Cucsat.G413 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G413
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	60S ribosomal protein L13a, putative
Location	ctg1: 8606124 .. 8609070 (-)
RNA-Seq Expression	Cucsat.G413
Synteny	Cucsat.G413

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCTGTTGCTGCTGAGACTGAGAGTAGCGGCCGAAAATGGTGTCGGGTTCTGGAATATGTGCGAAGCGGGTCGTCGTCGATGCAAGGCACCACATGCTCGGAAGGCTTTCCTCGATCATAGCCAAGGAGCTTCTCAATGGCCAGAAGGTGGTCGTCGTCCGATGTGAAGAAATTTGCATCTCTGGAGGTTTGGTTCGCCAGAAGATGAAGTACATGAGGTTCTTGAGGAAGCGTATGAATACCAAGCCTTCTCATGGCCCCATTCACTTCCGTGCTCCCGCCAAGATCCTCTGGCGAACAATCCGTGGGTAACGTCTTTCAACCCCTGTTTTTATTAGTTAGATTGACAGTAAAATGTGTTTGATTGTCTTTGAAATTGCTCGAATGTCGCTTACTACTGTTTAACCGACCCCAGCTTTATACGAAGTTGTTTAAGCGATGCACGACTCCTATAAATTTTTTTCTTAACCACCGTTTGAATTCACCGAGCTTGTTAAGTTCGTAATTAGAGAAAAACGGGTTTTTGCATTAACGTAAACCAATATGACACTGTTGCACACTTGTTAAATTGATTAATTTAAAATATTGAATTAGATAAAATCCATTGTCAAAAGAGTGGGTAGTATCTTCAGTGAAGTGCCTGAAAGTATGAGGTTCAGCTACAGTGGTATTTCCACTTCCTAAAGCGTAAAACTTGAACCCAACCCCAAAACTTGGAGTTCACTTTCATCGTAAAAGTAGCACCTACACGTTTCTGGTAAATAGTTCTAACACAGGTGTATTCAAGTTAGTATAATAATTTTGAAATCAAAACTTTGAAGACATATTTCCTTACAAGAAATAATTTGATAATTTAAATTCACCCAAAAAATGAAATAAAAGAGAAAGCTAATCGAGGTTGATTGAGTCGAACTATTTTGGTTGAAATTGAAGTTAGTTGCATTTAAACCCAAACCCAATTTAATTCTATAACTATCTTGATTCTTGACCACGTTGGCTAGTTCACAGCTTTAACTTGACCAAACTAGTTTAAACTGGTTAAGTTGATTAAGTATCTGTAGGAAGGTGGTTTAATTCAATCCCAATTTAGTGTGGGCGTAGTGTCCAGCTTAGTTTCTGACTTAGGCTTTGAATTATTTTATAAAGCATTAGTTATGATAATTTATTTGATTAATTCAACAAAATTAAGTGAAACAAGAATGTAAGCAGCCATTCGGTGTACCAACTTCTTAAGTTGATAATTGATATTAGGAAGAAAGTTTGTTCTTCACCGGTCTTCTTATAATCTAAATGGATTAGAAGAGCAGCAACACAGGTGTTCAACTTATGTTTTATGTGATTTGTAAGTGATATGTATTGACTACACTCTTTGATAGTAGAATGCAATTTCATGGGTTTCTATGTTTGGTCGGTGAACTGTTAGGCTTATGAATGGAATTGAAAATTTTCCCATATGCTTCTAGAGTTAGGGGGTTGGGTTAATCCCTTATTTTTTTCAAAATTTAATTCCACAATGTATTCACTAGATAGGTTGACAGCTTAATTGGTTGCTTCTTGTGCGGTTCTCAGGATGATCCCACACAAGACAAAGCGTGGAGCTGCTGCTCTTGCTCGTTTGAAGGCATATGAAGGTGTTCCTCCTCCCTATGATAAGATGAAGCGGATGGTCATCCCTGATGCTCTCAAGTAAGTTTGAGGACGATGTCTTCATGTTATATTTGTGGTGCCAATTGGCAATCATGAATTCTTTCTTTATACATGTAGTATATAATCTTAGTTATGAGTTCAAATTTTTGGATACAAATGTACAAAGAATCATGTAATGTCTAATTTTCTTTATTGACATATTCTCTCTATTGTAATACATTAGGGTTTTGAGGCTTCAAGCTGGACACAAATACTGCCTGTTGGGCAGACTCTCATCGGAAGTGGGATGGAACCACTATGACACTATTAAGGTATGTATTGAGGTCGATGTATTCATACCATTCTGCATGGTTTCTGTTCACAAATTCTCTCTTCCAATGCTATCAAATCAACATTTTGCTTAGTTTTTGTTCTCCCAAGTTGTCCCCACTTTATCTTGGAGAAATTGTAATATGGAATCGTTCACTCATTGTCTGTCTATGAATGGTATGGAGTTCATTACATATAATAATCTATCATCTAAGACATGTGGAATGTTGAATGGAAAGAGTAATTACTATATACTACTAAGCGGTACTAGAAAATTTCCCATTTGCACTATGGCTTTTTGTCATCTTCCATTCGCTTTCATATCGATCAAGTGAATGGATGATGATGGCTGGCTCTATGAACTTATTCTGACTTCTCCTTTTTCATTCTCTCAGGAGCTTGAAAGGAAGAGGAAAGAGAGGTCTCAAGCTGCATACGAGAAGAAGAAACAGTTGACTAAGTTGAGAGTCAAAGCCGAGAAGGTTGCAGACGAGAAGCTTGGACCCCAGTTGCAAGTAATAGCACCTATTAAATACTAGTTTGTTTACTAGACCTGTGTTGAATGAGAATGCTTTATGATTGGAGAATGGAGTTTAATTTTCATTTTGGCTTTTATTTTTTGGTATCATTTTGGTTGTGTATTGAAAATTGGTTACCATTTTTCTCCTGATTGTGAAATTAGTTAAATTTTGGGTAATCACTTATCATTCCATATAACTCTACTCTACCTTTAACAGACATAGTATCCTAAAGATTTGTTGTATTTGTTGACATCCATGTGTGTTGAATGGACATGGACAGACACCAATTCATAAAACACCATGTTTTGCATCTTCCAATTTTAAATTGATGTGGAGCTAAATCTTTATGTGGATTGTCAATTTGATAGGTAAACGAAAACTAAT

Coding sequence (CDS)

ATGATCCCACACAAGACAAAGCGTGGAGCTGCTGCTCTTGCTCGTTTGAAGGCATATGAAGGTGTTCCTCCTCCCTATGATAAGATGAAGCGGATGGTCATCCCTGATGCTCTCAAGGTTTTGAGGCTTCAAGCTGGACACAAATACTGCCTGTTGGGCAGACTCTCATCGGAAGTGGGATGGAACCACTATGACACTATTAAGGAGCTTGAAAGGAAGAGGAAAGAGAGGTCTCAAGCTGCATACGAGAAGAAGAAACAGTTGACTAAGTTGAGAGTCAAAGCCGAGAAGGTTGCAGACGAGAAGCTTGGACCCCAGTTGCAAGTAATAGCACCTATTAAATACTAG

Protein sequence

MIPHKTKRGAAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLTKLRVKAEKVADEKLGPQLQVIAPIKY

Homology

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BLAST of Cucsat.G413 vs. ExPASy Swiss-Prot
Match: Q9LRX8 (60S ribosomal protein L13a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL13AB PE=2 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 8.3e-103
Identity = 186/206 (90.29%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHM GRL+SIIAKELLNGQ VVVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK +EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERSQA YE+KKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQALYERKKQLT 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 207
           KLR KAEKVA+EKLG QL V+A IKY
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLASIKY 206

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BLAST of Cucsat.G413 vs. ExPASy Swiss-Prot
Match: Q9FKC0 (60S ribosomal protein L13a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL13AD PE=2 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 2.4e-102
Identity = 182/206 (88.35%), Postives = 195/206 (94.66%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHMLGRL+SI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK YEGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+   YE+KKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLN 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 207
           KLRVKAEKVA+EKLG QL ++AP+KY
Sbjct: 181 KLRVKAEKVAEEKLGAQLDILAPVKY 206

[Close]

BLAST of Cucsat.G413 vs. ExPASy Swiss-Prot
Match: Q9SFU1 (60S ribosomal protein L13a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL13AA PE=2 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 9.1e-102
Identity = 179/206 (86.89%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRL+S++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGA ALARLK +EGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+QA YE+KKQL+
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELENKRKERAQAVYERKKQLS 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 207
           KLR KAEKVA+EKLG QL V+AP+KY
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLAPVKY 206

[Close]

BLAST of Cucsat.G413 vs. ExPASy Swiss-Prot
Match: Q9SVR0 (60S ribosomal protein L13a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL13AC PE=2 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 3.5e-101
Identity = 180/206 (87.38%), Postives = 194/206 (94.17%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVD RHHMLGRL+S  AKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK +EG+PPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELE KRKERSQ  YE+KKQL 
Sbjct: 121 KRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVMYERKKQLN 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 207
           KLR KAEKVA+E+LG QL V+AP+KY
Sbjct: 181 KLRTKAEKVAEERLGSQLDVLAPVKY 206

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BLAST of Cucsat.G413 vs. ExPASy Swiss-Prot
Match: O49885 (60S ribosomal protein L13a OS=Lupinus luteus OX=3873 GN=RPL13A PE=2 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 2.2e-95
Identity = 172/206 (83.50%), Postives = 190/206 (92.23%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGI AKRVVVDARHHMLGRL+SI+AKELLNGQKVV+VR EEICISGGLVRQKMKY+
Sbjct: 1   MVSGSGIAAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRSEEICISGGLVRQKMKYL 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIH  AP+KI WRT+RGMIPHKTKRG  ALARLK YEG+PPP+DK 
Sbjct: 61  RFLRKRMNTKPSHGPIHC-APSKIFWRTVRGMIPHKTKRGEHALARLKVYEGIPPPFDKQ 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KR+V+PDALKVLRLQ GHKYCLLG+LSSEVGWN+YDTIKELE+KRKERSQ  YE+KKQL 
Sbjct: 121 KRLVVPDALKVLRLQKGHKYCLLGQLSSEVGWNYYDTIKELEKKRKERSQVVYERKKQLN 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 207
           KLRVKAE+VA EKLG QL ++AP+KY
Sbjct: 181 KLRVKAEQVAQEKLGSQLDILAPVKY 205

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BLAST of Cucsat.G413 vs. NCBI nr
Match: XP_004133995.1 (60S ribosomal protein L13a-2 [Cucumis sativus] >XP_008438365.1 PREDICTED: 60S ribosomal protein L13a-2-like [Cucumis melo] >KAA0049152.1 60S ribosomal protein L13a-4 [Cucumis melo var. makuwa] >KGN56740.1 hypothetical protein Csa_009815 [Cucumis sativus] >TYK17407.1 60S ribosomal protein L13a-4 [Cucumis melo var. makuwa])

HSP 1 Score: 407 bits (1046), Expect = 3.69e-143
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206
           KLRVKAEKVADEKLGPQLQVIAPIKY
Sbjct: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]

BLAST of Cucsat.G413 vs. NCBI nr
Match: XP_022147118.1 (60S ribosomal protein L13a-4-like [Momordica charantia])

HSP 1 Score: 403 bits (1035), Expect = 1.75e-141
Identity = 201/206 (97.57%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206
           KLRVKAEKVADEKLGPQL+VIAPIKY
Sbjct: 181 KLRVKAEKVADEKLGPQLEVIAPIKY 206

[Close]

BLAST of Cucsat.G413 vs. NCBI nr
Match: XP_023521847.1 (60S ribosomal protein L13a-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402 bits (1034), Expect = 2.49e-141
Identity = 203/206 (98.54%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QA YEKKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLN 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206
           KLRVKAEKVADEKLGPQLQVIAPIKY
Sbjct: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]

BLAST of Cucsat.G413 vs. NCBI nr
Match: XP_022924796.1 (60S ribosomal protein L13a-4-like isoform X1 [Cucurbita moschata] >XP_023529032.1 60S ribosomal protein L13a-4-like [Cucurbita pepo subsp. pepo] >KAG6582470.1 60S ribosomal protein L13a-4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018859.1 60S ribosomal protein L13a-4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 402 bits (1033), Expect = 3.54e-141
Identity = 200/206 (97.09%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVV+DARHHMLGRL+SI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVIDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKI+WRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206
           KLRVKAEKVADEKLGPQLQVIAPIKY
Sbjct: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]

BLAST of Cucsat.G413 vs. NCBI nr
Match: XP_008450411.1 (PREDICTED: 60S ribosomal protein L13a-4 [Cucumis melo] >XP_008457247.1 PREDICTED: 60S ribosomal protein L13a-4 [Cucumis melo] >XP_008458460.1 PREDICTED: 60S ribosomal protein L13a-4 [Cucumis melo] >XP_011649089.1 60S ribosomal protein L13a-4 [Cucumis sativus] >XP_031736175.1 60S ribosomal protein L13a-4 [Cucumis sativus] >KAA0033292.1 60S ribosomal protein L13a-4 [Cucumis melo var. makuwa] >KAA0051231.1 60S ribosomal protein L13a-4 [Cucumis melo var. makuwa] >KAE8653514.1 hypothetical protein Csa_007589 [Cucumis sativus] >KGN61467.1 hypothetical protein Csa_006236 [Cucumis sativus] >TYK14816.1 60S ribosomal protein L13a-4 [Cucumis melo var. makuwa])

HSP 1 Score: 401 bits (1030), Expect = 1.01e-140
Identity = 201/206 (97.57%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYE+KKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYERKKQLN 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206
           KLR+KAEKVA+EKLGPQL+VIAPIKY
Sbjct: 181 KLRIKAEKVAEEKLGPQLEVIAPIKY 206

[Close]

BLAST of Cucsat.G413 vs. ExPASy TrEMBL
Match: A0A5A7U034 (60S ribosomal protein L13a-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002690 PE=3 SV=1)

HSP 1 Score: 407 bits (1046), Expect = 1.78e-143
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206
           KLRVKAEKVADEKLGPQLQVIAPIKY
Sbjct: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]

BLAST of Cucsat.G413 vs. ExPASy TrEMBL
Match: A0A0A0L439 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G131930 PE=3 SV=1)

HSP 1 Score: 407 bits (1046), Expect = 1.78e-143
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206
           KLRVKAEKVADEKLGPQLQVIAPIKY
Sbjct: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]

BLAST of Cucsat.G413 vs. ExPASy TrEMBL
Match: A0A1S3AW63 (60S ribosomal protein L13a-2-like OS=Cucumis melo OX=3656 GN=LOC103483483 PE=3 SV=1)

HSP 1 Score: 407 bits (1046), Expect = 1.78e-143
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206
           KLRVKAEKVADEKLGPQLQVIAPIKY
Sbjct: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]

BLAST of Cucsat.G413 vs. ExPASy TrEMBL
Match: A0A6J1D0E7 (60S ribosomal protein L13a-4-like OS=Momordica charantia OX=3673 GN=LOC111016129 PE=3 SV=1)

HSP 1 Score: 403 bits (1035), Expect = 8.49e-142
Identity = 201/206 (97.57%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206
           KLRVKAEKVADEKLGPQL+VIAPIKY
Sbjct: 181 KLRVKAEKVADEKLGPQLEVIAPIKY 206

[Close]

BLAST of Cucsat.G413 vs. ExPASy TrEMBL
Match: A0A6J1EAG0 (60S ribosomal protein L13a-4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432187 PE=3 SV=1)

HSP 1 Score: 402 bits (1033), Expect = 1.71e-141
Identity = 200/206 (97.09%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVV+DARHHMLGRL+SI+AKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVIDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKI+WRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206
           KLRVKAEKVADEKLGPQLQVIAPIKY
Sbjct: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]

BLAST of Cucsat.G413 vs. TAIR 10
Match: AT3G24830.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 374.4 bits (960), Expect = 5.9e-104
Identity = 186/206 (90.29%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHM GRL+SIIAKELLNGQ VVVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK +EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERSQA YE+KKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQALYERKKQLT 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 207
           KLR KAEKVA+EKLG QL V+A IKY
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLASIKY 206

[Close]

BLAST of Cucsat.G413 vs. TAIR 10
Match: AT5G48760.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 372.9 bits (956), Expect = 1.7e-103
Identity = 182/206 (88.35%), Postives = 195/206 (94.66%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHMLGRL+SI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK YEGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+   YE+KKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLN 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 207
           KLRVKAEKVA+EKLG QL ++AP+KY
Sbjct: 181 KLRVKAEKVAEEKLGAQLDILAPVKY 206

[Close]

BLAST of Cucsat.G413 vs. TAIR 10
Match: AT5G48760.2 (Ribosomal protein L13 family protein )

HSP 1 Score: 372.9 bits (956), Expect = 1.7e-103
Identity = 182/206 (88.35%), Postives = 195/206 (94.66%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHMLGRL+SI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK YEGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+   YE+KKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLN 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 207
           KLRVKAEKVA+EKLG QL ++AP+KY
Sbjct: 181 KLRVKAEKVAEEKLGAQLDILAPVKY 206

[Close]

BLAST of Cucsat.G413 vs. TAIR 10
Match: AT3G07110.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 370.9 bits (951), Expect = 6.5e-103
Identity = 179/206 (86.89%), Postives = 196/206 (95.15%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRL+S++AK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGA ALARLK +EGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+QA YE+KKQL+
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELENKRKERAQAVYERKKQLS 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 207
           KLR KAEKVA+EKLG QL V+AP+KY
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLAPVKY 206

[Close]

BLAST of Cucsat.G413 vs. TAIR 10
Match: AT4G13170.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 369.0 bits (946), Expect = 2.5e-102
Identity = 180/206 (87.38%), Postives = 194/206 (94.17%), Query Frame = 0


Query: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVD RHHMLGRL+S  AKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK +EG+PPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180
           KRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELE KRKERSQ  YE+KKQL 
Sbjct: 121 KRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVMYERKKQLN 180

Query: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 207
           KLR KAEKVA+E+LG QL V+AP+KY
Sbjct: 181 KLRTKAEKVAEERLGSQLDVLAPVKY 206

The following BLAST results are available for this feature:

BLAST of Cucsat.G413 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LRX8	8.3e-103	90.29	60S ribosomal protein L13a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL13AB PE=2 SV=...	[more]
Q9FKC0	2.4e-102	88.35	60S ribosomal protein L13a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL13AD PE=2 SV=...	[more]
Q9SFU1	9.1e-102	86.89	60S ribosomal protein L13a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL13AA PE=2 SV=...	[more]
Q9SVR0	3.5e-101	87.38	60S ribosomal protein L13a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL13AC PE=2 SV=...	[more]
O49885	2.2e-95	83.50	60S ribosomal protein L13a OS=Lupinus luteus OX=3873 GN=RPL13A PE=2 SV=1	[more]

BLAST of Cucsat.G413 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004133995.1	3.69e-143	100.00	60S ribosomal protein L13a-2 [Cucumis sativus] >XP_008438365.1 PREDICTED: 60S ri...	[more]
XP_022147118.1	1.75e-141	97.57	60S ribosomal protein L13a-4-like [Momordica charantia]	[more]
XP_023521847.1	2.49e-141	98.54	60S ribosomal protein L13a-4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022924796.1	3.54e-141	97.09	60S ribosomal protein L13a-4-like isoform X1 [Cucurbita moschata] >XP_023529032....	[more]
XP_008450411.1	1.01e-140	97.57	PREDICTED: 60S ribosomal protein L13a-4 [Cucumis melo] >XP_008457247.1 PREDICTED...	[more]

BLAST of Cucsat.G413 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U034	1.78e-143	100.00	60S ribosomal protein L13a-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0L439	1.78e-143	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G131930 PE=3 SV=1	[more]
A0A1S3AW63	1.78e-143	100.00	60S ribosomal protein L13a-2-like OS=Cucumis melo OX=3656 GN=LOC103483483 PE=3 S...	[more]
A0A6J1D0E7	8.49e-142	97.57	60S ribosomal protein L13a-4-like OS=Momordica charantia OX=3673 GN=LOC111016129...	[more]
A0A6J1EAG0	1.71e-141	97.09	60S ribosomal protein L13a-4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Cucsat.G413 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24830.1	5.9e-104	90.29	Ribosomal protein L13 family protein	[more]
AT5G48760.1	1.7e-103	88.35	Ribosomal protein L13 family protein	[more]
AT5G48760.2	1.7e-103	88.35	Ribosomal protein L13 family protein	[more]
AT3G07110.1	6.5e-103	86.89	Ribosomal protein L13 family protein	[more]
AT4G13170.1	2.5e-102	87.38	Ribosomal protein L13 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005755	Ribosomal protein L13, eukaryotic/archaeal	TIGRFAM	TIGR01077	TIGR01077	coord: 12..153 e-value: 4.7E-53 score: 177.3
IPR005822	Ribosomal protein L13	PFAM	PF00572	Ribosomal_L13	coord: 10..115 e-value: 1.7E-26 score: 92.7
IPR005822	Ribosomal protein L13	PANTHER	PTHR11545	RIBOSOMAL PROTEIN L13	coord: 1..160
IPR005822	Ribosomal protein L13	HAMAP	MF_01366	Ribosomal_L13	coord: 11..135 score: 19.066811
IPR005822	Ribosomal protein L13	CDD	cd00392	Ribosomal_L13	coord: 12..113 e-value: 1.45079E-41 score: 134.169
IPR036899	Ribosomal protein L13 superfamily	GENE3D	3.90.1180.10	Ribosomal protein L13	coord: 8..154 e-value: 4.3E-61 score: 207.2
IPR036899	Ribosomal protein L13 superfamily	SUPERFAMILY	52161	Ribosomal protein L13	coord: 12..154
None	No IPR available	PANTHER	PTHR11545:SF18	60S RIBOSOMAL PROTEIN L13A-4	coord: 1..160
IPR023563	Ribosomal protein L13, conserved site	PROSITE	PS00783	RIBOSOMAL_L13	coord: 89..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G413.T2	Cucsat.G413.T2	mRNA
Cucsat.G413.T1	Cucsat.G413.T1	mRNA
Cucsat.G413.T3	Cucsat.G413.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0017148	negative regulation of translation
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome