Cucsat.G2834 (gene) Cucumber (B10) v3

Overview


Name	Cucsat.G2834
Type	gene
Organism	Cucumis sativus L. var. sativus cv B10 (Cucumber (B10) v3)
Description	AAI domain-containing protein
Location	ctg1041: 3318126 .. 3319037 (-)
RNA-Seq Expression	Cucsat.G2834
Synteny	Cucsat.G2834

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTCTTCTTTCTCCTCCTTTCTCTTTCAATAACTCATATATAAATACACACACACACATACATGTATATCAAAATCTCCAACCTCTCATATTCACATACAAACACAAACAATAACAAACCAAAGTTTTCTAGCTACACTCACACAATGGAGATGGCTCAAAAGGTGACGGTGATGGTGGTGCTGATACTAGTTGGCTTAGCAGGAATATCGATAGCGATGGAAGTTTGCGGCGTCGACGAGGATGGTCTCACAGCATGCAAGCCGTGGGTAACGAAACCGTGCCCTGCCGAGATGCCACCGGCCGCTTGTTGCAATAAACTCTCCAATGCTGACTTTGATTGCTTTTGCAAATATAAGAACTCAATGTTGCTATCCTCATTTGGGATTGATTCTGACCTTGCTCTTGCCTTGCCAGTCAAGTGCAACATTCCTAACACTCCCACTTGCTCTGCTTAAACCTTAAGGAAAATAAATATTTATGAGGTTTGGATTTTTTTTTTGTTTTAGTTCTCATTTGAGCTTAGGATTTTTTTTGGTCCTGTTTTGTTAAATATTTGGTTGTTATTTATTTTTTAAATTTAGGTTTATATATGTTAGTATTTGTTTTAATTTGTGTGTTTTTGTTTGTGCAGTGTGTAGGTGAAAGTACAATGGTGGAGAAGACCATAATGTATTGGGTCTCACTTATCTTAATGTTTAATTGTATTTCTTTTTTCTACTTAAAAGGGAAAAAAAAATGTAATTTTCTAATTTGAATTTTATTTCCAAATGTAATAGTAATCGGTAATTTATCCACTTAATGCTTCACTATTCTAATTTTATTTTGTCAAATACAATAATTAATATTTTTCTTTTCAATTTAACTTTTTAGAATATATTTATTTAAGTTTAAACCTGTTTTTTTTATGCAT

Coding sequence (CDS)

ATGTATATCAAAATCTCCAACCTCTCATATTCACATACAAACACAAACAATAACAAACCAAAGTTTTCTAGCTACACTCACACAATGGAGATGGCTCAAAAGGTGACGGTGATGGTGGTGCTGATACTAGTTGGCTTAGCAGGAATATCGATAGCGATGGAAGTTTGCGGCGTCGACGAGGATGGTCTCACAGCATGCAAGCCGTGGGTAACGAAACCGTGCCCTGCCGAGATGCCACCGGCCGCTTGTTGCAATAAACTCTCCAATGCTGACTTTGATTGCTTTTGCAAATATAAGAACTCAATGTTGCTATCCTCATTTGGGATTGATTCTGACCTTGCTCTTGCCTTGCCAGTCAAGTGCAACATTCCTAACACTCCCACTTGCTCTGCTTAA

Protein sequence

MYIKISNLSYSHTNTNNNKPKFSSYTHTMEMAQKVTVMVVLILVGLAGISIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNKLSNADFDCFCKYKNSMLLSSFGIDSDLALALPVKCNIPNTPTCSA

Homology

[Close]

BLAST of Cucsat.G2834 vs. ExPASy Swiss-Prot
Match: Q8W453 (Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.0e-17
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 0


Query: 32  AQKVTVMVVLILVGLAGISIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNKLSNAD 91
           A  V + +++I+  L   S+A+++CG+ +D L  CKP V+K  P   P   CC  L +AD
Sbjct: 6   AAMVMMAMIVIMAMLVDTSVAIDLCGMSQDELNECKPAVSKENPTS-PSQPCCTALQHAD 65

Query: 92  FDCFCKYKNSMLLSSFGIDSDLALALPVKCNIPNTPTC 130
           F C C YKNS  L SFG+D +LA ALP +C + N PTC
Sbjct: 66  FACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPTC 102

[Close]

BLAST of Cucsat.G2834 vs. NCBI nr
Match: KAE8646276.1 (hypothetical protein Csa_016013 [Cucumis sativus])

HSP 1 Score: 265 bits (676), Expect = 3.34e-89
Identity = 130/130 (100.00%), Postives = 130/130 (100.00%), Query Frame = 0


Query: 1   MYIKISNLSYSHTNTNNNKPKFSSYTHTMEMAQKVTVMVVLILVGLAGISIAMEVCGVDE 60
           MYIKISNLSYSHTNTNNNKPKFSSYTHTMEMAQKVTVMVVLILVGLAGISIAMEVCGVDE
Sbjct: 1   MYIKISNLSYSHTNTNNNKPKFSSYTHTMEMAQKVTVMVVLILVGLAGISIAMEVCGVDE 60

Query: 61  DGLTACKPWVTKPCPAEMPPAACCNKLSNADFDCFCKYKNSMLLSSFGIDSDLALALPVK 120
           DGLTACKPWVTKPCPAEMPPAACCNKLSNADFDCFCKYKNSMLLSSFGIDSDLALALPVK
Sbjct: 61  DGLTACKPWVTKPCPAEMPPAACCNKLSNADFDCFCKYKNSMLLSSFGIDSDLALALPVK 120

Query: 121 CNIPNTPTCS 130
           CNIPNTPTCS
Sbjct: 121 CNIPNTPTCS 130

[Close]

BLAST of Cucsat.G2834 vs. NCBI nr
Match: KAA0041998.1 (putative lipid-transfer protein DIR1 [Cucumis melo var. makuwa] >TYK17933.1 putative lipid-transfer protein DIR1 [Cucumis melo var. makuwa])

HSP 1 Score: 187 bits (476), Expect = 4.24e-59
Identity = 89/103 (86.41%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 29  MEMAQKVTVMVVLILVGLAGISIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS 88
           MEMA KV +M V+ILVG+AGISIAME+CGVDE+GLTACKPWVTKPCP EMPPA CCNKLS
Sbjct: 1   MEMALKVKIMAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS 60

Query: 89  NADFDCFCKYKNSMLLSSFGIDSDLALALPVKCNIPNTPTCSA 131
           NADF CFCKYKNSMLLSSFGID DLALALPVKCNI NTPTCS+
Sbjct: 61  NADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCSS 103

[Close]

BLAST of Cucsat.G2834 vs. NCBI nr
Match: XP_008447223.1 (PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo])

HSP 1 Score: 185 bits (470), Expect = 3.49e-58
Identity = 88/103 (85.44%), Postives = 94/103 (91.26%), Query Frame = 0


Query: 29  MEMAQKVTVMVVLILVGLAGISIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS 88
           MEMA KV +  V+ILVG+AGISIAME+CGVDE+GLTACKPWVTKPCP EMPPA CCNKLS
Sbjct: 1   MEMALKVKITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS 60

Query: 89  NADFDCFCKYKNSMLLSSFGIDSDLALALPVKCNIPNTPTCSA 131
           NADF CFCKYKNSMLLSSFGID DLALALPVKCNI NTPTCS+
Sbjct: 61  NADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCSS 103

[Close]

BLAST of Cucsat.G2834 vs. NCBI nr
Match: XP_022156089.1 (putative lipid-transfer protein DIR1 [Momordica charantia])

HSP 1 Score: 140 bits (354), Expect = 1.63e-40
Identity = 67/103 (65.05%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 29  MEMAQKVTVMVVLI--LVGLAGISIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNK 88
           MEM + V  + V +  LV LAGIS A+ VCGVDEDGLTACKPWVTKPCP + PP ACCN 
Sbjct: 1   MEMTRTVAALAVAVAVLVSLAGISGAVNVCGVDEDGLTACKPWVTKPCPTDPPPVACCNG 60

Query: 89  LSNADFDCFCKYKNSMLLSSFGIDSDLALALPVKCNIPNTPTC 129
           LS ADF CFC YKNS++L S GI+ +LALALP KC +P+ P C
Sbjct: 61  LSKADFGCFCNYKNSLVLPSLGIEPNLALALPAKCGLPSAPPC 103

[Close]

BLAST of Cucsat.G2834 vs. NCBI nr
Match: KAG6593049.1 (putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 140 bits (352), Expect = 2.82e-40
Identity = 65/102 (63.73%), Postives = 80/102 (78.43%), Query Frame = 0


Query: 28  TMEMAQKVTVMVVLILVGLAGISIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNKL 87
           TM MA     M +++LV L+G    M+VCGV +DGLTACKPWVTKPCP E+PPAACC+ L
Sbjct: 2   TMAMA-----MTMVMLVSLSGALAEMDVCGVSQDGLTACKPWVTKPCPTELPPAACCDGL 61

Query: 88  SNADFDCFCKYKNSMLLSSFGIDSDLALALPVKCNIPNTPTC 129
           S ADF CFC YK+S++L S GID DLALALP KC++PN+P+C
Sbjct: 62  SKADFGCFCNYKHSLVLPSLGIDPDLALALPAKCSLPNSPSC 98

[Close]

BLAST of Cucsat.G2834 vs. ExPASy TrEMBL
Match: A0A0A0K4Q7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G372360 PE=4 SV=1)

HSP 1 Score: 209 bits (532), Expect = 5.94e-68
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0


Query: 29  MEMAQKVTVMVVLILVGLAGISIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS 88
           MEMAQKVTVMVVLILVGLAGISIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS
Sbjct: 1   MEMAQKVTVMVVLILVGLAGISIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS 60

Query: 89  NADFDCFCKYKNSMLLSSFGIDSDLALALPVKCNIPNTPTCS 130
           NADFDCFCKYKNSMLLSSFGIDSDLALALPVKCNIPNTPTCS
Sbjct: 61  NADFDCFCKYKNSMLLSSFGIDSDLALALPVKCNIPNTPTCS 102

[Close]

BLAST of Cucsat.G2834 vs. ExPASy TrEMBL
Match: A0A5D3D158 (Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002300 PE=4 SV=1)

HSP 1 Score: 187 bits (476), Expect = 2.05e-59
Identity = 89/103 (86.41%), Postives = 95/103 (92.23%), Query Frame = 0


Query: 29  MEMAQKVTVMVVLILVGLAGISIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS 88
           MEMA KV +M V+ILVG+AGISIAME+CGVDE+GLTACKPWVTKPCP EMPPA CCNKLS
Sbjct: 1   MEMALKVKIMAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS 60

Query: 89  NADFDCFCKYKNSMLLSSFGIDSDLALALPVKCNIPNTPTCSA 131
           NADF CFCKYKNSMLLSSFGID DLALALPVKCNI NTPTCS+
Sbjct: 61  NADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCSS 103

[Close]

BLAST of Cucsat.G2834 vs. ExPASy TrEMBL
Match: A0A1S3BHS9 (putative lipid-transfer protein DIR1 OS=Cucumis melo OX=3656 GN=LOC103489717 PE=4 SV=1)

HSP 1 Score: 185 bits (470), Expect = 1.69e-58
Identity = 88/103 (85.44%), Postives = 94/103 (91.26%), Query Frame = 0


Query: 29  MEMAQKVTVMVVLILVGLAGISIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNKLS 88
           MEMA KV +  V+ILVG+AGISIAME+CGVDE+GLTACKPWVTKPCP EMPPA CCNKLS
Sbjct: 1   MEMALKVKITAVVILVGIAGISIAMEMCGVDEEGLTACKPWVTKPCPTEMPPATCCNKLS 60

Query: 89  NADFDCFCKYKNSMLLSSFGIDSDLALALPVKCNIPNTPTCSA 131
           NADF CFCKYKNSMLLSSFGID DLALALPVKCNI NTPTCS+
Sbjct: 61  NADFSCFCKYKNSMLLSSFGIDPDLALALPVKCNITNTPTCSS 103

[Close]

BLAST of Cucsat.G2834 vs. ExPASy TrEMBL
Match: A0A6J1DS99 (putative lipid-transfer protein DIR1 OS=Momordica charantia OX=3673 GN=LOC111023061 PE=4 SV=1)

HSP 1 Score: 140 bits (354), Expect = 7.89e-41
Identity = 67/103 (65.05%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 29  MEMAQKVTVMVVLI--LVGLAGISIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNK 88
           MEM + V  + V +  LV LAGIS A+ VCGVDEDGLTACKPWVTKPCP + PP ACCN 
Sbjct: 1   MEMTRTVAALAVAVAVLVSLAGISGAVNVCGVDEDGLTACKPWVTKPCPTDPPPVACCNG 60

Query: 89  LSNADFDCFCKYKNSMLLSSFGIDSDLALALPVKCNIPNTPTC 129
           LS ADF CFC YKNS++L S GI+ +LALALP KC +P+ P C
Sbjct: 61  LSKADFGCFCNYKNSLVLPSLGIEPNLALALPAKCGLPSAPPC 103

[Close]

BLAST of Cucsat.G2834 vs. ExPASy TrEMBL
Match: A0A6J1GPI5 (putative lipid-transfer protein DIR1 OS=Cucurbita moschata OX=3662 GN=LOC111456291 PE=4 SV=1)

HSP 1 Score: 140 bits (352), Expect = 1.50e-40
Identity = 66/99 (66.67%), Postives = 81/99 (81.82%), Query Frame = 0


Query: 32  AQKVTVMVVLILVGLAGISIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNKLSNAD 91
           A KV VMV++  V LA +++A++VCGV++DGL ACKPWV KPCP E+PP ACC+ LS AD
Sbjct: 5   APKVVVMVMV--VSLAEMAMAVDVCGVNKDGLKACKPWVMKPCPTELPPTACCDGLSKAD 64

Query: 92  FDCFCKYKNSMLLSSFGIDSDLALALPVKCNIPNTPTCS 130
             CFCKYK+SMLLSS GID DLAL LP KC++PNTP+CS
Sbjct: 65  LGCFCKYKHSMLLSSLGIDLDLALGLPAKCSLPNTPSCS 101

[Close]

BLAST of Cucsat.G2834 vs. TAIR 10
Match: AT5G48485.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 90.1 bits (222), Expect = 1.4e-18
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 0


Query: 32  AQKVTVMVVLILVGLAGISIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNKLSNAD 91
           A  V + +++I+  L   S+A+++CG+ +D L  CKP V+K  P   P   CC  L +AD
Sbjct: 6   AAMVMMAMIVIMAMLVDTSVAIDLCGMSQDELNECKPAVSKENPTS-PSQPCCTALQHAD 65

Query: 92  FDCFCKYKNSMLLSSFGIDSDLALALPVKCNIPNTPTC 130
           F C C YKNS  L SFG+D +LA ALP +C + N PTC
Sbjct: 66  FACLCGYKNSPWLGSFGVDPELASALPKQCGLANAPTC 102

[Close]

BLAST of Cucsat.G2834 vs. TAIR 10
Match: AT5G48490.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 2.2e-16
Identity = 41/100 (41.00%), Postives = 64/100 (64.00%), Query Frame = 0


Query: 32  AQKVTVMVVLILVGLAGI--SIAMEVCGVDEDGLTACKPWVTKPCPAEMPPAACCNKLSN 91
           ++KV +MV+++++    +  S+A+++CG+ +  L  C P V+K  P   P   CCN L +
Sbjct: 3   SKKVAIMVIVMVMASLVVERSVAIDLCGMTQAELNECLPAVSKNNPTS-PSLLCCNALKH 62

Query: 92  ADFDCFCKYKNSMLLSSFGIDSDLALALPVKCNIPNTPTC 130
           AD+ C C YKNS  L SFG+D  LA +LP +C++ N PTC
Sbjct: 63  ADYTCLCGYKNSPWLGSFGVDPKLASSLPKECDLTNAPTC 101

The following BLAST results are available for this feature:

BLAST of Cucsat.G2834 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W453	2.0e-17	44.90	Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=...	[more]

BLAST of Cucsat.G2834 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646276.1	3.34e-89	100.00	hypothetical protein Csa_016013 [Cucumis sativus]	[more]
KAA0041998.1	4.24e-59	86.41	putative lipid-transfer protein DIR1 [Cucumis melo var. makuwa] >TYK17933.1 puta...	[more]
XP_008447223.1	3.49e-58	85.44	PREDICTED: putative lipid-transfer protein DIR1 [Cucumis melo]	[more]
XP_022156089.1	1.63e-40	65.05	putative lipid-transfer protein DIR1 [Momordica charantia]	[more]
KAG6593049.1	2.82e-40	63.73	putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. sor...	[more]

BLAST of Cucsat.G2834 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K4Q7	5.94e-68	100.00	AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G372360 PE=4 SV...	[more]
A0A5D3D158	2.05e-59	86.41	Putative lipid-transfer protein DIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BHS9	1.69e-58	85.44	putative lipid-transfer protein DIR1 OS=Cucumis melo OX=3656 GN=LOC103489717 PE=...	[more]
A0A6J1DS99	7.89e-41	65.05	putative lipid-transfer protein DIR1 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A6J1GPI5	1.50e-40	66.67	putative lipid-transfer protein DIR1 OS=Cucurbita moschata OX=3662 GN=LOC1114562...	[more]

BLAST of Cucsat.G2834 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48485.1	1.4e-18	44.90	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT5G48490.1	2.2e-16	41.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (B10) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 66..129 e-value: 3.4E-5 score: 33.2
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 52..129 e-value: 1.5E-9 score: 37.9
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 52..129 e-value: 4.6E-19 score: 70.1
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 56..130
None	No IPR available	PANTHER	PTHR33122:SF63	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 34..129
IPR039265	Putative lipid-transfer protein DIR1-like	PANTHER	PTHR33122	LIPID BINDING PROTEIN-RELATED	coord: 34..129
IPR044741	Non-specific lipid-transfer protein-like	CDD	cd04660	nsLTP_like	coord: 56..128 e-value: 4.5283E-16 score: 65.8534

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsat.G2834.T1	Cucsat.G2834.T1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009627	systemic acquired resistance
molecular_function	GO:0005504	fatty acid binding