Cucsat.G328 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G328
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	DNA replication complex GINS protein SLD5
Location	ctg1: 7234351 .. 7238372 (-)
RNA-Seq Expression	Cucsat.G328
Synteny	Cucsat.G328

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGACTCAATTGATCTGAATCGGGTCGGAGGATCGAATACGTAAAACAGAAAATTGAAAGCCTGCGGAAGCATATATTTGTTGTTCCTTTGGCGCCATTCCGCTGCTGCCTTTGGCTCTTCCATTCTCTCCCAAAGACGAAACACAATTGTAAGCGTTCCTTCAATTTTTCATACGGGAATTTTCTTTTTGAGAACTTGGTTTTTGCTGAATTCTCTGTTTTGTTTATTCTCGTGTTGGGAGGGTTTTAATATTTGAGCTACGAAGGTTGAGGTTGGGGGTAAAGGGTAGGGTGTGAAGGAGTCAGGGAGTTGAGGGATTAGGGCCTTTCTTTTTCGATCAAATTTTAGAGACTATGTTGCCATTTCTTATTATCCTTTTAGTTTTCTTAGTTTTATCCATTTTTCGGTCAGAATTTCTTAGAGTGAGATTGCTTATTTTTCATGTTTGAGTTGCTTGAGTATTTGATTGTATGTTTTGTTTGATATTACTTCTTGAATCCTTTGTTATTTAAGCCTATGAGAATAGTTAACTCTACAGCTACTAAGCATTTAATTCGTGCTTATTGGGTTAGGAGAGCTCTTAATAGTTTATCCCTTTTTTGTTGTCATCCCCATTGAAAAGCCTTTGACCCACTTTACTACTTCTGTTTTTTCTTAAATGTAGCGGCCATTGCATGGTCATAGACTCATAGATATTAAGACCTTTTAAAAACGGGGTAACAAGATCTTGTGAAATTCGTAATACTGATTTTAAGTATGGCATCTTAAGTCACAATTAACTTCTCATCTCAATTTGTTATGGTATTGATAGGAAAACAGTCTTTGAGAGTCGGCAGAATAATTGGAGAACATGGCATCAAATTTGGGAGGAGCATCGATATCACAAACAGATGATTTCGAGACGTTCACACCAACGACTGATGTTGAGCCTCTAAAGAGGGCTTGGCGTAATGAAAAGGCTGCTCCTGAGATTCTACCCTATGAGGCATCTTTGGTTGGGAGAATCAAAGAGCAGATCCAAGCAATGGTATTCCAAAATTCTGCTTAAGATATTCAATGCATGTTTAATTCCCTAGCAAAGAAAAACAGTTTCAATGTCACACCTATTGTAATCCTCATGGCATTATTTATCAAATAATTGAATATCATCTCTGGAACTTTAGTAATTCATGATTTCATTTTTATAAATGTAGTTTTTGAAATTGCAATTTTGGTTTTTATATTCGATTCTTCAAATTTATTATTTAATTTTATATAGAGGTTTTGTACTTGTCCCATTAACGCTCTTTTGGTTCATATGGCACAATTTGAGCATGCAGATCATCTTGGTCATGAACGAAAAAGACATATAATACATTTTTCTTGAATTGTAACAGTTCTTCAATTGTGTGGTCCATTTTCTTTATTTATCTATTACTGATATTGATACCAGTTGCATCCATTCACAGGAAGATACTATAGAGGAATATTCAAGAAGTGGCATCGATCCCCTCATTGTATCACTCTATCAAATGGATTTAGATAGGGTACAGTTCTTGTTGAGATCATATATTAGGAGTCGCTTGCAGAAGGTACAACTTACCTATAGTTTAATTTTTTTCCACAGATAGTAGTTATGCTTTTGTGTCTCATTTTTCCTTTTCTCCTTTCTATATTTCGTATTAGTTATAATGATTTCATTGCATTTGAAATCATGAATGTGTATATTCCACACAATGACACAAACATAGGAAACAGATCATGACTTATGTGACCAAGTTAGGAGAGAAGATGAATTTGAATAATACCTCAATGCGTCTTATTAAATTCAACAAAGCACAGCTTATACACACAAGGCCTCGTTAAACCATACATAAGCCACAAATAAGCTTGACAGAAATAAAGAAATTAAACTACTTAGAAGCACACTTCTCCACCGAAGCATCCAACTTAATACATCAATGACCCAACTATAAAATCAATTTAATTCTCCAATTCTATACTATTACTTCTCTTCTTTTAATTTAAAACAATCTTCATCCCCCAGATTGAGAAGTACATGCTCTATATCTTGAAGTCAGATGAACTTTTCGGACGTCTTTCTAGAGAAGAGATAACATTTACTGATAGGTGAATGCTATCATCATGTTGTTCATTTTTTTAATAGTCCAGTAGTTTTTATTTATTAATTTTTTTTCCTGGCATGTTATGGTGCAGGTGTCGCCATGATATGAAAAAACATTTTGATGAGAGTGTTCTATCAAAATTGCCAAATAATTATCAGGACATTTTGAAGCAATCTATAACAAGTGAAGAGGATGACATGGGTACTCAATACCTTCAAAATAATTTCTTTGATTTTTTTTTCCATAAAGCACTGCAATCACATGCTCTCGCATTCTTTTCTTAAATGTTCACATTCATGTTATGTATAACTCAATTTGAATATGCAGATGGTAATGTATTTTGACACCGTGCAATTCCTTTAGAAGGATCAATCTTGTTACAGAGCGTTGATTAAATAGTCCATAATGGAATTGCAATATATTTTAAGAAATTAAAAGTTCCAAAAAGAAATAGATTTCTTTCAGTTTTTCTATCAGTGGAGCGTTTGTCATAGGTGCTCAAAATTATAACTTGTTGGATACATTCACGTGGTATTCTAGGATAGTTCAGATCAACTCCCATGTAGAATTTTATTTTCATATTGCTGCCAATATTCTTTCACTTCATGCATCCTAGTAGGATTTCTGGCCAGATGGCATGGATTTTGTGTTCCTTTATAAACTGCCAGGAGATAATTTTTTTTAAAAAACTTTAAATACTACTTTTTAAACACTATTTTCTCCCCGCACTTTCAAAAGTTCATTTTTATTGATGCATGTTTTGTTTAAATGATTTTGGTATTGTCTGATTTAGTTCCAGAACCTCCATTGGACACGTTTGTGGTCTGCAAAAGTAAGGAATATCTTGAACACATACAGCTTGAGGATGAGGAAGAGAGAGCATCTAGTAGAATGTAACTTTTCGTTGTCCTCTTTTGTATTATTTTACTCCCTTTATAATTTCCTTCTTTTTGCTATCATATATGACCATATCCTACAACATACCAAATTCTACAGAGAGGAGCCTTTTGAGATGGAGGCCAATGTGTTGCACATTATTCGCTACAGGCCCATAAAATCACTTGTAGAGAGCGGGAGAATTGATTTGCTGTAAACAAAATCTCTATCGCATAGCAGGTTTCGACATGGGTACCTCTCACCATCTTTATTATCTTGCATCTTGTCTTTGTCAATTTGTATGTGATAAAAGGCACTGTTCAAGTTTGTTTTGGTAGTTTTATAGCATTAATGTTGGTGACTTTTCCATGAAGTGAATAATCTTAACAGCAGTTGCAAGGTCTGAACCCGTTCCTAGATGGTTTTTCAAAGTAGGCTAACCAGGATGTCTGATTGCTAGTAACTGTGTAGCATTAGTGCAACCAACTGCTAAAATAGCCATGACATCTGCCTTCAACTTGACTTTTGACATATTTTTATTTTAAATTTTAATTTGATTTGATCATATTGAGATTCAAACCTCTAAAATCTGGTAATAGAGTATTAAGCATTTGAGTTATTTTAATATAGATTTGTTTGCGATTATCAGTATTTAACCTAACATAAGACATGGTGAAATTTATCCATATCATATAATATGTACCCCTGAAAAAAAAATTCAGTTCAATATAAAAAGTTTTTTAAAACAATTAAAAGCTTGCATAGAATAAATCAAAAAGCTCCTTTGCTAATTCCCTCTTGTATTCTTTCCTTTTATTATTGTGATTTCATTTTAAAGGTGATGGAGACTATTGCATTGGTATCTTGGATGCTAATTTCAGCATTGGTTGAGGCTCATAAATGAAAGGAATGGTAGAGCATTGAAGGGCATTATCAAATGCTGGTGAGCCCTTTCAATCTGAAAACTCATGATATTAAATGATGAATGTGGCATTACAGTGAAACCAAACAGTATAATTTATAGCAATCAGCTACGCATCAATTAGAAATGATGGATACTTTTAGATGTTGATTTACAATTTTAGTCTATAAACTTTGCTAGGTGTATCTGTTTGATACTTGAAATTTGAAAGCTATCCATGTCTATGAAGTTTTAGTTTTATATCTAATAGGTCATTGAGCTTAAAATTATGTATTTAGCTTTGTATAATAGATATATTAATTTTATGTATTTAGCTTTGTATAATAGATATATTAATTTTCAACT

Coding sequence (CDS)

ATGGCATCAAATTTGGGAGGAGCATCGATATCACAAACAGATGATTTCGAGACGTTCACACCAACGACTGATGTTGAGCCTCTAAAGAGGGCTTGGCGTAATGAAAAGGCTGCTCCTGAGATTCTACCCTATGAGGCATCTTTGGTTGGGAGAATCAAAGAGCAGATCCAAGCAATGGAAGATACTATAGAGGAATATTCAAGAAGTGGCATCGATCCCCTCATTGTATCACTCTATCAAATGGATTTAGATAGGGTACAGTTCTTGTTGAGATCATATATTAGGAGTCGCTTGCAGAAGATTGAGAAGTACATGCTCTATATCTTGAAGTCAGATGAACTTTTCGGACGTCTTTCTAGAGAAGAGATAACATTTACTGATAGGTGTCGCCATGATATGAAAAAACATTTTGATGAGAGTGTTCTATCAAAATTGCCAAATAATTATCAGGACATTTTGAAGCAATCTATAACAAGTGAAGAGGATGACATGGTTCCAGAACCTCCATTGGACACGTTTGTGGTCTGCAAAAGTAAGGAATATCTTGAACACATACAGCTTGAGGATGAGGAAGAGAGAGCATCTAGTAGAATAGAGGAGCCTTTTGAGATGGAGGCCAATGTGTTGCACATTATTCGCTACAGGCCCATAAAATCACTTGTAGAGAGCGGGAGAATTGATTTGCTGTAA

Protein sequence

MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAMEDTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGRLSREEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL

Homology

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BLAST of Cucsat.G328 vs. ExPASy Swiss-Prot
Match: Q99LZ3 (DNA replication complex GINS protein SLD5 OS=Mus musculus OX=10090 GN=Gins4 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-22
Identity = 71/214 (33.18%), Postives = 120/214 (56.07%), Query Frame = 0


Query: 20  TPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAMEDTIEEYSRSGIDPLIVSLY 79
           TP   +E L++AW NEK APE+L  +A +V  + EQ++ ME+ +    R+    L VS++
Sbjct: 22  TPAELIEKLEQAWMNEKFAPELLESKAEIVECVMEQLEHMEENLR---RAKKGDLKVSIH 81

Query: 80  QMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGR-----LSREEITFTDRCRHDMK 139
           +M+++R++++L SY+R RL KIEK+  +IL+ +++        LS EE  F        +
Sbjct: 82  RMEMERIRYVLSSYLRCRLMKIEKFFPHILEKEKVRSEGEPSSLSPEEFVFAKEYMDHTE 141

Query: 140 KHFDESVLSKLPNNYQDI-LKQSITSEEDDMEPPLDTFVVCKSKEYLEHIQLEDEEERAS 199
            HF    L  +P N Q + L +++       +P LD++V  + KE  E+I +E E   A 
Sbjct: 142 THFKNVALKHMPPNLQKVDLLRAVP------KPDLDSYVFLRVKERQENILVEPE---AD 201

Query: 200 SRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 228
            + +   ++E    H+IRY+ I  LV SG + L+
Sbjct: 202 EQRDYVIDLEVGSQHLIRYKTIAPLVASGAVQLI 223

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BLAST of Cucsat.G328 vs. ExPASy Swiss-Prot
Match: Q499W2 (DNA replication complex GINS protein SLD5 OS=Rattus norvegicus OX=10116 GN=Gins4 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.5e-22
Identity = 72/230 (31.30%), Postives = 124/230 (53.91%), Query Frame = 0


Query: 4   NLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAMEDTI 63
           +L G    +  +    TP   +E L++AW NEK APE+L  ++ +V  + EQ++ ME+ +
Sbjct: 6   DLHGQDSDEGSEEVVLTPAELIERLEQAWMNEKFAPELLESKSEIVECVMEQLEHMEENL 65

Query: 64  EEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELF-----GRL 123
               R+    L VS+++M+++R++++L SY+R RL KIEK+  +IL+ ++         L
Sbjct: 66  R---RAKKGDLKVSIHRMEMERIRYVLSSYLRCRLMKIEKFFPHILEKEKTRPAGEPSSL 125

Query: 124 SREEITFTDRCRHDMKKHFDESVLSKLPNNYQDI-LKQSITSEEDDMEPPLDTFVVCKSK 183
           S EE  F        + HF    L  +P N Q + L +++       +P LD++V  + K
Sbjct: 126 SPEEFVFAKEYMDHTETHFKNVALKHMPPNLQKVDLMRAVP------KPDLDSYVFLRVK 185

Query: 184 EYLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 228
           E  E+I +E E   A  + +   ++E    H+IRY+ I  LV SG + L+
Sbjct: 186 ERQENILVEPE---ADEQRDYVIDLEEGSQHLIRYKTIAPLVASGAVQLI 223

[Close]

BLAST of Cucsat.G328 vs. ExPASy Swiss-Prot
Match: Q7ZT48 (DNA replication complex GINS protein SLD5 OS=Xenopus laevis OX=8355 GN=gins4 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.3e-21
Identity = 76/234 (32.48%), Postives = 118/234 (50.43%), Query Frame = 0


Query: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60
           M   L  +     +D E  TP   +  L+ AW NEK APE+L  ++ +V  + EQ+  ME
Sbjct: 1   MEDELALSDQGSDEDEEVLTPAELINKLEEAWLNEKFAPELLESKSEVVECVMEQLNHME 60

Query: 61  DTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFG---- 120
             +    R+    L +S + M+++R++++L SY+RSR+ KIEK+  +IL+ ++  G    
Sbjct: 61  QNLH---RAKPGDLKISFHHMEIERIRYMLSSYLRSRMLKIEKFFPHILEKEKSRGEGEP 120

Query: 121 -RLSREEITFTDRCRHDMKKHFDESVLSKLPNNYQ--DILKQSITSEEDDMEPPLDTFVV 180
             LS EE  F      + +       L  +P N Q  D+LK          +P LD+FV 
Sbjct: 121 PHLSPEEFAFAKEYMTNTETLLKSVALRHMPPNLQTVDLLKSV-------PKPNLDSFVF 180

Query: 181 CKSKEYLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 228
            + KE   +I +E E +  S   E   +ME    H+IRYR I  LV SG + L+
Sbjct: 181 LRVKEEQNNILVEPETDEQS---EYAIDMEVGSQHLIRYRTIAPLVASGAVKLI 221

[Close]

BLAST of Cucsat.G328 vs. ExPASy Swiss-Prot
Match: A2VE40 (DNA replication complex GINS protein SLD5 OS=Bos taurus OX=9913 GN=GINS4 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.1e-21
Identity = 67/214 (31.31%), Postives = 120/214 (56.07%), Query Frame = 0


Query: 20  TPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAMEDTIEEYSRSGIDPLIVSLY 79
           TP   ++ L++AW NEK APE+L  ++ +V  + EQ++ ME+ ++   R+    L VS++
Sbjct: 22  TPAELIDRLEQAWMNEKFAPELLENKSEIVECVMEQLEHMEENLK---RAKKGDLKVSIH 81

Query: 80  QMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGR-----LSREEITFTDRCRHDMK 139
           QM+++R++F+L SY+R RL KIEK+  + L+ ++         LS EE+ F      + +
Sbjct: 82  QMEMERIRFVLSSYLRCRLMKIEKFFPHTLEKEKTRREEEPPILSPEELVFAKEFLANTE 141

Query: 140 KHFDESVLSKLPNNYQDI-LKQSITSEEDDMEPPLDTFVVCKSKEYLEHIQLEDEEERAS 199
            +  ++ L  +P N Q + L +++       +P LD +V  + KE  E+I +E E +   
Sbjct: 142 TYLKDTALKHMPPNLQKVDLLRTVP------KPDLDAYVFLRVKERQENILVEPENDEQR 201

Query: 200 SRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 228
             +    ++E    H++RYR +  LV SG I L+
Sbjct: 202 DYV---IDLEEGSQHLMRYRTVAPLVASGAIQLI 223

[Close]

BLAST of Cucsat.G328 vs. ExPASy Swiss-Prot
Match: Q9BRT9 (DNA replication complex GINS protein SLD5 OS=Homo sapiens OX=9606 GN=GINS4 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.9e-20
Identity = 65/214 (30.37%), Postives = 118/214 (55.14%), Query Frame = 0


Query: 20  TPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAMEDTIEEYSRSGIDPLIVSLY 79
           TP   +E L++AW NEK APE+L  +  +V  + EQ++ ME+ +    R   + L VS++
Sbjct: 22  TPAELIERLEQAWMNEKFAPELLESKPEIVECVMEQLEHMEENLRRAKR---EDLKVSIH 81

Query: 80  QMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELF-----GRLSREEITFTDRCRHDMK 139
           QM+++R++++L SY+R RL KIEK+  ++L+ ++         LS EE+ F      + +
Sbjct: 82  QMEMERIRYVLSSYLRCRLMKIEKFFPHVLEKEKTRPEGEPSSLSPEELAFAREFMANTE 141

Query: 140 KHFDESVLSKLPNNYQDI-LKQSITSEEDDMEPPLDTFVVCKSKEYLEHIQLEDEEERAS 199
            +     L  +P N Q + L +++       +P LD++V  + +E  E+I +E + +   
Sbjct: 142 SYLKNVALKHMPPNLQKVDLFRAVP------KPDLDSYVFLRVRERQENILVEPDTDEQR 201

Query: 200 SRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 228
             +    ++E    H+IRY+ I  LV SG + L+
Sbjct: 202 DYV---IDLEKGSQHLIRYKTIAPLVASGAVQLI 223

[Close]

BLAST of Cucsat.G328 vs. NCBI nr
Match: XP_004134322.2 (DNA replication complex GINS protein SLD5 isoform X1 [Cucumis sativus] >XP_011650740.1 DNA replication complex GINS protein SLD5 isoform X1 [Cucumis sativus] >KGN56501.1 hypothetical protein Csa_011248 [Cucumis sativus])

HSP 1 Score: 439 bits (1128), Expect = 6.24e-155
Identity = 227/229 (99.13%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60
           MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME
Sbjct: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60

Query: 61  DTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGRLSR 120
           DTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGRLSR
Sbjct: 61  DTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGRLSR 120

Query: 121 EEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDM--EPPLDTFVVCKSKE 180
           EEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDM  EPPLDTFVVCKSKE
Sbjct: 121 EEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDMVPEPPLDTFVVCKSKE 180

Query: 181 YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 227
           YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL
Sbjct: 181 YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 229

[Close]

BLAST of Cucsat.G328 vs. NCBI nr
Match: XP_008438015.1 (PREDICTED: DNA replication complex GINS protein SLD5 isoform X1 [Cucumis melo] >XP_008438016.1 PREDICTED: DNA replication complex GINS protein SLD5 isoform X1 [Cucumis melo] >XP_008438017.1 PREDICTED: DNA replication complex GINS protein SLD5 isoform X1 [Cucumis melo])

HSP 1 Score: 432 bits (1111), Expect = 2.44e-152
Identity = 222/229 (96.94%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60
           MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME
Sbjct: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60

Query: 61  DTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGRLSR 120
           D+IEEYSRSGIDPLIVSLYQMDLDR+QFLLRSYIRSRLQKIEKYMLYILKSDELF RLS+
Sbjct: 61  DSIEEYSRSGIDPLIVSLYQMDLDRIQFLLRSYIRSRLQKIEKYMLYILKSDELFRRLSK 120

Query: 121 EEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDM--EPPLDTFVVCKSKE 180
           EEITFTDRCRHDMKKHFDESVLSKLPNNYQD+LKQSITSEEDDM  EPPLDTFVVCKSKE
Sbjct: 121 EEITFTDRCRHDMKKHFDESVLSKLPNNYQDVLKQSITSEEDDMVPEPPLDTFVVCKSKE 180

Query: 181 YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 227
           YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL
Sbjct: 181 YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 229

[Close]

BLAST of Cucsat.G328 vs. NCBI nr
Match: XP_022924491.1 (DNA replication complex GINS protein SLD5 [Cucurbita moschata] >XP_022924492.1 DNA replication complex GINS protein SLD5 [Cucurbita moschata] >XP_022924493.1 DNA replication complex GINS protein SLD5 [Cucurbita moschata] >XP_022924494.1 DNA replication complex GINS protein SLD5 [Cucurbita moschata] >XP_022924495.1 DNA replication complex GINS protein SLD5 [Cucurbita moschata] >XP_022980813.1 DNA replication complex GINS protein SLD5 [Cucurbita maxima] >XP_022980814.1 DNA replication complex GINS protein SLD5 [Cucurbita maxima] >XP_022980816.1 DNA replication complex GINS protein SLD5 [Cucurbita maxima] >XP_022980817.1 DNA replication complex GINS protein SLD5 [Cucurbita maxima] >XP_022980818.1 DNA replication complex GINS protein SLD5 [Cucurbita maxima] >XP_023526386.1 DNA replication complex GINS protein SLD5 [Cucurbita pepo subsp. pepo] >XP_023526387.1 DNA replication complex GINS protein SLD5 [Cucurbita pepo subsp. pepo] >XP_023526388.1 DNA replication complex GINS protein SLD5 [Cucurbita pepo subsp. pepo] >KAG6582622.1 DNA replication complex GINS protein SLD5, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019017.1 DNA replication complex GINS protein SLD5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 417 bits (1071), Expect = 3.05e-146
Identity = 214/229 (93.45%), Postives = 220/229 (96.07%), Query Frame = 0


Query: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60
           MAS+LGGAS+SQTDDFETFTPTTDVEPLKRAWRNEKAAPEILP+EASLVGRIKEQIQ ME
Sbjct: 1   MASSLGGASVSQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLME 60

Query: 61  DTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGRLSR 120
           DTIEEYSRSGIDPLIVSLYQMDLDR QFLLRSYIR RLQKIEKYMLYILKSDELF RLS 
Sbjct: 61  DTIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFRRLSE 120

Query: 121 EEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDM--EPPLDTFVVCKSKE 180
           EEITFTDRC HDMKKHFDESVLSKLPNNYQDIL+QSI SEEDDM  EPPLDTFVVCKSKE
Sbjct: 121 EEITFTDRCSHDMKKHFDESVLSKLPNNYQDILRQSIISEEDDMVPEPPLDTFVVCKSKE 180

Query: 181 YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 227
           YLEHIQLEDEEERASSR+EEPFEMEANVLHIIRY+PIKSLVESGRIDLL
Sbjct: 181 YLEHIQLEDEEERASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 229

[Close]

BLAST of Cucsat.G328 vs. NCBI nr
Match: XP_022147485.1 (DNA replication complex GINS protein SLD5 [Momordica charantia])

HSP 1 Score: 392 bits (1006), Expect = 2.55e-136
Identity = 200/229 (87.34%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60
           MAS+LGGA++SQTDDFE  TPT DVEPLKRAWRNEKAAPEILP+EASL+GRIKEQIQ ME
Sbjct: 2   MASSLGGATMSQTDDFEASTPTNDVEPLKRAWRNEKAAPEILPFEASLIGRIKEQIQLME 61

Query: 61  DTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGRLSR 120
           +TIEEYSRSGIDPLIVSLYQMDLDR QFLLRSYIR RLQKIEKYMLY+LKSDELFGRLS 
Sbjct: 62  ETIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYMLKSDELFGRLSE 121

Query: 121 EEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDM--EPPLDTFVVCKSKE 180
           EE  F +RC HD+K HFDESVLSKLPNNYQ IL+QSI SEEDDM  EPPLDTFVVCKSKE
Sbjct: 122 EERVFAERCCHDVKSHFDESVLSKLPNNYQSILRQSIISEEDDMVPEPPLDTFVVCKSKE 181

Query: 181 YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 227
           YLEHIQLEDE+ERASSR+EEPFEMEANVLHIIRY+PIKSLVESGRIDLL
Sbjct: 182 YLEHIQLEDEDERASSRLEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 230

[Close]

BLAST of Cucsat.G328 vs. NCBI nr
Match: TYK17610.1 (DNA replication complex GINS protein SLD5 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 374 bits (961), Expect = 5.86e-130
Identity = 192/198 (96.97%), Postives = 195/198 (98.48%), Query Frame = 0


Query: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60
           MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME
Sbjct: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60

Query: 61  DTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGRLSR 120
           DTIEEYSRSGIDPLIVSLYQMDLDR+QFLLRSYIRSRLQKIEKYMLYILKSDELF RLS+
Sbjct: 61  DTIEEYSRSGIDPLIVSLYQMDLDRIQFLLRSYIRSRLQKIEKYMLYILKSDELFRRLSK 120

Query: 121 EEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDM--EPPLDTFVVCKSKE 180
           EEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDM  EPPLDTFVVCKSKE
Sbjct: 121 EEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDMVPEPPLDTFVVCKSKE 180

Query: 181 YLEHIQLEDEEERASSRI 196
           YLEHIQLEDEEERASSR+
Sbjct: 181 YLEHIQLEDEEERASSRM 198

[Close]

BLAST of Cucsat.G328 vs. ExPASy TrEMBL
Match: A0A0A0L8W0 (DNA replication complex GINS protein SLD5 OS=Cucumis sativus OX=3659 GN=Csa_3G121760 PE=3 SV=1)

HSP 1 Score: 439 bits (1128), Expect = 3.02e-155
Identity = 227/229 (99.13%), Postives = 227/229 (99.13%), Query Frame = 0


Query: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60
           MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME
Sbjct: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60

Query: 61  DTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGRLSR 120
           DTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGRLSR
Sbjct: 61  DTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGRLSR 120

Query: 121 EEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDM--EPPLDTFVVCKSKE 180
           EEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDM  EPPLDTFVVCKSKE
Sbjct: 121 EEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDMVPEPPLDTFVVCKSKE 180

Query: 181 YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 227
           YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL
Sbjct: 181 YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 229

[Close]

BLAST of Cucsat.G328 vs. ExPASy TrEMBL
Match: A0A1S3AVG5 (DNA replication complex GINS protein SLD5 OS=Cucumis melo OX=3656 GN=LOC103483259 PE=3 SV=1)

HSP 1 Score: 432 bits (1111), Expect = 1.18e-152
Identity = 222/229 (96.94%), Postives = 226/229 (98.69%), Query Frame = 0


Query: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60
           MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME
Sbjct: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60

Query: 61  DTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGRLSR 120
           D+IEEYSRSGIDPLIVSLYQMDLDR+QFLLRSYIRSRLQKIEKYMLYILKSDELF RLS+
Sbjct: 61  DSIEEYSRSGIDPLIVSLYQMDLDRIQFLLRSYIRSRLQKIEKYMLYILKSDELFRRLSK 120

Query: 121 EEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDM--EPPLDTFVVCKSKE 180
           EEITFTDRCRHDMKKHFDESVLSKLPNNYQD+LKQSITSEEDDM  EPPLDTFVVCKSKE
Sbjct: 121 EEITFTDRCRHDMKKHFDESVLSKLPNNYQDVLKQSITSEEDDMVPEPPLDTFVVCKSKE 180

Query: 181 YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 227
           YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL
Sbjct: 181 YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 229

[Close]

BLAST of Cucsat.G328 vs. ExPASy TrEMBL
Match: A0A6J1J098 (DNA replication complex GINS protein SLD5 OS=Cucurbita maxima OX=3661 GN=LOC111480093 PE=3 SV=1)

HSP 1 Score: 417 bits (1071), Expect = 1.48e-146
Identity = 214/229 (93.45%), Postives = 220/229 (96.07%), Query Frame = 0


Query: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60
           MAS+LGGAS+SQTDDFETFTPTTDVEPLKRAWRNEKAAPEILP+EASLVGRIKEQIQ ME
Sbjct: 1   MASSLGGASVSQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLME 60

Query: 61  DTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGRLSR 120
           DTIEEYSRSGIDPLIVSLYQMDLDR QFLLRSYIR RLQKIEKYMLYILKSDELF RLS 
Sbjct: 61  DTIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFRRLSE 120

Query: 121 EEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDM--EPPLDTFVVCKSKE 180
           EEITFTDRC HDMKKHFDESVLSKLPNNYQDIL+QSI SEEDDM  EPPLDTFVVCKSKE
Sbjct: 121 EEITFTDRCSHDMKKHFDESVLSKLPNNYQDILRQSIISEEDDMVPEPPLDTFVVCKSKE 180

Query: 181 YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 227
           YLEHIQLEDEEERASSR+EEPFEMEANVLHIIRY+PIKSLVESGRIDLL
Sbjct: 181 YLEHIQLEDEEERASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 229

[Close]

BLAST of Cucsat.G328 vs. ExPASy TrEMBL
Match: A0A6J1E9C0 (DNA replication complex GINS protein SLD5 OS=Cucurbita moschata OX=3662 GN=LOC111431969 PE=3 SV=1)

HSP 1 Score: 417 bits (1071), Expect = 1.48e-146
Identity = 214/229 (93.45%), Postives = 220/229 (96.07%), Query Frame = 0


Query: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60
           MAS+LGGAS+SQTDDFETFTPTTDVEPLKRAWRNEKAAPEILP+EASLVGRIKEQIQ ME
Sbjct: 1   MASSLGGASVSQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLME 60

Query: 61  DTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGRLSR 120
           DTIEEYSRSGIDPLIVSLYQMDLDR QFLLRSYIR RLQKIEKYMLYILKSDELF RLS 
Sbjct: 61  DTIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFRRLSE 120

Query: 121 EEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDM--EPPLDTFVVCKSKE 180
           EEITFTDRC HDMKKHFDESVLSKLPNNYQDIL+QSI SEEDDM  EPPLDTFVVCKSKE
Sbjct: 121 EEITFTDRCSHDMKKHFDESVLSKLPNNYQDILRQSIISEEDDMVPEPPLDTFVVCKSKE 180

Query: 181 YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 227
           YLEHIQLEDEEERASSR+EEPFEMEANVLHIIRY+PIKSLVESGRIDLL
Sbjct: 181 YLEHIQLEDEEERASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 229

[Close]

BLAST of Cucsat.G328 vs. ExPASy TrEMBL
Match: A0A6J1D0B0 (DNA replication complex GINS protein SLD5 OS=Momordica charantia OX=3673 GN=LOC111016396 PE=3 SV=1)

HSP 1 Score: 392 bits (1006), Expect = 1.23e-136
Identity = 200/229 (87.34%), Postives = 213/229 (93.01%), Query Frame = 0


Query: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60
           MAS+LGGA++SQTDDFE  TPT DVEPLKRAWRNEKAAPEILP+EASL+GRIKEQIQ ME
Sbjct: 2   MASSLGGATMSQTDDFEASTPTNDVEPLKRAWRNEKAAPEILPFEASLIGRIKEQIQLME 61

Query: 61  DTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGRLSR 120
           +TIEEYSRSGIDPLIVSLYQMDLDR QFLLRSYIR RLQKIEKYMLY+LKSDELFGRLS 
Sbjct: 62  ETIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYMLKSDELFGRLSE 121

Query: 121 EEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDM--EPPLDTFVVCKSKE 180
           EE  F +RC HD+K HFDESVLSKLPNNYQ IL+QSI SEEDDM  EPPLDTFVVCKSKE
Sbjct: 122 EERVFAERCCHDVKSHFDESVLSKLPNNYQSILRQSIISEEDDMVPEPPLDTFVVCKSKE 181

Query: 181 YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 227
           YLEHIQLEDE+ERASSR+EEPFEMEANVLHIIRY+PIKSLVESGRIDLL
Sbjct: 182 YLEHIQLEDEDERASSRLEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 230

[Close]

BLAST of Cucsat.G328 vs. TAIR 10
Match: AT5G49010.1 (DNA replication protein-related )

HSP 1 Score: 232.6 bits (592), Expect = 3.0e-61
Identity = 132/231 (57.14%), Postives = 165/231 (71.43%), Query Frame = 0


Query: 1   MASN--LGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQA 60
           MASN   GG++     D+ET   T+DVE LKRAWRNEKAAPEIL YE +LV R KEQI+ 
Sbjct: 1   MASNSEAGGSA-----DYETLMSTSDVELLKRAWRNEKAAPEILQYEGALVDRAKEQIEL 60

Query: 61  MEDTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGRL 120
           +E+TIE+Y  +GIDPL+VSLYQMDLDR QFLLRSY+R RL KIEK+M + L S+E   RL
Sbjct: 61  VEETIEDYVENGIDPLVVSLYQMDLDRAQFLLRSYLRVRLLKIEKFMFHNLNSEEAERRL 120

Query: 121 SREEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDM--EPPLDTFVVCKS 180
           S +E  F  RC  D+ KHF+E+VL KLP NYQ +LKQS+ SE DDM  +P LDTFVVC+S
Sbjct: 121 SEQEKVFATRCADDLAKHFEETVLLKLPENYQSVLKQSLISEVDDMVPQPHLDTFVVCRS 180

Query: 181 KEYLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 228
           K ++  + L +E E       E  EME   L+ IRY+ +K  +ESG+IDL+
Sbjct: 181 KNFVS-LNLYEEGES-----PETVEMERGDLYFIRYKIVKRAIESGQIDLI 220

[Close]

BLAST of Cucsat.G328 vs. TAIR 10
Match: AT5G49010.2 (DNA replication protein-related )

HSP 1 Score: 194.9 bits (494), Expect = 7.0e-50
Identity = 109/196 (55.61%), Postives = 135/196 (68.88%), Query Frame = 0


Query: 1   MASN--LGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQA 60
           MASN   GG++     D+ET   T+DVE LKRAWRNEKAAPEIL YE +LV R KEQI+ 
Sbjct: 1   MASNSEAGGSA-----DYETLMSTSDVELLKRAWRNEKAAPEILQYEGALVDRAKEQIEL 60

Query: 61  MEDTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGRL 120
           +E+TIE+Y  +GIDPL+VSLYQMDLDR QFLLRSY+R RL KIEK+M + L S+E   RL
Sbjct: 61  VEETIEDYVENGIDPLVVSLYQMDLDRAQFLLRSYLRVRLLKIEKFMFHNLNSEEAERRL 120

Query: 121 SREEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDMEPPLDTFVVCKSKE 180
           S +E  F  RC  D+ KHF+E+VL KLP NYQ +LKQS+ SE DDM   L+   +  +  
Sbjct: 121 SEQEKVFATRCADDLAKHFEETVLLKLPENYQSVLKQSLISEVDDMGTSLNLITLDHNLS 180

Query: 181 YLEHIQLEDEEERASS 195
           +L    +  E    SS
Sbjct: 181 WLRLFAIISEHSLHSS 191

The following BLAST results are available for this feature:

BLAST of Cucsat.G328 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99LZ3	1.2e-22	33.18	DNA replication complex GINS protein SLD5 OS=Mus musculus OX=10090 GN=Gins4 PE=1...	[more]
Q499W2	3.5e-22	31.30	DNA replication complex GINS protein SLD5 OS=Rattus norvegicus OX=10116 GN=Gins4...	[more]
Q7ZT48	2.3e-21	32.48	DNA replication complex GINS protein SLD5 OS=Xenopus laevis OX=8355 GN=gins4 PE=...	[more]
A2VE40	5.1e-21	31.31	DNA replication complex GINS protein SLD5 OS=Bos taurus OX=9913 GN=GINS4 PE=2 SV...	[more]
Q9BRT9	1.9e-20	30.37	DNA replication complex GINS protein SLD5 OS=Homo sapiens OX=9606 GN=GINS4 PE=1 ...	[more]

BLAST of Cucsat.G328 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134322.2	6.24e-155	99.13	DNA replication complex GINS protein SLD5 isoform X1 [Cucumis sativus] >XP_01165...	[more]
XP_008438015.1	2.44e-152	96.94	PREDICTED: DNA replication complex GINS protein SLD5 isoform X1 [Cucumis melo] >...	[more]
XP_022924491.1	3.05e-146	93.45	DNA replication complex GINS protein SLD5 [Cucurbita moschata] >XP_022924492.1 D...	[more]
XP_022147485.1	2.55e-136	87.34	DNA replication complex GINS protein SLD5 [Momordica charantia]	[more]
TYK17610.1	5.86e-130	96.97	DNA replication complex GINS protein SLD5 isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of Cucsat.G328 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L8W0	3.02e-155	99.13	DNA replication complex GINS protein SLD5 OS=Cucumis sativus OX=3659 GN=Csa_3G12...	[more]
A0A1S3AVG5	1.18e-152	96.94	DNA replication complex GINS protein SLD5 OS=Cucumis melo OX=3656 GN=LOC10348325...	[more]
A0A6J1J098	1.48e-146	93.45	DNA replication complex GINS protein SLD5 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1E9C0	1.48e-146	93.45	DNA replication complex GINS protein SLD5 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1D0B0	1.23e-136	87.34	DNA replication complex GINS protein SLD5 OS=Momordica charantia OX=3673 GN=LOC1...	[more]

BLAST of Cucsat.G328 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49010.1	3.0e-61	57.14	DNA replication protein-related	[more]
AT5G49010.2	7.0e-50	55.61	DNA replication protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 49..69
None	No IPR available	GENE3D	1.20.58.1030		coord: 11..158 e-value: 1.7E-45 score: 156.5
None	No IPR available	GENE3D	3.40.5.60		coord: 165..227 e-value: 8.7E-18 score: 66.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	SUPERFAMILY	160059	PriA/YqbF domain	coord: 168..227
IPR031633	DNA replication complex GINS protein SLD5, C-terminal	PFAM	PF16922	SLD5_C	coord: 166..227 e-value: 6.4E-14 score: 51.9
IPR008591	GINS complex subunit Sld5	PIRSF	PIRSF007764	GINS_Sld5	coord: 1..227 e-value: 1.7E-60 score: 202.5
IPR008591	GINS complex subunit Sld5	PANTHER	PTHR21206	SLD5 PROTEIN	coord: 10..227
IPR021151	GINS subunit, domain A	PFAM	PF05916	Sld5	coord: 73..122 e-value: 1.1E-4 score: 22.7
IPR038749	GINS complex protein Sld5, alpha-helical domain	CDD	cd11711	GINS_A_Sld5	coord: 24..142 e-value: 1.20564E-45 score: 146.216
IPR036224	GINS, helical bundle-like domain superfamily	SUPERFAMILY	158573	GINS helical bundle-like	coord: 20..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G328.T1	Cucsat.G328.T1	mRNA
Cucsat.G328.T2	Cucsat.G328.T2	mRNA
Cucsat.G328.T4	Cucsat.G328.T4	mRNA
Cucsat.G328.T3	Cucsat.G328.T3	mRNA
Cucsat.G328.T6	Cucsat.G328.T6	mRNA
Cucsat.G328.T5	Cucsat.G328.T5	mRNA
Cucsat.G328.T11	Cucsat.G328.T11	mRNA
Cucsat.G328.T8	Cucsat.G328.T8	mRNA
Cucsat.G328.T9	Cucsat.G328.T9	mRNA
Cucsat.G328.T10	Cucsat.G328.T10	mRNA
Cucsat.G328.T7	Cucsat.G328.T7	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0000727	double-strand break repair via break-induced replication
cellular_component	GO:0000811	GINS complex