Cucsat.G2981 (gene) Cucumber (B10) v3

Overview
NameCucsat.G2981
Typegene
OrganismCucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
DescriptionGlutathione transport system permease gsiD
Locationctg1041: 6120461 .. 6121484 (-)
RNA-Seq ExpressionCucsat.G2981
SyntenyCucsat.G2981
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTCGTTGAAGGGAACAAATTTTATTTTTATTTGTAAAATTTGCTATTTTTTTAAATAAAATAGAAAATAAAAATAAAGATGAAAGATTATCTAATCGTTCACTTCACATCCCTTCCTCACCTTTCCTCTTCATCTTCTTCCTCAAGGTTCAGAAATCCCTTAAAAATGGCGTAACAATCATTTCTCCATCTCTCCGCCGCTAAAATCACTTTTCACTATGAATTCCATTTTCTCCTCCATTCAATTCCGTCTTCTTCCATCACCAAATCCACGACAACCACAACATAATCTCCACATCTTCCACCAAATTTATCTTCCTCCACAAATAACCCACCGTTTCAGTTCAATAAAGACCAATTCAATTCTTCCAACTTCTCTAATTCTTGGAAACAGCACTATTCCTCCGTCGCAATCCGGCGACATTTCAGTCCTCCTCCCGATAAGGTTAGCCGAATTTCTCCTTACTCAGAATAAACTAATTAAAATTTCTTATTTGTGTTTTGGGTAATTTGTGCACAGCGGCGTGCTACTGATTGCGTATTTGCTAGCGAATTTCATTTTCCCGGAGTTTATTATGAAATCATACCGATCTGATGATGAGAACGACGGGAAGGGTGGAGGTGGAAGATGAAGAGAATGAAGCGGTAGAAGGAGATAATGAAACTTGAAGATTTAGCCATAAATTGAATTGAATTTAAGATTTGTGCGTAAGAAAATTGGGATAATGTGTATTGGAATATTCAGTGATTTGATTTTCCGATTTTGATCGAAAAGAGAAGTTCTTGTAGTTTATTTTTGCAAAATTTCATACATATTTGTGGAAAGGTAGAATCTAACAATGAATGAAGATGAAAATGAGGATGAAAGGTGGAGGGGAAGAGAGAGAGGAGAGAGGATAAGAAAGTGTCGTTACCGTCCTCCTAAATTCATTCTAATTTTTACATACTTTTTAAAATTTTAAATGTCTATTTCTTACTCCTAATATATTCTATCGATTATTAATATTTATTATTAATAGAAT

Coding sequence (CDS)

ATGAATTCCATTTTCTCCTCCATTCAATTCCGTCTTCTTCCATCACCAAATCCACGACAACCACAACATAATCTCCACATCTTCCACCAAATTTATCTTCCTCCACAAATAACCCACCGTTTCAGTTCAATAAAGACCAATTCAATTCTTCCAACTTCTCTAATTCTTGGAAACAGCACTATTCCTCCGTCGCAATCCGGCGACATTTCAGTCCTCCTCCCGATAAGCGGCGTGCTACTGATTGCGTATTTGCTAGCGAATTTCATTTTCCCGGAGTTTATTATGAAATCATACCGATCTGATGATGAGAACGACGGGAAGGGTGGAGGTGGAAGATGA

Protein sequence

MNSIFSSIQFRLLPSPNPRQPQHNLHIFHQIYLPPQITHRFSSIKTNSILPTSLILGNSTIPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGKGGGGR
Homology
BLAST of Cucsat.G2981 vs. NCBI nr
Match: KGN45072.1 (hypothetical protein Csa_016451 [Cucumis sativus])

HSP 1 Score: 222 bits (565), Expect = 6.98e-73
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0

Query: 1   MNSIFSSIQFRLLPSPNPRQPQHNLHIFHQIYLPPQITHRFSSIKTNSILPTSLILGNST 60
           MNSIFSSIQFRLLPSPNPRQPQHNLHIFHQIYLPPQITHRFSSIKTNSILPTSLILGNST
Sbjct: 1   MNSIFSSIQFRLLPSPNPRQPQHNLHIFHQIYLPPQITHRFSSIKTNSILPTSLILGNST 60

Query: 61  IPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGKGGGGR 112
           IPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGKGGGGR
Sbjct: 61  IPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGKGGGGR 112

BLAST of Cucsat.G2981 vs. NCBI nr
Match: KAA0067693.1 (Glutathione transport system permease gsiD [Cucumis melo var. makuwa] >TYJ98706.1 Glutathione transport system permease gsiD [Cucumis melo var. makuwa])

HSP 1 Score: 192 bits (489), Expect = 2.82e-61
Identity = 99/113 (87.61%), Postives = 107/113 (94.69%), Query Frame = 0

Query: 1   MNSIFSSIQFRLLPSPNPRQPQHNLHIFHQIYLPPQITHRFSSIKTNSILPT-SLILGNS 60
           MNSIFSSI+FRLLPSPNP QPQHNLHIFHQI+L PQ T+RF+SIKTNSILPT SLILGNS
Sbjct: 1   MNSIFSSIEFRLLPSPNPPQPQHNLHIFHQIHLSPQTTYRFNSIKTNSILPTNSLILGNS 60

Query: 61  TIPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGKGGGGR 112
           TIPP+QSGDISVLL  SGVLLIAYL+ANFIFPEFIMKSYRSDDE++GKGGGGR
Sbjct: 61  TIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESEGKGGGGR 113

BLAST of Cucsat.G2981 vs. NCBI nr
Match: XP_038897194.1 (uncharacterized protein LOC120085329 [Benincasa hispida])

HSP 1 Score: 129 bits (325), Expect = 5.31e-36
Identity = 79/116 (68.10%), Postives = 88/116 (75.86%), Query Frame = 0

Query: 1   MNSIFSSIQFRLLPS---PNPRQPQHN------LHIFHQIYLPPQITHRFSSIKTNSILP 60
           MN I SSI+F  L S   PN RQPQ N      LHIF  IY+ PQ T+RF S+K N+I P
Sbjct: 1   MNCISSSIEFPPLRSHLKPNRRQPQQNSPPKKNLHIFRHIYISPQ-TYRFDSLKVNAI-P 60

Query: 61  TSLILGNSTIPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGK 107
           +SLILGNSTIPPSQSGD+SVLL   GVLLIAYL+ANFI PEFIMKSYRSD E+DGK
Sbjct: 61  SSLILGNSTIPPSQSGDVSVLLQTGGVLLIAYLIANFILPEFIMKSYRSD-ESDGK 113

BLAST of Cucsat.G2981 vs. NCBI nr
Match: XP_022940449.1 (uncharacterized protein LOC111446047 [Cucurbita moschata] >KAG7037370.1 hypothetical protein SDJN02_00995 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 104 bits (259), Expect = 8.12e-26
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 0

Query: 1   MNSIFSSIQFRLLPS---PNPRQ-PQHNLHIFHQIYLPPQITHRFSSIKTNSILPTSLIL 60
           MN I S+I+  +L S   PN RQ  Q+N     +IY+ PQ ++RF+S+  N+I P SL+L
Sbjct: 18  MNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQ-SNRFASLTANAI-PNSLVL 77

Query: 61  GNSTIPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGK 107
            NSTIPPSQSGD+SVLL  SGVLLI YL+ANFI PEFIMKSY S DE++GK
Sbjct: 78  ANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSY-STDESEGK 125

BLAST of Cucsat.G2981 vs. NCBI nr
Match: KAG6585878.1 (hypothetical protein SDJN03_18611, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 104 bits (259), Expect = 1.43e-25
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 0

Query: 1   MNSIFSSIQFRLLPS---PNPRQ-PQHNLHIFHQIYLPPQITHRFSSIKTNSILPTSLIL 60
           MN I S+I+  +L S   PN RQ  Q+N     +IY+ PQ ++RF+S+  N+I P SL+L
Sbjct: 18  MNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQ-SNRFASLTANAI-PNSLVL 77

Query: 61  GNSTIPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGK 107
            NSTIPPSQSGD+SVLL  SGVLLI YL+ANFI PEFIMKSY S DE++GK
Sbjct: 78  ANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSY-STDESEGK 125

BLAST of Cucsat.G2981 vs. ExPASy TrEMBL
Match: A0A0A0K9M2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420170 PE=4 SV=1)

HSP 1 Score: 222 bits (565), Expect = 3.38e-73
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0

Query: 1   MNSIFSSIQFRLLPSPNPRQPQHNLHIFHQIYLPPQITHRFSSIKTNSILPTSLILGNST 60
           MNSIFSSIQFRLLPSPNPRQPQHNLHIFHQIYLPPQITHRFSSIKTNSILPTSLILGNST
Sbjct: 1   MNSIFSSIQFRLLPSPNPRQPQHNLHIFHQIYLPPQITHRFSSIKTNSILPTSLILGNST 60

Query: 61  IPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGKGGGGR 112
           IPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGKGGGGR
Sbjct: 61  IPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGKGGGGR 112

BLAST of Cucsat.G2981 vs. ExPASy TrEMBL
Match: A0A5D3BI04 (Glutathione transport system permease gsiD OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27427G00010 PE=4 SV=1)

HSP 1 Score: 192 bits (489), Expect = 1.37e-61
Identity = 99/113 (87.61%), Postives = 107/113 (94.69%), Query Frame = 0

Query: 1   MNSIFSSIQFRLLPSPNPRQPQHNLHIFHQIYLPPQITHRFSSIKTNSILPT-SLILGNS 60
           MNSIFSSI+FRLLPSPNP QPQHNLHIFHQI+L PQ T+RF+SIKTNSILPT SLILGNS
Sbjct: 1   MNSIFSSIEFRLLPSPNPPQPQHNLHIFHQIHLSPQTTYRFNSIKTNSILPTNSLILGNS 60

Query: 61  TIPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGKGGGGR 112
           TIPP+QSGDISVLL  SGVLLIAYL+ANFIFPEFIMKSYRSDDE++GKGGGGR
Sbjct: 61  TIPPAQSGDISVLLQTSGVLLIAYLIANFIFPEFIMKSYRSDDESEGKGGGGR 113

