Cucsat.G4080 (gene) Cucumber (B10) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCCAAGTTGATATCGTTACATGCAGTTGAAGAATTTTAAAATCACGGACCAATTATCTTCCGCTCGTTAATGGGTGACCCAATCTTTCAATGGTGTTCTTCTTCATCTTCAATTCCGTCACTGTTAACGTGTTAAGCCAATTTGTTTATTGCCTTCTCCATCGTTCTCTTAATTGGGTGTGGAACAAATCAACAAAGAATATTATTGTTAATTTAGAACAAATTAATATTGCAAAAATCAGAGTCCCACAAAACTCGTAGATCTGCTCGTTTTTCGCTTCCTTACCTTTCGAATCTCCATTTTTTCGTATTCGTTGAGCTTTCAAAGCTTCCTCCAAGGTAAGAGACTCGTTCCCTTTTTTTTGCTTTTTCCTCATGATTCGTTTCTTTCCCCTTTTCCAATGTTGATTTTTTTTATGTTGGGTTTAATTAGATTTGTAAATCCTGCCTTTATCTGAGGATGAATTTCACTTTCTTAGCTTTTCTGGATGTTTTTCCGTTTCTTCTCTTGTTTGTATTGTTTTTCAATTAAGGGATGCTATTTTGTTTCCTGTGATTGTTGATTTGTGGGTTGTGTTAGTTTTTGGATCTAATTACTAAAAAAACGTTTTTGTGTAGAACCCTAACGATAGTTTGATTAATAGGGGAGAATGGTGTTTGTTGCTATGTTTTGATTAAATGAACTAGGCCTTGGAAAGTGTTCATCGCATGCAATTTGGTGGAAACCCCTTGCCCTTGAAGGTTTTTGCTTCCAGGATCCCGAACATTCAATGTATTGGGGATCTTTTTATAACATAATTTTTTTAGGGATAATCAATATGCATATTTTTTGTGAATGTTATGCAAAATGTGCAAGAAGTTGAATAACTTGTATGGATTGGGTTATATGCAGATAGTGAAGCTTTTAATTCTCAATGGACGGGATAGGAGGTGAAGCTGCCTCAGCGGCAGGACCTTTGAGCCAGTGGCAGCATGATGTTTCAAGGCTTTATCAATATTATCTGGATAAGATTACTCCACATGCTGTCTACAGATGGATTGGAACCCTTTTTATAGTGGCAATTTATGCTTTGAGGGTCTTCTATGTGCAAGGGTTCTACATTGTTTCTTATGGTCTGGGTATTTATATACTCAATTTATTGATTGGATTCTTATCCCCCTTGGTTGACCCAGAGATGGAAGTTTCAGATGGGCCTTTGCTGCCTACTAAAGGTTCAGATGAATTCAGGCCATTCATTCGCCGACTTCCAGAATTTAAGTTCTGGTAACTATGGAATTTCATTCGTGAGCTTTTACATCGTTTGCCTTTTTATATTTGGTTGGTAAACTTTGAAGTTTGCATTTTCTGTTGTTTCTCAATTACAAATCTGATTCAGTACCCTGTTTGTCTATTATGTCTAATTCTGGTACTGAAAACTTGTCTAAGCTTGGTTGGCTTTGGAGGGGAAAATGGTAGGCAGCGGTGAGAGAGGGAACTTATATTGAGGTGTGCATAATTGGGTTATGTTATTTTGTGCAAAATCCTTTGTGCATCAAGTAACTTGTTTCTTTTTGTCTTGTTCATTGTGATCGCTACTCTTTCCTGTAAAAAAAAGACGTGACCGCTACTCTTTGGTGCTTCATGATGGGCTTTGCTCGTTATGCATATAGCAACATTGAGATCCTGAATCCACATGGTCAGCCTTTTTTCCATATGCGACCAGTGAATTTACATAGTTGTTGATATCTCAATAATTAGGATAATATGTAATGGAACAGGAAGAGGCAGTTTCCTGCGGCTCAGTTATTTAAGCAAGACAGGGAAAGATACAAGTGTTGTTTGGAAGAAGAATGTATATTATTGGTTTTCATTGAAATTTTGGATGGTTATAGAGGAACCTGGTCTCATTTAGTCTTACTATGTAGTGTAGGTTAATACTTTCTTTTTTCCTTTTATCCTTTTTCCCTTTTAGCTTCATTTCCTATCTTCTTTCTATGTTTATTTCTTGCTGTACAATGGTTCTAAATATTAACCTCTTTGTTAGGTAATCATCTCAAATGTGTGTGTGTGTGTGTAAAATAACCACCTATAGAATACCACCTAAGAATTGTTTTGAAAAGCCTTCAAAATCGAAGCCACAAAGAAACATGATATTTAAGAAGGGATAAAATCTTGCTAGGGACCCTCTCCACACCTCTAAATTCTATTCTTCCGCTCACTCCACACTGCCTACAAGATAGCAGACACACTCGGAAGCCATAGAAAGTGGCATTTCTCCCCATGGGGCAAGTTAAGAAGGGAATTCTTGAGCAACGCTCCAACATCTGTGTGCCTTGCAACCATAATGCAAAAAGTTTGAAACAAAGAATCACAAACCAAGCTGACTAACTCACAACGACAAAGAATGTGCTCTGCTCTTCCTCAGCCTTGACAAAGAATGCAATAGAAAGGACCCATGAAGGAAGGCAACTTCCTCTTAAGTCGATCCATCATGTTAGCCTAGCCAAGAACTCCTCAAAAGGATCAGGTTCCAGATCCTCACATCTCTTCTCCCAAGTCTAGAAGGGTGACCCTAAAGTAAAGAAAGAAGAGCAGCCACCACCACCATTTCTCACGACAGAACCTGAAAGGAAAGGAAAAGGAAAAGGAAAAGGATCTCGCAGTCTCCCTAGAAAATCATCAACAAAATTGTTTTTTGGTAGCTAACAAGAGATACGGCTGAGGGAACAAAGAACAAAGAGGCCTCTCCTCCACTCAATGGTCTTCCCAAAAATAGGTATCTTTCCCTCTCCCCCACCACACAACGAACAAAATGAATAAATGAAGGGGGCTCTTTCAAAATAATCTTCCACAAGTTTCGATGATATCCATTTAACCCCCTTAGGCAGCCAATCAAAATAGTGGGGGTCGTGTTTACTAACCCTAATTCTTAAATTCCCAACTCTCCCTCCCCAACTGGTCTCTCAATGACCTCCCATCCTCCCATCTAATCAAATGCAACCCCTTCTGTTTTCCTTCTTTTCTATTGAAAATCACACATCAACTTCTCCAAGCTTTGACAAACCTTGCACGAGCTCTAAAAAGGGAGCAAAAAATAGATAGGGGCACTCAACACCGATCTAATTAAAGTAAGGTGTACACACTGCTTTGGAAAAGAAGTCCTGTTTCCTAGAGGCTAACTGACTTTGCACATTATCCACCATCGGATCCCAAATGCCATCGAACTTGGTTTACAACCAAGGGGCAAACCAAGGTAGGAAGAAGGTAGATTACCAACCTCACCCCCACCATCTTCGCCCACAATAATCTTCTCCTCTGTCACTATTGAGGCTCATAATGCTGAACTTGTCCACCTGTTAATCCTCAACCCAAACATCTTTTCAAAGAAGCCAAATATGGTTCAAGATCAAAAACAATTCCTCCTTGCCAGAGTAGGAAAAAGCATATCATCAGTGAATTGAATATGAGAGAGGGCTACCTTATCATCCCTTACTTCAAAGGGCTCAGGGTTCTTGCCAACCACACTTTTTTGCCAAGAATTTTACAGAGAACGTCACCACTAAAAAGAACAAAAAGGGGGATAAAGGGTTTCCCTGCCTGAGACCTCTTGACCACCACTTTACTTTTAGGACTCCCATTACCGAGAAAAAAGTAACTCATATTTCTTAGACAACCGCACATCGATGTCCTCCACTTTTACCCAAAACTCTTCTTCTCCAAATCATTATCAATAAATCCCAATCCACTTAATTGTAAGCTTTTTTCATAGTCAATCTTAAAAAGCACACTTTTGTTTCTAGCTCTATAATTTTCAATCAATTCATTAGCAATAAGGACTTGATCCAGATGTCTTGCCCAGAGGCATAATGGCGTTAACGCGTTTACAAGATAATATCTATTCCTTTTTGCACCTTAAGGGAGAGGCCTTCCTCTAAGTTTCTTCTAGTTTATACCGACGAACAGAAAGATTTCCTTGATTCTCTAAACTTTCTCCCTTTCTTGCATTAATTTTTTCTTTTGGAAGACCTCTGCCATCCCCTTCAGATCATGGAAGGGTGTGGAACATGTGTTACTGCTTTTTAAAATAATTTCTTATTGTGGAATTTTGTAAACTTCAGAAATATTTATTATTTGCCTCGTGGTTGATTAATGGATACTGTTAAGACACAGTTTTACTTGTGTGTTTATGGTAGTTCTCTTCTGTTATTAGATTTTTTGAATCTTCAATTGATTACTACTTTTGCACTCTTCGGAATCGACCTTCTTGCCTGACCCCATAACACATTTCCTTTTTGGAAGTTATTAAGTGTTTGTTTATTTCTCATAGAAAATGAAAATTTGTATTTGTAGGTACTCTTTTACAAAGGCCTTTTGCATTGCCTTTGTTATGACCTTCTTCTCCATATTTGATGTTCCCGTCTTCTGGCCTATTTTACTTTGTTACTGGATTGTCCTTTTTGTCCTGACAATGAGGCGTCAGATTTCTCATATGATCAAGTACAAATACCTACCGTTTAGTTTTGGGAAGCAGGTGACCTATCAAGTACTTCTTATCCATTACACTGTTGTTAAGAGTTTGTTATTCTTGCTTTTGATAAATCTTTCGTGTTGTGGAAACATTGTTTTAAGTTTTAATATTTTGCAGAAGCATGGTGGCAAGAAACCTTCTGCAAGTAGCGTTGTCACCAGCGATGATTGATCTGTGGCTTATTATTTACAGCAATTAGTACAAGTACTGAATTGAGGGAGAAATTTAGAGACTCGAATGTTCACAGTAGCAGAAAATTTTTTCCATTAAAATTACTTGTAGTTAAGATTGCATATGGATTTAATCATTGAATTGATGATGCACAGGACATGGTTATGCCAATTCCTTTATGATTAACTGAAGGACTGCTGTTGTAGAAACTCAGTTTAATACACGTTGTAATCCTGTCCGATCGCAGAGCGTCATTTGAATTTTTTGTTTGCTTCTGATTCTCATCTTCCCACCCTTTCTTTTTCTGGCCCCTGCAGTTTTCTTGTAGAATATCCCAATCACATGTGGGTTGGAACTCTGTGTCTATTGATGATGATATTGAGAGTATTCCGTCTCCTAAGCCATTATACAAAGAGAATGCATCATAAAGAAAAGATATAACAATTTTTTGGTGAGAATTATTGGAGGTTTGGATTCTG ATGGACGGGATAGGAGGTGAAGCTGCCTCAGCGGCAGGACCTTTGAGCCAGTGGCAGCATGATGTTTCAAGGCTTTATCAATATTATCTGGATAAGATTACTCCACATGCTGTCTACAGATGGATTGGAACCCTTTTTATAGTGGCAATTTATGCTTTGAGGGTCTTCTATGTGCAAGGGTTCTACATTGTTTCTTATGGTCTGGGTATTTATATACTCAATTTATTGATTGGATTCTTATCCCCCTTGGTTGACCCAGAGATGGAAGTTTCAGATGGGCCTTTGCTGCCTACTAAAGGTTCAGATGAATTCAGGCCATTCATTCGCCGACTTCCAGAATTTAAGTTCTGGTACTCTTTTACAAAGGCCTTTTGCATTGCCTTTGTTATGACCTTCTTCTCCATATTTGATGTTCCCGTCTTCTGGCCTATTTTACTTTGTTACTGGATTGTCCTTTTTGTCCTGACAATGAGGCGTCAGATTTCTCATATGATCAAGTACAAATACCTACCGTTTAGTTTTGGGAAGCAGAAGCATGGTGGCAAGAAACCTTCTGCAAGTAGCGTTGTCACCAGCGATGATTGA MDGIGGEAASAAGPLSQWQHDVSRLYQYYLDKITPHAVYRWIGTLFIVAIYALRVFYVQGFYIVSYGLGIYILNLLIGFLSPLVDPEMEVSDGPLLPTKGSDEFRPFIRRLPEFKFWYSFTKAFCIAFVMTFFSIFDVPVFWPILLCYWIVLFVLTMRRQISHMIKYKYLPFSFGKQKHGGKKPSASSVVTSDD Homology
BLAST of Cucsat.G4080 vs. ExPASy Swiss-Prot
Match: O48670 (Protein RER1A OS=Arabidopsis thaliana OX=3702 GN=RER1A PE=1 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 6.6e-78 Identity = 143/188 (76.06%), Postives = 163/188 (86.70%), Query Frame = 0
BLAST of Cucsat.G4080 vs. ExPASy Swiss-Prot
Match: O48671 (Protein RER1B OS=Arabidopsis thaliana OX=3702 GN=RER1B PE=1 SV=2) HSP 1 Score: 285.4 bits (729), Expect = 4.7e-76 Identity = 138/188 (73.40%), Postives = 162/188 (86.17%), Query Frame = 0
