Cucsat.G3757 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G3757
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Myb-like protein X
Location	ctg105: 406719 .. 415947 (+)
RNA-Seq Expression	Cucsat.G3757
Synteny	Cucsat.G3757

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTTCTCTCACTTGCGTGTGACCTCCAATGACCCAAAAATATATATTTATTTTTTGAAAAAAAAAAGGAGAAGAAATAAAAAAGTAGTAATCACTAGGAAGGAAGAGGAAGTTAGAGGCATTCTCAAATCGTTTTTGTTTGAGAATAGTTGGGAGAGAGAACTCAGAGACAGAGATACAACCAAAGAGAAACAAAGAAGGAAACTCAGTAGAACCAAGAGAAGAAACCCCCCAATTTCTTTTTCTTTTTCTTATTCTTTTTTCTTTTTTCTTCTTTTTTTTTTCTTTTTTTTTTTTATAATACACTCTCAAATCTCTTACACACACAACAAGAGAAGAGCAGCAAGAGATTGAAGAACACAATCTATTTAGCTACATACACCTTTTTTTTGGGTTTTCTTCCTTGTTTCCCATTTCACATGCCTTCTGTTTCTCCTTAATCTCTGTTTCAGCCACATCAACACAGAGATCTTGTCCTTCTACATTGCCTACTCTGTACCGGACAAGCTAATCTCATTACCCAATTCCCCAATCACTTTCTTTCATCCACCCACTTCCAATTTCTTCCTTTTCCCCCTAAATCCACCTGCTTTTACCCTTTTCATCCATACCCTATTATTCAAATAGGTAGTCTCTTTTCTGGGTTTTGATTCTATCTCTCTATCTATCTATTTCTTTGTTTTCACAAAAAGATTTCTTCCGATTCTCGGTTTTTTTGTTTTGTTTTTGAGGATTCAAAATTTAGGGTTTTGGTACTAGCTATGTGCTCATGTATTCGGTGGATTTTTCTAGGGTTTTGACGGATCGTTACTGGGTGGCTCTCCAATTTATCGGTTTTGCACTTATTAGGGTTTGGTACCGCCTATGATTGAAAGTATGATTTTGACTGAGACATCGCGTTTTCTCTAGAATGGGCTGGAGCTCCGATCTTTTGTGGGATTCTGGTTTTAGTTTGTACTTTGTCAAGCCTGCGATTCTGAAACTGTAACGTACCACTAGAATGAAGTGAACTTTGCTGGACTGATCATGGAAGAAGATTGCACATTATAGACTTGTTTTTGACAGTGATCAGTTTCAACCCAATCAATTTCTTGGATTACAAGGGATTTTCGATACTGTTTCTGGTGTTTCGTTTCTAATTTTGGAGTGCTGTTGGTTTAAAGAGGGGATAATAAACCCAAGAGGATAATCAAGTGACTCTAGCGTTGAGTCATTGACATTTTTCAAGAACTGATCGGGAGAGCTAATTGTGCTTAATTTGTTGTTAAATAGTTCTTTTTGTCTGCGTTTCAATTGATTTTCATATTTAGGGTTTCTCTGATATTCGGGAACTGGGATAGAATTCATATAGTTCAGTGGCAGAGTTGGCTCTTAATATCTGTTTTTCTTGAGAATTTTGGAAATATCTCTCTTGGCCTGTGCTTATTATTACTCTATTCGTGTTTTTAAGTGGGAAGAGTTCTCTGAGGTTTGGGAATTACATCTGTGGGATTGACTAAGAAGCTCATGGAGGAATATTGAAGCTGGAAATGAATGCGAGGACATGGTGCATGGACAGCAGCTTAGTTTCTTGTTCGTTCCTTTTTCGGAACAGTGCTTCTGGAAAGTAGTTATAGCATTTTCGCTTGTGGGAAGAGCTCTTGTTTTTTGTCTTACTCTGTGCAATGTCGCGCTGCTTTCCATTTCCGCCACCAGGATATGAAAAGAAGTCCAGGGCAGAGGATGCAGACCTACTAAAAAAGGTTTACAACTTACCTTGTCTTCTAATAGATATATTACTAGTGAGATATTTGATGGAGAATTATTACTGGCCCATTTGATTCTACAGGGAGCATCCTACTATAACTCCATTTGGGAGGTTTATTAGGCATGATTTCAGTCATCATAAAGGCTCACATGACTAGACTTGTTTGACATTTAGATGAAACATCTGGTCCTAGTTTCTTTAAGCACTACTGGTGTCATAAACTGTTAGATTCACTGCTGTTTCTTAAAAATGGAATATTATTCTGCATGTCCCAAGTAAAATGTACAATTCATATGTTTGTTAGATTAAAAGCAAAGGATGGTAGTTGATCATGAGATTATAGTGTATGCCACTTCCTGCTTTTGATAGATTCTGGCTTATTGGATGATTTGTAGGGCAGCTCTCTGCCAGCTATTTCTCACCTTATATTTTGTTTTGTGTGCTTGTATTTGCTCTTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGATTGTGTGTCTTGAGAATCTTAAAAATATTTCTGCCACATTCACGTAAGTGGTAGCTGTAGATTGATATAGCTTCTCACTTTGTTTGGTATTACAACAATGAAATTCTTGAACAGTTGACCATGTATTCATGATGCTTGATATAGCCTTCAATTGGCTTCGTGGAAGTTTTTTATTCTTTTCTGAAATAAAGCCTTGAAAAAAATACTCTTCTCCTTCAACATATATTTATACATTAATACATGTTATTTGTCGTCTAACATTTCAAGTATTTCAAATGGGGTGAGGGTCGTTAGACCAGATCTTTCATTGTACTGGATGGCTCACTATTGTTAGCAATTTTTGTTGCGGAGCTGTTTAAAAGGAAGAGTTTTCTTTTCAATCTCTTTCAGCTTAAGCGTGGGACATGAATTCTTCTGTGTCTTCTATGGGAAGCTTCTCCTATGAAGAGCCTGCTAAGTGCTAACTTTTTTAGTTTCTACAGAAAAAATCTTGATGATATCAAATCTTTGGATTTGATTTCTCGTCAGCCTAATTTTATCAGGTTTCTGATAATTTTTTATTTGTTGATTACTTGAATTCTTTTAGGATTTCCACTTCTTAATCTCTCTTCCAGATCTTTAACTTACATTTTCCATCTTATCTTAAGGATTTCCATTTTGTCAATACATTGTAAGGATACAGTCTCAGTAGGCTTCTTTGGTTGGTGACTTGGGAGAAGACTGTTTTCGATATGCACATAAACGAGATGCCTAAGGCTCATATGCAAAGCTAACATAGGAAAAAAATATTGTATAAGCAAAGTACAAGTTTCAAATGAGAATTCTAAGGTCCTTTCTTTTGGAAGTTAAAAACGAACCTCAAATATAGAATACAGTGTGGACTGTGGAATACAGAATATTATGTACAGCTCCATAATTGCAAATCTGACTACTTTAATCGGGCTGGATGGGCTTGTTGTCTGTGGAGAGAAGGATAAATAACTGTGAGATGAATTGAGAGTTGAGAGAGATACGGGCATGAAAGGAGAAGTAAAAGATGAAAGTATGGGCAGAGCATGGGAGGTGCGGGAGATAAAGTTGGGCCTTGGTCTTGGAGAAGCTATTGAGATGATGGGGTAAGGATGATGGCTGGGTTTTCATTTTTTTCAACCCTTAAAAATGATTTTTCTTGGGGTAGGGTAGGAGGTTGCTGACAATGGTTTGTAATTTTCTCACTTCTCAAACAAAGCTTAAATTTGACTTGATTCACTGCCTTCTTGAACAAAGCTTAAATTTGACTTGACTCACTGCCTTCTAAAACAAAGCTTAAATTTGACTTGATTTATAGACCCAATTTTCTATTAGTACGTCCACGCTAGAATCGTCTGTATTGTTTCCCTTTCTCTTGTAATTGTTCCGGCATTTCTTCTCATGTTGGAGTGTTTGTGGTTCTATAAAAATTGGAAACCTCATCTTGAGGTGTGAAACTCATGTTAGGGCTCTGTTGAAGTTTAGGACATGTGACATGACATTGACACCTACAATTTGGCTTTATGATCTGTGCTTGAAAAGAAAATCTCTATCAATTGTTGGAATTGTGATTGATGTGCGCACTTTTGGGAATGGACATGTCTTTGATGATGAACATCGGGAGGTTCTAGGTTACTACTTATGTGGAAGTTGTCACTTATGTGGAAGTTGTCTATTCATCTTGTTTTGATTTAGATCAATTAGAAAATTAGATGAATGTGCGAGGATAGAGGTGTAAGGCGTTTGTTAGATATGTGTGGTTGTCTTCACTTTGCTTGTTGCTTTTCTTTGAATTTCTTATCCCAGTACTTTTGTTTGATCTTCCTTACAAATCTTTCTTGAACATCTAGTCTTTTGGTTGCAGCCTTATATTACAATAGTGTCAGATTCTTAATTTGTTGGCTGTTTTTTGTGTTTATGTATTGTGTTTTTTGAAAAATGACAGGAGTGTTACTAATTAATTAATCTACAAAATGGTATTTGAGAAGCACGGATCTTAGTAGAAATAACATATGTTCTCGCATGGATTCTGTTCTCTTATATTGTTGGCTGCAAAGTTTCAAAGCATTCCATCTTGGTGTCATTGTTAAGATTGGTCATATTTGAATAATTAGAAAAAAGAATTTCCTACAAACTGTTTGCAGTGACCATTTTTTGTACAACAGCGTCTTATAATGGTTGATTTATTGTTACTGGAGCATCTGGATTTTGTACAATAGCTATGCTTCTCTCTGGTATTTTTGTTTAAGGATTTTGAAATTGTCTATTAATTCTTATTCTTTTGGATGGATGCCACTTTTTAGGCAGCTAGACTTGTACTTGTGTTGTCTGTAGTGGCCGTCGTGTTGACCCTCTGGTAAAAGCTTTAATTTTTCTTTTACACATTTTTCAGAACTGAATGTTTTACTGGTTTTGTGGGTTGGTTTATGGGATCTCCTTCAAATTCTTCTTGGTAGAAAAATTTGGAGTGGTAGGCACCTTTGTGGATGAAACTTGAGATTTAGGGAGACTTCAACTTCAAATTAAGCTTTTGTTCTTTAATATATCGGTTGGCTACAATTCCCACTCCTATTTCCTTGTGCTATTCAGAGGAATAAGATCCTGAAGGGTCCAAAGAAGTCACCTTCCATCTTTTTCTCCCTTAATTGTACAGTCTTGCTTAGAGTGATGCAAGCAATCAAGACCTTTCTCCCCTTATTTTTCAACTCCATAGTTTGTTGACACACCTGAAAAATTTTGTTTGTTGGCGCAACCCATAATTATCCAGAGCAAGCACGCTTTGAAAGAATAGATATGGCTTTGGCTTTGGCAGCATTTATACTCAATTGTTGCTAATTAGTAATTATAATCTAGAACAGGGCTATGTTAGGGTATCTTTTTCAGTACACATTTCCACTGTAATTAGATTGCTTAGAATCTCGAGATTAACAGAATGTTGTTTGGTTCTTTTTGTGTGTCATCTAAAGTGTAATGATGCTTAATTGGAGGCTTACGTAAAAGATTGAGACTTCTTCAGTGGCCATCTTCTCATGTCAGGCTACTAAGCAGCCAAATTTTATGACTAAGCAGCCTGTTGTTAAATCTTATTTTAAAGTAAGATCTCATCCCTTATGCTTTCTTGGTCCGCAACTATGATGAAGACATTTCTAAGATTAGCCACCTGATAGAGTGTTTGAGTACTTACAAAATGGCTGGTTTATCTGCACTAACGTCTCTCCAAGAAAAAGTACTGTCAGTTTACTTGGTGCGTTTGGACATATAACTTGAAGGGCTTCTAGCACTTCTCAAAACTTTGACATAGCGTTCCATCTTATTTGCTTAAGACCATATTTGCTAATGGATAATCCTGTGCCAGTGCTTCCATTTCATTTAAAAATCGCTATTCTCATTTTAATCTTCTTTTCCCAAGCTTCCCAAGATTCAGACCATATTTATAATGAAAGTTTTTAGGGTTAATATTGATTCAACTTCCCAAGGTTAGGTGACCTCCAATCACTCAAAAATATTCAAATGGAGAGAGAGAGAAAAAAGTAAAATAAAAACTAGTGATCACTAGGAAGGTAGTTTGAGACTTTCTCAAATCTTTCTCTATTTTTCTTCAGGAAAGTTAAGGGAACTCACAGATGGACATAGAGAAACAAAAAAGGAAACAAAGTAGAACCAGAGAATAAACCCCCAAATTTGCACACTTAGTAGACTCAAATCTTTGCACACATAAGAACAGAGAATCTAGAGCTAGAAAGAGCTTTTTACCAGTAGACGTCAATGCCTTACCATAGTCCCATATTTGGAGCCTTCACAAGTTCACATATTTTTGTTTTGCTCTTCTTGTGTTATAAGCGTCAATTTGAAACACATTCATTATGATGTGCTCCATGCTTGAGCTGGAGTTGGTTTGAATAAAATTTGTCCTTTGGGAGATTCAAAGGATTTTATTTGAAGCAACACAGATGCTTTGATGTTTTGTAAAATTGTAAGAGATGATTGAATATAGCACAAACGTCTAGTTATCTATTGTGCAGTAGTAATATCACTACTCTGCTCTGATGAGGTGGTGTGTTGACTTCTAACAATTTTCTTTTAATCTAACTTTTTTCTTTTTTAAAAAACAAATTCTTGTAGCTCCTTTTCATTTAAATTAGACATGCAGAAAGGTTTCTATTTGATCTTGTTCCAATCCCAATTTTTGTAACAGTGGTAGCTACGTTTCATCATTTCATAGGCTATCAACATATCATATAGAAATTGAAAAAAAAAAAGACATGGTTTTCTCCTCATTTTGAAATGATTTTGCTCTGATATTCCTACTTTTCTTTCTGATTGGCAGGAAAAGAGCAAAGAGAAAAAGCATAAAAAGGAGAAGAAAGAAAAGGAAAAGAGAGAGGGCAAAGAAAAAAGAGATAAGGATAAAAGTGATGAGAAACGCCGGGAAAAGAAAGACAAAAAGAAAGACAGGGACAAAAAGAAGGATAGGAATAAGGAGAAGGAGAAAGCACATGCTTCGGAGGAGAGTAAGCATTCGGGGAAAATTGGGAGTCAAAATGGAGAGGAAGTTGTTAGAGTCAAACATAACAGTGTCCAAGAGGAGAAGCATGCTGGGCAATTTGATTCTTATGTTGGAAATAAGATTAGTCAGAATGCTTTTCACTCTAAGGAGACAAAGCACACAAAAATGGTGCTGGAGGTGGGGAGGAGAATTGAGGACAGTGGAACTGCGAAGGTTGAGAAGTTTGCTGTTGCACAACCAAGAAGGGATGATGGAATGGTCACACAGGTGGGTAGGATTTCTGAGACCTTGCTTGAAACTAAGGACCAAAGCAAGAACAAGAAAATTGATGAAAGAAAATACAATGGTCAAGGACTCAGACACGAGGAAAGATTTAGTGGCAGTTCTGCAGTCCCAAGTTCAGCCCCAACTTCGACTGCAACTGCAACTGCCACTGCCACTGCCACTGCCACTGCCACTGCGACTGTTGAACCTGGAGTTCCAGGAATGTTCAAACAATTGGAGAAAAGTGCTGAGAGAAGGAAAGAATCAAATGATAAAACTAGACAGAAAGAAGGTGAAGAAAGACGGAGCAAACACAAGGATAAAGATAAGGAGAAGAAAGGACGGTCAAATGATAAACAGGGCAATAAAGAGAAGAAAAAAGAAAAGAAAGCAAAGGAGAAGGTGGAAGAGAAGAATGCCATGGTAGATAAAACAAAGGAGATCAATAAGGATAACCTATTAGGTAGACATTCTACAAATACGAATACATCACAACTTCCTGACAGCAATATAGTTGCTGCAGTTGAGGAAAACTTAATTAAGAAACGGAAGGACTTTGAGCCTAATGGAGTCTTGCATGGTGAGTTAATTTGTATAAATGAACCACATAATTATTTGGCTATGGATCTATTAATTGAACTTGGTTGTGGTTTATACTGGTAACTCTTTTAGCTCTCAAAATAGTTTTCTTAATTTTCTTTCAGCAATTGACAACAGATCCAGTAAGTTGTTGAGGCCTACTTCTCATTCATTGAAGGAAAATGGTAGGATACTGGAACCGTGCTTGCGTTCCACCTTGCCTCCTTCAGAGAGACAGGCTGTGTCAAATGACCTTATTTTGGTTAGTAAAGAACGCAAGATTAATGGCATTATTGAAGCTCACCACCCACCTGCCTCTTCGAAACACAGGTCTGGACAAGTTGATCATCCTCAACCTCCTGCAATGCATAAAAAATCACCTCATCCAGATTCCAAGCACTTGAGTCAGGTATATTCAGTACCCAAAATGGAGGAATTGTCAGATTCTGATAGCCAAGATTGGCTATTTAGCGGCAATTCTTCCCTAGCAATGAAGCCCAAGTTGGAAGTTTCGGAGGCCAAGGAAATGCCAAACGTATGGGCCGATGCAATGCAGATAGAATCCGCTGATGTTTATGCTCTCCCTTATGTTATTCCATACTGATGGTCTCACAGGGCTTGATTTACCAACTTGATTCTATCTGACTCAGGGTAGGTGCCGCCTTGAAATTGTGTTGGAGTGGTGGTTCACCGACAGCCACGTCGCACCAACTCCCTTGAACACATGGAAGCACAGATCCTTTCTTCCACTGCTGCTCCTGCAGCTGGGGCTGGACATGTGATTTTGATAATCTTGCTATCAAATTGTTGATTGGAACAGCGTCATCTGGATTGCTCTTGATCGTTGAGGGGTGGGGGGTAGGTATGGAAGGTGGTTTTTGGCTTAGGACATTAAATAACTAATTCATTGAAATGAGAAAAATTCATAAAGGCAGTTCTGGGAGGTTTGCCTGCAGAGAGAGAGTGAGAGAGAGAGAGAGATAGAGAGGAGGTGTGAGCTTGTGGTATTTTATTTAATTTGCTTGGAGCTGAAAAAAGCACTTTCTAATTGAGAATGTGAAAGGAATTAGATGTGGTCTTTACAACTCCACCACAATTTTGATTTGTATCATAGAACTTTTTTATTTACAGAAATGTAAGATAGAGGGAAAAGGAAAAGTAGTGCAATTCATTTATGAGGCTGCGGATTAGTTTTCATATCTTCATTTTTCATTTCCTAGATGGTGTGATAAAAAGACTGCTGGTTTGCTTTTTGAAAATACTGAAAGCTTACTACCCCTTACTATTAGGCTCAAGAAATTTTCTCTTCTTGCCACCTTTCTGTTCTTCTATGAAAACACTTACTGGATTCTTCATAGATTAGTTTACTGTCAATTAGAATAGAACAGAGATGGAGACCGTAGAAGTTGATAGGTAGCAGGTGTTACTGTTTCTCACAATCATTGAAACAAATGTTGGTAAGTTGAAGAATCCTTTGTAAATCCTTCATCTTGATTCTTTCTGCCTTAAATCTTCTTTTAGTTTTATGACACTTTGTTTTGGGAAGTTTGAGATTATTGGATACTTGATAACTTTAAATCAATACCATAGGAACTTCTTTTTTTCCCCATCTTTTAAGGTTGGGTAGATTTAG

Coding sequence (CDS)

TTCTCTCACTTGCGTGTGACCTCCAATGACCCAAAAATATATATTTATTTTTTGAAAAAAAAAAGGAGAAGAAATAAAAAAGTAGTAATCACTAGGAAGGAAGAGGAAGTTAGAGGCATTCTCAAATCGTTTTTGTTTGAGAATAGTTGGGAGAGAGAACTCAGAGACAGAGATACAACCAAAGAGAAACAAAGAAGGAAACTCAGTAGAACCAAGAGAAGAAACCCCCCAATTTCTTTTTCTTTTTCTTATTCTTTTTTCTTTTTTCTTCTTTTTTTTTTCTTTTTTTTTTTTATAATACACTCTCAAATCTCTTACACACACAACAAGAGAAGAGCAGCAAGAGATTGA

Protein sequence

FSHLRVTSNDPKIYIYFLKKKRRRNKKVVITRKEEEVRGILKSFLFENSWERELRDRDTTKEKQRRKLSRTKRRNPPISFSFSYSFFFFLLFFFFFFFIIHSQISYTHNKRRAARD

Homology

The following BLAST results are available for this feature:

BLAST of Cucsat.G3757 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G3757 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G3757 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G3757 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 55..82
None	No IPR available	COILS	Coil	Coil	coord: 21..49
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 427..460
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..94
None	No IPR available	PANTHER	PTHR34660	MYB-LIKE PROTEIN X	coord: 106..526
None	No IPR available	PANTHER	PTHR34660:SF17	MYB-LIKE PROTEIN X	coord: 1..112
None	No IPR available	PANTHER	PTHR34660:SF17	MYB-LIKE PROTEIN X	coord: 106..526
None	No IPR available	PANTHER	PTHR34660	MYB-LIKE PROTEIN X	coord: 1..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G3757.T3	Cucsat.G3757.T3	mRNA
Cucsat.G3757.T1	Cucsat.G3757.T1	mRNA
Cucsat.G3757.T2	Cucsat.G3757.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016874	ligase activity