BLAST of Cucsat.G2981 vs. ExPASy TrEMBL
Match: A0A6J1FK57 (uncharacterized protein LOC111446047 OS=Cucurbita moschata OX=3662 GN=LOC111446047 PE=4 SV=1)

HSP 1 Score: 104 bits (259), Expect = 3.93e-26
Identity = 66/111 (59.46%), Postives = 82/111 (73.87%), Query Frame = 0

Query: 1   MNSIFSSIQFRLLPS---PNPRQ-PQHNLHIFHQIYLPPQITHRFSSIKTNSILPTSLIL 60
           MN I S+I+  +L S   PN RQ  Q+N     +IY+ PQ ++RF+S+  N+I P SL+L
Sbjct: 18  MNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPRIYISPQ-SNRFASLTANAI-PNSLVL 77

Query: 61  GNSTIPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGK 107
            NSTIPPSQSGD+SVLL  SGVLLI YL+ANFI PEFIMKSY S DE++GK
Sbjct: 78  ANSTIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSY-STDESEGK 125

BLAST of Cucsat.G2981 vs. ExPASy TrEMBL
Match: A0A6J1J030 (uncharacterized protein LOC111480699 OS=Cucurbita maxima OX=3661 GN=LOC111480699 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.55e-23
Identity = 65/111 (58.56%), Postives = 80/111 (72.07%), Query Frame = 0

Query: 1   MNSIFSSIQFRLLPS---PNPRQ-PQHNLHIFHQIYLPPQITHRFSSIKTNSILPTSLIL 60
           MN I S+I+  +L S   PN RQ  Q+N      IY+ PQ ++RF+S+  N+I P SL+L
Sbjct: 27  MNCITSAIELPVLRSHFKPNRRQRKQNNSQSQPPIYISPQ-SNRFASLTANAI-PNSLVL 86

Query: 61  GNSTIPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDENDGK 107
            N TIPPSQSGD+SVLL  SGVLLI YL+ANFI PEFIMKSY S DE++GK
Sbjct: 87  AN-TIPPSQSGDVSVLLQTSGVLLIVYLIANFIVPEFIMKSY-STDESEGK 133

BLAST of Cucsat.G2981 vs. ExPASy TrEMBL
Match: B9SV97 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1303160 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 2.61e-11
Identity = 36/73 (49.32%), Postives = 48/73 (65.75%), Query Frame = 0

Query: 36  QITHRFSSIKTNSILPTSLILGNSTIPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIM 95
           ++  R  S++TN++ P  LIL  ST  P+Q GDISVLLP  G+LL  Y +ANF+ P FI 
Sbjct: 36  KLDQRVLSVRTNAV-PNPLILAEST-SPAQGGDISVLLPTGGLLLFVYGIANFVVPFFIS 95

Query: 96  KSYRSDDENDGKG 108
           KS+ SD E +  G
Sbjct: 96  KSFESDKETEDSG 106

BLAST of Cucsat.G2981 vs. TAIR 10
Match: AT1G50732.1 (unknown protein. )

HSP 1 Score: 47.4 bits (111), Expect = 8.9e-06
Identity = 19/47 (40.43%), Postives = 32/47 (68.09%), Query Frame = 0

Query: 59  STIPPSQSGDISVLLPISGVLLIAYLLANFIFPEFIMKSYRSDDEND 106
           S +PPS+SGDI+  L +SG ++  YL+ NF+ P  + KS + ++E +
Sbjct: 67  SVLPPSESGDITTFLFVSGAMISMYLVTNFLVPSLLFKSLQGEEEEE 113

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KGN45072.16.98e-73100.00hypothetical protein Csa_016451 [Cucumis sativus][more]
KAA0067693.12.82e-6187.61Glutathione transport system permease gsiD [Cucumis melo var. makuwa] >TYJ98706.... [more]
XP_038897194.15.31e-3668.10uncharacterized protein LOC120085329 [Benincasa hispida][more]
XP_022940449.18.12e-2659.46uncharacterized protein LOC111446047 [Cucurbita moschata] >KAG7037370.1 hypothet... [more]
KAG6585878.11.43e-2559.46hypothetical protein SDJN03_18611, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A0A0K9M23.38e-73100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G420170 PE=4 SV=1[more]
A0A5D3BI041.37e-6187.61Glutathione transport system permease gsiD OS=Cucumis melo var. makuwa OX=119469... [more]
A0A6J1FK573.93e-2659.46uncharacterized protein LOC111446047 OS=Cucurbita moschata OX=3662 GN=LOC1114460... [more]
A0A6J1J0302.55e-2358.56uncharacterized protein LOC111480699 OS=Cucurbita maxima OX=3661 GN=LOC111480699... [more]
B9SV972.61e-1149.32Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1303160 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G50732.18.9e-0640.43unknown protein. [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37196TRANSMEMBRANE PROTEINcoord: 19..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsat.G2981.T1Cucsat.G2981.T1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane