Cucsat.G2895 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G2895
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	Histone H2A
Location	ctg1041: 4695437 .. 4697968 (-)
RNA-Seq Expression	Cucsat.G2895
Synteny	Cucsat.G2895

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCAAACCATAATTGTTATCTTCTCTATAACGATCAACGAATCACTTCCTAATCTCAACCGGAAAGCTGAGATGAGTTCTACTGAAGTTTCCACGAAGGGTGGCAGAGGCAAGAAAGCTTCCACCAAGTCTGTCTCCAGGTCTCACAAGGCTGGTCTCCAGTTCCCCGTCGGTCGTATCGCTAGGTACCTCAAGAAAGGTCGTTATGCTCAGCGTGTTGGCTCAGGCTCCCCGGTCTACCTCTCCGCCGTCCTTGAATACCTTGCTGCTGAGGTTTCTAATTGTTAACTTCACTTTGAGTGCAATTCTCTCAGTTTACAGTGTTCTGATTTAGGTCTTTTGTTTTTGTTTTAGGTTTTGGAGTTGGCGGGGAATGCTGCGAGGGACAACAAGAAGAACAGAATCATTCCAAGACACATCCAGCTTGCGGTGAGAAATGATGAGGAATTGAGCAAGCTTTTGGGATCGGTTACGATTGCAAGCGGAGGAGTGATGCCGAAGATCCATCAGTCTCTTTTGCCGAAGAAGGCCGGGAATGCGAAAGACAAAGCTGAAATTGGATCGGCGTCTCAGGAATTCTAGGTTATAGTAGAAGTTGCCGTTGATGAATATAAAATCAAATAGGTAGTGAGGTTATGTTAGATTTTGTCATTAACTTCAATGAATGAGTTCATTCTTCTTTTCGTTTGTAAATTTTGCGAATCGAACTGTGCTTAGATTTGTATCTGTCATCATCGTCGTTCAAATTTTATGTTATTCAGTGTAAATGGCGATGAAGTTCAACATTAATTGGAATTGAAAGAAATTATTTGAATTATATTTTGTTGGATGTTACCTTTTCTCATCAATCAAACAAGAACTACGAGATTTGTCCTCGTTGAAATTCAAAATCTTAAATGGTATTTTACTTAATTGGCCCTATTGAGTTCATACATATTTTCGAAAATACGCTAAATCAGATGCTTATTCGTTTGTTTTCGTTTCTCTCTCTGTATATAATATAGGATTTCTTCTTTAGGCCCTCCATATTTATTTTTCTCTGTCAAGTTTCGCATTCTCTAGGGTTTTGATTATCCGCCGGAAAAGATCGTACAATGAGTTCATCGGCTTCGACAAAGGGTGGTAGAGGGAAACCCAAAGCCACAAAGTCTGTGTCGCGGTCTCAGAAGGCTGGTCTACAGTTCCCTGTTGGTCGTATTGCTCGGTTTCTCAAGGCCGGTAAGTACGCGGAGCGTGTTGGTGCGGGTGCTCCCGTCTATCTCTCCGCCGTCCTCGAATATCTGGCCGCCGAGGTTAGTGCTTGATCTTCAAATCTGATCTTTTACCCGTTTCTCATTTGTTTGTCTTATAGTGTTGTTTTCCGATCACTTGAATCGGAGTTGTCATATTTTATTTAGTGTAGTTCCTTCTTCTTAGGCTCTGGAATTGATTTGTAGAAGAGAAATTTCATCTTCTGTTGATGATCAGTACAGAAGTGGATGAAGGTTTGTAATGATTTTGAAATCAGGGATTGGGATTGCATGAAATTGGAGTTACTATCACTGCTTTCAGAATAGTTATCTTGAGCTTTGAATTGTGGGCTTCTAATTGGTTATTAGTTTAAATTCAATGCACCTTAAAATAGTTTTGCTTACTGAATTAGGTCGTAAAGCCTCAAGATAACTTGGTTGTTTCTTTATGTTACGAAATCAACAAATAAAAAAAAGCAAAAAAGTGAAAACTGTGGAGAAATCAACACAGTGTGTTGGTTATGTTCCTGAGCAGAGGGAGAGATCAGATTTTATTTGAGAGTATCAGAGTCGCAATTAGTGTTAGATTGTTTATATAGGGCACCCCTCTAAACTATAGGACTAAAAACGTAAATAGCATAAATACAAGTACACATTAGGTTTTGTCGACATTGTCTTTGGGCCCCTTTTGAAGTGCGTCGCTCTTGAACTCTGGTTTACTAACTAGTCAGTGAGAAGTAATTGATGTTAGATTACACATTCAAGGCATTCTAATGCTTTAGATGAATGGAGTTTCATTTGAATTCATCCCGATAGTTTCTTAACGATAATGATGATTTTGTTTTGCATTTGAGGTAGCAATATATAGTAAAAAACTCCATTTGTAGGTGCTTGAGCTTGCAGGCAATGCCGCCAGAGACAACAAGAAGAATCGCATTGTTCCAAGACACATACAGCTTGCGGTCCGCAATGATGAAGAGTTAAGCAAGCTTTTGGGTGATGTGACAATTGCAAATGGTGGTGTGTTGCCTAATATCCATCAAACTCTTTTGCCTAAGAAGGCCGGATCAGGAAAAGGTGACATCGGATCTGCATCACAAGAGTTCTAAAAGTGTGATCATCTCCAAATTTTGATACACGAGGTATTAAGAGCGAAAATGGTTGTGGTTTCTTTGCCTTGTTTTGGAATTTATTTCATTATTGTGAACCACAGAAGACTGAATTTATTTATTTGGACATATAAATGAAACCATATTGTGTTTTAACCTAGTTTTTTTGCCTGCTTTGCTTGTTTGTTAATTAGGCTATAGGAATACACCATTCCCTTTTAAGATATCTGCATCAGGTTTGTGCCACTTACATCTTCATGAGCTGCTATTTTTTTACCTTTGTGCTTTGTGAAAAGGTTAGTCTTTACAATCAATCTTGAAAAGTGAAAAAACGGCTCTAGAAAGCAAAAAACAGATCAAACTCAAATTGACCTTAGGAATTCTTTTCTAGCACTAGCCACTAGAATAGGGACATGGAACGGATCACACGCCTCTCCTAGTAAGTTGTATCGAGAACCCGATGTATCTCTCTCTCATACTTGGTGTTACGGGTGTAATTGGTTTGGTTTGGCTTCAAACCAAACTGAACTACCAATTTATTAAGAATTATACGAAACTAAGCCGAATTGTGTAGAACCTGAACCAACCAACCGATCGTGTGGTTGGTTCAGTTTAGCGGTTCATTGCTTGGCTATTTGCAGGCACAAGAATAATGTGGGCAGGGCCTCAATCCCATTTGACAAACTTGGGGACCTTTTAACCAACTACACCAACCTCATGCTTTGGTATACTGGCTGGATTTGATTATATTTCTACTACCGGTTGGTTCGGTTTACTTTACTTTGTTATTTGACAAACTCGATCTCGGCCAAAAGCTTTCGTTTTTCTTTTCCATATTTTCAAACTGAAACAGCAGAACTGATCGGTTTTGACTCAACCTTGCAAGCGGATTTGGTTAGTTTATGCAGTTCTTTCTGTTTTTCCTTGCACTCCTACTTGGTGTCTTTACAAACACTATGTTGTGCTCTACTTTGTTTCCTTCTCTATCTTCCCTCTCTTCCCTGCTGTTAGGATCGGAATGTTTGGCTGGCTGCAGGAGCATATTCTGTTCATCAAGCGGATAATGCCGCTTGACTCGACCACATCCCAATTTCCCGTGGAAGTGAACTGATGCTGTTTCATTGTCCTCCGAGGATAGACATGCCTTGTTGTCTTGAAATTGTTCTCCTTCCCTCTCGTTTGCATGCTTCTTAACTGCCACATACAAATGTGGTTTGTTTTGAAGCACTTCATTCTAAAACTAGTGATAATGATGAAATTTGCAAACCAAAGTGTGGGTGACATTGATGATTAACACCGGAAGAATGCTTTAAAACTTTTAGGATAACTTTGATAATATTTGTTTCTCTTTGTTTCTATTTGGGTGTTATTGAGGAACAGAATGGTCGTCACAAGATGAGTCAACTTAATGACTTAGGTGATGACTCAGCTACAGGTGGCAAACTGACGTGGACACCGGGAGTTCTTCAAATATCAGATTAGTTATTCATCCTTTGCGAGTTTAGATATTCTACCCTCTCTAAGAAGAGAAACCATTGAATCATTTTGG

Coding sequence (CDS)

CAAACCATAATTGTTATCTTCTCTATAACGATCAACGAATCACTTCCTAATCTCAACCGGAAAGCTGAGATGAGTTCTACTGAAGTTTCCACGAAGGGTGGCAGAGGCAAGAAAGCTTCCACCAAGTCTGTCTCCAGGTCTCACAAGGCTGGTCTCCAGTTCCCCGTCGGTCGTATCGCTAGGTACCTCAAGAAAGGTCGTTATGCTCAGCGTGTTGGCTCAGGCTCCCCGGTCTACCTCTCCGCCGTCCTTGAATACCTTGCTGCTGAGGTTTTGGAGTTGGCGGGGAATGCTGCGAGGGACAACAAGAAGAACAGAATCATTCCAAGACACATCCAGCTTGCGGTGAGAAATGATGAGGAATTGAGCAAGCTTTTGGGATCGGTTACGATTGCAAGCGGAGGAGTGATGCCGAAGATCCATCAGTCTCTTTTGCCGAAGAAGGCCGGGAATGCGAAAGACAAAGCTGAAATTGGATCGGCGTCTCAGGAATTCTAG

Protein sequence

QTIIVIFSITINESLPNLNRKAEMSSTEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGNAKDKAEIGSASQEF

Homology

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BLAST of Cucsat.G2895 vs. ExPASy Swiss-Prot
Match: P35063 (Histone H2AX OS=Picea abies OX=3329 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 4.1e-56
Identity = 117/142 (82.39%), Postives = 129/142 (90.85%), Query Frame = 0


Query: 47  MSSTEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 106
           MSS+    KGGRGK  STKSVSRS KAGLQFPVGRIAR+LK G+YA+RVG+G+PVYL+AV
Sbjct: 1   MSSS--GAKGGRGKAKSTKSVSRSQKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAV 60

Query: 107 LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 166
           LEYLAAEVLELAGNAARDNKKNRI+PRHIQLAVRNDEELSKLLG+VTIA+GGV+P IHQ 
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGAVTIANGGVLPNIHQV 120

Query: 167 LLPKKAGNAKDKAEIGSASQEF 189
           LLPKK+G  KDK EIGSASQEF
Sbjct: 121 LLPKKSG--KDKGEIGSASQEF 138

[Close]

BLAST of Cucsat.G2895 vs. ExPASy Swiss-Prot
Match: O65759 (Histone H2AX OS=Cicer arietinum OX=3827 GN=HIS2A PE=2 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 5.3e-56
Identity = 117/142 (82.39%), Postives = 129/142 (90.85%), Query Frame = 0


Query: 47  MSSTEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 106
           MSST  +TKGGRGK  ++KSVSRS KAGLQFPVGRIAR+LK G+YA+RVG+G+PVYLSAV
Sbjct: 1   MSST-ATTKGGRGKPKASKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAV 60

Query: 107 LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 166
           LEYLAAEVLELAGNAARDNK NRI+PRHIQLAVRNDEELSKLLGSVTIA+GGV+P IHQ+
Sbjct: 61  LEYLAAEVLELAGNAARDNKNNRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQT 120

Query: 167 LLPKKAGNAKDKAEIGSASQEF 189
           LLPKK G  K K EIGSASQEF
Sbjct: 121 LLPKKVG--KGKGEIGSASQEF 139

[Close]

BLAST of Cucsat.G2895 vs. ExPASy Swiss-Prot
Match: A2ZL69 (Probable histone H2AXb OS=Oryza sativa subsp. indica OX=39946 GN=OsI_037312 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.2e-55
Identity = 112/133 (84.21%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 56  GGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVL 115
           GGRGK   +KSVSRS KAGLQFPVGRIARYLK G+YA+RVG+G+PVYLSAVLEYLAAEVL
Sbjct: 8   GGRGKSKGSKSVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVL 67

Query: 116 ELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGNA 175
           ELAGNAARDNKKNRI+PRHIQLAVRNDEELS+LLG+VTIA+GGV+P IHQ+LLPKK G  
Sbjct: 68  ELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKGG-- 127

Query: 176 KDKAEIGSASQEF 189
           KDKA+IGSASQEF
Sbjct: 128 KDKADIGSASQEF 138

[Close]

BLAST of Cucsat.G2895 vs. ExPASy Swiss-Prot
Match: Q2QPG9 (Probable histone H2AXb OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0530000 PE=2 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 1.2e-55
Identity = 112/133 (84.21%), Postives = 124/133 (93.23%), Query Frame = 0


Query: 56  GGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAAEVL 115
           GGRGK   +KSVSRS KAGLQFPVGRIARYLK G+YA+RVG+G+PVYLSAVLEYLAAEVL
Sbjct: 8   GGRGKSKGSKSVSRSSKAGLQFPVGRIARYLKAGKYAERVGAGAPVYLSAVLEYLAAEVL 67

Query: 116 ELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKAGNA 175
           ELAGNAARDNKKNRI+PRHIQLAVRNDEELS+LLG+VTIA+GGV+P IHQ+LLPKK G  
Sbjct: 68  ELAGNAARDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNIHQTLLPKKGG-- 127

Query: 176 KDKAEIGSASQEF 189
           KDKA+IGSASQEF
Sbjct: 128 KDKADIGSASQEF 138

[Close]

BLAST of Cucsat.G2895 vs. ExPASy Swiss-Prot
Match: O04848 (Probable histone H2AXa OS=Arabidopsis thaliana OX=3702 GN=At1g08880 PE=1 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 3.4e-55
Identity = 112/136 (82.35%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 53  STKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAA 112
           +TKGGRGK  +TKSVSRS KAGLQFPVGRIAR+LK G+YA+RVG+G+PVYLSAVLEYLAA
Sbjct: 9   TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAA 68

Query: 113 EVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKA 172
           EVLELAGNAARDNKK RI+PRHIQLAVRNDEELSKLLGSVTIA+GGV+P IHQ+LLP K 
Sbjct: 69  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKV 128

Query: 173 GNAKDKAEIGSASQEF 189
           G  K+K +IGSASQEF
Sbjct: 129 G--KNKGDIGSASQEF 142

[Close]

BLAST of Cucsat.G2895 vs. NCBI nr
Match: XP_004148882.1 (histone H2AX [Cucumis sativus] >KGN44845.1 hypothetical protein Csa_016006 [Cucumis sativus])

HSP 1 Score: 271 bits (694), Expect = 8.69e-91
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 47  MSSTEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 106
           MSSTEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV
Sbjct: 1   MSSTEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60

Query: 107 LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 166
           LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120

Query: 167 LLPKKAGNAKDKAEIGSASQEF 188
           LLPKKAGNAKDKAEIGSASQEF
Sbjct: 121 LLPKKAGNAKDKAEIGSASQEF 142

[Close]

BLAST of Cucsat.G2895 vs. NCBI nr
Match: XP_008451416.1 (PREDICTED: histone H2AX-like [Cucumis melo])

HSP 1 Score: 270 bits (691), Expect = 2.49e-90
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 47  MSSTEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 106
           MSSTEVSTKGGRG+KASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV
Sbjct: 1   MSSTEVSTKGGRGRKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60

Query: 107 LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 166
           LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120

Query: 167 LLPKKAGNAKDKAEIGSASQEF 188
           LLPKKAGNAKDKAEIGSASQEF
Sbjct: 121 LLPKKAGNAKDKAEIGSASQEF 142

[Close]

BLAST of Cucsat.G2895 vs. NCBI nr
Match: XP_022953582.1 (histone H2AX-like [Cucurbita moschata])

HSP 1 Score: 266 bits (681), Expect = 1.17e-88
Identity = 139/150 (92.67%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 39  PNLNRKAEMSSTEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSG 98
           P   RK +MSS +V TKGGRGKK+  KSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSG
Sbjct: 3   PFHRRKVKMSSNDVPTKGGRGKKSDAKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSG 62

Query: 99  SPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGG 158
           SPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGG
Sbjct: 63  SPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGG 122

Query: 159 VMPKIHQSLLPKKAGNAKDKAEIGSASQEF 188
           VMPKIHQSLLPKKAGNAKDKAEIGSASQEF
Sbjct: 123 VMPKIHQSLLPKKAGNAKDKAEIGSASQEF 152

[Close]

BLAST of Cucsat.G2895 vs. NCBI nr
Match: XP_038896926.1 (histone H2AX-like [Benincasa hispida])

HSP 1 Score: 265 bits (676), Expect = 4.80e-88
Identity = 136/142 (95.77%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 47  MSSTEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 106
           MSST++  KGGRG+KASTKSVSRSHKAGLQFPVGR+ARYLKKGRYAQRVGSGSPVYLSAV
Sbjct: 1   MSSTDIPAKGGRGRKASTKSVSRSHKAGLQFPVGRVARYLKKGRYAQRVGSGSPVYLSAV 60

Query: 107 LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 166
           LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120

Query: 167 LLPKKAGNAKDKAEIGSASQEF 188
           LLPKKAGNAKDKAEIGSASQEF
Sbjct: 121 LLPKKAGNAKDKAEIGSASQEF 142

[Close]

BLAST of Cucsat.G2895 vs. NCBI nr
Match: KAG6575875.1 (Histone H2AX, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 262 bits (670), Expect = 3.94e-87
Identity = 136/142 (95.77%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 47  MSSTEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 106
           MSST+V TKGGRGKK++ KSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV
Sbjct: 1   MSSTDVPTKGGRGKKSAAKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60

Query: 107 LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 166
           LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120

Query: 167 LLPKKAGNAKDKAEIGSASQEF 188
           LLPKKAGNAK+KAEIGSASQEF
Sbjct: 121 LLPKKAGNAKNKAEIGSASQEF 142

[Close]

BLAST of Cucsat.G2895 vs. ExPASy TrEMBL
Match: A0A0A0K525 (Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_7G390240 PE=3 SV=1)

HSP 1 Score: 271 bits (694), Expect = 4.21e-91
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 47  MSSTEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 106
           MSSTEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV
Sbjct: 1   MSSTEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60

Query: 107 LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 166
           LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120

Query: 167 LLPKKAGNAKDKAEIGSASQEF 188
           LLPKKAGNAKDKAEIGSASQEF
Sbjct: 121 LLPKKAGNAKDKAEIGSASQEF 142

[Close]

BLAST of Cucsat.G2895 vs. ExPASy TrEMBL
Match: A0A1S3BRH7 (Histone H2A OS=Cucumis melo OX=3656 GN=LOC103492716 PE=3 SV=1)

HSP 1 Score: 270 bits (691), Expect = 1.21e-90
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 47  MSSTEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 106
           MSSTEVSTKGGRG+KASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV
Sbjct: 1   MSSTEVSTKGGRGRKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60

Query: 107 LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 166
           LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS
Sbjct: 61  LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 120

Query: 167 LLPKKAGNAKDKAEIGSASQEF 188
           LLPKKAGNAKDKAEIGSASQEF
Sbjct: 121 LLPKKAGNAKDKAEIGSASQEF 142

[Close]

BLAST of Cucsat.G2895 vs. ExPASy TrEMBL
Match: A0A6J1GNM4 (Histone H2A OS=Cucurbita moschata OX=3662 GN=LOC111456076 PE=3 SV=1)

HSP 1 Score: 266 bits (681), Expect = 5.65e-89
Identity = 139/150 (92.67%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 39  PNLNRKAEMSSTEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSG 98
           P   RK +MSS +V TKGGRGKK+  KSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSG
Sbjct: 3   PFHRRKVKMSSNDVPTKGGRGKKSDAKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSG 62

Query: 99  SPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGG 158
           SPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGG
Sbjct: 63  SPVYLSAVLEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGG 122

Query: 159 VMPKIHQSLLPKKAGNAKDKAEIGSASQEF 188
           VMPKIHQSLLPKKAGNAKDKAEIGSASQEF
Sbjct: 123 VMPKIHQSLLPKKAGNAKDKAEIGSASQEF 152

[Close]

BLAST of Cucsat.G2895 vs. ExPASy TrEMBL
Match: A0A6J1L0A1 (Histone H2A OS=Cucurbita maxima OX=3661 GN=LOC111497905 PE=3 SV=1)

HSP 1 Score: 253 bits (647), Expect = 6.09e-84
Identity = 130/142 (91.55%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 47  MSSTEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 106
           MSST+V  K GRGKK++TKSV+RSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV
Sbjct: 1   MSSTDVPAKAGRGKKSATKSVTRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 60

Query: 107 LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 166
           LEYLAAEVLELAGNAARDNKK RI+PRHIQLAVRNDEELSKLLGSVTIASGGV+PKIHQS
Sbjct: 61  LEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIASGGVLPKIHQS 120

Query: 167 LLPKKAGNAKDKAEIGSASQEF 188
           LLPKKAG+ KDKAEIGSASQEF
Sbjct: 121 LLPKKAGSTKDKAEIGSASQEF 142

[Close]

BLAST of Cucsat.G2895 vs. ExPASy TrEMBL
Match: A0A6J1HB52 (Histone H2A OS=Cucurbita moschata OX=3662 GN=LOC111461202 PE=3 SV=1)

HSP 1 Score: 252 bits (644), Expect = 1.74e-83
Identity = 129/142 (90.85%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 47  MSSTEVSTKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAV 106
           MSST+V  KGGRGKK++ KSV+RSHKAGLQFPVGRIARYLKKGR+AQRVGSGSPVYLSAV
Sbjct: 1   MSSTDVPAKGGRGKKSAAKSVTRSHKAGLQFPVGRIARYLKKGRFAQRVGSGSPVYLSAV 60

Query: 107 LEYLAAEVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQS 166
           LEYLAAEVLELAGNAARDNKK RI+PRHIQLAVRNDEELSKLLGSVTIASGGV+PKIHQS
Sbjct: 61  LEYLAAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIASGGVLPKIHQS 120

Query: 167 LLPKKAGNAKDKAEIGSASQEF 188
           LLPKKAG+ KDKAEIGSASQEF
Sbjct: 121 LLPKKAGSTKDKAEIGSASQEF 142

[Close]

BLAST of Cucsat.G2895 vs. TAIR 10
Match: AT1G08880.1 (Histone superfamily protein )

HSP 1 Score: 216.1 bits (549), Expect = 2.4e-56
Identity = 112/136 (82.35%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 53  STKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAA 112
           +TKGGRGK  +TKSVSRS KAGLQFPVGRIAR+LK G+YA+RVG+G+PVYLSAVLEYLAA
Sbjct: 9   TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKSGKYAERVGAGAPVYLSAVLEYLAA 68

Query: 113 EVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKA 172
           EVLELAGNAARDNKK RI+PRHIQLAVRNDEELSKLLGSVTIA+GGV+P IHQ+LLP K 
Sbjct: 69  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKV 128

Query: 173 GNAKDKAEIGSASQEF 189
           G  K+K +IGSASQEF
Sbjct: 129 G--KNKGDIGSASQEF 142

[Close]

BLAST of Cucsat.G2895 vs. TAIR 10
Match: AT1G54690.1 (gamma histone variant H2AX )

HSP 1 Score: 215.7 bits (548), Expect = 3.2e-56
Identity = 112/136 (82.35%), Postives = 125/136 (91.91%), Query Frame = 0


Query: 53  STKGGRGKKASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAA 112
           +TKGGRGK  +TKSVSRS KAGLQFPVGRIAR+LK G+YA+RVG+G+PVYLSAVLEYLAA
Sbjct: 9   TTKGGRGKPKATKSVSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLSAVLEYLAA 68

Query: 113 EVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKA 172
           EVLELAGNAARDNKK RI+PRHIQLAVRNDEELSKLLGSVTIA+GGV+P IHQ+LLP K 
Sbjct: 69  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGSVTIANGGVLPNIHQTLLPSKV 128

Query: 173 GNAKDKAEIGSASQEF 189
           G  K+K +IGSASQEF
Sbjct: 129 G--KNKGDIGSASQEF 142

[Close]

BLAST of Cucsat.G2895 vs. TAIR 10
Match: AT4G27230.1 (histone H2A 2 )

HSP 1 Score: 190.7 bits (483), Expect = 1.1e-48
Identity = 100/128 (78.12%), Postives = 112/128 (87.50%), Query Frame = 0


Query: 57  GRGKK----ASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAA 116
           GRGK+    A+ KS SRS KAGLQFPVGRIAR+LK G+YA+RVG+G+PVYL+AVLEYLAA
Sbjct: 3   GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 117 EVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKA 176
           EVLELAGNAARDNKK RI+PRHIQLAVRNDEELSKLLG VTIA+GGVMP IH  LLPKKA
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122

Query: 177 GNAKDKAE 181
           G++K   E
Sbjct: 123 GSSKPTEE 130

[Close]

BLAST of Cucsat.G2895 vs. TAIR 10
Match: AT4G27230.2 (histone H2A 2 )

HSP 1 Score: 190.7 bits (483), Expect = 1.1e-48
Identity = 100/128 (78.12%), Postives = 112/128 (87.50%), Query Frame = 0


Query: 57  GRGKK----ASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAA 116
           GRGK+    A+ KS SRS KAGLQFPVGRIAR+LK G+YA+RVG+G+PVYL+AVLEYLAA
Sbjct: 3   GRGKQLGSGAAKKSTSRSSKAGLQFPVGRIARFLKAGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 117 EVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKA 176
           EVLELAGNAARDNKK RI+PRHIQLAVRNDEELSKLLG VTIA+GGVMP IH  LLPKKA
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKA 122

Query: 177 GNAKDKAE 181
           G++K   E
Sbjct: 123 GSSKPTEE 130

[Close]

BLAST of Cucsat.G2895 vs. TAIR 10
Match: AT1G51060.1 (histone H2A 10 )

HSP 1 Score: 188.3 bits (477), Expect = 5.5e-48
Identity = 98/128 (76.56%), Postives = 111/128 (86.72%), Query Frame = 0


Query: 57  GRGKK----ASTKSVSRSHKAGLQFPVGRIARYLKKGRYAQRVGSGSPVYLSAVLEYLAA 116
           GRGK     ++ K+ +RS KAGLQFPVGRIAR+LKKG+YA+RVG+G+PVYL+AVLEYLAA
Sbjct: 3   GRGKTLGSGSAKKATTRSSKAGLQFPVGRIARFLKKGKYAERVGAGAPVYLAAVLEYLAA 62

Query: 117 EVLELAGNAARDNKKNRIIPRHIQLAVRNDEELSKLLGSVTIASGGVMPKIHQSLLPKKA 176
           EVLELAGNAARDNKK RI+PRHIQLAVRNDEELSKLLG VTIA+GGVMP IH  LLPKK 
Sbjct: 63  EVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIANGGVMPNIHNLLLPKKT 122

Query: 177 GNAKDKAE 181
           G +K  AE
Sbjct: 123 GASKPSAE 130

The following BLAST results are available for this feature:

BLAST of Cucsat.G2895 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35063	4.1e-56	82.39	Histone H2AX OS=Picea abies OX=3329 PE=2 SV=1	[more]
O65759	5.3e-56	82.39	Histone H2AX OS=Cicer arietinum OX=3827 GN=HIS2A PE=2 SV=1	[more]
A2ZL69	1.2e-55	84.21	Probable histone H2AXb OS=Oryza sativa subsp. indica OX=39946 GN=OsI_037312 PE=3...	[more]
Q2QPG9	1.2e-55	84.21	Probable histone H2AXb OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0530000 ...	[more]
O04848	3.4e-55	82.35	Probable histone H2AXa OS=Arabidopsis thaliana OX=3702 GN=At1g08880 PE=1 SV=1	[more]

BLAST of Cucsat.G2895 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148882.1	8.69e-91	100.00	histone H2AX [Cucumis sativus] >KGN44845.1 hypothetical protein Csa_016006 [Cucu...	[more]
XP_008451416.1	2.49e-90	99.30	PREDICTED: histone H2AX-like [Cucumis melo]	[more]
XP_022953582.1	1.17e-88	92.67	histone H2AX-like [Cucurbita moschata]	[more]
XP_038896926.1	4.80e-88	95.77	histone H2AX-like [Benincasa hispida]	[more]
KAG6575875.1	3.94e-87	95.77	Histone H2AX, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cucsat.G2895 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K525	4.21e-91	100.00	Histone H2A OS=Cucumis sativus OX=3659 GN=Csa_7G390240 PE=3 SV=1	[more]
A0A1S3BRH7	1.21e-90	99.30	Histone H2A OS=Cucumis melo OX=3656 GN=LOC103492716 PE=3 SV=1	[more]
A0A6J1GNM4	5.65e-89	92.67	Histone H2A OS=Cucurbita moschata OX=3662 GN=LOC111456076 PE=3 SV=1	[more]
A0A6J1L0A1	6.09e-84	91.55	Histone H2A OS=Cucurbita maxima OX=3661 GN=LOC111497905 PE=3 SV=1	[more]
A0A6J1HB52	1.74e-83	90.85	Histone H2A OS=Cucurbita moschata OX=3662 GN=LOC111461202 PE=3 SV=1	[more]

BLAST of Cucsat.G2895 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G08880.1	2.4e-56	82.35	Histone superfamily protein	[more]
AT1G54690.1	3.2e-56	82.35	gamma histone variant H2AX	[more]
AT4G27230.1	1.1e-48	78.13	histone H2A 2	[more]
AT4G27230.2	1.1e-48	78.13	histone H2A 2	[more]
AT1G51060.1	5.5e-48	76.56	histone H2A 10	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 47..62 score: 84.58 coord: 62..75 score: 89.46 coord: 18..40 score: 69.94 coord: 76..90 score: 75.49 coord: 104..122 score: 70.38
IPR002119	Histone H2A	SMART	SM00414	h2a4	coord: 7..127 e-value: 1.3E-77 score: 273.8
IPR002119	Histone H2A	CDD	cd00074	H2A	coord: 12..124 e-value: 7.86117E-68 score: 198.713
IPR032454	Histone H2A, C-terminal domain	PFAM	PF16211	Histone_H2A_C	coord: 96..129 e-value: 1.3E-18 score: 66.4
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 5..131 e-value: 1.3E-63 score: 214.6
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 21..124
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 13..93 e-value: 7.8E-15 score: 55.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR23430	HISTONE H2A	coord: 4..137
None	No IPR available	PANTHER	PTHR23430:SF288	HISTONE H2A	coord: 4..137
IPR032458	Histone H2A conserved site	PROSITE	PS00046	HISTONE_H2A	coord: 26..32

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G2895.T7	Cucsat.G2895.T7	mRNA
Cucsat.G2895.T1	Cucsat.G2895.T1	mRNA
Cucsat.G2895.T3	Cucsat.G2895.T3	mRNA
Cucsat.G2895.T2	Cucsat.G2895.T2	mRNA
Cucsat.G2895.T9	Cucsat.G2895.T9	mRNA
Cucsat.G2895.T8	Cucsat.G2895.T8	mRNA
Cucsat.G2895.T10	Cucsat.G2895.T10	mRNA
Cucsat.G2895.T4	Cucsat.G2895.T4	mRNA
Cucsat.G2895.T5	Cucsat.G2895.T5	mRNA
Cucsat.G2895.T6	Cucsat.G2895.T6	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031507	heterochromatin assembly
cellular_component	GO:0000786	nucleosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046982	protein heterodimerization activity