFLITNLIAWFLRDYGQRILPQLH 87

[Close]
BLAST of Cucsat.G431 vs. NCBI nr
Match: XP_016899026.1 (PREDICTED: probable serine incorporator isoform X5 [Cucumis melo])

HSP 1 Score: 140 bits (353), Expect = 2.47e-37
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0 

Query: 37  RMSQGGEGRGEHTRQGNSDFVSWETPNADYANEKKKSLRVRYVYSIIFLITNLIAWFLRD 96
           RMSQGGEGRGEHTRQGNS+FVSWE PNADYANEKKKSLRVRYVYSIIFL+TNLIAWFLRD
Sbjct: 43  RMSQGGEGRGEHTRQGNSEFVSWEIPNADYANEKKKSLRVRYVYSIIFLVTNLIAWFLRD 102

Query: 97  YGQRILPQLH 106
           YGQRI+PQLH
Sbjct: 103 YGQRIVPQLH 112

[Close]
BLAST of Cucsat.G431 vs. NCBI nr
Match: XP_008438416.1 (PREDICTED: probable serine incorporator isoform X4 [Cucumis melo])

HSP 1 Score: 140 bits (353), Expect = 2.87e-37
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0 

Query: 37  RMSQGGEGRGEHTRQGNSDFVSWETPNADYANEKKKSLRVRYVYSIIFLITNLIAWFLRD 96
           RMSQGGEGRGEHTRQGNS+FVSWE PNADYANEKKKSLRVRYVYSIIFL+TNLIAWFLRD
Sbjct: 43  RMSQGGEGRGEHTRQGNSEFVSWEIPNADYANEKKKSLRVRYVYSIIFLVTNLIAWFLRD 102

Query: 97  YGQRILPQLH 106
           YGQRI+PQLH
Sbjct: 103 YGQRIVPQLH 112

[Close]
BLAST of Cucsat.G431 vs. ExPASy TrEMBL
Match: A0A0A0L9J6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133320 PE=3 SV=1)

HSP 1 Score: 223 bits (567), Expect = 4.61e-69
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0 

Query: 1   MLERRAERFFLVPLEEHFKMPAAWWKHQAEVWWGNQRMSQGGEGRGEHTRQGNSDFVSWE 60
           MLERRAE FFLVPLEEHFKMPAAWWKHQAEVWWGNQRMSQGGEGRGEHTRQGNSDFVSWE
Sbjct: 1   MLERRAESFFLVPLEEHFKMPAAWWKHQAEVWWGNQRMSQGGEGRGEHTRQGNSDFVSWE 60

Query: 61  TPNADYANEKKKSLRVRYVYSIIFLITNLIAWFLRDYGQRILPQLH 106
           TPNADYANEKKKSLRVRYVYSIIFLITNLIAWFLRDYGQRILPQLH
Sbjct: 61  TPNADYANEKKKSLRVRYVYSIIFLITNLIAWFLRDYGQRILPQLH 106

[Close]
BLAST of Cucsat.G431 vs. ExPASy TrEMBL
Match: A0A1S4DSQ8 (probable serine incorporator isoform X5 OS=Cucumis melo OX=3656 GN=LOC103483517 PE=3 SV=1)

HSP 1 Score: 140 bits (353), Expect = 1.20e-37
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0 

Query: 37  RMSQGGEGRGEHTRQGNSDFVSWETPNADYANEKKKSLRVRYVYSIIFLITNLIAWFLRD 96
           RMSQGGEGRGEHTRQGNS+FVSWE PNADYANEKKKSLRVRYVYSIIFL+TNLIAWFLRD
Sbjct: 43  RMSQGGEGRGEHTRQGNSEFVSWEIPNADYANEKKKSLRVRYVYSIIFLVTNLIAWFLRD 102

Query: 97  YGQRILPQLH 106
           YGQRI+PQLH
Sbjct: 103 YGQRIVPQLH 112

[Close]
BLAST of Cucsat.G431 vs. ExPASy TrEMBL
Match: A0A1S3AWA9 (probable serine incorporator isoform X4 OS=Cucumis melo OX=3656 GN=LOC103483517 PE=3 SV=1)

HSP 1 Score: 140 bits (353), Expect = 1.39e-37
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0 

Query: 37  RMSQGGEGRGEHTRQGNSDFVSWETPNADYANEKKKSLRVRYVYSIIFLITNLIAWFLRD 96
           RMSQGGEGRGEHTRQGNS+FVSWE PNADYANEKKKSLRVRYVYSIIFL+TNLIAWFLRD
Sbjct: 43  RMSQGGEGRGEHTRQGNSEFVSWEIPNADYANEKKKSLRVRYVYSIIFLVTNLIAWFLRD 102

Query: 97  YGQRILPQLH 106
           YGQRI+PQLH
Sbjct: 103 YGQRIVPQLH 112

[Close]
BLAST of Cucsat.G431 vs. ExPASy TrEMBL
Match: A0A1S3AWY1 (probable serine incorporator isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483517 PE=3 SV=1)

HSP 1 Score: 140 bits (353), Expect = 2.25e-37
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0 

Query: 37  RMSQGGEGRGEHTRQGNSDFVSWETPNADYANEKKKSLRVRYVYSIIFLITNLIAWFLRD 96
           RMSQGGEGRGEHTRQGNS+FVSWE PNADYANEKKKSLRVRYVYSIIFL+TNLIAWFLRD
Sbjct: 43  RMSQGGEGRGEHTRQGNSEFVSWEIPNADYANEKKKSLRVRYVYSIIFLVTNLIAWFLRD 102

Query: 97  YGQRILPQLH 106
           YGQRI+PQLH
Sbjct: 103 YGQRIVPQLH 112

[Close]
BLAST of Cucsat.G431 vs. ExPASy TrEMBL
Match: A0A1S3AWY5 (probable serine incorporator isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483517 PE=3 SV=1)

HSP 1 Score: 140 bits (353), Expect = 3.19e-37
Identity = 66/70 (94.29%), Postives = 69/70 (98.57%), Query Frame = 0 

Query: 37  RMSQGGEGRGEHTRQGNSDFVSWETPNADYANEKKKSLRVRYVYSIIFLITNLIAWFLRD 96
           RMSQGGEGRGEHTRQGNS+FVSWE PNADYANEKKKSLRVRYVYSIIFL+TNLIAWFLRD
Sbjct: 43  RMSQGGEGRGEHTRQGNSEFVSWEIPNADYANEKKKSLRVRYVYSIIFLVTNLIAWFLRD 102

Query: 97  YGQRILPQLH 106
           YGQRI+PQLH
Sbjct: 103 YGQRIVPQLH 112

[Close]
BLAST of Cucsat.G431 vs. TAIR 10
Match: AT2G33205.1 (Serinc-domain containing serine and sphingolipid biosynthesis protein )

HSP 1 Score: 53.9 bits (128), Expect = 9.0e-08
Identity = 25/40 (62.50%), Postives = 27/40 (67.50%), Query Frame = 0 

Query: 66  YANEKKKSLRVRYVYSIIFLITNLIAWFLRDYGQRILPQL 106
           Y  EK KSLR RY Y  IFLI NL AWF+RDY Q+ L  L
Sbjct: 39  YYQEKNKSLRARYTYGTIFLIINLCAWFIRDYAQKALALL 78

[Close]
BLAST of Cucsat.G431 vs. TAIR 10
Match: AT4G13345.1 (Serinc-domain containing serine and sphingolipid biosynthesis protein )

HSP 1 Score: 42.4 bits (98), Expect = 2.7e-04
Identity = 17/29 (58.62%), Postives = 23/29 (79.31%), Query Frame = 0 

Query: 77  RYVYSIIFLITNLIAWFLRDYGQRILPQL 106
           RYVY +IFL+ NL+AW LRDYG+  L ++
Sbjct: 34  RYVYGLIFLLANLLAWALRDYGRGALTEM 62

[Close]
BLAST of Cucsat.G431 vs. TAIR 10
Match: AT4G13345.2 (Serinc-domain containing serine and sphingolipid biosynthesis protein )

HSP 1 Score: 42.4 bits (98), Expect = 2.7e-04
Identity = 17/29 (58.62%), Postives = 23/29 (79.31%), Query Frame = 0 

Query: 77  RYVYSIIFLITNLIAWFLRDYGQRILPQL 106
           RYVY +IFL+ NL+AW LRDYG+  L ++
Sbjct: 34  RYVYGLIFLLANLLAWALRDYGRGALTEM 62

The following BLAST results are available for this feature:
BLAST of Cucsat.G431 vs.
Match NameE-valueIdentityDescription
BLAST of Cucsat.G431 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031737843.13.71e-6999.06probable serine incorporator isoform X3 [Cucumis sativus][more]
XP_004134388.29.52e-6999.06probable serine incorporator isoform X1 [Cucumis sativus] >KGN56781.1 hypothetic... [more]
XP_031737842.13.37e-55100.00probable serine incorporator isoform X2 [Cucumis sativus][more]
XP_016899026.12.47e-3794.29PREDICTED: probable serine incorporator isoform X5 [Cucumis melo][more]
XP_008438416.12.87e-3794.29PREDICTED: probable serine incorporator isoform X4 [Cucumis melo][more]
BLAST of Cucsat.G431 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9J64.61e-6999.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133320 PE=3 SV=1[more]
A0A1S4DSQ81.20e-3794.29probable serine incorporator isoform X5 OS=Cucumis melo OX=3656 GN=LOC103483517 ... [more]
A0A1S3AWA91.39e-3794.29probable serine incorporator isoform X4 OS=Cucumis melo OX=3656 GN=LOC103483517 ... [more]
A0A1S3AWY12.25e-3794.29probable serine incorporator isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483517 ... [more]
A0A1S3AWY53.19e-3794.29probable serine incorporator isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483517 ... [more]
BLAST of Cucsat.G431 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G33205.19.0e-0862.50Serinc-domain containing serine and sphingolipid biosynthesis protein [more]
AT4G13345.12.7e-0458.62Serinc-domain containing serine and sphingolipid biosynthesis protein [more]
AT4G13345.22.7e-0458.62Serinc-domain containing serine and sphingolipid biosynthesis protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005016Serine incorporator/TMS membrane proteinPFAMPF03348Serinccoord: 70..281
e-value: 9.6E-38
score: 130.2
IPR005016Serine incorporator/TMS membrane proteinPANTHERPTHR10383SERINE INCORPORATORcoord: 48..281
NoneNo IPR availablePANTHERPTHR10383:SF23SERINC-DOMAIN CONTAINING SERINE AND SPHINGOLIPID BIOSYNTHESIS PROTEINcoord: 48..281

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G431.T12Cucsat.G431.T12mRNA
Cucsat.G431.T11Cucsat.G431.T11mRNA
Cucsat.G431.T8Cucsat.G431.T8mRNA
Cucsat.G431.T4Cucsat.G431.T4mRNA
Cucsat.G431.T5Cucsat.G431.T5mRNA
Cucsat.G431.T6Cucsat.G431.T6mRNA
Cucsat.G431.T7Cucsat.G431.T7mRNA
Cucsat.G431.T1Cucsat.G431.T1mRNA
Cucsat.G431.T2Cucsat.G431.T2mRNA
Cucsat.G431.T3Cucsat.G431.T3mRNA
Cucsat.G431.T9Cucsat.G431.T9mRNA
Cucsat.G431.T10Cucsat.G431.T10mRNA
Cucsat.G431.T13Cucsat.G431.T13mRNA
Cucsat.G431.T14Cucsat.G431.T14mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane