Cucsat.G3508 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G3508
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	nuclear pore complex protein NUP50A-like
Location	ctg1047: 30189 .. 34881 (-)
RNA-Seq Expression	Cucsat.G3508
Synteny	Cucsat.G3508

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGATAAAAAAACGTACAATTAAAAAAAATAATAACAAATAAGAAAGCCGCAAGAAGGAGAACCCAACCAAAAACCCTCCTCCATATTTCAGTCTCTCTTTTTTCTCTTTCCGAACCCTCGTTTCTCTCTCATTTCTTCTACTTCTCATACAGCTTTGCTTGCATTCTCGGTAATTCCTGCTCCATTCCCTTATTATTATTATTTTTTTAATTTTTCCATTTATGAGCACAGCAGGTTTAGATGTGTTATTCTATTCGATTTTCTCTTCTACTTTTGCTGTTTCTATTTTCTAATTTCACTGCCTCTGTGTCTCTCTGTCTGTCTGTCTTTCTGTTTCGTTGTTCTTTGAATCTTTGAATTTTTTTCTGTGTTTTAGAGTTGTGGTAGCTTTTTCTTTATAATGATAGCTGGTGGCGATGTTATTGATCTTAATTTGTGTTTGGATTGGTACACTTCAACCCCTTGCGCCCTTTTTTTGGTTTTTGGGTTTCAATTGTGGGTGAATACAAAACATAAAGAGCCAGGGAGAGTATTGGGTGATTTTATTCTGCTATAGAGAAAAGGGAAAAGGGGACGAAAGAAATGAACCCCCAAAATGGAATGTTCAATTTAGAGATTCCTTTTATTCATTTAGTTGTTGGCTTGAACTTTTTTGGATTATTATTACGTTATCTGTTATTGATCTTTGTTGTTTATTTCTTTCCGTGAACAAAGGCATTTACTGATTGGGTTTTTATTATTCATTTTTTATTATCTTGGGTATTAATAAACAGAGGCTTTATTAAGCAATTAATGTTGGTTTGATGCGGTATTGAACTTTAGGGTATTAATAAACAGAACCTTTCAAAAGATTTGGAGGTTTAAGATGCAATCCCAAGAGTTTCACCTTTTTAGTTAATTATTTGATATTGTGCGTAATCATTGCACTAATGAGTTTAGTGAATATTATGAGGTTATTAAGTGGATTGTTGAATTCTGTTGGCTGTACTACTTGACTGGATAATTCTCTTGATCTTTGAGCTTTTTTATACAATGGCTGGTGGCTAATGTATTAGTAGTCTTCTCTTCTCATCGTAGATGCAGTTTTGAATTATCAATCATGGAAACCCTTCAATCTCTTGGGCTTTTACAAGGCTATTGTTTACTGTCACTGACTGTTCACGGATGCATATTCAATGTAGCTTGGTTGTTCAATTAAATTGTGAAAGTGCTTTATTGTGTGTTGTATTATTTTTGGCTTCTTTTGACAGACGGCCATCTGTTTCTTGTTTGAGTTCTTATTTATGCTGTAACGACTGTTATATGATTTTCTGTGGTTGGAATATACATGCAGATAAATTTAAAATGAAGCGGTGGTTAAATAGTTTAGGGTGGTAACTGATCTTTTAAACTTTTTTTGTTTTTAATTCAATATCTTCTACTTCATTCTATTTACATTAAATGTCTGTGAGGCAATTTTCTATATGGTTACTATGCCTTTAGACTTGGGTTAAGACCCATCAAAAAGTTCCTGGTGCATTTATACTGTACCTGCCTGTCAGGATTCAGAGTTATATTCATCATTCAATCTAAGAATGAGGGTTGAATTGGGTTAATTTAAAATGATGAATGCTTGGTACTAGATGGTTTTGAGGATTACGTTACCCTATCTATCTCAACTCATTACCATCATTAATGTTTGCATCAACCCTTATTATCATAAAGATAGCTGTCTCTGATTAGCCTCATCTTGTGGTGCTATAGATTATCTTGAGAAGATTATGGCAGGCTATGTCAAGTATGAGGCAACGAGGGTTTCTGGTGGGTGGGAAATTGAGTAGATGGAGAAAGAGAACACAAGTGTGTTTTTTGGTGGTGTGAAGGAGGCAGAAAGATAGGGGAGAGATAGGATCTTTTTGGATATAATTACTATTTAAGAAATTGATAAAAAATAAAAAATAATGCCCCATAAGCAATATGAGGATTGAAATATTAGGGGTTGGATGACATATCAACATAATTAATATTGTAAAATTATTGAAATTTTAAATATAATAAATATGTCGAAATGTTCTATAAATATATTTGGCTCCAATGCTATTCTATTGTAGTCACTAATGATTATTTCTTTCGGCACCATATTCAACCTTTTGGCCCTGGGATTACTATTATTTATGGATCAAGGCATAGCTTATGTTGATTATTATGAATTGAGATTTATTTTAGTAGGGGTACTTAATTTTTAATAACTTTAGTTGATAAATAAGTTCCAAAATAGAAATTCCAAATATGTCAAACACAAGGACAAACAACTTCTATTCATAAGAATTTCTGAGTGATTCCTTGTAAAAGTCAAACCGAGGAATTTTTATTCTCATGTATGCTTAATATCCAGATCCAGATATCCTATTTCTTGCATCTGAGTCTCATTCAAACATCTGAAACAAATAGTCTACAAGAGATTGCTTGCTACTATCTTGCTAAAAAAGAGATTGTCTATTTGTGTAGTTCTCATCTCTTAGTTGTTAGTTTTGTTGCCGTTAATCACCCCCTTCACTTTTCTCTAGGCTTTACCTTTAAATTTTAGCTTAATCTGTTTGTGTTTGTAAGAAGTTCTTCCCTAGATCTTGTTGAGTTATAATGTTTGTGCAATTTCCAGATATATATTTTCTGCTTCTGCTTTATAGCGGAACTCCAAGCTCTTGTTGATTTGCTTGACTCTTCAATGGGGGATGCTGAAAATGCAACATCTACTAAGAAGAGGGCTGCTGGAAGGGAGCTATCACGAGATAACCCCGGGCTTGACGATGATGAAGATGTTTCTGAGCAAGAGACTGGAACTTTTAAGCGGGCTAGTGAAGAGGTGCTAGCCACAAGAAGAATTGTCAAAGTACGTCGTGGTTCAACTGCTTCTGCCCCATCTTCAAATCCTTTTGCTGGAATTCGCTTGGTACCTCCAACTGAAAATAGTGGAAGTGTTGCAGAAGTTAGACGCGATACAGAGGCAGCTGGTGAGAAAGCAGGTTCAGATGAGGCAAATGGAAAAGACATTCCCCATGAAATGACTCAAAAAGATGGGGATCATAGTGATGATCCAGTCCAATCTAAAATTGACACATCAGAGGCCAAGTCTGTTCCAAAGGTGCAGCCTGTCGATCAGAATAGCACTGTTTCAAGTGAATCTGCCATATCTAAGGTAGATGATAACCTAGTTTCTGAAAGCAATAAGATTGAAAATGAAGAACCAGTGGGAGGAGACAAGACCGGCAATGAGGAGCTTGTAAGAGACGCTGAGAAGGAATCTGAGAATGATGAATGTGCAAGTGGTAATAAGAATGAAGATGCAGATCCTGAAAGAGGTGATAAGAACGAAAGTGAAGAACCCAGTGAAGGAAATGAGATTCAAAACAAGGAAACTGGGGAACTAGAAAAAACAGAAAGTGAAGAAAACAAAGAAGACAAAAGTGAAGGAGAGCCTAGTAAGGAGGCTGCTCCTTTGAACTCATTCCAACAATTATCGAGCAGCCAGAATGCGTTCACTGGTCTTGCGGGTACTGGATTTTCGACATCTACATTCTCCTTTGGTAACATACCTAAGGATGGGGTTGGCCTAACTACTAGTTTTGGTCTCTCTAATAATGGGAGCTCCGCCCTCTTTGGTACTTCAGGGTCTTCCATTGTTTCCAAGAGTGAGAAAAGTGGCTTTCCATCAATGCAAGAGGTCGCAGTTGAAACTGGTGAAGAAAATGAAAAAGTGGTTTTCAATGCTGATTCTATATTGTTTGAGTTCATCGATGGATCATGGAAAGAACGTGGAAAGGGGGAGCTGAAAGTCAATGTCCCTACGAGTGGGATCGGCAGAGGGAGGATTCTTATGAGAGCTAGGGGAAATTACAGGTTAATTTTGAATGCAAGTCTTTACCCTGACATGAAGCTCACAAACATGGACAAGAGAGGTATCACCTTTGCCTGCATGAATAGCACCAACGATGGGAAGGTTGGTCTCTCAACATTGGGTGTGAAGTTCAAGGATGTATCCATAGTGGAGGAGTTTCGAGCAGCAGTCACCGAGCATAAAGGTAAAGCTTCTTCTACAGTTCTGAAAACGCCTGAGAATTCTCCTTAAGAACTCGACGATCTGAAAGTTACACATGGTGAAGAAAAGGTGCATATTTTCTACTCTGTAGTGGGAGCATCTATCTCGAAGGACAGCTCAAGCAAGTAGCTTTTTTTTTCTTCCGGTTCGGCGTACCATAAGCCATTATGTAGCAGAGTCATAGAATCTTACTCATTTTGTTGTAGCTGTATTTGTCATAATAGACTCCTCTTCTACGCATATCTTTTGGATGGAACATATCTTGAGGCTTGAATATGCTCCCAAACCATGGAATTGGCAGAATCTCATAATTTTCCATTTAACTTTGCGATATGAACCAGCTTTCGTGCCCTCTAAGATTGAATATTTTCTTCACATATAGAAAGGCAAAAAAGAATGAAATGGAAAAATGCTACTTCTGTTTGGACATGGGATCATGATGATATCACAAACAAGTATATACTGTCCGTTGAAAGTTGAGATTCTATAAACTGCCTTCCTGGTTTTCATCCTAGGTTTTGAGTTTTTGGTTTTTAATAGTGAAGCGTTTAACCGTTGTGTGTTGTGTCTTGTAGTTTATTAAAATTTCAATTTTGTATTTAATAAATTTAAAATTT

Coding sequence (CDS)

ATGGGGGATGCTGAAAATGCAACATCTACTAAGAAGAGGGCTGCTGGAAGGGAGCTATCACGAGATAACCCCGGGCTTGACGATGATGAAGATGTTTCTGAGCAAGAGACTGGAACTTTTAAGCGGGCTAGTGAAGAGGTGCTAGCCACAAGAAGAATTGTCAAAGTACGTCGTGGTTCAACTGCTTCTGCCCCATCTTCAAATCCTTTTGCTGGAATTCGCTTGGTACCTCCAACTGAAAATAGTGGAAGTGTTGCAGAAGTTAGACGCGATACAGAGGCAGCTGGTGAGAAAGCAGGTTCAGATGAGGCAAATGGAAAAGACATTCCCCATGAAATGACTCAAAAAGATGGGGATCATAGTGATGATCCAGTCCAATCTAAAATTGACACATCAGAGGCCAAGTCTGTTCCAAAGGTGCAGCCTGTCGATCAGAATAGCACTGTTTCAAGTGAATCTGCCATATCTAAGGTAGATGATAACCTAGTTTCTGAAAGCAATAAGATTGAAAATGAAGAACCAGTGGGAGGAGACAAGACCGGCAATGAGGAGCTTGTAAGAGACGCTGAGAAGGAATCTGAGAATGATGAATGTGCAAGTGGTAATAAGAATGAAGATGCAGATCCTGAAAGAGGTGATAAGAACGAAAGTGAAGAACCCAGTGAAGGAAATGAGATTCAAAACAAGGAAACTGGGGAACTAGAAAAAACAGAAAGTGAAGAAAACAAAGAAGACAAAAGTGAAGGAGAGCCTAGTAAGGAGGCTGCTCCTTTGAACTCATTCCAACAATTATCGAGCAGCCAGAATGCGTTCACTGGTCTTGCGGGTACTGGATTTTCGACATCTACATTCTCCTTTGGTAACATACCTAAGGATGGGGTTGGCCTAACTACTAGTTTTGGTCTCTCTAATAATGGGAGCTCCGCCCTCTTTGGTACTTCAGGGTCTTCCATTGTTTCCAAGAGTGAGAAAAGTGGCTTTCCATCAATGCAAGAGGTCGCAGTTGAAACTGGTGAAGAAAATGAAAAAGTGGTTTTCAATGCTGATTCTATATTGTTTGAGTTCATCGATGGATCATGGAAAGAACGTGGAAAGGGGGAGCTGAAAGTCAATGTCCCTACGAGTGGGATCGGCAGAGGGAGGATTCTTATGAGAGCTAGGGGAAATTACAGGTTAATTTTGAATGCAAGTCTTTACCCTGACATGAAGCTCACAAACATGGACAAGAGAGGTATCACCTTTGCCTGCATGAATAGCACCAACGATGGGAAGGTTGGTCTCTCAACATTGGGTGTGAAGTTCAAGGATGTATCCATAGTGGAGGAGTTTCGAGCAGCAGTCACCGAGCATAAAGGTAAAGCTTCTTCTACAGTTCTGAAAACGCCTGAGAATTCTCCTTAA

Protein sequence

MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGSTASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDHSDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKTGNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEKTESEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSWKERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNSTNDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP

Homology

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BLAST of Cucsat.G3508 vs. ExPASy Swiss-Prot
Match: Q9C829 (Nuclear pore complex protein NUP50A OS=Arabidopsis thaliana OX=3702 GN=NUP50A PE=1 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.3e-84
Identity = 224/488 (45.90%), Postives = 295/488 (60.45%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRG 60
           MGD+EN    +KKR A ++LSRDNPGLDDD+D +E E+GTFK+AS+EVLA+RRIV+V+R 
Sbjct: 1   MGDSENVQQPSKKRGALKQLSRDNPGLDDDDDSAELESGTFKKASDEVLASRRIVRVKRK 60

Query: 61  STASAP--SSNPFAGIRLVPPTENS----GSVAEVRRDTEAAGEKAGSDEANGKDIPHEM 120
             ++AP  +SNPFAGI+LVP T  +    G+ A +     A  E    D     DI    
Sbjct: 61  EPSAAPVAASNPFAGIQLVPTTAPASTPVGTNAPLAESKLAPAEAVVEDNQKASDI---- 120

Query: 121 TQKDGDHSDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVD----DNLVSESNKI 180
             ++GD  D     K+D  +A      +  D++     +SA  +V       +VS    +
Sbjct: 121 --EEGDEVD---SKKVDVKDAVGEETEKTKDKDDNHCGKSADVQVAATEVAQMVSCDTNV 180

Query: 181 ENEEPVGGDKTGNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNK 240
            N    G D+T         EK+S                  GD+ E +E  EGN I+  
Sbjct: 181 CNNAVEGTDQTD-----FPLEKDS-----------------GGDQAEKKE-KEGNGIE-- 240

Query: 241 ETGELEKTESEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300
                             E + + +    +SFQQ SS++NAFTGLA T  S S+FSFG +
Sbjct: 241 ------------------EADKNGDNGAFSSFQQHSSNKNAFTGLASTEASGSSFSFGLV 300

Query: 301 PKD---GVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVF 360
            +D   G G    FGL ++ SS++FG +GSSI+ KSE SGFP  QEV+ ETGEENEKV F
Sbjct: 301 SQDGSTGTGSLFGFGLPSSNSSSIFGATGSSIIKKSEGSGFPPKQEVSTETGEENEKVAF 360

Query: 361 NADSILFEFIDGSWKERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTN 420
           +ADSI+FE++DG WKERGKGELKVNV +S  G+ R++MRA+GNYRLILNASLYP+MKL N
Sbjct: 361 SADSIMFEYLDGGWKERGKGELKVNV-SSNDGKARLVMRAKGNYRLILNASLYPEMKLAN 420

Query: 421 MDKRGITFACMNSTNDGKVGLSTLGVKFKDVSIVEEFRAAVTEHK--------GKASSTV 467
           MDK+GITFAC+NS ++GK GLST  +KFKD +IVEEFR A+ +HK         + S+  
Sbjct: 421 MDKKGITFACVNSVSEGKEGLSTFALKFKDPTIVEEFRVAIDKHKDSKPMEKAAEKSALP 435

[Close]

BLAST of Cucsat.G3508 vs. ExPASy Swiss-Prot
Match: Q9LW88 (Nuclear pore complex protein NUP50B OS=Arabidopsis thaliana OX=3702 GN=NUP50B PE=1 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 7.7e-80
Identity = 221/485 (45.57%), Postives = 294/485 (60.62%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGL-DDDEDVSEQETGTFKRASEEVLATRRIVKVRR 60
           MGD++NA   ++KR A +ELSRDNPGL DDDED S  E+GTF  AS+EVLA+RRI++VRR
Sbjct: 1   MGDSDNAIPFSRKRTALKELSRDNPGLDDDDEDTSALESGTFNTASKEVLASRRIIRVRR 60

Query: 61  --GSTASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQK 120
              S  + P+SNPF GIRLVP T  + S A        +   AG  E           + 
Sbjct: 61  TDRSATAPPASNPFTGIRLVPFTAPAPSTAAAETTKPLS---AGKQETLADGRSDATKET 120

Query: 121 DGDHSDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVG 180
           DGD       SK  +    +V K +      +  ++  I   +  +    N +E     G
Sbjct: 121 DGD-------SKEKSDAIDAVGKQETQGDEISAKTKDIIDGGEKEMSEAVNSVEG----G 180

Query: 181 GDKTGNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEK 240
           G    NE    D  K +   E A+G +         D N +    EG++   K+TG   +
Sbjct: 181 GAVNKNE----DEIKTTMVTEVAAGEETVK------DDNNNSNTVEGSDCVVKDTGG-NQ 240

Query: 241 TESEENKEDKSEG-EPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDG-- 300
           TE E  + D +E  E + ++  L+SF Q SSS+NAFTGLA TGFS S+FSFG +P++G  
Sbjct: 241 TEKEGKEGDGNEDTEKNGDSGALSSFHQHSSSKNAFTGLASTGFSASSFSFGLVPQEGST 300

Query: 301 ----VGLTTSFGLSNNGSSALFGTS-GSSIVSKSEK--SGFPSMQEVAVETGEENEKVVF 360
                  + SFG +NNG+S+LFG S  +SI +KS +  + FPS Q+V+VETGEENEK  F
Sbjct: 301 GSGSEQSSFSFGQANNGNSSLFGASVATSITTKSTETTTAFPSKQDVSVETGEENEKAAF 360

Query: 361 NADSILFEFIDGSWKERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTN 420
            ADS++FE+++G WKERGKGELKVN+ T+   + R++MR++GNYRL LNASLYP+MKL  
Sbjct: 361 TADSVMFEYLEGGWKERGKGELKVNISTTENRKARLVMRSKGNYRLTLNASLYPEMKLAK 420

Query: 421 MDKRGITFACMNSTNDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASSTV-----LKT 467
           MDK+GITFAC+NS +D K GLSTL +KFKD ++VEEFRA + EHK    S       LKT
Sbjct: 421 MDKKGITFACVNSVSDAKDGLSTLALKFKDPTVVEEFRAVIEEHKDSKPSVAEAAAPLKT 460

[Close]

BLAST of Cucsat.G3508 vs. ExPASy Swiss-Prot
Match: A0A0B4K7J2 (E3 SUMO-protein ligase RanBP2 OS=Drosophila melanogaster OX=7227 GN=Nup358 PE=1 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.5e-11
Identity = 45/133 (33.83%), Postives = 69/133 (51.88%), Query Frame = 0


Query: 328  PSMQEVAVETGEENEKVVFNADSILFEFIDGSWKERGKGELKVNVPTSGIGRGRILMRAR 387
            P   EV V TGEE E + F + + LF ++D  WKERG G +K+ +     G  R+LMR  
Sbjct: 1315 PLPDEVEVRTGEEGEDIKFTSRAKLFRYVDKEWKERGTGVIKI-LCDKATGVSRVLMRRD 1374

Query: 388  GNYRLILNASLYPDMKLT----NMDKRGITFACMNSTNDGKVGLSTLGVKFKDVSIVEEF 447
              +++  N ++  D+ +     + DK+ + +A  N   D +V L    V+FK   + EEF
Sbjct: 1375 QTHKVCANHTITADITINVANQDKDKKSLLWAA-NDFADEQVTLERFLVRFKTGELAEEF 1434

Query: 448  RAAVTEHKGKASS 457
            R A T+    A S
Sbjct: 1435 RVAFTKASEAAKS 1445

[Close]

BLAST of Cucsat.G3508 vs. NCBI nr
Match: XP_011659558.1 (nuclear pore complex protein NUP50A [Cucumis sativus] >KGN45347.1 hypothetical protein Csa_016470 [Cucumis sativus])

HSP 1 Score: 859 bits (2220), Expect = 2.39e-313
Identity = 466/466 (100.00%), Postives = 466/466 (100.00%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDH 120

Query: 121 SDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKT 180
           SDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKT
Sbjct: 121 SDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKT 180

Query: 181 GNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEKTESE 240
           GNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEKTESE
Sbjct: 181 GNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEKTESE 240

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360

Query: 361 KERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 361 KERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420

Query: 421 NDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466
           NDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP
Sbjct: 421 NDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466

[Close]

BLAST of Cucsat.G3508 vs. NCBI nr
Match: XP_008462135.1 (PREDICTED: nuclear pore complex protein NUP50A isoform X1 [Cucumis melo] >XP_008462136.1 PREDICTED: nuclear pore complex protein NUP50A isoform X1 [Cucumis melo] >XP_016902854.1 PREDICTED: nuclear pore complex protein NUP50A isoform X1 [Cucumis melo])

HSP 1 Score: 806 bits (2081), Expect = 3.59e-292
Identity = 440/466 (94.42%), Postives = 448/466 (96.14%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPG DDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAA EKAGSDEANGKDIPHE+TQKDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120

Query: 121 SDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKT 180
           SD+PV+ KIDTSEAKSVPKVQPVDQNSTV SESAISKVDDNLV ESNKIENEEP GGDKT
Sbjct: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180

Query: 181 GNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEKTESE 240
           GNEELVRDAEKESENDEC S +KNED  P RGDKNE+EEPSEGNEIQNKETGE EKTE+E
Sbjct: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360

Query: 361 KERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSG GRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420

Query: 421 NDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466
            DGK GLST GVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP
Sbjct: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466

[Close]

BLAST of Cucsat.G3508 vs. NCBI nr
Match: TYK04047.1 (nuclear pore complex protein NUP50A isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 806 bits (2081), Expect = 1.02e-291
Identity = 440/466 (94.42%), Postives = 448/466 (96.14%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPG DDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 29  MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 88

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAA EKAGSDEANGKDIPHE+TQKDGDH
Sbjct: 89  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 148

Query: 121 SDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKT 180
           SD+PV+ KIDTSEAKSVPKVQPVDQNSTV SESAISKVDDNLV ESNKIENEEP GGDKT
Sbjct: 149 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 208

Query: 181 GNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEKTESE 240
           GNEELVRDAEKESENDEC S +KNED  P RGDKNE+EEPSEGNEIQNKETGE EKTE+E
Sbjct: 209 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 268

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 269 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 328

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 329 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 388

Query: 361 KERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSG GRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 389 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 448

Query: 421 NDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466
            DGK GLST GVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP
Sbjct: 449 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 494

[Close]

BLAST of Cucsat.G3508 vs. NCBI nr
Match: XP_008462138.1 (PREDICTED: nuclear pore complex protein NUP50A isoform X2 [Cucumis melo])

HSP 1 Score: 778 bits (2008), Expect = 4.21e-281
Identity = 427/457 (93.44%), Postives = 435/457 (95.19%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPG DDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAA EKAGSDEANGKDIPHE+TQKDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120

Query: 121 SDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKT 180
           SD+PV+ KIDTSEAKSVPKVQPVDQNSTV SESAISKVDDNLV ESNKIENEEP GGDKT
Sbjct: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180

Query: 181 GNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEKTESE 240
           GNEELVRDAEKESENDEC S +KNED  P RGDKNE+EEPSEGNEIQNKETGE EKTE+E
Sbjct: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360

Query: 361 KERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSG GRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420

Query: 421 NDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASST 457
            DGK GLST GVKFKDVSIVEEFRAAVTEHK   S T
Sbjct: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKVGVSIT 457

[Close]

BLAST of Cucsat.G3508 vs. NCBI nr
Match: KAA0059280.1 (nuclear pore complex protein NUP50A isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 777 bits (2007), Expect = 1.13e-280
Identity = 425/451 (94.24%), Postives = 433/451 (96.01%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPG DDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 29  MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 88

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAA EKAGSDEANGKDIPHE+TQKDGDH
Sbjct: 89  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 148

Query: 121 SDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKT 180
           SD+PV+ KIDTSEAKSVPKVQPVDQNSTV SESAISKVDDNLV ESNKIENEEP GGDKT
Sbjct: 149 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 208

Query: 181 GNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEKTESE 240
           GNEELVRDAEKESENDEC S +KNED  P RGDKNE+EEPSEGNEIQNKETGE EKTE+E
Sbjct: 209 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 268

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 269 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 328

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 329 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 388

Query: 361 KERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSG GRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 389 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 448

Query: 421 NDGKVGLSTLGVKFKDVSIVEEFRAAVTEHK 451
            DGK GLST GVKFKDVSIVEEFRAAVTEHK
Sbjct: 449 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK 479

[Close]

BLAST of Cucsat.G3508 vs. ExPASy TrEMBL
Match: A0A0A0KAD0 (RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G446650 PE=4 SV=1)

HSP 1 Score: 859 bits (2220), Expect = 1.16e-313
Identity = 466/466 (100.00%), Postives = 466/466 (100.00%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDH 120

Query: 121 SDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKT 180
           SDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKT
Sbjct: 121 SDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKT 180

Query: 181 GNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEKTESE 240
           GNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEKTESE
Sbjct: 181 GNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEKTESE 240

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360

Query: 361 KERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 361 KERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420

Query: 421 NDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466
           NDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP
Sbjct: 421 NDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466

[Close]

BLAST of Cucsat.G3508 vs. ExPASy TrEMBL
Match: A0A1S4E3Q0 (nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500566 PE=4 SV=1)

HSP 1 Score: 806 bits (2081), Expect = 1.74e-292
Identity = 440/466 (94.42%), Postives = 448/466 (96.14%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPG DDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAA EKAGSDEANGKDIPHE+TQKDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120

Query: 121 SDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKT 180
           SD+PV+ KIDTSEAKSVPKVQPVDQNSTV SESAISKVDDNLV ESNKIENEEP GGDKT
Sbjct: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180

Query: 181 GNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEKTESE 240
           GNEELVRDAEKESENDEC S +KNED  P RGDKNE+EEPSEGNEIQNKETGE EKTE+E
Sbjct: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360

Query: 361 KERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSG GRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420

Query: 421 NDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466
            DGK GLST GVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP
Sbjct: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466

[Close]

BLAST of Cucsat.G3508 vs. ExPASy TrEMBL
Match: A0A5D3BX12 (Nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002470 PE=4 SV=1)

HSP 1 Score: 806 bits (2081), Expect = 4.96e-292
Identity = 440/466 (94.42%), Postives = 448/466 (96.14%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPG DDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 29  MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 88

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAA EKAGSDEANGKDIPHE+TQKDGDH
Sbjct: 89  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 148

Query: 121 SDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKT 180
           SD+PV+ KIDTSEAKSVPKVQPVDQNSTV SESAISKVDDNLV ESNKIENEEP GGDKT
Sbjct: 149 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 208

Query: 181 GNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEKTESE 240
           GNEELVRDAEKESENDEC S +KNED  P RGDKNE+EEPSEGNEIQNKETGE EKTE+E
Sbjct: 209 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 268

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 269 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 328

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 329 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 388

Query: 361 KERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSG GRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 389 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 448

Query: 421 NDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 466
            DGK GLST GVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP
Sbjct: 449 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLKTPENSP 494

[Close]

BLAST of Cucsat.G3508 vs. ExPASy TrEMBL
Match: A0A1S3CHQ9 (nuclear pore complex protein NUP50A isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500566 PE=4 SV=1)

HSP 1 Score: 778 bits (2008), Expect = 2.04e-281
Identity = 427/457 (93.44%), Postives = 435/457 (95.19%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPG DDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAA EKAGSDEANGKDIPHE+TQKDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120

Query: 121 SDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKT 180
           SD+PV+ KIDTSEAKSVPKVQPVDQNSTV SESAISKVDDNLV ESNKIENEEP GGDKT
Sbjct: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180

Query: 181 GNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEKTESE 240
           GNEELVRDAEKESENDEC S +KNED  P RGDKNE+EEPSEGNEIQNKETGE EKTE+E
Sbjct: 181 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 240

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 301 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360

Query: 361 KERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSG GRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 361 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420

Query: 421 NDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASST 457
            DGK GLST GVKFKDVSIVEEFRAAVTEHK   S T
Sbjct: 421 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKVGVSIT 457

[Close]

BLAST of Cucsat.G3508 vs. ExPASy TrEMBL
Match: A0A5A7UW04 (Nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00030 PE=4 SV=1)

HSP 1 Score: 777 bits (2007), Expect = 5.46e-281
Identity = 425/451 (94.24%), Postives = 433/451 (96.01%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60
           MGDAENATSTKKRAAGRELSRDNPG DDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS
Sbjct: 29  MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 88

Query: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGSVAEV+ DTEAA EKAGSDEANGKDIPHE+TQKDGDH
Sbjct: 89  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 148

Query: 121 SDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKT 180
           SD+PV+ KIDTSEAKSVPKVQPVDQNSTV SESAISKVDDNLV ESNKIENEEP GGDKT
Sbjct: 149 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 208

Query: 181 GNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEKTESE 240
           GNEELVRDAEKESENDEC S +KNED  P RGDKNE+EEPSEGNEIQNKETGE EKTE+E
Sbjct: 209 GNEELVRDAEKESENDECVSCDKNEDEVPARGDKNENEEPSEGNEIQNKETGEQEKTENE 268

Query: 241 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 300
           ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF
Sbjct: 269 ENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSF 328

Query: 301 GLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 360
           GLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW
Sbjct: 329 GLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSW 388

Query: 361 KERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 420
           KERGKGELKVNVPTSG GRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST
Sbjct: 389 KERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDKRGITFACMNST 448

Query: 421 NDGKVGLSTLGVKFKDVSIVEEFRAAVTEHK 451
            DGK GLST GVKFKDVSIVEEFRAAVTEHK
Sbjct: 449 IDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK 479

[Close]

BLAST of Cucsat.G3508 vs. TAIR 10
Match: AT1G52380.1 (NUP50 (Nucleoporin 50 kDa) protein )

HSP 1 Score: 314.3 bits (804), Expect = 1.6e-85
Identity = 224/488 (45.90%), Postives = 295/488 (60.45%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRG 60
           MGD+EN    +KKR A ++LSRDNPGLDDD+D +E E+GTFK+AS+EVLA+RRIV+V+R 
Sbjct: 1   MGDSENVQQPSKKRGALKQLSRDNPGLDDDDDSAELESGTFKKASDEVLASRRIVRVKRK 60

Query: 61  STASAP--SSNPFAGIRLVPPTENS----GSVAEVRRDTEAAGEKAGSDEANGKDIPHEM 120
             ++AP  +SNPFAGI+LVP T  +    G+ A +     A  E    D     DI    
Sbjct: 61  EPSAAPVAASNPFAGIQLVPTTAPASTPVGTNAPLAESKLAPAEAVVEDNQKASDI---- 120

Query: 121 TQKDGDHSDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVD----DNLVSESNKI 180
             ++GD  D     K+D  +A      +  D++     +SA  +V       +VS    +
Sbjct: 121 --EEGDEVD---SKKVDVKDAVGEETEKTKDKDDNHCGKSADVQVAATEVAQMVSCDTNV 180

Query: 181 ENEEPVGGDKTGNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNK 240
            N    G D+T         EK+S                  GD+ E +E  EGN I+  
Sbjct: 181 CNNAVEGTDQTD-----FPLEKDS-----------------GGDQAEKKE-KEGNGIE-- 240

Query: 241 ETGELEKTESEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300
                             E + + +    +SFQQ SS++NAFTGLA T  S S+FSFG +
Sbjct: 241 ------------------EADKNGDNGAFSSFQQHSSNKNAFTGLASTEASGSSFSFGLV 300

Query: 301 PKD---GVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVF 360
            +D   G G    FGL ++ SS++FG +GSSI+ KSE SGFP  QEV+ ETGEENEKV F
Sbjct: 301 SQDGSTGTGSLFGFGLPSSNSSSIFGATGSSIIKKSEGSGFPPKQEVSTETGEENEKVAF 360

Query: 361 NADSILFEFIDGSWKERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTN 420
           +ADSI+FE++DG WKERGKGELKVNV +S  G+ R++MRA+GNYRLILNASLYP+MKL N
Sbjct: 361 SADSIMFEYLDGGWKERGKGELKVNV-SSNDGKARLVMRAKGNYRLILNASLYPEMKLAN 420

Query: 421 MDKRGITFACMNSTNDGKVGLSTLGVKFKDVSIVEEFRAAVTEHK--------GKASSTV 467
           MDK+GITFAC+NS ++GK GLST  +KFKD +IVEEFR A+ +HK         + S+  
Sbjct: 421 MDKKGITFACVNSVSEGKEGLSTFALKFKDPTIVEEFRVAIDKHKDSKPMEKAAEKSALP 435

[Close]

BLAST of Cucsat.G3508 vs. TAIR 10
Match: AT3G15970.1 (NUP50 (Nucleoporin 50 kDa) protein )

HSP 1 Score: 299.3 bits (765), Expect = 5.4e-81
Identity = 221/485 (45.57%), Postives = 294/485 (60.62%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGL-DDDEDVSEQETGTFKRASEEVLATRRIVKVRR 60
           MGD++NA   ++KR A +ELSRDNPGL DDDED S  E+GTF  AS+EVLA+RRI++VRR
Sbjct: 1   MGDSDNAIPFSRKRTALKELSRDNPGLDDDDEDTSALESGTFNTASKEVLASRRIIRVRR 60

Query: 61  --GSTASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQK 120
              S  + P+SNPF GIRLVP T  + S A        +   AG  E           + 
Sbjct: 61  TDRSATAPPASNPFTGIRLVPFTAPAPSTAAAETTKPLS---AGKQETLADGRSDATKET 120

Query: 121 DGDHSDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVG 180
           DGD       SK  +    +V K +      +  ++  I   +  +    N +E     G
Sbjct: 121 DGD-------SKEKSDAIDAVGKQETQGDEISAKTKDIIDGGEKEMSEAVNSVEG----G 180

Query: 181 GDKTGNEELVRDAEKESENDECASGNKNEDADPERGDKNESEEPSEGNEIQNKETGELEK 240
           G    NE    D  K +   E A+G +         D N +    EG++   K+TG   +
Sbjct: 181 GAVNKNE----DEIKTTMVTEVAAGEETVK------DDNNNSNTVEGSDCVVKDTGG-NQ 240

Query: 241 TESEENKEDKSEG-EPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDG-- 300
           TE E  + D +E  E + ++  L+SF Q SSS+NAFTGLA TGFS S+FSFG +P++G  
Sbjct: 241 TEKEGKEGDGNEDTEKNGDSGALSSFHQHSSSKNAFTGLASTGFSASSFSFGLVPQEGST 300

Query: 301 ----VGLTTSFGLSNNGSSALFGTS-GSSIVSKSEK--SGFPSMQEVAVETGEENEKVVF 360
                  + SFG +NNG+S+LFG S  +SI +KS +  + FPS Q+V+VETGEENEK  F
Sbjct: 301 GSGSEQSSFSFGQANNGNSSLFGASVATSITTKSTETTTAFPSKQDVSVETGEENEKAAF 360

Query: 361 NADSILFEFIDGSWKERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTN 420
            ADS++FE+++G WKERGKGELKVN+ T+   + R++MR++GNYRL LNASLYP+MKL  
Sbjct: 361 TADSVMFEYLEGGWKERGKGELKVNISTTENRKARLVMRSKGNYRLTLNASLYPEMKLAK 420

Query: 421 MDKRGITFACMNSTNDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASSTV-----LKT 467
           MDK+GITFAC+NS +D K GLSTL +KFKD ++VEEFRA + EHK    S       LKT
Sbjct: 421 MDKKGITFACVNSVSDAKDGLSTLALKFKDPTVVEEFRAVIEEHKDSKPSVAEAAAPLKT 460

The following BLAST results are available for this feature:

BLAST of Cucsat.G3508 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C829	2.3e-84	45.90	Nuclear pore complex protein NUP50A OS=Arabidopsis thaliana OX=3702 GN=NUP50A PE...	[more]
Q9LW88	7.7e-80	45.57	Nuclear pore complex protein NUP50B OS=Arabidopsis thaliana OX=3702 GN=NUP50B PE...	[more]
A0A0B4K7J2	1.5e-11	33.83	E3 SUMO-protein ligase RanBP2 OS=Drosophila melanogaster OX=7227 GN=Nup358 PE=1 ...	[more]

BLAST of Cucsat.G3508 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011659558.1	2.39e-313	100.00	nuclear pore complex protein NUP50A [Cucumis sativus] >KGN45347.1 hypothetical p...	[more]
XP_008462135.1	3.59e-292	94.42	PREDICTED: nuclear pore complex protein NUP50A isoform X1 [Cucumis melo] >XP_008...	[more]
TYK04047.1	1.02e-291	94.42	nuclear pore complex protein NUP50A isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008462138.1	4.21e-281	93.44	PREDICTED: nuclear pore complex protein NUP50A isoform X2 [Cucumis melo]	[more]
KAA0059280.1	1.13e-280	94.24	nuclear pore complex protein NUP50A isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G3508 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAD0	1.16e-313	100.00	RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G446650 PE=4...	[more]
A0A1S4E3Q0	1.74e-292	94.42	nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5D3BX12	4.96e-292	94.42	Nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3CHQ9	2.04e-281	93.44	nuclear pore complex protein NUP50A isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5A7UW04	5.46e-281	94.24	Nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of Cucsat.G3508 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52380.1	1.6e-85	45.90	NUP50 (Nucleoporin 50 kDa) protein	[more]
AT3G15970.1	5.4e-81	45.57	NUP50 (Nucleoporin 50 kDa) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000156	Ran binding domain	SMART	SM00160	ranbd_3	coord: 382..508 e-value: 1.1E-17 score: 74.7
IPR000156	Ran binding domain	PFAM	PF00638	Ran_BP1	coord: 393..508 e-value: 1.9E-16 score: 60.4
IPR000156	Ran binding domain	PROSITE	PS50196	RANBD1	coord: 385..514 score: 17.919996
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 376..520 e-value: 9.6E-33 score: 114.9
IPR015007	Nuclear pore complex, NUP2/50/61	PFAM	PF08911	NUP50	coord: 70..131 e-value: 8.7E-16 score: 58.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..310
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..315
None	No IPR available	PANTHER	PTHR23138:SF142	NUCLEAR PORE COMPLEX PROTEIN NUP50A-RELATED	coord: 59..524
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 59..524
None	No IPR available	CDD	cd13169	RanBD_NUP50_plant	coord: 395..512 e-value: 1.205E-62 score: 198.827
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 385..512

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G3508.T1	Cucsat.G3508.T1	mRNA
Cucsat.G3508.T3	Cucsat.G3508.T3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046907	intracellular transport
biological_process	GO:0051028	mRNA transport
biological_process	GO:0015031	protein transport
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0005096	GTPase activator activity