Cucsat.G3468 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G3468
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Unknown protein
Location	ctg1041: 5242459 .. 5246563 (+)
RNA-Seq Expression	Cucsat.G3468
Synteny	Cucsat.G3468

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AACGCTCTCTCCATTGCTTTCAAGCATTTCTCAACAGGGTAATCCCCAGCTTTCCCACATGGTTTACACCCCACAAAATGAGTCACCAATGGCCAATTTTCCCTTACCGTCTCCTCGAATTTGTCAACCAAAATCCCCCAATACCCATGAAGATTATAGGAATTCTCTAAATAGATTTTGCTTCCCCATTTCTCCCTTTGTGTTGCCAGAAGATAAACCATGGCAGATTGATCATCTGCTTCAAAGGTTGGCCTGTCTTTCAGCTCGTTCGTTAGGATTTTCCCCGCTTCATCTCGGGTTTTCCCTTTCGGCCCCATCGGAGCCCACGCGTCGAGAATGTCGAGCGACCATTGGCAGTTTCTCATCAAGAAACTCCCTGTATTTAATCCTATCCAGCTTCTTTGATCATACACCATCTCTTTCCAACCATGCATTATGAAATTGAAGTCTTTATACTTATCCCATGGGATTTCAAACGACATGTCGGTGAACATGGCGTCACTATCCATCCACCATATGAATTCTACTTCCGGATGCGAGAGAAGAAGCTTCCGTATCAATGGAAGCTTCCCCCAGAATCCCGTCATTTCCTCATCCAGAATCGCTAAGTTGTAGAAAATCTCGATTCCGTGTAACCTACAGTAATCGATTTTATTCTTAATCGATTTCAACAGGTAATGATCTCCAATGGGATTCTCACATTTCTCAGGCGAAGACCCAGTAACCAACAAAACCCTAGGCTTACCTGGGCGGATGAAATTAGGGAAACCGCGATTGTCTTTAAGCCATTTCCTCCTTCGTTCATCCCAATCGGAAACCTGGGGGGCAAGTCGGTAGGGTTTTTCCGTTCTACCGCTGAACGACTTGGTCTGATGCTCGACGAGGAGACGGTTGCGCAGGTCGGGAGTTCCGAACTGGACGGGGCCGATGGTGCCGCGGAGAACGACAACGGTGAGAAAGAGACAGAGGACAGTGAGCTTGAAATTGCGGAGAGTTCTGTGGATTCTTCTCAACCTGGGAGTTCCAAAGCAGTTTCCGATGACCGGCATTGTGGGGGGGAATTGGGAGGAGATGAATGAGAGAAGTGGAAATGGAAAGCGTAGAAGAGAAGAGAAAGCGGTGGAAAGGGGAGATCGCCATGGGTGTTGTGTTGTGCGAGTGTGAAGAACAGCTGTAAGCTTTTCTATAAGGGCGTCAGGACATTGGAGAAACAGTGAAATATTAAATTCTAACACTATACATTCATTTAAAATAATAGAAAACAAAAAACCGCTTCTAAAAAATAAATATAATTAAGAAAAGTTTGTTTGGCGTTTTATGATTGGATGGTAAATATTTGGATGTTTTTGTTATATTTATTTATGAAAATTAATTAAAAATATATAACAAATTATAGATAAATTTTGTTATATTTTATAAATATCGTCCATAATTTACTATTTTTTAAAATTAATTTTAGAAATATCTATCTATATATATCAAAATTTAATTAAATTGTGATAGATTAAATAGACATATACCAACAATAAATGTTTGTTATATATAATAAAATTTTTTGTTAGATATGTAAAACTTCTTTGATTATATTTTAAAATATGTTTGTAATTAATTTAATTTTACAAATTTTTCATATAAAATTAAGAAGAAGAAAAATCATCTTTCTAAATAGTAAATATTTACTCTATCCTATAAATTTCAAGATGTTCAATATTAGCTCAATTTATTTTCCAATTTAATTCTTACATTTTAAAATGTTAGCTGTGATTCAAGTATTGTTTTATTGATTCACTGTGTTTCATAATTTATATTTTTAATCTTAAATTTAAATTAAATAATAGTTCTCTATTTTTAAAATTTTTTTAAGTAAAAATCTAATTTTAATTGTAATTCATTTAAAACAAAAAAAGGAGTATTCATTATATGACATTTTCAAATAAAACAATTTGAAATTTAGAAACTAAACAAAATTAACTGACATAACATATGGCTTGAGTAACAAATTGAAAAAATTCATAAATTTTACCATTTCTTTACAAAATTAAAGTTTGTTATTCTTATAATCTTGTTTGTTCTATTCTCTTGTGATCATTTTTCTTTTGTTCGTATTTTTCTCTTCTTCTCCAAAAATTTTAAATATTTTTATTTGTCCTTCATTTTCATATTCTTTATTCTCCAATTTTTCCTTCTCTTCTTATCGTCATTTTATCTTCTGTAATCTTTTTTTTCCGTTTCCATCTTATTCTTTTTATTTGATAATTTTTTAAATATTTTTTTCAACTTGTTATTTGGTTCAACTGTGCCAAATATAAAGATGGTGAAAAAAATCGACAACCGTGTTCCAATTATAAACGAATGTGTCAAAAAAATATTGAAAAAAAAATCATTGAAATTTGACTACTCTAGTTAATTTAAACGATCAAATTTAAACAATCGTGTTTCAAATATAAACGATCATGTTACCAAATCTCAAAAAAAAATTGTTAAGATTTTACCACCCTAATTTAAACGATCCCATAAAATGTGTCAAATCTAAACGTAAGGATGACACCAAAAAATCTTGAAAAAATCGATTAGATTTGACATTTCTCAAACATATTACGCCCACTTGATGTCAATTAATCACGAGTTATTTTTTAAATTTTCTAATATGAGCCTGTGATTTTTTCCGTTTTCGAAATTGTCCAGCACAAAATTTTTACCAACTTGTTCTATTTTTTAAAAGACTCCCACTAAAAACAACATAATGACAAAAAAGAAAAAAAATTATAAAGTAATTTTAAATTTTCATTTCATAGTTATTTGAAAATAAGTATACATCAACGCTATTAAGTTGAAAGTAAAATATTTAGTCGAGAGTTAAAAATGTAAATTTTAAAATTTATGAACTAAACTAAAATAGATTTCAAACTTAAAGTTAAAAAATAGGAAATGTATGTGAATAAGAAATTTTGCATAATCACAAGTAGTTAGGTCGATGCATTAATTTTTTGAAACTAAGAGCCAATTAATAATTATTGTGCTTGAAATTGAAAACCGAAGACATGTAAATGACAAATAAAAGAGTCACGTGTATCTCCGATCGAACCATTTGACCACAACAATAAGCATATGACTTCAATGACGATTAAGACAGTTCAATAGTGGATAAATTCGGCTAAAGGCCTAATTGGATTGAGTCGAGTAAATAAAATCGTTAATGTCCAAAGTTCAACTCAGTTTAAATTGGAACTTTGGGCCATATACAAGAATGGGCTTAAACACAACTTTATTCGAAACTCGAATTCCATGTAATGCTAATAAGGAACCTTTATAAATAGAAGCTTTACCCCATTTTGAAATTTCGAGACTAGATTTCTAAAATTCTCAAGTTTTAAAGAGCAACAAATCCGATGCATTTTTGAAGAAAATCACCAAATAACAAGCTAAGTATCATTGAATAAGATCATTCATATTGATTAAAAGTTACTTTTCAAGAGGAAAAATGAAAAAGAACATTTAATAGTGTTTAAATTCAACAAATTACATTTCTTATAAAATCTCACTTCTAACAACCAAAATCCAGACTAAACCCAAAACTTGTGAATTATAATTATATTGTTACGAAATCTATTGATAAGATAGAAACGGTATGATTAACGACAAAATATTTTCTATTTTAAATTTGAAAATTTAAAGTTGGGCATCGAACTCGTGGACAACATATTGATTCATTTAAATTATTGAAAGAATGGAAAGGAGAAAATGAAAGACAACTATGGAAAATCTCAATTAATATACAAACTTGTTGAATTTAACCAAAGAAAAACAAAACAAATCAATCTAAACGATCTACTATTTTGGTTTGATTCTTTGTAAGTATAAAATTTGACATTTTGGTTTGTATTTGAAGAAAAGCAAAAATTACCTTTCAATTTTGTTTTGCATTGAAAAACCAAACAAAATGAAATCGATCCAAGCGTATGTGCACAAAATAATACATTTGTAATCTAGAAAAAAGCTCAACCGTACATGGACAGTATTCGCTCGAGTATAAATTTTTTTGCTTGTGTTCCACTATTTCTAGTTGTCATACTATAACATTGTAGTTTTCTTTTAGGATTTCACT

Coding sequence (CDS)

ATGATCTCCAATGGGATTCTCACATTTCTCAGGCGAAGACCCAGTAACCAACAAAACCCTAGGCTTACCTGGGCGGATGAAATTAGGGAAACCGCGATTGTCTTTAAGCCATTTCCTCCTTCGTTCATCCCAATCGGAAACCTGGGGGGCAAGTCGGTAGGGTTTTTCCGTTCTACCGCTGAACGACTTGGTCTGATGCTCGACGAGGAGACGGTTGCGCAGGTCGGGAGTTCCGAACTGGACGGGGCCGATGGTGCCGCGGAGAACGACAACGGTGAGAAAGAGACAGAGGACAGTGAGCTTGAAATTGCGGAGAGTTCTGTGGATTCTTCTCAACCTGGGAGTTCCAAAGCAGTTTCCGATGACCGGCATTGTGGGGGGGAATTGGGAGGAGATGAATGA

Protein sequence

MISNGILTFLRRRPSNQQNPRLTWADEIRETAIVFKPFPPSFIPIGNLGGKSVGFFRSTAERLGLMLDEETVAQVGSSELDGADGAAENDNGEKETEDSELEIAESSVDSSQPGSSKAVSDDRHCGGELGGDE

Homology

[Close]

BLAST of Cucsat.G3468 vs. NCBI nr
Match: KYP51021.1 (hypothetical protein KK1_027234 [Cajanus cajan])

HSP 1 Score: 70.5 bits (171), Expect = 1.61e-12
Identity = 46/124 (37.10%), Postives = 73/124 (58.87%), Query Frame = 0


Query: 1   MISNGILTFLRRRPSNQQNPRLTWADEIRETAIVFKPFPPSFIPIGNLGGKSVGFFRSTA 60
           MI NGILT  RRRPS Q++ RL  +  IRE  ++ +P    F+PI + G +++    +  
Sbjct: 1   MIPNGILTRFRRRPSYQKHTRLVGSKVIREIRVLAEPARSLFVPIRDFGAETIVEILAVC 60

Query: 61  ERLGLMLDEETVAQVGS-----SELDGADGAAENDNGEKETEDSELEIAESSVDSSQPGS 119
                +   E VA V       +EL GADGAA++++GE++ ED +L + ESS++  +P S
Sbjct: 61  FFFWFVEQYEAVADVDEVLLRRAELAGADGAAQDNDGEEQAEDRDLAMPESSLEPFRPLS 120

[Close]

BLAST of Cucsat.G3468 vs. ExPASy TrEMBL
Match: A0A151S8G0 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_027234 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 7.81e-13
Identity = 46/124 (37.10%), Postives = 73/124 (58.87%), Query Frame = 0


Query: 1   MISNGILTFLRRRPSNQQNPRLTWADEIRETAIVFKPFPPSFIPIGNLGGKSVGFFRSTA 60
           MI NGILT  RRRPS Q++ RL  +  IRE  ++ +P    F+PI + G +++    +  
Sbjct: 1   MIPNGILTRFRRRPSYQKHTRLVGSKVIREIRVLAEPARSLFVPIRDFGAETIVEILAVC 60

Query: 61  ERLGLMLDEETVAQVGS-----SELDGADGAAENDNGEKETEDSELEIAESSVDSSQPGS 119
                +   E VA V       +EL GADGAA++++GE++ ED +L + ESS++  +P S
Sbjct: 61  FFFWFVEQYEAVADVDEVLLRRAELAGADGAAQDNDGEEQAEDRDLAMPESSLEPFRPLS 120

[Close]

BLAST of Cucsat.G3468 vs. ExPASy TrEMBL
Match: A0A0A0KQR8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G242150 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.27e-07
Identity = 31/37 (83.78%), Postives = 33/37 (89.19%), Query Frame = 0


Query: 77  SSELDGADGAAENDNGEKETEDSELEIAESSVDSSQP 113
           SSEL GADGAA +D+GEKET DSELEIAES VDSSQP
Sbjct: 33  SSELAGADGAATDDDGEKETNDSELEIAESCVDSSQP 69

The following BLAST results are available for this feature:

BLAST of Cucsat.G3468 vs.


Match Name	E-value	Identity	Description

BLAST of Cucsat.G3468 vs. NCBI nr


Match Name	E-value	Identity	Description
KYP51021.1	1.61e-12	37.10	hypothetical protein KK1_027234 [Cajanus cajan]	[more]

BLAST of Cucsat.G3468 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A151S8G0	7.81e-13	37.10	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_027234 PE=4 SV=1	[more]
A0A0A0KQR8	6.27e-07	83.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G242150 PE=4 SV=1	[more]

BLAST of Cucsat.G3468 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G3468.T1	Cucsat.G3468.T1	mRNA