Cucsat.G3423 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G3423
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Protein HEADING DATE REPRESSOR 1-like isoform X2
Location	ctg1041: 6901524 .. 6906401 (+)
RNA-Seq Expression	Cucsat.G3423
Synteny	Cucsat.G3423

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCGTAGTTAGGAAATATTGGGAAGCGTGAGAATGAAAGTAAAATATATAAATATATATTCCAACGAATTAAAAATGAAAAACAAATAAAATATATAAAAATAAAAATAAAAAACAAAAGGGACCCACAGGTAGTAGATGACGACAAATATTTAGCATCAAAACATCCACCATAACGCAAAATCTGAACCGTTGGATTACAATCACGTGGTTTAGCTGTCGTTTTGTTCAGCAATTTATCTGCTTCTCTTCTCGATGAACGCACCCACAACAAACACCGAACCAAAAATCCTTTAAACCGACTCGAAATCCACAACTCCATTTCCCTCTCTCTCTCTCTCATTTTCTATATGCGAAAATTCGAATAGGATTCTTCGGAACGACTGTCTGGTGAAGCTCTTCCTCGAATTCCTTCCTCTTCAATGGAACACAATCATTCCGGCAAGATTGATAGGATTCTTGAAGGTTTTTCTCCAGCGTCGGCTCCTCGAATTCAGTGGAATTCTCGCCGGAGGTCAGGTAGTCAAAGTACTAGTCAATCAACTCTCTCTCTCTCTCTCTCTCTATGATTAATTTCTCCAGTGGAAATTGCTTCCAATTTTTTGAAACTTTGTGAAGTCGATGAAGATCAGAAACTCGAAATTTCTCTTTTCGGAAGTGAGCGAATTCGTTTAGGTTTTGAAATTATCGCATAATCTGAGACATTTCCTCACAAATTTTAGAAGAATTTCTCGCCGGAGGTCAGGTAGTCGTAGTACTAGTTAATCACTCTCTCTCTCTAGCTAATTAACTTCTCTGGTGAAACTTGCTTTCTTCAATTTTTGAAAACTTTGCGAAGTCGATGAAGATCAGAACTCGGAATTTCTCTTTTCGGAAGTTAGCGAATCTGTTTAGGTTTTGAAATTATCGCATAATCTGAGACATTTCTTCACAAATTATAGAAGAATTTCATGCCCTAACTCAAGAAATTAACCAAGCTTGTCTGTTATGATTTCTCATCCTTCCTGCTTTTGGAAATACGAAAAATGATTGAACTTCGCTCTTATGTTATGTGTTGGTTTCTTCAAGATTATGTTCATCGCTTACTCCTCCTGTGAATTTCTGTTAATCTGTTACGTTTCTCCAATAAAAATAAAAATAAAAATAAAAATAAACTTTATTTGTATATATTTTTTAAAATTGCGTAGATTTTAGGCCCCGAAGAATCGATGATAATGATTAATTAATTTAATTATATTTTGGTGTATGCATTAATGTGTTTGCCTTTTAGGCTCATTTATAAATTTATGGCTCAAAATTGGGTTAACAAAGCCAAAGCGCAAGGCCACCCGCTACCCATTACCCATCACCCATCACCCATCACCCAACCCACCGGTTGAAGTTGACTTCTCAATAGACTTTCTTTTTCTTTTGCCCACTCGTTTCGGTATATTTCACGAAAGCTCTTTATTGTCATATTACGTGGATTGTATTTTTATTTAGAAGGGAAATAATAAGCTCTTTATTAAAACGACGTCGGAGCTCGTTTTTCTTATTTATTTAATTTGTTTCTTAGGGAAAATATGCTTTTCTTTTTTTGTCAATATTATTGATTTTGTTTTATTCATAATTCAGCATGCCTTACACGTTACGAGCTTTATTATTATTATTATTATTATGTATAATAACGTTACGTGCTTTACTATGTTTTCACTTTTTTTTTTTTGAAGAATTTTCATGTTAATTAGAGATTGTTCTTTGTATTGAAAATCATCTTTTAGTTTCCAAAATAATAATAATAATAATTATTATTATTATGATAATTAAAAAATCATCTTTTAGTTTTTATAACTTCAAATGTATTTAAAATAAAGACAAATTGCAAAAAAAAAAACACAACTGGAAGTATGATTGTAATTATAAATAGATCCACAAAATTTTAATGGTAGAAAGTGCCCTCAATTAATTCATATAGAATTGAAACGGTCTAATTGGGTAAGTTCTTAGTTCGTGAGATCAAATTGAAATTTTTAACTGTAATTGTCGTGATACTTAAGGGATGGTTTTGAATTTCGGGAAAATTACCCTTTGTTTTCAGGTTTGAACCATGTCTCTAACTATTTGATGTCACTCATGTTTTTTCTTTTGAATATCATTTATATTTGGAAGATTCGAGTCTTTTAACTTTTTTGTCAAATGTATATATTTTATATGAAGTCAAAAATATATACTTTGTGATTAGTTGAGTTGTGTCGATGTCGTATATTTAGATTTTAATATCATTTTGATCCATGTACTTTGAGTTTGTTCTCTTTTACAAATTTTGTCTATTAGCATTGTATCTTTTAAGTCTTGGATACAAGTTTAACCTCATTTGTTTTTTATTCCTGATTAATTTCTGAATAAAAGATAGAAGACATTTTGAAATTGGGTTTGTGAGCCGATGGTTATTTTCAAATATTATATTTTCCAACCAAATGGATTAAGAAACTTTTGTAGTAATGAGAAACTGATACCAAACCAACATGTCACTTCACAAAATTATACATCAAAACAATTTTCCTTTTGTATCTTTTCAACTAATAGAGATTTTCCCCCTTTTAAGACACAATATCTAGTTGTCTAATTTAATCTGGTTGCCTTTTTTTCCCCTCTTTCTTCACTTTTAAAATTTTAATTTTCACTCTACAAATTAAAAGTGATAATTCAACCTTTATCAGGAATTAATTAAAGGGTTGGCCATTGAGATGCTCCATAATCTATTCCATAAATAGTGAATCTATAAAGGTTAAAAGATTTTAAGTTACAATCTCTTTGGACATAGGATCCCTATTCCTTACTTAGATGCTTTTCTCATATGTCAAGTTTGGTATTCAAATGATGGGACTTAACGCCCACTATATCATATATTGGTTTCAGTATTCTTATAAGGCCCACATTCAGTTATTAATCATTGAAATTTTCTTGTTGTCTTCTTCTTGAAAATCAAGATTTGGTGTTTTGGGATCAATTATTTAACGTTTCCACCCCATCTTTGATTTTCATTTCATTTCATTTCTCATCATAATGTAAATTTGATGATTTTTTATATTTGAAGAATTGCATGCCTGTGACTTTATCTTGGAGTTGGCTTACTGTTCTCCTTTTTACCTCTTGTTGTTGCTTGGAGACACACTCTCTCTCTCTCTCTCTCTCAGTCACTCACTCTAAAGCTAATATCATTATTGAATCTTTGCTTTCAATATAATTTTCCCTTTTCTGATTGATGGATAGTTTGTTCTCATATTTTTCACAATTGGGTTATATTGAATTCTGTTAGGGGCTGTTTGGGCTGGTACTATTCGGAATCAGGAACTCTGAGGTTGTTTTAGCATTAGCTTTTTTTCTATTCAACTTACCCATAAGTAAACATGACCCCAACTCGTACACGTACTTTTATAACCTATTTGATGTTTCTACGAATTTTAACTAGACAATAAATTGAATGCTTGGAACTCTATTAGAGATAAATTTCAAATTTATATTTAGAAGAACCATTAGCGTTATAAAAAATTGAACGTGTCAAACTTTATTAGACAAAAGTTTAATTAAATCTAAAGACTCGTTAGGTTGTTTTTAGGTTAAAAAACTTGTTAGATTCAAAATTTAAGGTCTAAATATTAATTATTAGAGACCAAATAGAATATATTTCGAAGTTTAGGGGATAAATTTTGTTATACAACTTTGATATAGTATAAAATCTATAGCAGAATCTGTGTGCCTAGCAATGCTAGCTGATATAATTTAGGGACCTCAATAATTTTTATTTATTGGACTTTTCTTTATTTGTTGGTCCTCTAAATTGTTTGGAACTAGAATGGTATCTTCTTTCCAACAGCTAGCGGGAGGAATTTAGACAAGGAAACTGAAGATCAGGATTCTGCTAATAAAACTTGCGACAAACAGGAAGTATCTCCGGGCAATGATAACATATCTCAGGACACTGACATGGTTCTCCCTGAGCTCTCGGAGCGTCGAAAGGCTCTGTTTGAGCCCTTAGAACCCGTGAGAAACATCAATGGCCGAAGACCATCAGCTGAATCCTTACTCCCTCCTCCCGATTTTGACGAAACCACTTATCCCCGAGGGTGGCTCATCGGGAAGAAGCGGAAACTTGTCAATGTCGACGTTGTCGAGAGCATGCGGAGGATTGCTGTTCAGGAAATGAATAGAAAGGTTGTGTAATAACTAATTAATTTCATTGTTTACGTAAAAATGTGGCCTCGTTAATTTTTTCAACTGAAAGGCAGTTGGGTTGTGTCGTATAGGACCGAGAAATCAATGGTTTAAACGAGCAGCTCGATGAGGATGCTCGGTGCTTGGAACATCTTCAAATTCAGCTTCTGCAAGAAAAGAGCAAAAGATCAGAAGTTGAAAGGGAGAATGCAATGCTGCATGATCAAATAAACATGCTAATGAGCATGCTAGACAATGAAGGAGCAGATGATGGCTCAGATGAACCTTAAAATAATATATCCCATCATATATTTATACTTAATTTGTTTGTTTTATATTCTTTTTGTAGATTATTTCATGTGGGGGGTAGATAAAAAAAAAGTTTCAATTAAATTATATATCCATGAATATACATGCATCCTAGTATTATATTGTCATTATATTGGGATGAAAAAAAAAAAAAAAGTTAATTAGTGGGAGTATTAGATATGAATTTAAAATATGAACTCTAAATCTCAACTGGATTTTCCAGTTGAATTATGTGGTTGATTTTCTCAGTTTTATTTTTTATTTTTTTTTTCCTTTTTTTGTGTATTTGATTTTACATCTTCAATTTTATGTATTTTTGTAAAATGTAAATAATAAAGTGAGGTTACGAAGAAGGAAGCTATTAACTGTATTACT

Coding sequence (CDS)

ATGGTTCTCCCTGAGCTCTCGGAGCGTCGAAAGGCTCTGTTTGAGCCCTTAGAACCCGTGAGAAACATCAATGGCCGAAGACCATCAGCTGAATCCTTACTCCCTCCTCCCGATTTTGACGAAACCACTTATCCCCGAGGGTGGCTCATCGGGAAGAAGCGGAAACTTGTCAATGTCGACGTTGTCGAGAGCATGCGGAGGATTGCTGTTCAGGAAATGAATAGAAAGGACCGAGAAATCAATGGTTTAAACGAGCAGCTCGATGAGGATGCTCGGTGCTTGGAACATCTTCAAATTCAGCTTCTGCAAGAAAAGAGCAAAAGATCAGAAGTTGAAAGGGAGAATGCAATGCTGCATGATCAAATAAACATGCTAATGAGCATGCTAGACAATGAAGGAGCAGATGATGGCTCAGATGAACCTTAA

Protein sequence

MVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDNEGADDGSDEP

Homology

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BLAST of Cucsat.G3423 vs. ExPASy Swiss-Prot
Match: B8AE37 (Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. indica OX=39946 GN=HDR1 PE=3 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 5.2e-48
Identity = 98/137 (71.53%), Postives = 118/137 (86.13%), Query Frame = 0


Query: 6   LSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESM 65
           LSE+RKALFEPLEP   ING+R SAE LLPPPDF+  +YP+GWL+GKKRKLVNVDVVESM
Sbjct: 72  LSEKRKALFEPLEP---INGKRSSAEMLLPPPDFEPASYPKGWLVGKKRKLVNVDVVESM 131

Query: 66  RRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINML 125
           RRIA+QEMNRKDREINGLNEQL+ED+R LE LQ QL  E+ KR+E+E+EN+MLH+Q++ML
Sbjct: 132 RRIAIQEMNRKDREINGLNEQLEEDSRVLELLQKQLADERKKRTEIEKENSMLHEQVSML 191

Query: 126 MSMLD-NEGADDGSDEP 142
           M+MLD NE  D+  + P
Sbjct: 192 MNMLDENEAFDEEGEAP 205

[Close]

BLAST of Cucsat.G3423 vs. ExPASy Swiss-Prot
Match: Q6K678 (Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HDR1 PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 5.2e-48
Identity = 98/137 (71.53%), Postives = 118/137 (86.13%), Query Frame = 0


Query: 6   LSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESM 65
           LSE+RKALFEPLEP   ING+R SAE LLPPPDF+  +YP+GWL+GKKRKLVNVDVVESM
Sbjct: 72  LSEKRKALFEPLEP---INGKRSSAEMLLPPPDFEPASYPKGWLVGKKRKLVNVDVVESM 131

Query: 66  RRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINML 125
           RRIA+QEMNRKDREINGLNEQL+ED+R LE LQ QL  E+ KR+E+E+EN+MLH+Q++ML
Sbjct: 132 RRIAIQEMNRKDREINGLNEQLEEDSRVLELLQKQLADERKKRTEIEKENSMLHEQVSML 191

Query: 126 MSMLD-NEGADDGSDEP 142
           M+MLD NE  D+  + P
Sbjct: 192 MNMLDENEAFDEEGEAP 205

[Close]

BLAST of Cucsat.G3423 vs. NCBI nr
Match: XP_004135890.1 (protein HEADING DATE REPRESSOR 1 isoform X2 [Cucumis sativus])

HSP 1 Score: 276 bits (707), Expect = 1.39e-92
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVD 60
           MVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVD
Sbjct: 70  MVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVD 129

Query: 61  VVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHD 120
           VVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHD
Sbjct: 130 VVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHD 189

Query: 121 QINMLMSMLDNEGADDGSDEP 141
           QINMLMSMLDNEGADDGSDEP
Sbjct: 190 QINMLMSMLDNEGADDGSDEP 210

[Close]

BLAST of Cucsat.G3423 vs. NCBI nr
Match: XP_011659486.1 (protein HEADING DATE REPRESSOR 1 isoform X1 [Cucumis sativus] >KGN45198.1 hypothetical protein Csa_016317 [Cucumis sativus])

HSP 1 Score: 276 bits (707), Expect = 1.54e-92
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVD 60
           MVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVD
Sbjct: 73  MVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVD 132

Query: 61  VVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHD 120
           VVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHD
Sbjct: 133 VVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHD 192

Query: 121 QINMLMSMLDNEGADDGSDEP 141
           QINMLMSMLDNEGADDGSDEP
Sbjct: 193 QINMLMSMLDNEGADDGSDEP 213

[Close]

BLAST of Cucsat.G3423 vs. NCBI nr
Match: XP_008461210.1 (PREDICTED: uncharacterized protein LOC103499861 [Cucumis melo] >KAA0058690.1 protein HEADING DATE REPRESSOR 1-like isoform X2 [Cucumis melo var. makuwa] >TYK10496.1 protein HEADING DATE REPRESSOR 1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 263 bits (673), Expect = 4.54e-87
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 2   VLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVDV 61
           V PELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVDV
Sbjct: 95  VPPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVDV 154

