Cucsat.G3613 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G3613
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	thionin-like protein 2
Location	ctg1047: 22865 .. 23930 (+)
RNA-Seq Expression	Cucsat.G3613
Synteny	Cucsat.G3613

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCACACCAATTAAATTAAGTCTTAACTCACATCCAAATTTGAGAAAAATATGAAGTCAGTTGTTCTAATTTGTTTCATTTTGAGCTTAGTTGCAGGAAGATCCACAGCCTCATTTGGGAAGTGCTACGCCAAGTGCTTTATAGTGTGTGCTATCACACCAGGCATTCCCGTTGGCACTTGTGGGGCAAAATGCTTGGCTGATTGCCTTTTCATTGCTTCTTCCCCTATGGATTTGAATTATATGGACACTCATTACTTTTGTAAACTTGGTTGTGCCACTTCTCGTTGCACCAAATTCAGCACCAAGAAAGACCCTGGTAAGAAACTTTCTAATACTTCCGTTACCACGTATTCTAGTTATACAAATGTTTATAGAGAGACATTTAGATTTTTCATCGTTTGATTTTAAATGTTGTTGACCGTAAAAGTCACATTAATGTATGTAAATAATTTTCTATACTATTATATTCTATTAGGGAATTAATGTTTTCAACCCAAATCCTTATAATTTATGCTTTAAGCATTATGATGGTTGGCAAAAGGTCTCTCCCGATAAAAATTCATTAGAAGACCATTTTGCTGATCTCGAGCAAAACGTCATAAAAGGTTATCTTGTTGTGAGTGACAGTCAATAAGATTGGTAGTATTTATATTAAATTTTTATCTCATTATTTTTAGAGTTTTGATGGATGTTTTTAATCATGTTGGATTTTCTTTTAATGAACTTGACAGCCGAAAAGAAAGTAGAAAGCTGTGTGAACACATGTGATCAAACATGCACAAAAGCTTAAGAAGCAAAAAAGATGAAAGGAGAAGGAGCTGGGATTGGCTTCAATGAATAAACAAAAATCAGTGGTTAAAAAAAACATTGGTTTAAAAGTCATATTCCAGATTTAAGCATATATATATATATTTATAGTCCCAAGTTTGTGCATGTAGTTAATTATGGTCAATATGAAAAAAAAAAAAAGGTGTGGCTTTTTCTATAATTATATGAGAAAATGGTGTGTTATGTCAAAGACTTTTACCTATGCCTATTCATATGATTAATTACATATTTAAGTG

Coding sequence (CDS)

ATGAAGTCAGTTGTTCTAATTTGTTTCATTTTGAGCTTAGTTGCAGGAAGATCCACAGCCTCATTTGGGAAGTGCTACGCCAAGTGCTTTATAGTGTGTGCTATCACACCAGGCATTCCCGTTGGCACTTGTGGGGCAAAATGCTTGGCTGATTGCCTTTTCATTGCTTCTTCCCCTATGGATTTGAATTATATGGACACTCATTACTTTTGTAAACTTGGTTGTGCCACTTCTCGTTGCACCAAATTCAGCACCAAGAAAGACCCTGCCGAAAAGAAAGTAGAAAGCTGTGTGAACACATGTGATCAAACATGCACAAAAGCTTAA

Protein sequence

MKSVVLICFILSLVAGRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPMDLNYMDTHYFCKLGCATSRCTKFSTKKDPAEKKVESCVNTCDQTCTKA

Homology

[Close]

BLAST of Cucsat.G3613 vs. ExPASy Swiss-Prot
Match: A8MRP4 (Thionin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12663 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 1.4e-08
Identity = 36/113 (31.86%), Postives = 55/113 (48.67%), Query Frame = 0


Query: 1   MKSVVLICFILSLVAGRSTAS---FGKCYAKCFIVCAITPGIP-VGTCGAKCLADCLFIA 60
           M   V+I  ++  +  ++ A    F +CY  C + C      P    C   C  +CL   
Sbjct: 1   MLVAVMIVMVIGNLLAQTAAQKIPFKECYPACLVECKAGSKFPKYLKCPFTCTKECLQQP 60

Query: 61  SSP--MDLNYMDTHYFCKLGCATSRCTKFSTKKDPAEKKVESCVNTCDQTCTK 108
           S P     N  ++ YFCKLGCAT  C   S+ ++P  ++V +CV++C   CTK
Sbjct: 61  SPPSVSSNNIDESDYFCKLGCATYHCVSLSSIQNPNVERVSACVDSCSNKCTK 113

[Close]

BLAST of Cucsat.G3613 vs. ExPASy Swiss-Prot
Match: F4IDU9 (Thionin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At1g12660 PE=3 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.6e-04
Identity = 32/92 (34.78%), Postives = 45/92 (48.91%), Query Frame = 0


Query: 1  MKSVVLICFILSLVAGRSTASFGKCYAKCFIVCA-ITPGIPVGTCGAKCLADCLF--IAS 60
          M  V+++     L+   +  SF  CY  C + CA I P I    C   C+ DC    + S
Sbjct: 8  MLVVMMLVMGNMLIEAEAVMSFKLCYGGCLVACALIAPPIKKLFCPFLCIKDCKRRPMLS 67

Query: 61 SPMDLNYMD-THYFCKLGCATSRCTKFSTKKD 89
             +LN +D T  +C+LGCAT RC   S+  D
Sbjct: 68 FEANLNEIDQTGSYCELGCATDRCVSSSSIDD 99

[Close]

BLAST of Cucsat.G3613 vs. NCBI nr
Match: XP_038899787.1 (thionin-like protein 2 [Benincasa hispida])

HSP 1 Score: 204 bits (520), Expect = 3.81e-66
Identity = 94/108 (87.04%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 1   MKSVVLICFILSLVAGRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPM 60
           MKSV+LICFI+SLV GRSTASFGKCYAKCF+VCAITPGIP+GTCGAKCL DCLFIASSP+
Sbjct: 1   MKSVILICFIMSLVVGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLGDCLFIASSPL 60

Query: 61  DLNYMDTHYFCKLGCATSRCTKFSTKKDPAEKKVESCVNTCDQTCTKA 108
           D N++DTHYFCKLGCATS CTKFSTKKDPAEKKVESCVN+C QTC KA
Sbjct: 61  DFNHLDTHYFCKLGCATSLCTKFSTKKDPAEKKVESCVNSCGQTCIKA 108

[Close]

BLAST of Cucsat.G3613 vs. NCBI nr
Match: XP_023000407.1 (thionin-like protein 2 [Cucurbita maxima])

HSP 1 Score: 201 bits (511), Expect = 2.80e-64
Identity = 93/108 (86.11%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 1   MKSVVLICFILSLVAGRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPM 60
           MKSVV+ICFILSLVAGRSTASFGKCYAKCFIVCAITPG+P+GTCG KCLADCLF+AS+P 
Sbjct: 36  MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPR 95

Query: 61  DLNYMDTHYFCKLGCATSRCTKFSTKKDPAEKKVESCVNTCDQTCTKA 108
           DLN++DTHYFCKLGCATS CTKFSTK DPAEKKVESCVN+C +TC KA
Sbjct: 96  DLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTCLKA 143

[Close]

BLAST of Cucsat.G3613 vs. NCBI nr
Match: KAG6593441.1 (Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 199 bits (505), Expect = 7.40e-64
Identity = 92/108 (85.19%), Postives = 101/108 (93.52%), Query Frame = 0


Query: 1   MKSVVLICFILSLVAGRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPM 60
           MKS+V+ICFILSLVAGRSTASFGKCYAKCFIVCAITPG+P+GTCG KCLADCLF AS+P 
Sbjct: 1   MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPR 60

Query: 61  DLNYMDTHYFCKLGCATSRCTKFSTKKDPAEKKVESCVNTCDQTCTKA 108
           DLN++DTHYFCKLGCATS CTKFSTK DPAEKKVESCVN+C +TC KA
Sbjct: 61  DLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTCLKA 108

[Close]

BLAST of Cucsat.G3613 vs. NCBI nr
Match: KAG7025781.1 (Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 199 bits (505), Expect = 7.40e-64
Identity = 92/108 (85.19%), Postives = 101/108 (93.52%), Query Frame = 0


Query: 1   MKSVVLICFILSLVAGRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPM 60
           MKS+V+ICFILSLVAGRSTASFGKCYAKCFIVCAITPG+P+GTCG KCLADCLF AS+P 
Sbjct: 1   MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPT 60

Query: 61  DLNYMDTHYFCKLGCATSRCTKFSTKKDPAEKKVESCVNTCDQTCTKA 108
           DLN++DTHYFCKLGCATS CTKFSTK DPAEKKVESCVN+C +TC KA
Sbjct: 61  DLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTCLKA 108

[Close]

BLAST of Cucsat.G3613 vs. NCBI nr
Match: KAG7014098.1 (Thionin-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 183 bits (465), Expect = 9.34e-58
Identity = 87/108 (80.56%), Postives = 96/108 (88.89%), Query Frame = 0


Query: 1   MKSVVLICFILSLVAGRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPM 60
           MKSVV+ICFILSL+AGRSTASF KCYAKCFI CAITPGI +GTCGA CLA CLFIAS+PM
Sbjct: 1   MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPM 60

Query: 61  DLNYMDTHYFCKLGCATSRCTKFSTKKDPAEKKVESCVNTCDQTCTKA 108
           D N+M+THYFCKLGCATS CTKFSTK DP+EKKVE CV++C  TC KA
Sbjct: 61  DFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVERCVDSCAGTCIKA 108

[Close]

BLAST of Cucsat.G3613 vs. ExPASy TrEMBL
Match: A0A6J1KDK0 (thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111494667 PE=4 SV=1)

HSP 1 Score: 201 bits (511), Expect = 1.35e-64
Identity = 93/108 (86.11%), Postives = 102/108 (94.44%), Query Frame = 0


Query: 1   MKSVVLICFILSLVAGRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPM 60
           MKSVV+ICFILSLVAGRSTASFGKCYAKCFIVCAITPG+P+GTCG KCLADCLF+AS+P 
Sbjct: 36  MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPR 95

Query: 61  DLNYMDTHYFCKLGCATSRCTKFSTKKDPAEKKVESCVNTCDQTCTKA 108
           DLN++DTHYFCKLGCATS CTKFSTK DPAEKKVESCVN+C +TC KA
Sbjct: 96  DLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCVNSCSRTCLKA 143

[Close]

BLAST of Cucsat.G3613 vs. ExPASy TrEMBL
Match: A0A0A0KC18 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446640 PE=4 SV=1)

HSP 1 Score: 190 bits (483), Expect = 1.08e-60
Identity = 92/100 (92.00%), Postives = 94/100 (94.00%), Query Frame = 0


Query: 1   MKSVVLICFILSLVAGRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPM 60
           MKSVVLICFILSLVAGRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPM
Sbjct: 1   MKSVVLICFILSLVAGRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPM 60

Query: 61  DLNYMDTHYFCKLGCATSRCTKFSTKKDPAEKKVESCVNT 100
           DLNYMDTHYFCKLGCATSRCTKFSTKKDP +K   + V T
Sbjct: 61  DLNYMDTHYFCKLGCATSRCTKFSTKKDPGKKLSNTSVTT 100

[Close]

BLAST of Cucsat.G3613 vs. ExPASy TrEMBL
Match: A0A6J1DDL8 (thionin-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111019402 PE=4 SV=1)

HSP 1 Score: 161 bits (407), Expect = 3.57e-49
Identity = 79/109 (72.48%), Postives = 89/109 (81.65%), Query Frame = 0


Query: 2   KSVVLICFILSLVAGRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLF-IASSPM 61
             ++L+  +LSLVAG+STASFGKCYAKCF+VCAITPGIPVGTC AKCL DCLF  AS+  
Sbjct: 4   SELILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTA 63

Query: 62  DLN-YMDTHYFCKLGCATSRCTKFSTKKDPAEKKVESCVNTCDQTCTKA 108
           D N  +DT YFCKLGCATS CTKFSTKKDPAEKKV SCV++C Q C  A
Sbjct: 64  DFNDQIDTRYFCKLGCATSLCTKFSTKKDPAEKKVGSCVDSCSQKCINA 112

[Close]

BLAST of Cucsat.G3613 vs. ExPASy TrEMBL
Match: A0A5D3BCH5 (Thionin-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00550 PE=4 SV=1)

HSP 1 Score: 142 bits (359), Expect = 7.12e-42
Identity = 75/111 (67.57%), Postives = 82/111 (73.87%), Query Frame = 0


Query: 1   MKSVVLICFILSLVAGRSTASF--GKCYAKCFIVCAITPGIPV-GTCGAKCLADCLFIAS 60
           M+S+VLI FILSLVAGRST      K + KC   CAI P IPV   C  KC+ADC+ +AS
Sbjct: 1   MRSIVLIHFILSLVAGRSTPVLDTAKWFVKCMAECAILPIIPVVSICAVKCMADCIPVAS 60

Query: 61  SPMDLNYMDTHYFCKLGCATSRCTKFSTKKDPAEKKVESCVNTCDQTCTKA 108
           SPMDLN MDTHYFCKLGC T RCTK STKKD  E KVE+C NTCDQTC KA
Sbjct: 61  SPMDLNRMDTHYFCKLGCTTYRCTKLSTKKDLVENKVETCGNTCDQTCMKA 111

[Close]

BLAST of Cucsat.G3613 vs. ExPASy TrEMBL
Match: F6HX25 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_09s0002g04840 PE=4 SV=1)

HSP 1 Score: 119 bits (298), Expect = 2.20e-32
Identity = 55/105 (52.38%), Postives = 74/105 (70.48%), Query Frame = 0


Query: 2   KSVVLICFILSLVAGRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPMD 61
           +++V++  ++ ++ G+STASF  CY KCFI C ITP     +C  +CL DC+ I S P+D
Sbjct: 7   RALVMVGLVMGMLVGQSTASFKDCYTKCFIFCIITPNNTAFSCSLECLKDCV-IPSHPLD 66

Query: 62  LNYMDTHYFCKLGCATSRCTKFSTKKDPAEKKVESCVNTCDQTCT 106
           +   DT YFCKLGCA+S CT  STKK+PA +KVESCVN+C   CT
Sbjct: 67  IETADTTYFCKLGCASSLCTNLSTKKNPAGEKVESCVNSCSNKCT 110

[Close]

BLAST of Cucsat.G3613 vs. TAIR 10
Match: AT1G12663.1 (Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. )

HSP 1 Score: 60.5 bits (145), Expect = 9.8e-10
Identity = 36/113 (31.86%), Postives = 55/113 (48.67%), Query Frame = 0


Query: 1   MKSVVLICFILSLVAGRSTAS---FGKCYAKCFIVCAITPGIP-VGTCGAKCLADCLFIA 60
           M   V+I  ++  +  ++ A    F +CY  C + C      P    C   C  +CL   
Sbjct: 1   MLVAVMIVMVIGNLLAQTAAQKIPFKECYPACLVECKAGSKFPKYLKCPFTCTKECLQQP 60

Query: 61  SSP--MDLNYMDTHYFCKLGCATSRCTKFSTKKDPAEKKVESCVNTCDQTCTK 108
           S P     N  ++ YFCKLGCAT  C   S+ ++P  ++V +CV++C   CTK
Sbjct: 61  SPPSVSSNNIDESDYFCKLGCATYHCVSLSSIQNPNVERVSACVDSCSNKCTK 113

[Close]

BLAST of Cucsat.G3613 vs. TAIR 10
Match: AT1G12672.2 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12663.1). )

HSP 1 Score: 49.3 bits (116), Expect = 2.3e-06
Identity = 25/63 (39.68%), Postives = 36/63 (57.14%), Query Frame = 0


Query: 48  CLADCLFIASSPMD----LNYMDTHYFCKLGCATSRCTKFSTKKDPAEKKVESCVNTCDQ 107
           C+  CL   SS MD    +N+ D  Y+CKLGC+T  C   S+ ++P   KV  CV++C  
Sbjct: 41  CIKTCLEPPSSQMDSTNEINHND--YYCKLGCSTHHCASLSSIQNPNVDKVVDCVDSCSD 100

[Close]

BLAST of Cucsat.G3613 vs. TAIR 10
Match: AT1G12660.1 (Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. )

HSP 1 Score: 47.0 bits (110), Expect = 1.1e-05
Identity = 32/92 (34.78%), Postives = 45/92 (48.91%), Query Frame = 0


Query: 1  MKSVVLICFILSLVAGRSTASFGKCYAKCFIVCA-ITPGIPVGTCGAKCLADCLF--IAS 60
          M  V+++     L+   +  SF  CY  C + CA I P I    C   C+ DC    + S
Sbjct: 8  MLVVMMLVMGNMLIEAEAVMSFKLCYGGCLVACALIAPPIKKLFCPFLCIKDCKRRPMLS 67

Query: 61 SPMDLNYMD-THYFCKLGCATSRCTKFSTKKD 89
             +LN +D T  +C+LGCAT RC   S+  D
Sbjct: 68 FEANLNEIDQTGSYCELGCATDRCVSSSSIDD 99

[Close]

BLAST of Cucsat.G3613 vs. TAIR 10
Match: AT1G12672.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12663.1); Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 7.3e-05
Identity = 19/49 (38.78%), Postives = 30/49 (61.22%), Query Frame = 0


Query: 58  SPMDLNYMDTHYFCKLGCATSRCTKFSTKKDPAEKKVESCVNTCDQTCT 107
           S  ++N+ D  Y+CKLGC+T  C   S+ ++P   KV  CV++C   C+
Sbjct: 17  STNEINHND--YYCKLGCSTHHCASLSSIQNPNVDKVVDCVDSCSDKCS 63

The following BLAST results are available for this feature:

BLAST of Cucsat.G3613 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8MRP4	1.4e-08	31.86	Thionin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12663 PE=3 SV=1	[more]
F4IDU9	1.6e-04	34.78	Thionin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At1g12660 PE=3 SV=1	[more]

BLAST of Cucsat.G3613 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899787.1	3.81e-66	87.04	thionin-like protein 2 [Benincasa hispida]	[more]
XP_023000407.1	2.80e-64	86.11	thionin-like protein 2 [Cucurbita maxima]	[more]
KAG6593441.1	7.40e-64	85.19	Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7025781.1	7.40e-64	85.19	Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG7014098.1	9.34e-58	80.56	Thionin-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cucsat.G3613 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KDK0	1.35e-64	86.11	thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111494667 PE=4 SV=1	[more]
A0A0A0KC18	1.08e-60	92.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446640 PE=4 SV=1	[more]
A0A6J1DDL8	3.57e-49	72.48	thionin-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111019402 PE=4 SV=1	[more]
A0A5D3BCH5	7.12e-42	67.57	Thionin-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold8...	[more]
F6HX25	2.20e-32	52.38	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_09s0002g04840 PE=4 SV=...	[more]

BLAST of Cucsat.G3613 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G12663.1	9.8e-10	31.86	Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant t...	[more]
AT1G12672.2	2.3e-06	39.68	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]
AT1G12660.1	1.1e-05	34.78	Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant t...	[more]
AT1G12672.1	7.3e-05	38.78	unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038975	Thionin-like protein	PANTHER	PTHR36312	THIONIN-LIKE PROTEIN 1	coord: 2..107
None	No IPR available	PANTHER	PTHR36312:SF1	THIONIN-LIKE PROTEIN 1	coord: 2..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G3613.T1	Cucsat.G3613.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane