Cucsat.G3344 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G3344
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	two-component response regulator ARR11-like
Location	ctg1041: 5593760 .. 5595089 (+)
RNA-Seq Expression	Cucsat.G3344
Synteny	Cucsat.G3344

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAAAACTCCACAACAGAAGTTTTGAAAAATATTATCTCTCTCTCTTTTCTTTTTTCATGAATATATTTTTCTTTCTTTATTATTTTATCCCTACCGAGAGGGGTTAGGGTTATTCTTTTAACTCTCATGGCTTTCTCCGGTGATTATTAACACTCTCCAACTTCACTTCTTTCTACTTCCATCCATTTCTGTTACTTCCTCATTTCAACCTTCATTCAATTACTTCCAACACTCAACAACACATTGACTTCAATCTATCTAAAGATTTTGTTTATTAGTAATTTATCTCAAAGATTGAAAATCAATTTGATTATCTTCTTTTTTTTCTTAATGAAGAGATATTGACTCCAAGATCCAACCGTGGAAAAGAAATAATGGAAGACGACCCTGGATTTTGTGGTGTGAATTGTTCTTGTGATTATCTTGTTCAATATCCCGATCATCAGCCTTTGCATTTAGTTCCACACCATGTTGGCTGCTCTTCACACCCTGTTGTTACCTCCTCTTCAAACCCTGTTGTTGGATCCTCTTCAAACCATATTGTTGGCTCCTCTTCAAATCCTGTTGTTGGATCTTCTTCAAATCATATTGTTGACTCCTCTTCAAATCCTGTTGTTGGATCCTCTTCAAACCATGTTGTTGGCTCCTCTTCAAACCCTGTTGTTGACTCCTCTTCGTCCGGAATCGACGTCAATGGTCGTCGAGTTGGAAGAAAAGGTTCTTCAAAACCTAAAGCTTCAAAGAAGAAAAATGGTTACCATCATGTTCAAGGAGTGAGGAGACAACGACTCATTTGGACTACAGAACTCCATCAGTGTTTTGTTGAGATTTTTAATCGTACACCTTGCACACGTAAGCTTTGTTCATCTTATACATATCCATTATTAGAAAAAAAGAAAAAACTAACTTTTGGTAATTGTATCCTAGAACTTTATCCTAGGATAATCTTGGAGCAGATGTCAGAAAAATACCCCTTTGTCACTAGGGAAAATATTGCTAGCCACCTCCAGGTATAACTTTTAAGTTTTGTAATGTAAGTTGATTTTTTACAATCTTTTATCTAAAATATATTTTGGTGTTGATGGAAATGTAGAAGCATAAAACGAATCTCATTAAGATGAAGGACAAGGAGAACTCAGCAAAAGCCTCTTCCAAATCAGTGCCTCTCAAGATTCCCAAAGAATCTAACTCCCAATCAATTCACCCTAAAACTTCCAATTCCAACTCCACAATTCCTAATTCTCAGCTTATTCTTCAAAGCCATCCCAATCCCACAAACCCTATTTCTTCCCAAGTTCTTGTCCAAAGCCATCCCAATTCCACAAACCCTATTTCTTCCCAAGTTCTTCTCCAAAGCCATCCCAATTCCACAAACCCTATTTCTTCCCAAGTTCTTCTCCAAAG

Coding sequence (CDS)

ATGGAAGACGACCCTGGATTTTGTGGTGTGAATTGTTCTTGTGATTATCTTGTTCAATATCCCGATCATCAGCCTTTGCATTTAGTTCCACACCATGTTGGCTGCTCTTCACACCCTGTTGTTACCTCCTCTTCAAACCCTGTTGTTGGATCCTCTTCAAACCATATTGTTGGCTCCTCTTCAAATCCTGTTGTTGGATCTTCTTCAAATCATATTGTTGACTCCTCTTCAAATCCTGTTGTTGGATCCTCTTCAAACCATGTTGTTGGCTCCTCTTCAAACCCTGTTGTTGACTCCTCTTCGTCCGGAATCGACGTCAATGGTCGTCGAGTTGGAAGAAAAGGTTCTTCAAAACCTAAAGCTTCAAAGAAGAAAAATGGTTACCATCATGTTCAAGGAGTGAGGAGACAACGACTCATTTGGACTACAGAACTCCATCAGTGTTTTGTTGAGATTTTTAATCGTACACCTTGCACACAACTTTATCCTAGGATAATCTTGGAGCAGATGTCAGAAAAATACCCCTTTGTCACTAGGGAAAATATTGCTAGCCACCTCCAGAAGCATAAAACGAATCTCATTAAGATGAAGGACAAGGAGAACTCAGCAAAAGCCTCTTCCAAATCAGTGCCTCTCAAGATTCCCAAAGAATCTAACTCCCAATCAATTCACCCTAAAACTTCCAATTCCAACTCCACAATTCCTAATTCTCAGCTTATTCTTCAAAGCCATCCCAATCCCACAAACCCTATTTCTTCCCAAGTTCTTGTCCAAAGCCATCCCAATTCCACAAACCCTATTTCTTCCCAAGTTCTTCTCCAAAGCCATCCCAATTCCACAAACCCTATTTCTTCCCAAGTTCTTCTCCAA

Protein sequence

MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSSSNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPKASKKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCTQLYPRIILEQMSEKYPFVTRENIASHLQKHKTNLIKMKDKENSAKASSKSVPLKIPKESNSQSIHPKTSNSNSTIPNSQLILQSHPNPTNPISSQVLVQSHPNSTNPISSQVLLQSHPNSTNPISSQVLLQ

Homology

[Close]

BLAST of Cucsat.G3344 vs. ExPASy Swiss-Prot
Match: Q940D0 (Two-component response regulator ARR1 OS=Arabidopsis thaliana OX=3702 GN=ARR1 PE=1 SV=2)

HSP 1 Score: 52.0 bits (123), Expect = 1.5e-05
Identity = 35/116 (30.17%), Postives = 57/116 (49.14%), Query Frame = 0


Query: 124 GSSSNPVVDSSSSGIDVNGRRVGRKGSSKPKASKKKNGYHHVQG---------VRRQRLI 183
           G      V      +D N   V    + +  + K+K+     QG         +++ R++
Sbjct: 182 GGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDASNLKKPRVV 241

Query: 184 WTTELHQCFVEIFNRTPCTQLYPRIILEQMSEKYPFVTRENIASHLQKHKTNLIKM 231
           W+ ELHQ FV   N+    +  P+ ILE M+   P +TREN+ASHLQK++  L ++
Sbjct: 242 WSVELHQQFVAAVNQLGVEKAVPKKILELMN--VPGLTRENVASHLQKYRIYLRRL 295

[Close]

BLAST of Cucsat.G3344 vs. ExPASy Swiss-Prot
Match: Q9ZWJ9 (Two-component response regulator ARR2 OS=Arabidopsis thaliana OX=3702 GN=ARR2 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.5e-05
Identity = 32/99 (32.32%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 132 DSSSSGIDVNGRRVGRKGSSKPKASKKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTP 191
           D++SS ++    R  RK   + +   + +       +++ R++W+ ELHQ FV   N+  
Sbjct: 179 DNNSSSVNEGNGRSSRK-RKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLG 238

Query: 192 CTQLYPRIILEQMSEKYPFVTRENIASHLQKHKTNLIKM 231
             +  P+ ILE M+   P +TREN+ASHLQK++  L ++
Sbjct: 239 VDKAVPKKILEMMN--VPGLTRENVASHLQKYRIYLRRL 274

[Close]

BLAST of Cucsat.G3344 vs. ExPASy Swiss-Prot
Match: Q9SNB4 (Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 1.3e-04
Identity = 49/152 (32.24%), Postives = 77/152 (50.66%), Query Frame = 0


Query: 92  GSSSNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSS 151
           G SS P   SS+N++ +      VGSSS    GS S     S+  G D      G    S
Sbjct: 74  GGSSGPNTSSSNNNVEEEDR---VGSSS---PGSDSKKQKTSNGDGDDGG----GVDPDS 133

Query: 152 KPKASKKKNGYHHVQG--VRRQRLIWTTELHQCFVEIFNRTPCTQLYPRIILEQMSEKYP 211
              A +  +G   + G  ++R RL+WT +LH+ FV++          P+ I++ M+ +  
Sbjct: 134 AMAAEEGDSGTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVE-- 193

Query: 212 FVTRENIASHLQKHKTNLIKMKDKENSAKASS 242
            +TREN+ASHLQK++  L +M+   N   ++S
Sbjct: 194 GLTRENVASHLQKYRLYLKRMQGLTNEGPSAS 213

[Close]

BLAST of Cucsat.G3344 vs. ExPASy Swiss-Prot
Match: Q8L9Y3 (Two-component response regulator ARR14 OS=Arabidopsis thaliana OX=3702 GN=ARR14 PE=1 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 2.8e-04
Identity = 31/94 (32.98%), Postives = 54/94 (57.45%), Query Frame = 0


Query: 169 RRQRLIWTTELHQCFVEIFNRTPCTQLYPRIILEQMSEKYPFVTRENIASHLQKHKTNLI 228
           ++ R++W+ ELHQ FV   N+    +  P+ ILE M+   P ++REN+ASHLQK +  L 
Sbjct: 199 KKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMN--VPGLSRENVASHLQKFRLYLK 258

Query: 229 KMKDKENSAKASSKSVPLK-IPKESNSQSIHPKT 262
           ++  + + +  S  +   + I    +S  +HP+T
Sbjct: 259 RLSGEASQSNDSESTKRYENIQALVSSGQLHPQT 290

[Close]

BLAST of Cucsat.G3344 vs. NCBI nr
Match: XP_031745104.1 (probable serine/threonine-protein kinase cdc7 [Cucumis sativus])

HSP 1 Score: 458 bits (1179), Expect = 2.02e-156
Identity = 254/290 (87.59%), Postives = 254/290 (87.59%), Query Frame = 0


Query: 35  MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSS 94
           MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSS
Sbjct: 1   MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSS 60

Query: 95  SNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPK 154
           SNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPK
Sbjct: 61  SNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPK 120

Query: 155 ASKKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCTQLYPRIILEQMSEKYPFVTRE 214
           ASKKKNGYHHVQG                                    MSEKYPFVTRE
Sbjct: 121 ASKKKNGYHHVQG------------------------------------MSEKYPFVTRE 180

Query: 215 NIASHLQKHKTNLIKMKDKENSAKASSKSVPLKIPKESNSQSIHPKTSNSNSTIPNSQLI 274
           NIASHLQKHKTNLIKMKDKENSAKASSKSVPLKIPKESNSQSIHPKTSNSNSTIPNSQLI
Sbjct: 181 NIASHLQKHKTNLIKMKDKENSAKASSKSVPLKIPKESNSQSIHPKTSNSNSTIPNSQLI 240

Query: 275 LQSHPNPTNPISSQVLVQSHPNSTNPISSQVLLQSHPNSTNPISSQVLLQ 324
           LQSHPNPTNPISSQVLVQSHPNSTNPISSQVLLQSHPNSTNPISSQVLLQ
Sbjct: 241 LQSHPNPTNPISSQVLVQSHPNSTNPISSQVLLQSHPNSTNPISSQVLLQ 254

[Close]

BLAST of Cucsat.G3344 vs. NCBI nr
Match: KAE8646357.1 (hypothetical protein Csa_015615, partial [Cucumis sativus])

HSP 1 Score: 315 bits (808), Expect = 1.17e-105
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 35  MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSS 94
           MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSS
Sbjct: 1   MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSS 60

Query: 95  SNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPK 154
           SNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPK
Sbjct: 61  SNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPK 120

Query: 155 ASKKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCT 193
           ASKKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCT
Sbjct: 121 ASKKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCT 159

[Close]

BLAST of Cucsat.G3344 vs. NCBI nr
Match: KAA0046669.1 (hypothetical protein E6C27_scaffold427G00360 [Cucumis melo var. makuwa] >TYK18204.1 hypothetical protein E5676_scaffold411G001430 [Cucumis melo var. makuwa])

HSP 1 Score: 289 bits (739), Expect = 4.20e-91
Identity = 166/264 (62.88%), Postives = 181/264 (68.56%), Query Frame = 0


Query: 37  DDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSSSN 96
           +D GF GVN SCDYLVQ PDHQPL LVP+HVGCSSH V                      
Sbjct: 2   EDTGFSGVNGSCDYLVQSPDHQPLQLVPYHVGCSSHSV---------------------- 61

Query: 97  PVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPKAS 156
                                                SSSGI+++ RRVGRK SSKPKAS
Sbjct: 62  -----------------------------------GCSSSGINLDRRRVGRKSSSKPKAS 121

Query: 157 KKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCTQLYPRIILEQMSEKYPFVTRENI 216
           KKKNGYH  QG ++QRLIWT ELHQCFV+IFNRTP T+L+PR ILEQMS KYPFVTRENI
Sbjct: 122 KKKNGYHQPQGEKKQRLIWTPELHQCFVDIFNRTPSTKLFPRTILEQMSGKYPFVTRENI 181

Query: 217 ASHLQKHKTNLIKMKDKENSAKASSKSVPLKIPKESNSQSIHPKTSNSNSTIPNSQLILQ 276
           ASHLQKHK NL K  ++ENSAKASSKSVPLKIPKESNSQSI+PKTSNSNST PNSQLILQ
Sbjct: 182 ASHLQKHKKNLNKKDEEENSAKASSKSVPLKIPKESNSQSINPKTSNSNSTFPNSQLILQ 208

Query: 277 SHPNPTNPISSQVLVQSHPNSTNP 300
           S+PN TNPISSQVL+ SHPNS  P
Sbjct: 242 SYPNSTNPISSQVLLHSHPNSAIP 208

[Close]

BLAST of Cucsat.G3344 vs. NCBI nr
Match: XP_016901048.1 (PREDICTED: uncharacterized protein LOC107991159 [Cucumis melo])

HSP 1 Score: 289 bits (739), Expect = 6.13e-91
Identity = 166/264 (62.88%), Postives = 181/264 (68.56%), Query Frame = 0


Query: 37  DDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSSSN 96
           +D GF GVN SCDYLVQ PDHQPL LVP+HVGCSSH V                      
Sbjct: 2   EDTGFSGVNGSCDYLVQSPDHQPLQLVPYHVGCSSHSV---------------------- 61

Query: 97  PVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPKAS 156
                                                SSSGI+++ RRVGRK SSKPKAS
Sbjct: 62  -----------------------------------GCSSSGINLDRRRVGRKSSSKPKAS 121

Query: 157 KKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCTQLYPRIILEQMSEKYPFVTRENI 216
           KKKNGYH  QG ++QRLIWT ELHQCFV+IFNRTP T+L+PR ILEQMS KYPFVTRENI
Sbjct: 122 KKKNGYHQPQGEKKQRLIWTPELHQCFVDIFNRTPSTKLFPRTILEQMSGKYPFVTRENI 181

Query: 217 ASHLQKHKTNLIKMKDKENSAKASSKSVPLKIPKESNSQSIHPKTSNSNSTIPNSQLILQ 276
           ASHLQKHK NL K  ++ENSAKASSKSVPLKIPKESNSQSI+PKTSNSNST PNSQLILQ
Sbjct: 182 ASHLQKHKKNLNKKDEEENSAKASSKSVPLKIPKESNSQSINPKTSNSNSTFPNSQLILQ 208

Query: 277 SHPNPTNPISSQVLVQSHPNSTNP 300
           S+PN TNPISSQVL+ SHPNS  P
Sbjct: 242 SYPNSTNPISSQVLLHSHPNSAIP 208

[Close]

BLAST of Cucsat.G3344 vs. NCBI nr
Match: XP_038896348.1 (two-component response regulator ORR25-like [Benincasa hispida])

HSP 1 Score: 194 bits (494), Expect = 1.79e-54
Identity = 139/290 (47.93%), Postives = 176/290 (60.69%), Query Frame = 0


Query: 36  EDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSSS 95
           E + GF GV  SCDY+VQ P+ Q L L+PH +G +S     ++S  +             
Sbjct: 10  EREGGFGGVKGSCDYIVQSPN-QSLQLIPHPIGFNSSTSANANSVQI------------- 69

Query: 96  NPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPKA 155
                                                  S+ ID    R+ +K SSKPKA
Sbjct: 70  ---------------------------------------STRIDDRRVRI-KKRSSKPKA 129

Query: 156 SKKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCTQ-LYPRIILEQMSEKYPFVTRE 215
           SKKK+GYH  QG ++ RLIWT ELHQ F+EI NR+P  + L+P+ ILEQM +K+PF+TRE
Sbjct: 130 SKKKDGYHQRQGAKKPRLIWTPELHQHFLEIHNRSPLHERLFPKKILEQMRKKFPFITRE 189

Query: 216 NIASHLQKHKTNLIKMKDKENSAKASSKSVPLKIPKESNSQSIHPKTSNSNSTIPNSQLI 275
           NIASHLQKH+  L KM+  ENSAK++SK  P K+ K  NSQ I   TSNSNST PN QLI
Sbjct: 190 NIASHLQKHRLFLKKME--ENSAKSTSKLAPPKVLKVPNSQPIPNNTSNSNSTNPNFQLI 240

Query: 276 LQSHPNPTNPISSQVLVQSHPNSTNPISSQVLLQSHPNSTNPISSQVLLQ 324
            QSH   TNP ++Q+++QSH NSTNP +SQ+LLQSHPNSTNP +SQ+LLQ
Sbjct: 250 PQSHSISTNP-NAQLILQSHSNSTNP-NSQLLLQSHPNSTNP-NSQLLLQ 240

[Close]

BLAST of Cucsat.G3344 vs. ExPASy TrEMBL
Match: A0A0A0K9E6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405930 PE=4 SV=1)

HSP 1 Score: 536 bits (1382), Expect = 1.65e-186
Identity = 280/282 (99.29%), Postives = 282/282 (100.00%), Query Frame = 0


Query: 35  MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSS 94
           MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSS
Sbjct: 1   MEDDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSS 60

Query: 95  SNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPK 154
           SNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPK
Sbjct: 61  SNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPK 120

Query: 155 ASKKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCTQLYPRIILEQMSEKYPFVTRE 214
           ASKKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCTQLYPRIILEQMSEKYPFVTRE
Sbjct: 121 ASKKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCTQLYPRIILEQMSEKYPFVTRE 180

Query: 215 NIASHLQKHKTNLIKMKDKENSAKASSKSVPLKIPKESNSQSIHPKTSNSNSTIPNSQLI 274
           NIASHLQKHKTNLIKMKDKENSAKASSKSVPLKIPKESNSQSIHPKTSNSNSTIPNSQLI
Sbjct: 181 NIASHLQKHKTNLIKMKDKENSAKASSKSVPLKIPKESNSQSIHPKTSNSNSTIPNSQLI 240

Query: 275 LQSHPNPTNPISSQVLVQSHPNSTNPISSQVLLQSHPNSTNP 316
           LQSHPNPTNPISSQVL+QSHPN+TNPISSQVLLQSHPNSTNP
Sbjct: 241 LQSHPNPTNPISSQVLLQSHPNATNPISSQVLLQSHPNSTNP 282

[Close]

BLAST of Cucsat.G3344 vs. ExPASy TrEMBL
Match: A0A5D3D3H7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001430 PE=4 SV=1)

HSP 1 Score: 289 bits (739), Expect = 2.04e-91
Identity = 166/264 (62.88%), Postives = 181/264 (68.56%), Query Frame = 0


Query: 37  DDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSSSN 96
           +D GF GVN SCDYLVQ PDHQPL LVP+HVGCSSH V                      
Sbjct: 2   EDTGFSGVNGSCDYLVQSPDHQPLQLVPYHVGCSSHSV---------------------- 61

Query: 97  PVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPKAS 156
                                                SSSGI+++ RRVGRK SSKPKAS
Sbjct: 62  -----------------------------------GCSSSGINLDRRRVGRKSSSKPKAS 121

Query: 157 KKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCTQLYPRIILEQMSEKYPFVTRENI 216
           KKKNGYH  QG ++QRLIWT ELHQCFV+IFNRTP T+L+PR ILEQMS KYPFVTRENI
Sbjct: 122 KKKNGYHQPQGEKKQRLIWTPELHQCFVDIFNRTPSTKLFPRTILEQMSGKYPFVTRENI 181

Query: 217 ASHLQKHKTNLIKMKDKENSAKASSKSVPLKIPKESNSQSIHPKTSNSNSTIPNSQLILQ 276
           ASHLQKHK NL K  ++ENSAKASSKSVPLKIPKESNSQSI+PKTSNSNST PNSQLILQ
Sbjct: 182 ASHLQKHKKNLNKKDEEENSAKASSKSVPLKIPKESNSQSINPKTSNSNSTFPNSQLILQ 208

Query: 277 SHPNPTNPISSQVLVQSHPNSTNP 300
           S+PN TNPISSQVL+ SHPNS  P
Sbjct: 242 SYPNSTNPISSQVLLHSHPNSAIP 208

[Close]

BLAST of Cucsat.G3344 vs. ExPASy TrEMBL
Match: A0A1S4DYK0 (uncharacterized protein LOC107991159 OS=Cucumis melo OX=3656 GN=LOC107991159 PE=4 SV=1)

HSP 1 Score: 289 bits (739), Expect = 2.97e-91
Identity = 166/264 (62.88%), Postives = 181/264 (68.56%), Query Frame = 0


Query: 37  DDPGFCGVNCSCDYLVQYPDHQPLHLVPHHVGCSSHPVVTSSSNPVVGSSSNHIVGSSSN 96
           +D GF GVN SCDYLVQ PDHQPL LVP+HVGCSSH V                      
Sbjct: 2   EDTGFSGVNGSCDYLVQSPDHQPLQLVPYHVGCSSHSV---------------------- 61

Query: 97  PVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSSKPKAS 156
                                                SSSGI+++ RRVGRK SSKPKAS
Sbjct: 62  -----------------------------------GCSSSGINLDRRRVGRKSSSKPKAS 121

Query: 157 KKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTPCTQLYPRIILEQMSEKYPFVTRENI 216
           KKKNGYH  QG ++QRLIWT ELHQCFV+IFNRTP T+L+PR ILEQMS KYPFVTRENI
Sbjct: 122 KKKNGYHQPQGEKKQRLIWTPELHQCFVDIFNRTPSTKLFPRTILEQMSGKYPFVTRENI 181

Query: 217 ASHLQKHKTNLIKMKDKENSAKASSKSVPLKIPKESNSQSIHPKTSNSNSTIPNSQLILQ 276
           ASHLQKHK NL K  ++ENSAKASSKSVPLKIPKESNSQSI+PKTSNSNST PNSQLILQ
Sbjct: 182 ASHLQKHKKNLNKKDEEENSAKASSKSVPLKIPKESNSQSINPKTSNSNSTFPNSQLILQ 208

Query: 277 SHPNPTNPISSQVLVQSHPNSTNP 300
           S+PN TNPISSQVL+ SHPNS  P
Sbjct: 242 SYPNSTNPISSQVLLHSHPNSAIP 208

[Close]

BLAST of Cucsat.G3344 vs. ExPASy TrEMBL
Match: A0A6J1KVU3 (two-component response regulator ARR11-like OS=Cucurbita maxima OX=3661 GN=LOC111498058 PE=4 SV=1)

HSP 1 Score: 118 bits (295), Expect = 9.92e-27
Identity = 89/181 (49.17%), Postives = 117/181 (64.64%), Query Frame = 0


Query: 128 NPVVDSSSSGIDVNGR---------RVGRKGSSKPKASKKKNGYHHVQ-GVRRQRLIWTT 187
           NPV    SSG DV+GR         R GRK S K K+SKKKNGY+H + G +++RLIWT 
Sbjct: 60  NPVGVPHSSG-DVDGRVTILPVIDDRTGRKTSLKAKSSKKKNGYYHRRNGEKKERLIWTP 119

Query: 188 ELHQCFVEIFNRTPCTQLYPRIILEQMSEKYPFVTRENIASHLQKHKTNLIKMKDKENS- 247
           ELHQCF+E +N+ P  +  P+ ILE+M  K+P+VTREN+ASHLQKH+  L   K+KE   
Sbjct: 120 ELHQCFLEYYNKFPNEKRVPKKILEEMRRKFPYVTRENVASHLQKHRLYLKHSKNKEQGK 179

Query: 248 -AKASSKSVPLK-IPKESNSQSIHPKTSNSN-STIPNSQLILQSHPNPTNPISSQVLVQS 294
            +K S+KSVP K I +E N   IH   +N+  ST PN+ L  QSH    NP ++Q  +Q+
Sbjct: 180 LSKPSTKSVPRKQINEEFN---IHQILNNTVISTCPNAVLPHQSHSISINP-NTQPPLQT 235

[Close]

BLAST of Cucsat.G3344 vs. ExPASy TrEMBL
Match: A0A6J1H8V1 (putative two-component response regulator ARR13 OS=Cucurbita moschata OX=3662 GN=LOC111461147 PE=4 SV=1)

HSP 1 Score: 111 bits (278), Expect = 6.25e-24
Identity = 85/180 (47.22%), Postives = 112/180 (62.22%), Query Frame = 0


Query: 128 NPVVDSSSSGIDVNGR---------RVGRKGSSKPKASKKKNGYHHVQ-GVRRQRLIWTT 187
           NPV    SSG DV+GR         R  R  S   K+SKKKNGY+H + G +++RLIWT 
Sbjct: 41  NPVGVPHSSG-DVDGRVGILPVIDDRTRRNSSLNAKSSKKKNGYYHRRNGEKKERLIWTP 100

Query: 188 ELHQCFVEIFNRTPCTQLYPRIILEQMSEKYPFVTRENIASHLQKHKTNLIKMKDKENS- 247
           ELHQCF+E +N+ P  +  P+ IL +M  K+PFVTREN+ASHLQKH+  L +  +KE   
Sbjct: 101 ELHQCFLEYYNQFPNEKRVPKKILGEMRRKFPFVTRENVASHLQKHRLYLKQSNNKEQEK 160

Query: 248 -AKASSKSVPLK-IPKESNSQSIHPKTSNSNSTIPNSQLILQSHPNPTNPISSQVLVQSH 294
            +K S+KSVP K I +ESN   I   T+ S  T PN+ L  QSH    NP ++Q  +Q+H
Sbjct: 161 LSKPSTKSVPRKQINEESNIHQILNNTAIS--TCPNAVLPHQSHSISINP-NAQPPLQTH 216

[Close]

BLAST of Cucsat.G3344 vs. TAIR 10
Match: AT3G16857.1 (response regulator 1 )

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-06
Identity = 35/116 (30.17%), Postives = 57/116 (49.14%), Query Frame = 0


Query: 124 GSSSNPVVDSSSSGIDVNGRRVGRKGSSKPKASKKKNGYHHVQG---------VRRQRLI 183
           G      V      +D N   V    + +  + K+K+     QG         +++ R++
Sbjct: 182 GGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDASNLKKPRVV 241

Query: 184 WTTELHQCFVEIFNRTPCTQLYPRIILEQMSEKYPFVTRENIASHLQKHKTNLIKM 231
           W+ ELHQ FV   N+    +  P+ ILE M+   P +TREN+ASHLQK++  L ++
Sbjct: 242 WSVELHQQFVAAVNQLGVEKAVPKKILELMN--VPGLTRENVASHLQKYRIYLRRL 295

[Close]

BLAST of Cucsat.G3344 vs. TAIR 10
Match: AT3G16857.2 (response regulator 1 )

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-06
Identity = 35/116 (30.17%), Postives = 57/116 (49.14%), Query Frame = 0


Query: 124 GSSSNPVVDSSSSGIDVNGRRVGRKGSSKPKASKKKNGYHHVQG---------VRRQRLI 183
           G      V      +D N   V    + +  + K+K+     QG         +++ R++
Sbjct: 182 GGGGGAAVSGGEDAVDDNSSSVNEGNNWRSSSRKRKDEEGEEQGDDKDEDASNLKKPRVV 241

Query: 184 WTTELHQCFVEIFNRTPCTQLYPRIILEQMSEKYPFVTRENIASHLQKHKTNLIKM 231
           W+ ELHQ FV   N+    +  P+ ILE M+   P +TREN+ASHLQK++  L ++
Sbjct: 242 WSVELHQQFVAAVNQLGVEKAVPKKILELMN--VPGLTRENVASHLQKYRIYLRRL 295

[Close]

BLAST of Cucsat.G3344 vs. TAIR 10
Match: AT4G16110.1 (response regulator 2 )

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-06
Identity = 32/99 (32.32%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 132 DSSSSGIDVNGRRVGRKGSSKPKASKKKNGYHHVQGVRRQRLIWTTELHQCFVEIFNRTP 191
           D++SS ++    R  RK   + +   + +       +++ R++W+ ELHQ FV   N+  
Sbjct: 179 DNNSSSVNEGNGRSSRK-RKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQLG 238

Query: 192 CTQLYPRIILEQMSEKYPFVTRENIASHLQKHKTNLIKM 231
             +  P+ ILE M+   P +TREN+ASHLQK++  L ++
Sbjct: 239 VDKAVPKKILEMMN--VPGLTRENVASHLQKYRIYLRRL 274

[Close]

BLAST of Cucsat.G3344 vs. TAIR 10
Match: AT3G46640.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 8.9e-06
Identity = 49/152 (32.24%), Postives = 77/152 (50.66%), Query Frame = 0


Query: 92  GSSSNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSS 151
           G SS P   SS+N++ +      VGSSS    GS S     S+  G D      G    S
Sbjct: 74  GGSSGPNTSSSNNNVEEEDR---VGSSS---PGSDSKKQKTSNGDGDDGG----GVDPDS 133

Query: 152 KPKASKKKNGYHHVQG--VRRQRLIWTTELHQCFVEIFNRTPCTQLYPRIILEQMSEKYP 211
              A +  +G   + G  ++R RL+WT +LH+ FV++          P+ I++ M+ +  
Sbjct: 134 AMAAEEGDSGTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVE-- 193

Query: 212 FVTRENIASHLQKHKTNLIKMKDKENSAKASS 242
            +TREN+ASHLQK++  L +M+   N   ++S
Sbjct: 194 GLTRENVASHLQKYRLYLKRMQGLTNEGPSAS 213

[Close]

BLAST of Cucsat.G3344 vs. TAIR 10
Match: AT3G46640.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 48.9 bits (115), Expect = 8.9e-06
Identity = 49/152 (32.24%), Postives = 77/152 (50.66%), Query Frame = 0


Query: 92  GSSSNPVVGSSSNHIVDSSSNPVVGSSSNHVVGSSSNPVVDSSSSGIDVNGRRVGRKGSS 151
           G SS P   SS+N++ +      VGSSS    GS S     S+  G D      G    S
Sbjct: 74  GGSSGPNTSSSNNNVEEEDR---VGSSS---PGSDSKKQKTSNGDGDDGG----GVDPDS 133

Query: 152 KPKASKKKNGYHHVQG--VRRQRLIWTTELHQCFVEIFNRTPCTQLYPRIILEQMSEKYP 211
              A +  +G   + G  ++R RL+WT +LH+ FV++          P+ I++ M+ +  
Sbjct: 134 AMAAEEGDSGTEDLSGKTLKRPRLVWTPQLHKRFVDVVAHLGIKNAVPKTIMQLMNVE-- 193

Query: 212 FVTRENIASHLQKHKTNLIKMKDKENSAKASS 242
            +TREN+ASHLQK++  L +M+   N   ++S
Sbjct: 194 GLTRENVASHLQKYRLYLKRMQGLTNEGPSAS 213

The following BLAST results are available for this feature:

BLAST of Cucsat.G3344 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q940D0	1.5e-05	30.17	Two-component response regulator ARR1 OS=Arabidopsis thaliana OX=3702 GN=ARR1 PE...	[more]
Q9ZWJ9	1.5e-05	32.32	Two-component response regulator ARR2 OS=Arabidopsis thaliana OX=3702 GN=ARR2 PE...	[more]
Q9SNB4	1.3e-04	32.24	Transcription factor LUX OS=Arabidopsis thaliana OX=3702 GN=LUX PE=1 SV=1	[more]
Q8L9Y3	2.8e-04	32.98	Two-component response regulator ARR14 OS=Arabidopsis thaliana OX=3702 GN=ARR14 ...	[more]

BLAST of Cucsat.G3344 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031745104.1	2.02e-156	87.59	probable serine/threonine-protein kinase cdc7 [Cucumis sativus]	[more]
KAE8646357.1	1.17e-105	100.00	hypothetical protein Csa_015615, partial [Cucumis sativus]	[more]
KAA0046669.1	4.20e-91	62.88	hypothetical protein E6C27_scaffold427G00360 [Cucumis melo var. makuwa] >TYK1820...	[more]
XP_016901048.1	6.13e-91	62.88	PREDICTED: uncharacterized protein LOC107991159 [Cucumis melo]	[more]
XP_038896348.1	1.79e-54	47.93	two-component response regulator ORR25-like [Benincasa hispida]	[more]

BLAST of Cucsat.G3344 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9E6	1.65e-186	99.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405930 PE=4 SV=1	[more]
A0A5D3D3H7	2.04e-91	62.88	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S4DYK0	2.97e-91	62.88	uncharacterized protein LOC107991159 OS=Cucumis melo OX=3656 GN=LOC107991159 PE=...	[more]
A0A6J1KVU3	9.92e-27	49.17	two-component response regulator ARR11-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1H8V1	6.25e-24	47.22	putative two-component response regulator ARR13 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Cucsat.G3344 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16857.1	1.1e-06	30.17	response regulator 1	[more]
AT3G16857.2	1.1e-06	30.17	response regulator 1	[more]
AT4G16110.1	1.1e-06	32.32	response regulator 2	[more]
AT3G46640.1	8.9e-06	32.24	Homeodomain-like superfamily protein	[more]
AT3G46640.2	8.9e-06	32.24	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 137..190 e-value: 3.4E-10 score: 38.1
None	No IPR available	GENE3D	1.10.10.60		coord: 134..197 e-value: 7.3E-16 score: 59.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..290
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 113..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..290
None	No IPR available	PANTHER	PTHR43874	TWO-COMPONENT RESPONSE REGULATOR	coord: 12..285
None	No IPR available	PANTHER	PTHR43874:SF19	RESPONSE REGULATOR 23-RELATED	coord: 12..285
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 134..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G3344.T1	Cucsat.G3344.T1	mRNA
Cucsat.G3344.T2	Cucsat.G3344.T2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050794	regulation of cellular process
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0003677	DNA binding