Query: 62  VESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQ 121
           VESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQ
Sbjct: 155 VESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQ 214

Query: 122 INMLMSMLDNEGADDGSDEP 141
           INMLMSMLDNEGAD GSDEP
Sbjct: 215 INMLMSMLDNEGAD-GSDEP 233

[Close]

BLAST of Cucsat.G3423 vs. NCBI nr
Match: XP_038897908.1 (protein HEADING DATE REPRESSOR 1 [Benincasa hispida])

HSP 1 Score: 263 bits (671), Expect = 1.90e-86
Identity = 135/140 (96.43%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 2   VLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVDV 61
           VLPELSERRKALFEPLEPV+NINGRRPSAESLLPPPDFD+T YPRGWLIGKKRKLVNVDV
Sbjct: 117 VLPELSERRKALFEPLEPVKNINGRRPSAESLLPPPDFDDTIYPRGWLIGKKRKLVNVDV 176

Query: 62  VESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQ 121
           VESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQ+QLLQEKSKRSEVERENAMLHDQ
Sbjct: 177 VESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQLQLLQEKSKRSEVERENAMLHDQ 236

Query: 122 INMLMSMLDNEGADDGSDEP 141
           INMLMSMLDNEGAD GSDEP
Sbjct: 237 INMLMSMLDNEGAD-GSDEP 255

[Close]

BLAST of Cucsat.G3423 vs. NCBI nr
Match: XP_022148239.1 (protein HEADING DATE REPRESSOR 1 [Momordica charantia])

HSP 1 Score: 253 bits (645), Expect = 3.85e-83
Identity = 129/141 (91.49%), Postives = 137/141 (97.16%), Query Frame = 0


Query: 1   MVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVD 60
           +V PELSERR+ALFEPLEPV+NINGRRPSAESLLPPPDFD T YPRGWLIGKKRKLVNVD
Sbjct: 71  VVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKLVNVD 130

Query: 61  VVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHD 120
           VVESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQ+QL+QEKSKRSEVERENAMLHD
Sbjct: 131 VVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVQEKSKRSEVERENAMLHD 190

Query: 121 QINMLMSMLDNEGADDGSDEP 141
           QINMLM+ML+NEGAD GSDEP
Sbjct: 191 QINMLMNMLENEGAD-GSDEP 210

[Close]

BLAST of Cucsat.G3423 vs. ExPASy TrEMBL
Match: A0A0A0K6R3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430820 PE=4 SV=1)

HSP 1 Score: 276 bits (707), Expect = 7.47e-93
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVD 60
           MVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVD
Sbjct: 73  MVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVD 132

Query: 61  VVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHD 120
           VVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHD
Sbjct: 133 VVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHD 192

Query: 121 QINMLMSMLDNEGADDGSDEP 141
           QINMLMSMLDNEGADDGSDEP
Sbjct: 193 QINMLMSMLDNEGADDGSDEP 213

[Close]

BLAST of Cucsat.G3423 vs. ExPASy TrEMBL
Match: A0A5A7UUH2 (Protein HEADING DATE REPRESSOR 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001460 PE=4 SV=1)

HSP 1 Score: 263 bits (673), Expect = 2.20e-87
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 2   VLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVDV 61
           V PELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVDV
Sbjct: 95  VPPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVDV 154

Query: 62  VESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQ 121
           VESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQ
Sbjct: 155 VESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQ 214

Query: 122 INMLMSMLDNEGADDGSDEP 141
           INMLMSMLDNEGAD GSDEP
Sbjct: 215 INMLMSMLDNEGAD-GSDEP 233

[Close]

BLAST of Cucsat.G3423 vs. ExPASy TrEMBL
Match: A0A1S3CE60 (uncharacterized protein LOC103499861 OS=Cucumis melo OX=3656 GN=LOC103499861 PE=4 SV=1)

HSP 1 Score: 263 bits (673), Expect = 2.20e-87
Identity = 137/140 (97.86%), Postives = 138/140 (98.57%), Query Frame = 0


Query: 2   VLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVDV 61
           V PELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVDV
Sbjct: 95  VPPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVDV 154

Query: 62  VESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQ 121
           VESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQ
Sbjct: 155 VESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQ 214

Query: 122 INMLMSMLDNEGADDGSDEP 141
           INMLMSMLDNEGAD GSDEP
Sbjct: 215 INMLMSMLDNEGAD-GSDEP 233

[Close]

BLAST of Cucsat.G3423 vs. ExPASy TrEMBL
Match: A0A6J1D3E7 (protein HEADING DATE REPRESSOR 1 OS=Momordica charantia OX=3673 GN=LOC111016948 PE=4 SV=1)

HSP 1 Score: 253 bits (645), Expect = 1.86e-83
Identity = 129/141 (91.49%), Postives = 137/141 (97.16%), Query Frame = 0


Query: 1   MVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVD 60
           +V PELSERR+ALFEPLEPV+NINGRRPSAESLLPPPDFD T YPRGWLIGKKRKLVNVD
Sbjct: 71  VVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKLVNVD 130

Query: 61  VVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHD 120
           VVESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQ+QL+QEKSKRSEVERENAMLHD
Sbjct: 131 VVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVQEKSKRSEVERENAMLHD 190

Query: 121 QINMLMSMLDNEGADDGSDEP 141
           QINMLM+ML+NEGAD GSDEP
Sbjct: 191 QINMLMNMLENEGAD-GSDEP 210

[Close]

BLAST of Cucsat.G3423 vs. ExPASy TrEMBL
Match: A0A6J1H766 (protein HEADING DATE REPRESSOR 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111460721 PE=4 SV=1)

HSP 1 Score: 248 bits (633), Expect = 7.84e-82
Identity = 125/140 (89.29%), Postives = 135/140 (96.43%), Query Frame = 0


Query: 2   VLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVDV 61
           + P+LS+RRKALFEPLE ++NINGRRPSAESLLPPPDFD T YPRGWLIGKKRKLVNVDV
Sbjct: 58  LFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKLVNVDV 117

Query: 62  VESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQ 121
           VESMRRIA+QEMNRKDREI+GLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQ
Sbjct: 118 VESMRRIAIQEMNRKDREIDGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQ 177

Query: 122 INMLMSMLDNEGADDGSDEP 141
           ++MLMSML+NEGAD GSDEP
Sbjct: 178 VSMLMSMLENEGAD-GSDEP 196

[Close]

BLAST of Cucsat.G3423 vs. TAIR 10
Match: AT1G80940.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 207.6 bits (527), Expect = 6.5e-54
Identity = 102/139 (73.38%), Postives = 127/139 (91.37%), Query Frame = 0


Query: 4   PELSERRKALFEPLEPVRNINGRRP-SAESLLPPPDFDETTYPRGWLIGKKRKLVNVDVV 63
           P LSE+RKALFEPLEP+ N+NG+RP +A+SLLPPPDF+   YP+GWLIGKKRKLVNVDVV
Sbjct: 76  PLLSEKRKALFEPLEPITNLNGKRPTAADSLLPPPDFETANYPKGWLIGKKRKLVNVDVV 135

Query: 64  ESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQI 123
           ESMRRIAVQEMNRKDREI+GLNEQL+ED+RCLEHLQ+QLLQE+SKR+E+EREN ML +Q+
Sbjct: 136 ESMRRIAVQEMNRKDREIDGLNEQLEEDSRCLEHLQLQLLQERSKRTEIERENTMLKEQV 195

Query: 124 NMLMSMLDNEGADDGSDEP 142
           +ML++M+  E  ++G++EP
Sbjct: 196 DMLVNMI-QEDDEEGAEEP 213

[Close]

BLAST of Cucsat.G3423 vs. TAIR 10
Match: AT1G80940.2 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 125.2 bits (313), Expect = 4.3e-29
Identity = 60/77 (77.92%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 4   PELSERRKALFEPLEPVRNINGRRP-SAESLLPPPDFDETTYPRGWLIGKKRKLVNVDVV 63
           P LSE+RKALFEPLEP+ N+NG+RP +A+SLLPPPDF+   YP+GWLIGKKRKLVNVDVV
Sbjct: 76  PLLSEKRKALFEPLEPITNLNGKRPTAADSLLPPPDFETANYPKGWLIGKKRKLVNVDVV 135

Query: 64  ESMRRIAVQEMNRKDRE 80
           ESMRRIAVQEMNRK ++
Sbjct: 136 ESMRRIAVQEMNRKVKQ 152

The following BLAST results are available for this feature:

BLAST of Cucsat.G3423 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B8AE37	5.2e-48	71.53	Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. indica OX=39946 GN=HDR1 ...	[more]
Q6K678	5.2e-48	71.53	Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HDR...	[more]

BLAST of Cucsat.G3423 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135890.1	1.39e-92	100.00	protein HEADING DATE REPRESSOR 1 isoform X2 [Cucumis sativus]	[more]
XP_011659486.1	1.54e-92	100.00	protein HEADING DATE REPRESSOR 1 isoform X1 [Cucumis sativus] >KGN45198.1 hypoth...	[more]
XP_008461210.1	4.54e-87	97.86	PREDICTED: uncharacterized protein LOC103499861 [Cucumis melo] >KAA0058690.1 pro...	[more]
XP_038897908.1	1.90e-86	96.43	protein HEADING DATE REPRESSOR 1 [Benincasa hispida]	[more]
XP_022148239.1	3.85e-83	91.49	protein HEADING DATE REPRESSOR 1 [Momordica charantia]	[more]

BLAST of Cucsat.G3423 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6R3	7.47e-93	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430820 PE=4 SV=1	[more]
A0A5A7UUH2	2.20e-87	97.86	Protein HEADING DATE REPRESSOR 1-like isoform X2 OS=Cucumis melo var. makuwa OX=...	[more]
A0A1S3CE60	2.20e-87	97.86	uncharacterized protein LOC103499861 OS=Cucumis melo OX=3656 GN=LOC103499861 PE=...	[more]
A0A6J1D3E7	1.86e-83	91.49	protein HEADING DATE REPRESSOR 1 OS=Momordica charantia OX=3673 GN=LOC111016948 ...	[more]
A0A6J1H766	7.84e-82	89.29	protein HEADING DATE REPRESSOR 1-like isoform X1 OS=Cucurbita moschata OX=3662 G...	[more]

BLAST of Cucsat.G3423 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80940.1	6.5e-54	73.38	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT1G80940.2	4.3e-29	77.92	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 66..86
None	No IPR available	COILS	Coil	Coil	coord: 94..114
None	No IPR available	PANTHER	PTHR37205:SF1	F23A5.30 PROTEIN	coord: 4..137
IPR038864	Protein heading date repressor 1	PANTHER	PTHR37205	F23A5.30 PROTEIN	coord: 4..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G3423.T1	Cucsat.G3423.T1	mRNA
Cucsat.G3423.T4	Cucsat.G3423.T4	mRNA
Cucsat.G3423.T2	Cucsat.G3423.T2	mRNA
Cucsat.G3423.T6	Cucsat.G3423.T6	mRNA
Cucsat.G3423.T3	Cucsat.G3423.T3	mRNA
Cucsat.G3423.T5	Cucsat.G3423.T5	mRNA
Cucsat.G3423.T7	Cucsat.G3423.T7	mRNA
Cucsat.G3423.T9	Cucsat.G3423.T9	mRNA
Cucsat.G3423.T8	Cucsat.G3423.T8	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009909	regulation of flower development