BLAST of Cucsat.G4080 vs. ExPASy Swiss-Prot
Match: Q9ZWI7 (Protein RER1C OS=Arabidopsis thaliana OX=3702 GN=RER1C PE=2 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 1.7e-57 Identity = 105/178 (58.99%), Postives = 139/178 (78.09%), Query Frame = 0
BLAST of Cucsat.G4080 vs. ExPASy Swiss-Prot
Match: Q9ZPV7 (Protein RER1D OS=Arabidopsis thaliana OX=3702 GN=At2g18240 PE=2 SV=2) HSP 1 Score: 208.8 bits (530), Expect = 5.6e-53 Identity = 104/179 (58.10%), Postives = 130/179 (72.63%), Query Frame = 0
BLAST of Cucsat.G4080 vs. ExPASy Swiss-Prot
Match: P52879 (Protein RER1 homolog OS=Caenorhabditis elegans OX=6239 GN=rer-1 PE=3 SV=1) HSP 1 Score: 195.7 bits (496), Expect = 4.9e-49 Identity = 96/180 (53.33%), Postives = 126/180 (70.00%), Query Frame = 0
BLAST of Cucsat.G4080 vs. NCBI nr
Match: XP_031737203.1 (protein RER1A isoform X4 [Cucumis sativus]) HSP 1 Score: 389 bits (1000), Expect = 1.41e-136 Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
BLAST of Cucsat.G4080 vs. NCBI nr
Match: XP_004148836.1 (protein RER1A isoform X3 [Cucumis sativus] >KGN61806.1 hypothetical protein Csa_006302 [Cucumis sativus]) HSP 1 Score: 385 bits (988), Expect = 9.86e-135 Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 0
BLAST of Cucsat.G4080 vs. NCBI nr
Match: XP_031737202.1 (protein RER1A isoform X2 [Cucumis sativus]) HSP 1 Score: 384 bits (985), Expect = 3.15e-134 Identity = 193/197 (97.97%), Postives = 193/197 (97.97%), Query Frame = 0
BLAST of Cucsat.G4080 vs. NCBI nr
Match: XP_031737201.1 (protein RER1A isoform X1 [Cucumis sativus]) HSP 1 Score: 383 bits (984), Expect = 4.63e-134 Identity = 193/198 (97.47%), Postives = 193/198 (97.47%), Query Frame = 0
BLAST of Cucsat.G4080 vs. NCBI nr
Match: XP_008460950.1 (PREDICTED: protein RER1A isoform X2 [Cucumis melo]) HSP 1 Score: 383 bits (983), Expect = 5.31e-134 Identity = 191/193 (98.96%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Cucsat.G4080 vs. ExPASy TrEMBL
Match: A0A0A0LP91 (Protein RER1 OS=Cucumis sativus OX=3659 GN=Csa_2G248640 PE=3 SV=1) HSP 1 Score: 385 bits (988), Expect = 4.78e-135 Identity = 193/194 (99.48%), Postives = 193/194 (99.48%), Query Frame = 0
BLAST of Cucsat.G4080 vs. ExPASy TrEMBL
Match: A0A1S3CE35 (Protein RER1 OS=Cucumis melo OX=3656 GN=LOC103499683 PE=3 SV=1) HSP 1 Score: 383 bits (983), Expect = 2.57e-134 Identity = 191/193 (98.96%), Postives = 192/193 (99.48%), Query Frame = 0
BLAST of Cucsat.G4080 vs. ExPASy TrEMBL
Match: A0A1S3CDN0 (Protein RER1 OS=Cucumis melo OX=3656 GN=LOC103499683 PE=3 SV=1) HSP 1 Score: 378 bits (971), Expect = 1.80e-132 Identity = 191/194 (98.45%), Postives = 192/194 (98.97%), Query Frame = 0
BLAST of Cucsat.G4080 vs. ExPASy TrEMBL
Match: A0A6J1G7E1 (Protein RER1 OS=Cucurbita moschata OX=3662 GN=LOC111451535 PE=3 SV=1) HSP 1 Score: 362 bits (930), Expect = 3.33e-126 Identity = 177/194 (91.24%), Postives = 187/194 (96.39%), Query Frame = 0
BLAST of Cucsat.G4080 vs. ExPASy TrEMBL
Match: A0A6J1FS15 (Protein RER1 OS=Cucurbita moschata OX=3662 GN=LOC111448292 PE=3 SV=1) HSP 1 Score: 361 bits (926), Expect = 1.36e-125 Identity = 178/194 (91.75%), Postives = 187/194 (96.39%), Query Frame = 0
BLAST of Cucsat.G4080 vs. TAIR 10
Match: AT4G39220.1 (Rer1 family protein ) HSP 1 Score: 291.6 bits (745), Expect = 4.7e-79 Identity = 143/188 (76.06%), Postives = 163/188 (86.70%), Query Frame = 0
BLAST of Cucsat.G4080 vs. TAIR 10
Match: AT2G21600.1 (endoplasmatic reticulum retrieval protein 1B ) HSP 1 Score: 285.4 bits (729), Expect = 3.4e-77 Identity = 138/188 (73.40%), Postives = 162/188 (86.17%), Query Frame = 0
BLAST of Cucsat.G4080 vs. TAIR 10
Match: AT2G23310.1 (Rer1 family protein ) HSP 1 Score: 223.8 bits (569), Expect = 1.2e-58 Identity = 105/178 (58.99%), Postives = 139/178 (78.09%), Query Frame = 0
BLAST of Cucsat.G4080 vs. TAIR 10
Match: AT2G23310.2 (Rer1 family protein ) HSP 1 Score: 221.1 bits (562), Expect = 7.8e-58 Identity = 105/178 (58.99%), Postives = 140/178 (78.65%), Query Frame = 0
BLAST of Cucsat.G4080 vs. TAIR 10
Match: AT2G18240.1 (Rer1 family protein ) HSP 1 Score: 208.8 bits (530), Expect = 4.0e-54 Identity = 104/179 (58.10%), Postives = 130/179 (72.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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